GATA transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26150 AT5G56860 |
| fragaria_vesca | FvH4_1g07390 |
| malus_domestica | MD02G1078700.v1.1 MD15G1206700.v1.1 |
| prunus_persica | Prupe.7G210100_v2.0.a1 |
| pyrus_communis | pycom02g06290 pycom15g18310 |
| rosa_chinensis | RchiOBHm_Chr2g0093271 |
| rosa_laevigata | RLG00000016385 |
| rosa_multiflora | Rmu_sc0003724.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00148320 |
| rosa_rugosa | Rorug02G0034100 |
| rosa_samantha | Rh2AG080400 Rh2BG081400 Rh2CG083800 Rh2DG079300 |
| rosa_wichuraiana | Rw2G006660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 633 |
| AbsI | CCTCGAGG | 1 cut(s) | 840 |
| AccB1I | GGYRCC | 2 cut(s) | 742, 810 |
| AccII | CGCG | 1 cut(s) | 704 |
| AciI | CCGC | 8 cut(s) | 255, 660, 685, 695, 702, 704, 731, 740 |
| AclWI | GGATC | 4 cut(s) | 265, 413, 438, 985 |
| AcsI | RAATTY | 2 cut(s) | 663, 901 |
| AcyI | GRCGYC | 1 cut(s) | 743 |
| AfaI | GTAC | 3 cut(s) | 304, 358, 475 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 577, 733, 1000 |
| AflII | CTTAAG | 1 cut(s) | 151 |
| AgsI | TTSAA | 6 cut(s) | 88, 215, 512, 802, 956, 1025 |
| AjnI | CCWGG | 1 cut(s) | 726 |
| AleI | CACNNNNGTG | 1 cut(s) | 613 |
| AluBI | AGCT | 8 cut(s) | 22, 161, 223, 326, 523, 555, 862, 986 |
| AluI | AGCT | 8 cut(s) | 22, 161, 223, 326, 523, 555, 862, 986 |
| Alw21I | GWGCWC | 1 cut(s) | 24 |
| AlwI | GGATC | 4 cut(s) | 265, 413, 438, 985 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 523, 911 |
| Ama87I | CYCGRG | 1 cut(s) | 840 |
| AoxI | GGCC | 2 cut(s) | 687, 1002 |
| ApeKI | GCWGC | 7 cut(s) | 458, 523, 698, 707, 710, 888, 986 |
| ApoI | RAATTY | 2 cut(s) | 663, 901 |
| AspLEI | GCGC | 2 cut(s) | 745, 911 |
| AspS9I | GGNCC | 5 cut(s) | 173, 626, 635, 687, 1003 |
| AsuC2I | CCSGG | 1 cut(s) | 428 |
| AsuHPI | GGTGA | 5 cut(s) | 62, 305, 528, 781, 828 |
| AsuII | TTCGAA | 1 cut(s) | 395 |
| AvaI | CYCGRG | 1 cut(s) | 840 |
| AvaII | GGWCC | 3 cut(s) | 173, 626, 635 |
| BanI | GGYRCC | 2 cut(s) | 742, 810 |
| BanII | GRGCYC | 1 cut(s) | 24 |
| BauI | CACGAG | 2 cut(s) | 360, 480 |
| BbsI | GAAGAC | 2 cut(s) | 384, 860 |
| Bbv12I | GWGCWC | 1 cut(s) | 24 |
| BbvI | GCAGC | 7 cut(s) | 445, 510, 710, 719, 722, 900, 973 |
| BccI | CCATC | 2 cut(s) | 538, 754 |
| BceAI | ACGGC | 1 cut(s) | 733 |
| BciT130I | CCWGG | 1 cut(s) | 728 |
| BclI | TGATCA | 8 cut(s) | 43, 49, 64, 184, 235, 265, 331, 753 |
| BcnI | CCSGG | 1 cut(s) | 428 |
| BfaI | CTAG | 4 cut(s) | 95, 138, 227, 630 |
| BfmI | CTRYAG | 1 cut(s) | 193 |
| BfoI | RGCGCY | 2 cut(s) | 746, 912 |
| BfrI | CTTAAG | 1 cut(s) | 151 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 695 |
| BlpI | GCTNAGC | 1 cut(s) | 23 |
| BmcAI | AGTACT | 2 cut(s) | 358, 475 |
| Bme1390I | CCNGG | 2 cut(s) | 428, 728 |
| Bme18I | GGWCC | 3 cut(s) | 173, 626, 635 |
| BmeT110I | CYCGRG | 1 cut(s) | 840 |
| BmgT120I | GGNCC | 5 cut(s) | 173, 626, 635, 687, 1003 |
| BmiI | GGNNCC | 4 cut(s) | 6, 547, 744, 812 |
| BmrFI | CCNGG | 2 cut(s) | 428, 728 |
| BmsI | GCATC | 1 cut(s) | 535 |
| BpiI | GAAGAC | 2 cut(s) | 384, 860 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 23 |
| Bpu14I | TTCGAA | 1 cut(s) | 395 |
| BpuEI | CTTGAG | 3 cut(s) | 38, 147, 954 |
| BpuMI | CCSGG | 1 cut(s) | 428 |
| BsaBI | GATNNNNATC | 4 cut(s) | 48, 54, 270, 404 |
| BsaHI | GRCGYC | 1 cut(s) | 743 |
| BsaJI | CCNNGG | 5 cut(s) | 169, 280, 690, 702, 726 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 577, 733, 1000 |
| Bse1I | ACTGG | 1 cut(s) | 1023 |
| Bse8I | GATNNNNATC | 4 cut(s) | 48, 54, 270, 404 |
| BseBI | CCWGG | 1 cut(s) | 728 |
| BseDI | CCNNGG | 5 cut(s) | 169, 280, 690, 702, 726 |
| BseGI | GGATG | 2 cut(s) | 393, 526 |
| BseJI | GATNNNNATC | 4 cut(s) | 48, 54, 270, 404 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 577, 733, 1000 |
| BseMII | CTCAG | 2 cut(s) | 37, 357 |
| BseNI | ACTGG | 1 cut(s) | 1023 |
| BseXI | GCAGC | 7 cut(s) | 445, 510, 710, 719, 722, 900, 973 |
| BsgI | GTGCAG | 1 cut(s) | 462 |
| Bsh1236I | CGCG | 1 cut(s) | 704 |
| BshFI | GGCC | 2 cut(s) | 689, 1004 |
| BshNI | GGYRCC | 2 cut(s) | 742, 810 |
| BsiHKAI | GWGCWC | 1 cut(s) | 24 |
| BsiHKCI | CYCGRG | 1 cut(s) | 840 |
| BsiSI | CCGG | 1 cut(s) | 428 |
| BslFI | GGGAC | 1 cut(s) | 126 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 577, 733, 1000 |
| BsmFI | GGGAC | 1 cut(s) | 126 |
| BsnI | GGCC | 2 cut(s) | 689, 1004 |
| BsoBI | CYCGRG | 1 cut(s) | 840 |
| Bsp119I | TTCGAA | 1 cut(s) | 395 |
| Bsp1286I | GDGCHC | 1 cut(s) | 24 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 23 |
| Bsp19I | CCATGG | 1 cut(s) | 690 |
| BspACI | CCGC | 8 cut(s) | 255, 660, 685, 695, 702, 704, 731, 740 |
| BspANI | GGCC | 2 cut(s) | 689, 1004 |
| BspCNI | CTCAG | 2 cut(s) | 36, 358 |
| BspFNI | CGCG | 1 cut(s) | 704 |
| BspHI | TCATGA | 3 cut(s) | 46, 343, 408 |
| BspLI | GGNNCC | 4 cut(s) | 6, 547, 744, 812 |
| BspPI | GGATC | 4 cut(s) | 265, 413, 438, 985 |
| BspQI | GCTCTTC | 1 cut(s) | 507 |
| BspT104I | TTCGAA | 1 cut(s) | 395 |
| BspT107I | GGYRCC | 2 cut(s) | 742, 810 |
| BspTI | CTTAAG | 1 cut(s) | 151 |
| BsrI | ACTGG | 1 cut(s) | 1023 |
| BssECI | CCNNGG | 5 cut(s) | 169, 280, 690, 702, 726 |
| BssNI | GRCGYC | 1 cut(s) | 743 |
| BssSI | CACGAG | 2 cut(s) | 360, 480 |
| BssT1I | CCWWGG | 3 cut(s) | 169, 280, 690 |
| Bst2BI | CACGAG | 2 cut(s) | 360, 480 |
| Bst2UI | CCWGG | 1 cut(s) | 728 |
| Bst6I | CTCTTC | 2 cut(s) | 89, 507 |
| BstACI | GRCGYC | 1 cut(s) | 743 |
| BstAFI | CTTAAG | 1 cut(s) | 151 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 523 |
| BstBI | TTCGAA | 1 cut(s) | 395 |
| BstC8I | GCNNGC | 2 cut(s) | 658, 687 |
| BstDEI | CTNAG | 3 cut(s) | 23, 366, 639 |
| BstDSI | CCRYGG | 2 cut(s) | 690, 702 |
| BstF5I | GGATG | 2 cut(s) | 393, 526 |
| BstFNI | CGCG | 1 cut(s) | 704 |
| BstH2I | RGCGCY | 2 cut(s) | 746, 912 |
| BstHHI | GCGC | 2 cut(s) | 745, 911 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 523, 591, 686, 695, 701, 704, 707, 710, 737 |
| BstNI | CCWGG | 1 cut(s) | 728 |
| BstSCI | CCNGG | 2 cut(s) | 426, 726 |
| BstSFI | CTRYAG | 1 cut(s) | 193 |
| BstUI | CGCG | 1 cut(s) | 704 |
| BstV1I | GCAGC | 7 cut(s) | 445, 510, 710, 719, 722, 900, 973 |
| BstV2I | GAAGAC | 2 cut(s) | 384, 860 |
| BsuRI | GGCC | 2 cut(s) | 689, 1004 |
| BtgI | CCRYGG | 2 cut(s) | 690, 702 |
| BtsCI | GGATG | 2 cut(s) | 393, 526 |
| Cac8I | GCNNGC | 2 cut(s) | 658, 687 |
| CaiI | CAGNNNCTG | 2 cut(s) | 523, 911 |
| CciI | TCATGA | 3 cut(s) | 46, 343, 408 |
| CfoI | GCGC | 2 cut(s) | 745, 911 |
| Cfr13I | GGNCC | 5 cut(s) | 173, 626, 635, 687, 1003 |
| Cfr42I | CCGCGG | 1 cut(s) | 705 |
| Csp6I | GTAC | 3 cut(s) | 303, 357, 474 |
| CviAII | CATG | 9 cut(s) | 41, 47, 77, 261, 320, 344, 409, 691, 892 |
| CviQI | GTAC | 3 cut(s) | 303, 357, 474 |
| DdeI | CTNAG | 3 cut(s) | 23, 366, 639 |
| DinI | GGCGCC | 1 cut(s) | 744 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 633 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 633 |
| Eam1104I | CTCTTC | 2 cut(s) | 89, 507 |
| EarI | CTCTTC | 2 cut(s) | 89, 507 |
| EciI | GGCGGA | 1 cut(s) | 270 |
| Ecl136II | GAGCTC | 1 cut(s) | 22 |
| Eco130I | CCWWGG | 3 cut(s) | 169, 280, 690 |
| Eco24I | GRGCYC | 1 cut(s) | 24 |
| Eco47I | GGWCC | 3 cut(s) | 173, 626, 635 |
| Eco53kI | GAGCTC | 1 cut(s) | 22 |
| Eco88I | CYCGRG | 1 cut(s) | 840 |
| EcoICRI | GAGCTC | 1 cut(s) | 22 |
| EcoO109I | RGGNCCY | 1 cut(s) | 635 |
| EcoRI | GAATTC | 2 cut(s) | 663, 901 |
| EcoRII | CCWGG | 1 cut(s) | 726 |
| EcoT14I | CCWWGG | 3 cut(s) | 169, 280, 690 |
| EcoT38I | GRGCYC | 1 cut(s) | 24 |
| EgeI | GGCGCC | 1 cut(s) | 744 |
| EheI | GGCGCC | 1 cut(s) | 744 |
| ErhI | CCWWGG | 3 cut(s) | 169, 280, 690 |
| FaeI | CATG | 9 cut(s) | 44, 50, 80, 264, 323, 347, 412, 694, 895 |
| FaqI | GGGAC | 1 cut(s) | 126 |
| FatI | CATG | 9 cut(s) | 40, 46, 76, 260, 319, 343, 408, 690, 891 |
| FauI | CCCGC | 1 cut(s) | 678 |
| FbaI | TGATCA | 8 cut(s) | 43, 49, 64, 184, 235, 265, 331, 753 |
| FokI | GGATG | 2 cut(s) | 400, 513 |
| FriOI | GRGCYC | 1 cut(s) | 24 |
| FspBI | CTAG | 4 cut(s) | 95, 138, 227, 630 |
| GlaI | GCGC | 2 cut(s) | 744, 910 |
| HaeII | RGCGCY | 2 cut(s) | 746, 912 |
| HaeIII | GGCC | 2 cut(s) | 689, 1004 |
| HapII | CCGG | 1 cut(s) | 428 |
| HhaI | GCGC | 2 cut(s) | 745, 911 |
| Hin1I | GRCGYC | 1 cut(s) | 743 |
| Hin1II | CATG | 9 cut(s) | 44, 50, 80, 264, 323, 347, 412, 694, 895 |
| Hin6I | GCGC | 2 cut(s) | 743, 909 |
| HinP1I | GCGC | 2 cut(s) | 743, 909 |
| HincII | GTYRAC | 1 cut(s) | 487 |
| HindII | GTYRAC | 1 cut(s) | 487 |
| HindIII | AAGCTT | 1 cut(s) | 860 |
| HinfI | GANTC | 1 cut(s) | 895 |
| HpaI | GTTAAC | 1 cut(s) | 487 |
| HpaII | CCGG | 1 cut(s) | 428 |
| HphI | GGTGA | 5 cut(s) | 62, 305, 528, 781, 828 |
| Hpy166II | GTNNAC | 3 cut(s) | 487, 626, 1016 |
| Hpy188I | TCNGA | 5 cut(s) | 184, 276, 309, 589, 900 |
| Hpy8I | GTNNAC | 3 cut(s) | 487, 626, 1016 |
| HpyAV | CCTTC | 3 cut(s) | 284, 843, 973 |
| HpyCH4V | TGCA | 3 cut(s) | 479, 526, 594 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 523, 591, 686, 695, 701, 704, 707, 710, 737 |
| HpyF3I | CTNAG | 3 cut(s) | 23, 366, 639 |
| Hsp92I | GRCGYC | 1 cut(s) | 743 |
| Hsp92II | CATG | 9 cut(s) | 44, 50, 80, 264, 323, 347, 412, 694, 895 |
| HspAI | GCGC | 2 cut(s) | 743, 909 |
| KasI | GGCGCC | 1 cut(s) | 742 |
| Ksp22I | TGATCA | 8 cut(s) | 43, 49, 64, 184, 235, 265, 331, 753 |
| KspAI | GTTAAC | 1 cut(s) | 487 |
| KspI | CCGCGG | 1 cut(s) | 705 |
| LguI | GCTCTTC | 1 cut(s) | 507 |
| LmnI | GCTCC | 3 cut(s) | 10, 323, 590 |
| LpnPI | CCDG | 9 cut(s) | 171, 233, 441, 670, 713, 740, 891, 1004, 1007 |
| Lsp1109I | GCAGC | 7 cut(s) | 445, 510, 710, 719, 722, 900, 973 |
| LweI | GCATC | 1 cut(s) | 535 |
| MaeI | CTAG | 4 cut(s) | 95, 138, 227, 630 |
| MaeIII | GTNAC | 3 cut(s) | 642, 650, 866 |
| MboII | GAAGA | 7 cut(s) | 76, 99, 384, 409, 427, 524, 865 |
| MhlI | GDGCHC | 1 cut(s) | 24 |
| MluCI | AATT | 6 cut(s) | 88, 215, 438, 663, 882, 901 |
| Mly113I | GGCGCC | 1 cut(s) | 743 |
| MseI | TTAA | 4 cut(s) | 152, 381, 486, 777 |
| MslI | CAYNNNNRTG | 3 cut(s) | 45, 75, 613 |
| MspA1I | CMGCKG | 1 cut(s) | 704 |
| MspCI | CTTAAG | 1 cut(s) | 151 |
| MspI | CCGG | 1 cut(s) | 428 |
| MspR9I | CCNGG | 2 cut(s) | 428, 728 |
| MvaI | CCWGG | 1 cut(s) | 728 |
| MvnI | CGCG | 1 cut(s) | 704 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 523, 591, 686, 695, 701, 704, 707, 710, 737 |
| NarI | GGCGCC | 1 cut(s) | 743 |
| NciI | CCSGG | 1 cut(s) | 428 |
| NcoI | CCATGG | 1 cut(s) | 690 |
| NlaIII | CATG | 9 cut(s) | 44, 50, 80, 264, 323, 347, 412, 694, 895 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 547, 744, 812 |
| NmuCI | GTSAC | 1 cut(s) | 642 |
| NspV | TTCGAA | 1 cut(s) | 395 |
| OliI | CACNNNNGTG | 1 cut(s) | 613 |
| PaeR7I | CTCGAG | 1 cut(s) | 840 |
| PagI | TCATGA | 3 cut(s) | 46, 343, 408 |
| PciSI | GCTCTTC | 1 cut(s) | 507 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 358 |
| PfeI | GAWTC | 1 cut(s) | 895 |
| PluTI | GGCGCC | 1 cut(s) | 746 |
| PpuMI | RGGWCCY | 1 cut(s) | 635 |
| Psp124BI | GAGCTC | 1 cut(s) | 24 |
| Psp5II | RGGWCCY | 1 cut(s) | 635 |
| Psp6I | CCWGG | 1 cut(s) | 726 |
| PspGI | CCWGG | 1 cut(s) | 726 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 547, 744, 812 |
| PspPI | GGNCC | 5 cut(s) | 173, 626, 635, 687, 1003 |
| PspPPI | RGGWCCY | 1 cut(s) | 635 |
| PspXI | VCTCGAGB | 1 cut(s) | 840 |
| PstNI | CAGNNNCTG | 2 cut(s) | 523, 911 |
| RsaI | GTAC | 3 cut(s) | 304, 358, 475 |
| RsaNI | GTAC | 3 cut(s) | 303, 357, 474 |
| RseI | CAYNNNNRTG | 3 cut(s) | 45, 75, 613 |
| SacI | GAGCTC | 1 cut(s) | 24 |
| SacII | CCGCGG | 1 cut(s) | 705 |
| SapI | GCTCTTC | 1 cut(s) | 507 |
| SaqAI | TTAA | 4 cut(s) | 152, 381, 486, 777 |
| Sau96I | GGNCC | 5 cut(s) | 173, 626, 635, 687, 1003 |
| ScaI | AGTACT | 2 cut(s) | 358, 475 |
| ScrFI | CCNGG | 2 cut(s) | 428, 728 |
| SduI | GDGCHC | 1 cut(s) | 24 |
| SfaNI | GCATC | 1 cut(s) | 535 |
| SfcI | CTRYAG | 1 cut(s) | 193 |
| SfoI | GGCGCC | 1 cut(s) | 744 |
| Sfr274I | CTCGAG | 1 cut(s) | 840 |
| Sfr303I | CCGCGG | 1 cut(s) | 705 |
| SfuI | TTCGAA | 1 cut(s) | 395 |
| SgrBI | CCGCGG | 1 cut(s) | 705 |
| SinI | GGWCC | 3 cut(s) | 173, 626, 635 |
| SlaI | CTCGAG | 1 cut(s) | 840 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 45, 75, 613 |
| SmlI | CTYRAG | 5 cut(s) | 17, 151, 162, 840, 969 |
| SmoI | CTYRAG | 5 cut(s) | 17, 151, 162, 840, 969 |
| Sse9I | AATT | 6 cut(s) | 88, 215, 438, 663, 882, 901 |
| SsiI | CCGC | 8 cut(s) | 255, 660, 685, 695, 702, 704, 731, 740 |
| SspDI | GGCGCC | 1 cut(s) | 742 |
| SspI | AATATT | 1 cut(s) | 373 |
| SspMI | CTAG | 4 cut(s) | 95, 138, 227, 630 |
| SstI | GAGCTC | 1 cut(s) | 24 |
| StyD4I | CCNGG | 2 cut(s) | 426, 726 |
| StyI | CCWWGG | 3 cut(s) | 169, 280, 690 |
| TaqI | TCGA | 4 cut(s) | 352, 395, 841, 851 |
| TasI | AATT | 6 cut(s) | 88, 215, 438, 663, 882, 901 |
| TatI | WGTACW | 2 cut(s) | 356, 473 |
| TauI | GCSGC | 4 cut(s) | 698, 704, 707, 743 |
| TfiI | GAWTC | 1 cut(s) | 895 |
| Tru1I | TTAA | 4 cut(s) | 152, 381, 486, 777 |
| Tru9I | TTAA | 4 cut(s) | 152, 381, 486, 777 |
| TseFI | GTSAC | 1 cut(s) | 642 |
| TseI | GCWGC | 7 cut(s) | 458, 523, 698, 707, 710, 888, 986 |
| Tsp45I | GTSAC | 1 cut(s) | 642 |
| TspDTI | ATGAA | 3 cut(s) | 303, 360, 908 |
| Vha464I | CTTAAG | 1 cut(s) | 151 |
| VpaK11BI | GGWCC | 3 cut(s) | 173, 626, 635 |
| XapI | RAATTY | 2 cut(s) | 663, 901 |
| XbaI | TCTAGA | 1 cut(s) | 94 |
| XhoI | CTCGAG | 1 cut(s) | 840 |
| XspI | CTAG | 4 cut(s) | 95, 138, 227, 630 |
| ZrmI | AGTACT | 2 cut(s) | 358, 475 |