Rmu_sc0003610.1_g000041

Phosphatidylinositol 4-kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003610.1
Physical Location & Seq
Forward (+)
181969 .. 183846
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003610.1_g000041.1.cds

Sequence Viewer

Length: 1878 bp
atgcctactaagttggagagtcctgttaagacgcagatggctgtgggacttgtcagcggtctgctcaacagtgagtgccgtgagagcacaagaggaattcttgctcggaggaggcgtgtctttgtgcagactgagactggctgtgttttgggaatggacttggaaaggggtgacaatgccaacacagttaaaaggaggttgcagcttgccctcaatgtacctactgaccacagctctttgacattcggggatcgaatattgaataacgatctaagtgccatccgcaatcattccccgctactacttgcaaggaatgtcatgcatagaagttcctcaactccttgtctctcacctactgggagaaatcttcaacattgggatcggagtggtcctattgagattctagggtgttcaaagtacttcgctagtattgatgaactgattaaggacatagtggtggctatcaagaagggcgttgaaccaatacctgttcatagtgggcttggtggtgcttactacttcaggaacatcaggggtgagagtgttgccattgtgaaaccaacagatgaggagccatatgcacccaacaaccccaaaggctttgtaggcacatctcttgggctgccaggcctgaagcattcagtgagagttggggaaacagggtttcgagaagttgctgcctaccttttggatgccaatcactatgctaatgtgcctccaactgttcttgttaaggtgacacattcaatcttcaatgttaattatggtgtcaatggagacaagattcagcagaagaaaaaggttagtaaaattgcatctctgcagcagttcatccgtcatgactttgatgctggtgactatggaacctcaagttttcctgtagctggtgttcacagaataggcattttagatattaggatctttaatactgacaggcatgcaggaaacattctggttaaaatgcccgatggggagtttggtcaggtggagctcattcccatagatcatggcctttgcttgcctgagcacttggaagatccctattttgaatggattcattggcctcaagcttcaattcctttctcagaggacgagcttgagtatataaagaatcttgatccaatccgtgattctgagatgctcaagatggaactacccatgattcgtgaggcatgtcttcgagttctggtcctctccacaatattcctccaggaagcagctgcttttggactttgccttgctgaaataggtgaaatgatgagcagggagtttggaagcaaagaggagaagccaagtgaacttgaggttgtatgccttgagaccaggaggatcataacagattcgaacacgtcaaactttgtggctgaagaagacaacaatcagtgtctgtctgatatagagtgcgataaagcagggcttgatccttctcctcagatcccatgtttcctcttcaagcagttttcatatccctttggacctgatggtgctaatggtcactacttacttcctaagctagatgagagtttggaagaggatattgttgacttggatacaagggcaatcagaactgagggaatcattacccagccaaattggtataaaactgaaactgtttcgaagttgtccatgtctctgaaaaagttaaatgtggacgagacaagccagctacagcggaagggtaccttacctggaatcagaagaagtgcatttgaccagttacccacctcaacaggctttgtgaaacttgctgatatgtgtgaggaggaatgggttctgttcctcgaaaagtttagggaacttctttaccctgcccttggcaaacgaaggtctaccaccattgggcagagaaggaggcttggcacatcatgcaccttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

625

Amino Acids

69.91

Weight (kDa)

5.92

Isoelectric Point (pI)

54.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013673)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1679
AccB1I GGYRCC 1 cut(s) 1679
AccI GTMKAC 1 cut(s) 1829
AciI CCGC 4 cut(s) 57, 283, 296, 1672
AclWI GGATC 8 cut(s) 258, 387, 926, 1031, 1112, 1337, 1415, 1429
AcsI RAATTY 1 cut(s) 96
AcuI CTGAAG 3 cut(s) 505, 653, 1386
AfaI GTAC 3 cut(s) 219, 419, 1681
AfiI CCNNNNNNNGG 3 cut(s) 884, 1814, 1839
AflIII ACRYGT 1 cut(s) 1347
AgsI TTSAA 9 cut(s) 262, 371, 414, 479, 747, 754, 1049, 1074, 1453
AjiI CACGTC 1 cut(s) 1350
AjnI CCWGG 4 cut(s) 625, 1209, 1322, 1687
AjuI GAANNNNNNNTTGG 2 cut(s) 1114, 1146
AluBI AGCT 9 cut(s) 205, 234, 884, 991, 1070, 1096, 1220, 1513, 1666
AluI AGCT 9 cut(s) 205, 234, 884, 991, 1070, 1096, 1220, 1513, 1666
Alw21I GWGCWC 3 cut(s) 89, 993, 1029
Alw26I GTCTC 6 cut(s) 128, 350, 771, 1313, 1635, 1649
AlwI GGATC 8 cut(s) 258, 387, 926, 1031, 1112, 1337, 1415, 1429
AlwNI CAGNNNCTG 1 cut(s) 1387
AoxI GGCC 3 cut(s) 628, 1009, 1061
ApeKI GCWGC 6 cut(s) 202, 622, 677, 823, 1217, 1220
ApoI RAATTY 1 cut(s) 96
Asp700I GAANNNNTTC 2 cut(s) 1053, 1770
Asp718I GGTACC 1 cut(s) 1679
AspS9I GGNCC 3 cut(s) 389, 1189, 1475
AsuHPI GGTGA 6 cut(s) 182, 342, 548, 748, 866, 1262
AsuII TTCGAA 2 cut(s) 1343, 1616
AvaII GGWCC 3 cut(s) 389, 1189, 1475
BanI GGYRCC 1 cut(s) 1679
BanII GRGCYC 1 cut(s) 993
BbsI GAAGAC 2 cut(s) 1169, 1377
Bbv12I GWGCWC 3 cut(s) 89, 993, 1029
BbvI GCAGC 6 cut(s) 214, 609, 664, 835, 1207, 1229
BccI CCATC 5 cut(s) 31, 287, 962, 1141, 1475
BceAI ACGGC 1 cut(s) 63
BcgI CGANNNNNNTGC 2 cut(s) 257, 291
BciT130I CCWGG 4 cut(s) 627, 1211, 1324, 1689
BciVI GTATCC 1 cut(s) 1543
BcoDI GTCTC 6 cut(s) 128, 350, 771, 1313, 1635, 1649
BfaI CTAG 3 cut(s) 404, 426, 1514
BfmI CTRYAG 3 cut(s) 821, 879, 1667
BfuI GTATCC 1 cut(s) 1543
BisI GCNGC 6 cut(s) 203, 623, 678, 824, 1218, 1221
BlsI GCNGC 6 cut(s) 204, 624, 679, 825, 1219, 1222
BmcAI AGTACT 1 cut(s) 419
Bme1390I CCNGG 4 cut(s) 627, 1211, 1324, 1689
Bme18I GGWCC 3 cut(s) 389, 1189, 1475
BmgBI CACGTC 1 cut(s) 1350
BmgT120I GGNCC 3 cut(s) 389, 1189, 1475
BmiI GGNNCC 3 cut(s) 573, 865, 1681
BmrFI CCNGG 4 cut(s) 627, 1211, 1324, 1689
BmrI ACTGGG 1 cut(s) 366
BmsI GCATC 4 cut(s) 682, 824, 838, 1128
BmuI ACTGGG 1 cut(s) 366
BpiI GAAGAC 2 cut(s) 1169, 1377
BpmI CTGGAG 1 cut(s) 1193
Bpu10I CCTNAGC 2 cut(s) 1023, 1509
Bpu14I TTCGAA 2 cut(s) 1343, 1616
BpuEI CTTGAG 6 cut(s) 853, 1050, 1118, 1127, 1322, 1337
BsaBI GATNNNNATC 1 cut(s) 696
BsaI GGTCTC 1 cut(s) 1313
BsaJI CCNNGG 1 cut(s) 1813
BsaXI ACNNNNNCTCC 2 cut(s) 100, 130
Bsc4I CCNNNNNNNGG 3 cut(s) 884, 1814, 1839
Bse1I ACTGG 3 cut(s) 142, 361, 1714
Bse8I GATNNNNATC 1 cut(s) 696
BseBI CCWGG 4 cut(s) 627, 1211, 1324, 1689
BseDI CCNNGG 1 cut(s) 1813
BseGI GGATG 3 cut(s) 279, 697, 831
BseJI GATNNNNATC 1 cut(s) 696
BseLI CCNNNNNNNGG 3 cut(s) 884, 1814, 1839
BseMII CTCAG 6 cut(s) 123, 1014, 1098, 1125, 1445, 1560
BseNI ACTGG 3 cut(s) 142, 361, 1714
BseRI GAGGAG 5 cut(s) 124, 584, 1298, 1419, 1775
BseXI GCAGC 6 cut(s) 214, 609, 664, 835, 1207, 1229
BseYI CCCAGC 1 cut(s) 1584
BsgI GTGCAG 1 cut(s) 146
BshFI GGCC 3 cut(s) 630, 1011, 1063
BshNI GGYRCC 1 cut(s) 1679
BsiHKAI GWGCWC 3 cut(s) 89, 993, 1029
BslFI GGGAC 1 cut(s) 60
BslI CCNNNNNNNGG 3 cut(s) 884, 1814, 1839
BsmAI GTCTC 6 cut(s) 128, 350, 771, 1313, 1635, 1649
BsmFI GGGAC 1 cut(s) 60
BsmI GAATGC 1 cut(s) 637
BsnI GGCC 3 cut(s) 630, 1011, 1063
Bso31I GGTCTC 1 cut(s) 1313
Bsp119I TTCGAA 2 cut(s) 1343, 1616
Bsp1286I GDGCHC 3 cut(s) 89, 993, 1029
BspACI CCGC 4 cut(s) 57, 283, 296, 1672
BspANI GGCC 3 cut(s) 630, 1011, 1063
BspCNI CTCAG 6 cut(s) 124, 1015, 1097, 1126, 1444, 1561
BspHI TCATGA 1 cut(s) 838
BspLI GGNNCC 3 cut(s) 573, 865, 1681
BspMAI CTGCAG 1 cut(s) 825
BspPI GGATC 8 cut(s) 258, 387, 926, 1031, 1112, 1337, 1415, 1429
BspT104I TTCGAA 2 cut(s) 1343, 1616
BspT107I GGYRCC 1 cut(s) 1679
BspTNI GGTCTC 1 cut(s) 1313
BsrI ACTGG 3 cut(s) 142, 361, 1714
BssECI CCNNGG 1 cut(s) 1813
BssT1I CCWWGG 1 cut(s) 1813
Bst2UI CCWGG 4 cut(s) 627, 1211, 1324, 1689
Bst4CI ACNGT 4 cut(s) 71, 187, 724, 1612
Bst6I CTCTTC 2 cut(s) 1454, 1524
BstAPI GCANNNNNTGC 1 cut(s) 1866
BstBI TTCGAA 2 cut(s) 1343, 1616
BstC8I GCNNGC 4 cut(s) 207, 939, 1019, 1664
BstDEI CTNAG 9 cut(s) 9, 132, 272, 1023, 1084, 1134, 1431, 1509, 1569
BstF5I GGATG 3 cut(s) 279, 697, 831
BstMAI GTCTC 6 cut(s) 128, 350, 771, 1313, 1635, 1649
BstMWI GCNNNNNNNGC 3 cut(s) 84, 606, 1866
BstNI CCWGG 4 cut(s) 627, 1211, 1324, 1689
BstNSI RCATGY 2 cut(s) 941, 1176
BstSCI CCNGG 4 cut(s) 625, 1209, 1322, 1687
BstSFI CTRYAG 3 cut(s) 821, 879, 1667
BstV1I GCAGC 6 cut(s) 214, 609, 664, 835, 1207, 1229
BstV2I GAAGAC 2 cut(s) 1169, 1377
BstX2I RGATCY 3 cut(s) 918, 1036, 1434
BstYI RGATCY 3 cut(s) 918, 1036, 1434
BsuI GTATCC 1 cut(s) 1543
BsuRI GGCC 3 cut(s) 630, 1011, 1063
BtrI CACGTC 1 cut(s) 1350
BtsCI GGATG 3 cut(s) 279, 697, 831
BtsIMutI CAGTG 3 cut(s) 76, 648, 1388
Cac8I GCNNGC 4 cut(s) 207, 939, 1019, 1664
CaiI CAGNNNCTG 1 cut(s) 1387
CciI TCATGA 1 cut(s) 838
Cfr13I GGNCC 3 cut(s) 389, 1189, 1475
CseI GACGC 1 cut(s) 40
Csp6I GTAC 3 cut(s) 218, 418, 1680
CspCI CAANNNNNGTGG 2 cut(s) 1341, 1376
CviAII CATG 9 cut(s) 319, 839, 938, 1007, 1159, 1173, 1440, 1627, 1866
CviQI GTAC 3 cut(s) 218, 418, 1680
DdeI CTNAG 9 cut(s) 9, 132, 272, 1023, 1084, 1134, 1431, 1509, 1569
Eam1104I CTCTTC 2 cut(s) 1454, 1524
EarI CTCTTC 2 cut(s) 1454, 1524
Ecl136II GAGCTC 1 cut(s) 991
Eco130I CCWWGG 1 cut(s) 1813
Eco147I AGGCCT 1 cut(s) 630
Eco24I GRGCYC 1 cut(s) 993
Eco31I GGTCTC 1 cut(s) 1313
Eco47I GGWCC 3 cut(s) 389, 1189, 1475
Eco53kI GAGCTC 1 cut(s) 991
Eco57I CTGAAG 3 cut(s) 505, 653, 1386
EcoICRI GAGCTC 1 cut(s) 991
EcoRI GAATTC 1 cut(s) 96
EcoRII CCWGG 4 cut(s) 625, 1209, 1322, 1687
EcoT14I CCWWGG 1 cut(s) 1813
EcoT22I ATGCAT 1 cut(s) 324
EcoT38I GRGCYC 1 cut(s) 993
ErhI CCWWGG 1 cut(s) 1813
FaeI CATG 9 cut(s) 322, 842, 941, 1010, 1162, 1176, 1443, 1630, 1869
FalI AAGNNNNNCTT 4 cut(s) 1401, 1433, 1667, 1699
FaqI GGGAC 1 cut(s) 60
FatI CATG 9 cut(s) 318, 838, 937, 1006, 1158, 1172, 1439, 1626, 1865
FauI CCCGC 1 cut(s) 303
FauNDI CATATG 1 cut(s) 577
FblI GTMKAC 1 cut(s) 1829
Fnu4HI GCNGC 6 cut(s) 203, 623, 678, 824, 1218, 1221
FokI GGATG 3 cut(s) 266, 704, 818
FriOI GRGCYC 1 cut(s) 993
Fsp4HI GCNGC 6 cut(s) 203, 623, 678, 824, 1218, 1221
FspBI CTAG 3 cut(s) 404, 426, 1514
GluI GCNGC 6 cut(s) 203, 623, 678, 824, 1218, 1221
GsaI CCCAGC 1 cut(s) 1588
GsuI CTGGAG 1 cut(s) 1193
HaeIII GGCC 3 cut(s) 630, 1011, 1063
HgaI GACGC 1 cut(s) 40
Hin1II CATG 9 cut(s) 322, 842, 941, 1010, 1162, 1176, 1443, 1630, 1869
HincII GTYRAC 1 cut(s) 1543
HindII GTYRAC 1 cut(s) 1543
HindIII AAGCTT 1 cut(s) 1068
HphI GGTGA 6 cut(s) 182, 342, 548, 748, 866, 1262
Hpy166II GTNNAC 5 cut(s) 892, 1298, 1543, 1651, 1830
Hpy188I TCNGA 9 cut(s) 108, 384, 1087, 1135, 1393, 1434, 1565, 1635, 1697
Hpy188III TCNNGA 7 cut(s) 466, 523, 668, 839, 1115, 1144, 1166
Hpy8I GTNNAC 5 cut(s) 892, 1298, 1543, 1651, 1830
HpyAV CCTTC 5 cut(s) 463, 1434, 1669, 1818, 1842
HpyCH4III ACNGT 4 cut(s) 71, 187, 724, 1612
HpyCH4IV ACGT 1 cut(s) 1349
HpyF10VI GCNNNNNNNGC 3 cut(s) 84, 606, 1866
HpyF3I CTNAG 9 cut(s) 9, 132, 272, 1023, 1084, 1134, 1431, 1509, 1569
HpySE526I ACGT 1 cut(s) 1349
Hsp92II CATG 9 cut(s) 322, 842, 941, 1010, 1162, 1176, 1443, 1630, 1869
KpnI GGTACC 1 cut(s) 1683
LmnI GCTCC 2 cut(s) 571, 988
Lsp1109I GCAGC 6 cut(s) 214, 609, 664, 835, 1207, 1229
LweI GCATC 4 cut(s) 682, 824, 838, 1128
MaeI CTAG 3 cut(s) 404, 426, 1514
MaeII ACGT 1 cut(s) 1349
MaeIII GTNAC 5 cut(s) 170, 736, 854, 1493, 1716
MflI RGATCY 3 cut(s) 918, 1036, 1434
MhlI GDGCHC 3 cut(s) 89, 993, 1029
MluCI AATT 5 cut(s) 96, 760, 810, 1074, 1591
MlyI GAGTC 1 cut(s) 28
MmeI TCCRAC 1 cut(s) 743
Mph1103I ATGCAT 1 cut(s) 324
MroXI GAANNNNTTC 2 cut(s) 1053, 1770
MseI TTAA 8 cut(s) 27, 189, 444, 732, 759, 924, 957, 1643
MslI CAYNNNNRTG 1 cut(s) 455
MspA1I CMGCKG 3 cut(s) 57, 1220, 1672
MspR9I CCNGG 4 cut(s) 627, 1211, 1324, 1689
Mva1269I GAATGC 1 cut(s) 637
MvaI CCWGG 4 cut(s) 627, 1211, 1324, 1689
MwoI GCNNNNNNNGC 3 cut(s) 84, 606, 1866
NdeI CATATG 1 cut(s) 577
NlaIII CATG 9 cut(s) 322, 842, 941, 1010, 1162, 1176, 1443, 1630, 1869
NlaIV GGNNCC 3 cut(s) 573, 865, 1681
NmuCI GTSAC 4 cut(s) 170, 736, 854, 1493
NsiI ATGCAT 1 cut(s) 324
NspI RCATGY 2 cut(s) 941, 1176
NspV TTCGAA 2 cut(s) 1343, 1616
PaeI GCATGC 1 cut(s) 941
PagI TCATGA 1 cut(s) 838
PceI AGGCCT 1 cut(s) 630
PcsI WCGNNNNNNNCGW 1 cut(s) 112
PctI GAATGC 1 cut(s) 637
PdmI GAANNNNTTC 2 cut(s) 1053, 1770
PfeI GAWTC 9 cut(s) 400, 784, 1054, 1111, 1130, 1162, 1340, 1575, 1692
PfoI TCCNGGA 1 cut(s) 1209
PkrI GCNGC 6 cut(s) 204, 624, 679, 825, 1219, 1222
PleI GAGTC 1 cut(s) 27
PpsI GAGTC 1 cut(s) 27
Psp124BI GAGCTC 1 cut(s) 993
Psp6I CCWGG 4 cut(s) 625, 1209, 1322, 1687
PspFI CCCAGC 1 cut(s) 1584
PspGI CCWGG 4 cut(s) 625, 1209, 1322, 1687
PspN4I GGNNCC 3 cut(s) 573, 865, 1681
PspPI GGNCC 3 cut(s) 389, 1189, 1475
PsrI GAACNNNNNNTAC 2 cut(s) 873, 905
PstI CTGCAG 1 cut(s) 825
PstNI CAGNNNCTG 1 cut(s) 1387
PsuI RGATCY 3 cut(s) 918, 1036, 1434
PvuII CAGCTG 1 cut(s) 1220
RsaI GTAC 3 cut(s) 219, 419, 1681
RsaNI GTAC 3 cut(s) 218, 418, 1680
RseI CAYNNNNRTG 1 cut(s) 455
SacI GAGCTC 1 cut(s) 993
SaqAI TTAA 8 cut(s) 27, 189, 444, 732, 759, 924, 957, 1643
SatI GCNGC 6 cut(s) 203, 623, 678, 824, 1218, 1221
Sau96I GGNCC 3 cut(s) 389, 1189, 1475
ScaI AGTACT 1 cut(s) 419
SchI GAGTC 1 cut(s) 28
ScrFI CCNGG 4 cut(s) 627, 1211, 1324, 1689
SduI GDGCHC 3 cut(s) 89, 993, 1029
SfaNI GCATC 4 cut(s) 682, 824, 838, 1128
SfcI CTRYAG 3 cut(s) 821, 879, 1667
SfuI TTCGAA 2 cut(s) 1343, 1616
SinI GGWCC 3 cut(s) 389, 1189, 1475
SmiMI CAYNNNNRTG 1 cut(s) 455
SmlI CTYRAG 6 cut(s) 868, 1065, 1097, 1142, 1301, 1316
SmoI CTYRAG 6 cut(s) 868, 1065, 1097, 1142, 1301, 1316
SphI GCATGC 1 cut(s) 941
Sse9I AATT 5 cut(s) 96, 760, 810, 1074, 1591
SseBI AGGCCT 1 cut(s) 630
SsiI CCGC 4 cut(s) 57, 283, 296, 1672
SspI AATATT 2 cut(s) 258, 1203
SspMI CTAG 3 cut(s) 404, 426, 1514
SstI GAGCTC 1 cut(s) 993
StuI AGGCCT 1 cut(s) 630
StyD4I CCNGG 4 cut(s) 625, 1209, 1322, 1687
StyI CCWWGG 1 cut(s) 1813
TaaI ACNGT 4 cut(s) 71, 187, 724, 1612
TaiI ACGT 1 cut(s) 1352
TaqI TCGA 6 cut(s) 253, 667, 1180, 1343, 1616, 1782
TasI AATT 5 cut(s) 96, 760, 810, 1074, 1591
TatI WGTACW 1 cut(s) 417
TfiI GAWTC 9 cut(s) 400, 784, 1054, 1111, 1130, 1162, 1340, 1575, 1692
Tru1I TTAA 8 cut(s) 27, 189, 444, 732, 759, 924, 957, 1643
Tru9I TTAA 8 cut(s) 27, 189, 444, 732, 759, 924, 957, 1643
TscAI CASTG 3 cut(s) 76, 648, 1388
TseFI GTSAC 4 cut(s) 170, 736, 854, 1493
TseI GCWGC 6 cut(s) 202, 622, 677, 823, 1217, 1220
Tsp45I GTSAC 4 cut(s) 170, 736, 854, 1493
TspDTI ATGAA 5 cut(s) 450, 482, 820, 1046, 1452
TspGWI ACGGA 2 cut(s) 824, 1115
TspRI CASTG 3 cut(s) 76, 648, 1388
VpaK11BI GGWCC 3 cut(s) 389, 1189, 1475
XapI RAATTY 1 cut(s) 96
XceI RCATGY 2 cut(s) 941, 1176
XmiI GTMKAC 1 cut(s) 1829
XmnI GAANNNNTTC 2 cut(s) 1053, 1770
XspI CTAG 3 cut(s) 404, 426, 1514
ZrmI AGTACT 1 cut(s) 419
Zsp2I ATGCAT 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.