Rorug02G0034100

GATA transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0013070
Physical Location & Seq
Forward (+)
2696907 .. 2698559
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0034100.1

Sequence Viewer

Length: 1032 bp
ATGGCGCTTTCCGACGGTGTGGTGAAGAAGGTCCTCCTCTCCTACGCCTACGTCGGCATATGGATCTTCCTCAGCTTCACCGTCATCGTCTACAACAAGTACATCCTCGACCGCAAGCTCTACAATTGGCCCTTCCCAATTTCCCTCACCATGATCCACATGGCCTTCTGCTCCTCCCTCGCCTACCTCCTCGTCAAGGTCTTCAAGCTCGTCGAGCCAGTCTCCATGTCAAGGGACCTCTACCTCAAGTCCGTCGTCCCCATCGGAGCTCTGTACGCCCTGTCCCTCTGGTTCTCCAACTCCGCTTACATCTTTCTGTCGGTGTCTTTCATTCAGATGCTCAAGGCTCTAATGCCGGTGGCCGTCTACTCGATCGGGATTCTCATCAAGAAGGACCCTTTCAAATCGGACACCATGGTCAACATGCTCTCGATCTCGTTCGGCGTGGCGGTTGCCGCTTACGGCGAGGCGAAATTCAACTCGTGGGGAGTGAGCCTGCAGCTAATGGCCGTGGGTTTCGAGGCCACGAGGTTGGTTCTGATTCAGATCTTGCTTAATGCTAAGGGTATCAGCTTGAATCCGATTACTTCTCTTTATTATGTTGCCCCCTGCTGCTTTGCGTTTCTGTGCATTCCTTGGATCGTTGTGGAGTTCCCCGTGTTGAAGGAGACCTCGAGTTTCCACTTTGATTTCGTCATTTTCGGGACCAATTCGCTCTGTGCGTTTGCGTTGAACCTGGCTGTGTTTCTGCTGGTGGGGAAGACTTCGGCTTTGACCATGAATGTTGCCGGGGTTGTGAAAGATTGGCTCTTGATTGCCTTTTCGTGGTCCGTGATCAAGGACACCGTGACGCCAATCAACCTGATTGGGTATCTGATTGCGTTTATCGGTGTGGCCTATTACAATCATGCGAAACTGCAGGCGCTTAAGGCCGCCGAGGCGCAGAAGAAGGCTCAGCAGGACAATGTGGAGGCCGGCAAGCTGTTGGAGGACAGAGATGAGGATGGAAAGAAGAACGAAACTCAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001101 GO:0001228 GO:0001678 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009739 GO:0009740 GO:0009743 GO:0009746 GO:0009749 GO:0009755 GO:0009756 GO:0009757 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009910 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010035 GO:0010114 GO:0010151 GO:0010167 GO:0010182 GO:0010187 GO:0010255 GO:0010380 GO:0010467 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010648 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032774 GO:0032870 GO:0032991 GO:0033500 GO:0033993 GO:0034284 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042592 GO:0042593 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043610 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051173 GO:0051193 GO:0051194 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051716 GO:0055082 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071368 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0080050 GO:0080090 GO:0090056 GO:0090304 GO:0090693 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1900140 GO:1901360 GO:1901362 GO:1901363 GO:1901401 GO:1901403 GO:1901463 GO:1901465 GO:1901576 GO:1901698 GO:1901700 GO:1901701 GO:1902326 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GATA

Protein Analysis

343

Amino Acids

38.15

Weight (kDa)

8.76

Isoelectric Point (pI)

19.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 16 - 302 2.7e-22 Triose-phosphate Transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013070)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G26150 AT5G56860
fragaria_vesca FvH4_1g07390
malus_domestica MD02G1078700.v1.1 MD15G1206700.v1.1
prunus_persica Prupe.7G210100_v2.0.a1
pyrus_communis pycom02g06290 pycom15g18310
rosa_chinensis RchiOBHm_Chr2g0093271
rosa_laevigata RLG00000016385
rosa_multiflora Rmu_sc0003724.1_g000022
rosa_roxburghii Rroxscaffold_2G00148320
rosa_rugosa Rorug02G0034100
rosa_samantha Rh2AG080400 Rh2BG081400 Rh2CG083800 Rh2DG079300
rosa_wichuraiana Rw2G006660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 416
AccI GTMKAC 2 cut(s) 90, 366
AciI CCGC 5 cut(s) 112, 303, 449, 456, 933
AclWI GGATC 3 cut(s) 71, 148, 647
AcoI YGGCCR 2 cut(s) 360, 507
AcsI RAATTY 1 cut(s) 473
AcyI GRCGYC 1 cut(s) 851
AfaI GTAC 2 cut(s) 101, 275
AfiI CCNNNNNNNGG 3 cut(s) 196, 231, 825
AflII CTTAAG 1 cut(s) 926
AgsI TTSAA 6 cut(s) 205, 403, 478, 577, 664, 733
AjnI CCWGG 1 cut(s) 735
AluBI AGCT 7 cut(s) 75, 118, 208, 269, 502, 573, 982
AluI AGCT 7 cut(s) 75, 118, 208, 269, 502, 573, 982
Alw21I GWGCWC 1 cut(s) 271
Alw26I GTCTC 2 cut(s) 226, 662
AlwI GGATC 3 cut(s) 71, 148, 647
Ama87I CYCGRG 1 cut(s) 673
AoxI GGCC 8 cut(s) 128, 162, 360, 507, 522, 894, 930, 972
ApeKI GCWGC 2 cut(s) 499, 612
ApoI RAATTY 1 cut(s) 473
ArsI GACNNNNNNTTYG 2 cut(s) 754, 786
AspLEI GCGC 3 cut(s) 7, 925, 943
AspS9I GGNCC 6 cut(s) 31, 129, 235, 394, 705, 828
AsuC2I CCSGG 1 cut(s) 790
AsuHPI GGTGA 3 cut(s) 34, 70, 139
AvaI CYCGRG 1 cut(s) 673
AvaII GGWCC 5 cut(s) 31, 235, 394, 705, 828
BanII GRGCYC 1 cut(s) 271
BauI CACGAG 2 cut(s) 481, 526
BbsI GAAGAC 2 cut(s) 193, 767
Bbv12I GWGCWC 1 cut(s) 271
BbvCI CCTCAGC 1 cut(s) 71
BbvI GCAGC 2 cut(s) 511, 599
BccI CCATC 2 cut(s) 269, 998
BceAI ACGGC 3 cut(s) 347, 478, 494
BciT130I CCWGG 1 cut(s) 737
BclI TGATCA 1 cut(s) 834
BcnI CCSGG 1 cut(s) 790
BcoDI GTCTC 2 cut(s) 226, 662
BfmI CTRYAG 2 cut(s) 497, 917
BfoI RGCGCY 2 cut(s) 8, 926
BfrI CTTAAG 1 cut(s) 926
BglI GCCNNNNNGGC 1 cut(s) 938
BglII AGATCT 1 cut(s) 546
BisI GCNGC 4 cut(s) 456, 500, 613, 933
BlpI GCTNAGC 1 cut(s) 954
BlsI GCNGC 4 cut(s) 457, 501, 614, 934
Bme1390I CCNGG 2 cut(s) 737, 790
Bme18I GGWCC 5 cut(s) 31, 235, 394, 705, 828
BmeT110I CYCGRG 1 cut(s) 673
BmgT120I GGNCC 6 cut(s) 31, 129, 235, 394, 705, 828
BmiI GGNNCC 3 cut(s) 236, 396, 706
BmrFI CCNGG 2 cut(s) 737, 790
BmsI GCATC 1 cut(s) 327
BpiI GAAGAC 2 cut(s) 193, 767
BplI GAGNNNNNCTC 2 cut(s) 206, 238
Bpu10I CCTNAGC 2 cut(s) 71, 561
Bpu1102I GCTNAGC 1 cut(s) 954
BpuEI CTTGAG 2 cut(s) 230, 326
BpuMI CCSGG 1 cut(s) 790
BsaBI GATNNNNATC 2 cut(s) 383, 545
BsaHI GRCGYC 1 cut(s) 851
BsaI GGTCTC 1 cut(s) 662
BsaJI CCNNGG 5 cut(s) 414, 510, 635, 789, 936
Bsc4I CCNNNNNNNGG 3 cut(s) 196, 231, 825
Bse118I RCCGGY 2 cut(s) 355, 974
Bse1I ACTGG 1 cut(s) 218
Bse8I GATNNNNATC 2 cut(s) 383, 545
BseBI CCWGG 1 cut(s) 737
BseDI CCNNGG 5 cut(s) 414, 510, 635, 789, 936
BseGI GGATG 2 cut(s) 102, 1009
BseJI GATNNNNATC 2 cut(s) 383, 545
BseLI CCNNNNNNNGG 3 cut(s) 196, 231, 825
BseMII CTCAG 2 cut(s) 85, 968
BseNI ACTGG 1 cut(s) 218
BseRI GAGGAG 3 cut(s) 26, 163, 179
BseXI GCAGC 2 cut(s) 511, 599
Bsh1285I CGRYCG 2 cut(s) 112, 375
BshFI GGCC 8 cut(s) 130, 164, 362, 509, 524, 896, 932, 974
BsiEI CGRYCG 2 cut(s) 112, 375
BsiHKAI GWGCWC 1 cut(s) 271
BsiHKCI CYCGRG 1 cut(s) 673
BsiSI CCGG 3 cut(s) 356, 789, 975
BslFI GGGAC 4 cut(s) 242, 248, 268, 718
BslI CCNNNNNNNGG 3 cut(s) 196, 231, 825
BsmAI GTCTC 2 cut(s) 226, 662
BsmFI GGGAC 4 cut(s) 242, 248, 268, 718
BsmI GAATGC 1 cut(s) 630
BsnI GGCC 8 cut(s) 130, 164, 362, 509, 524, 896, 932, 974
Bso31I GGTCTC 1 cut(s) 662
BsoBI CYCGRG 1 cut(s) 673
Bsp1286I GDGCHC 1 cut(s) 271
Bsp143I GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
Bsp1720I GCTNAGC 1 cut(s) 954
Bsp19I CCATGG 1 cut(s) 414
BspACI CCGC 5 cut(s) 112, 303, 449, 456, 933
BspANI GGCC 8 cut(s) 130, 164, 362, 509, 524, 896, 932, 974
BspCNI CTCAG 2 cut(s) 84, 967
BspLI GGNNCC 3 cut(s) 236, 396, 706
BspMAI CTGCAG 2 cut(s) 501, 921
BspPI GGATC 3 cut(s) 71, 148, 647
BspTI CTTAAG 1 cut(s) 926
BspTNI GGTCTC 1 cut(s) 662
BsrFI RCCGGY 2 cut(s) 355, 974
BsrI ACTGG 1 cut(s) 218
BssAI RCCGGY 2 cut(s) 355, 974
BssECI CCNNGG 5 cut(s) 414, 510, 635, 789, 936
BssMI GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
BssNI GRCGYC 1 cut(s) 851
BssSI CACGAG 2 cut(s) 481, 526
BssT1I CCWWGG 2 cut(s) 414, 635
Bst2BI CACGAG 2 cut(s) 481, 526
Bst2UI CCWGG 1 cut(s) 737
Bst4CI ACNGT 3 cut(s) 17, 82, 847
BstACI GRCGYC 1 cut(s) 851
BstAFI CTTAAG 1 cut(s) 926
BstC8I GCNNGC 5 cut(s) 116, 497, 921, 976, 980
BstDEI CTNAG 4 cut(s) 71, 561, 954, 1023
BstDSI CCRYGG 2 cut(s) 414, 510
BstENI CCTNNNNNAGG 1 cut(s) 194
BstF5I GGATG 2 cut(s) 102, 1009
BstH2I RGCGCY 2 cut(s) 8, 926
BstHHI GCGC 3 cut(s) 7, 925, 943
BstKTI GATC 7 cut(s) 66, 156, 375, 435, 549, 642, 837
BstMAI GTCTC 2 cut(s) 226, 662
BstMBI GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
BstMCI CGRYCG 2 cut(s) 112, 375
BstMWI GCNNNNNNNGC 5 cut(s) 214, 275, 455, 929, 938
BstNI CCWGG 1 cut(s) 737
BstNSI RCATGY 1 cut(s) 427
BstSCI CCNGG 2 cut(s) 735, 788
BstSFI CTRYAG 2 cut(s) 497, 917
BstV1I GCAGC 2 cut(s) 511, 599
BstV2I GAAGAC 2 cut(s) 193, 767
BstX2I RGATCY 2 cut(s) 63, 546
BstXI CCANNNNNNTGG 1 cut(s) 532
BstYI RGATCY 2 cut(s) 63, 546
BsuRI GGCC 8 cut(s) 130, 164, 362, 509, 524, 896, 932, 974
BtgI CCRYGG 2 cut(s) 414, 510
BtsCI GGATG 2 cut(s) 102, 1009
Cac8I GCNNGC 5 cut(s) 116, 497, 921, 976, 980
CfoI GCGC 3 cut(s) 7, 925, 943
Cfr10I RCCGGY 2 cut(s) 355, 974
Cfr13I GGNCC 6 cut(s) 31, 129, 235, 394, 705, 828
CseI GACGC 1 cut(s) 859
Csp6I GTAC 2 cut(s) 100, 274
CviAII CATG 7 cut(s) 151, 160, 226, 415, 424, 778, 908
CviQI GTAC 2 cut(s) 100, 274
DdeI CTNAG 4 cut(s) 71, 561, 954, 1023
DpnI GATC 7 cut(s) 65, 155, 374, 434, 548, 641, 836
DpnII GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
DrdI GACNNNNNNGTC 1 cut(s) 416
DseDI GACNNNNNNGTC 1 cut(s) 416
EaeI YGGCCR 2 cut(s) 360, 507
Ecl136II GAGCTC 1 cut(s) 269
Eco130I CCWWGG 2 cut(s) 414, 635
Eco24I GRGCYC 1 cut(s) 271
Eco31I GGTCTC 1 cut(s) 662
Eco47I GGWCC 5 cut(s) 31, 235, 394, 705, 828
Eco53kI GAGCTC 1 cut(s) 269
Eco88I CYCGRG 1 cut(s) 673
EcoICRI GAGCTC 1 cut(s) 269
EcoNI CCTNNNNNAGG 1 cut(s) 194
EcoO109I RGGNCCY 3 cut(s) 31, 235, 394
EcoRII CCWGG 1 cut(s) 735
EcoT14I CCWWGG 2 cut(s) 414, 635
EcoT38I GRGCYC 1 cut(s) 271
ErhI CCWWGG 2 cut(s) 414, 635
FaeI CATG 7 cut(s) 154, 163, 229, 418, 427, 781, 911
FaqI GGGAC 4 cut(s) 242, 248, 268, 718
FatI CATG 7 cut(s) 150, 159, 225, 414, 423, 777, 907
FauNDI CATATG 1 cut(s) 59
FbaI TGATCA 1 cut(s) 834
FblI GTMKAC 2 cut(s) 90, 366
Fnu4HI GCNGC 4 cut(s) 456, 500, 613, 933
FokI GGATG 2 cut(s) 89, 1016
FriOI GRGCYC 1 cut(s) 271
Fsp4HI GCNGC 4 cut(s) 456, 500, 613, 933
GlaI GCGC 3 cut(s) 6, 924, 942
GluI GCNGC 4 cut(s) 456, 500, 613, 933
HaeII RGCGCY 2 cut(s) 8, 926
HaeIII GGCC 8 cut(s) 130, 164, 362, 509, 524, 896, 932, 974
HapII CCGG 3 cut(s) 356, 789, 975
HgaI GACGC 1 cut(s) 859
HhaI GCGC 3 cut(s) 7, 925, 943
Hin1I GRCGYC 1 cut(s) 851
Hin1II CATG 7 cut(s) 154, 163, 229, 418, 427, 781, 911
Hin6I GCGC 3 cut(s) 5, 923, 941
HinP1I GCGC 3 cut(s) 5, 923, 941
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HinfI GANTC 3 cut(s) 379, 541, 577
HpaII CCGG 3 cut(s) 356, 789, 975
HphI GGTGA 3 cut(s) 34, 70, 139
Hpy166II GTNNAC 3 cut(s) 91, 367, 421
Hpy188I TCNGA 8 cut(s) 13, 266, 336, 409, 540, 546, 582, 876
Hpy188III TCNNGA 6 cut(s) 376, 388, 430, 703, 811, 1025
Hpy8I GTNNAC 3 cut(s) 91, 367, 421
Hpy99I CGWCG 4 cut(s) 17, 56, 215, 257
HpyAV CCTTC 6 cut(s) 22, 142, 175, 385, 658, 943
HpyCH4III ACNGT 3 cut(s) 17, 82, 847
HpyCH4IV ACGT 1 cut(s) 51
HpyCH4V TGCA 3 cut(s) 499, 630, 919
HpyF10VI GCNNNNNNNGC 5 cut(s) 214, 275, 455, 929, 938
HpyF3I CTNAG 4 cut(s) 71, 561, 954, 1023
HpySE526I ACGT 1 cut(s) 51
Hsp92I GRCGYC 1 cut(s) 851
Hsp92II CATG 7 cut(s) 154, 163, 229, 418, 427, 781, 911
HspAI GCGC 3 cut(s) 5, 923, 941
KroI GCCGGC 1 cut(s) 974
KroNI GCCGGC 1 cut(s) 976
Ksp22I TGATCA 1 cut(s) 834
Kzo9I GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
LmnI GCTCC 2 cut(s) 176, 266
Lsp1109I GCAGC 2 cut(s) 511, 599
LweI GCATC 1 cut(s) 327
MaeII ACGT 1 cut(s) 51
MaeIII GTNAC 1 cut(s) 847
MalI GATC 7 cut(s) 65, 155, 374, 434, 548, 641, 836
MboI GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
MboII GAAGA 6 cut(s) 37, 58, 193, 772, 958, 1024
MfeI CAATTG 1 cut(s) 124
MflI RGATCY 2 cut(s) 63, 546
MhlI GDGCHC 1 cut(s) 271
MluCI AATT 4 cut(s) 124, 138, 473, 709
MmeI TCCRAC 3 cut(s) 36, 321, 966
MroNI GCCGGC 1 cut(s) 974
MseI TTAA 2 cut(s) 555, 927
MslI CAYNNNNRTG 1 cut(s) 335
MspCI CTTAAG 1 cut(s) 926
MspI CCGG 3 cut(s) 356, 789, 975
MspR9I CCNGG 2 cut(s) 737, 790
MunI CAATTG 1 cut(s) 124
Mva1269I GAATGC 1 cut(s) 630
MvaI CCWGG 1 cut(s) 737
MwoI GCNNNNNNNGC 5 cut(s) 214, 275, 455, 929, 938
NaeI GCCGGC 1 cut(s) 976
NciI CCSGG 1 cut(s) 790
NcoI CCATGG 1 cut(s) 414
NdeI CATATG 1 cut(s) 59
NdeII GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
NgoMIV GCCGGC 1 cut(s) 974
NlaIII CATG 7 cut(s) 154, 163, 229, 418, 427, 781, 911
NlaIV GGNNCC 3 cut(s) 236, 396, 706
NmeAIII GCCGAG 1 cut(s) 961
NmuCI GTSAC 1 cut(s) 847
NspI RCATGY 1 cut(s) 427
PaeR7I CTCGAG 1 cut(s) 673
PcsI WCGNNNNNNNCGW 1 cut(s) 719
PctI GAATGC 1 cut(s) 630
PdiI GCCGGC 1 cut(s) 976
PfeI GAWTC 3 cut(s) 379, 541, 577
PkrI GCNGC 4 cut(s) 457, 501, 614, 934
Ple19I CGATCG 1 cut(s) 375
PpuMI RGGWCCY 3 cut(s) 31, 235, 394
Psp124BI GAGCTC 1 cut(s) 271
Psp5II RGGWCCY 3 cut(s) 31, 235, 394
Psp6I CCWGG 1 cut(s) 735
PspGI CCWGG 1 cut(s) 735
PspN4I GGNNCC 3 cut(s) 236, 396, 706
PspPI GGNCC 6 cut(s) 31, 129, 235, 394, 705, 828
PspPPI RGGWCCY 3 cut(s) 31, 235, 394
PspXI VCTCGAGB 1 cut(s) 673
PstI CTGCAG 2 cut(s) 501, 921
PsuI RGATCY 2 cut(s) 63, 546
PvuI CGATCG 1 cut(s) 375
RsaI GTAC 2 cut(s) 101, 275
RsaNI GTAC 2 cut(s) 100, 274
RseI CAYNNNNRTG 1 cut(s) 335
SacI GAGCTC 1 cut(s) 271
SaqAI TTAA 2 cut(s) 555, 927
SatI GCNGC 4 cut(s) 456, 500, 613, 933
Sau3AI GATC 7 cut(s) 63, 153, 372, 432, 546, 639, 834
Sau96I GGNCC 6 cut(s) 31, 129, 235, 394, 705, 828
ScrFI CCNGG 2 cut(s) 737, 790
SduI GDGCHC 1 cut(s) 271
SfaNI GCATC 1 cut(s) 327
SfcI CTRYAG 2 cut(s) 497, 917
Sfr274I CTCGAG 1 cut(s) 673
SinI GGWCC 5 cut(s) 31, 235, 394, 705, 828
SlaI CTCGAG 1 cut(s) 673
SmiMI CAYNNNNRTG 1 cut(s) 335
SmlI CTYRAG 4 cut(s) 245, 341, 673, 926
SmoI CTYRAG 4 cut(s) 245, 341, 673, 926
Sse9I AATT 4 cut(s) 124, 138, 473, 709
SsiI CCGC 5 cut(s) 112, 303, 449, 456, 933
SstI GAGCTC 1 cut(s) 271
StyD4I CCNGG 2 cut(s) 735, 788
StyI CCWWGG 2 cut(s) 414, 635
TaaI ACNGT 3 cut(s) 17, 82, 847
TaiI ACGT 1 cut(s) 54
TaqI TCGA 6 cut(s) 108, 213, 371, 431, 519, 674
TasI AATT 4 cut(s) 124, 138, 473, 709
TatI WGTACW 1 cut(s) 99
TauI GCSGC 2 cut(s) 458, 935
TfiI GAWTC 3 cut(s) 379, 541, 577
Tru1I TTAA 2 cut(s) 555, 927
Tru9I TTAA 2 cut(s) 555, 927
TseFI GTSAC 1 cut(s) 847
TseI GCWGC 2 cut(s) 499, 612
Tsp45I GTSAC 1 cut(s) 847
TspDTI ATGAA 2 cut(s) 319, 794
TspGWI ACGGA 2 cut(s) 241, 820
Vha464I CTTAAG 1 cut(s) 926
VpaK11BI GGWCC 5 cut(s) 31, 235, 394, 705, 828
XagI CCTNNNNNAGG 1 cut(s) 194
XapI RAATTY 1 cut(s) 473
XceI RCATGY 1 cut(s) 427
XcmI CCANNNNNNNNNTGG 1 cut(s) 157
XhoI CTCGAG 1 cut(s) 673
XmiI GTMKAC 2 cut(s) 90, 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.