Auxin-induced protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1058700.v1.1 |
| rosa_chinensis | RchiOBHm_Chr5g0056751 RchiOBHm_Chr6g0269011 |
| rosa_laevigata | RLG00000013889 RLG00000035125 |
| rosa_multiflora | Rmu_sc0001460.1_g000058 Rmu_sc0004350.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00023620 Rroxscaffold_7G00199090 |
| rosa_rugosa | Rorug06G0044600 |
| rosa_wichuraiana | Rw5G034900 Rw6G014180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 54 |
| AccIII | TCCGGA | 1 cut(s) | 48 |
| AciI | CCGC | 3 cut(s) | 137, 172, 273 |
| AcsI | RAATTY | 1 cut(s) | 242 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 262, 263 |
| AgsI | TTSAA | 2 cut(s) | 199, 226 |
| Alw26I | GTCTC | 2 cut(s) | 46, 72 |
| Aor13HI | TCCGGA | 1 cut(s) | 48 |
| ApeKI | GCWGC | 2 cut(s) | 107, 233 |
| ApoI | RAATTY | 1 cut(s) | 242 |
| BbsI | GAAGAC | 1 cut(s) | 162 |
| BbvI | GCAGC | 2 cut(s) | 119, 220 |
| BccI | CCATC | 1 cut(s) | 83 |
| BceAI | ACGGC | 2 cut(s) | 120, 286 |
| BcoDI | GTCTC | 2 cut(s) | 46, 72 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BfmI | CTRYAG | 1 cut(s) | 234 |
| BfuAI | ACCTGC | 1 cut(s) | 54 |
| BisI | GCNGC | 2 cut(s) | 108, 234 |
| BlsI | GCNGC | 2 cut(s) | 109, 235 |
| BpiI | GAAGAC | 1 cut(s) | 162 |
| BsaI | GGTCTC | 1 cut(s) | 72 |
| BsaWI | WCCGGW | 1 cut(s) | 48 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 262, 263 |
| BseAI | TCCGGA | 1 cut(s) | 48 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 262, 263 |
| BseXI | GCAGC | 2 cut(s) | 119, 220 |
| BsiSI | CCGG | 1 cut(s) | 49 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 262, 263 |
| BsmAI | GTCTC | 2 cut(s) | 46, 72 |
| BsmI | GAATGC | 1 cut(s) | 6 |
| Bso31I | GGTCTC | 1 cut(s) | 72 |
| Bsp13I | TCCGGA | 1 cut(s) | 48 |
| Bsp143I | GATC | 1 cut(s) | 310 |
| BspACI | CCGC | 3 cut(s) | 137, 172, 273 |
| BspEI | TCCGGA | 1 cut(s) | 48 |
| BspMAI | CTGCAG | 1 cut(s) | 238 |
| BspMI | ACCTGC | 1 cut(s) | 54 |
| BspTNI | GGTCTC | 1 cut(s) | 72 |
| BssMI | GATC | 1 cut(s) | 310 |
| BstDEI | CTNAG | 1 cut(s) | 278 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstKTI | GATC | 1 cut(s) | 313 |
| BstMAI | GTCTC | 2 cut(s) | 46, 72 |
| BstMBI | GATC | 1 cut(s) | 310 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 297 |
| BstSFI | CTRYAG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 2 cut(s) | 119, 220 |
| BstV2I | GAAGAC | 1 cut(s) | 162 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| BtsI | GCAGTG | 1 cut(s) | 298 |
| BtsIMutI | CAGTG | 1 cut(s) | 298 |
| BveI | ACCTGC | 1 cut(s) | 54 |
| CviAII | CATG | 2 cut(s) | 22, 32 |
| CviJI | RGCY | 3 cut(s) | 129, 233, 300 |
| CviKI_1 | RGCY | 3 cut(s) | 129, 233, 300 |
| DdeI | CTNAG | 1 cut(s) | 278 |
| DpnI | GATC | 1 cut(s) | 312 |
| DpnII | GATC | 1 cut(s) | 310 |
| DraI | TTTAAA | 1 cut(s) | 327 |
| EciI | GGCGGA | 1 cut(s) | 288 |
| Eco31I | GGTCTC | 1 cut(s) | 72 |
| Eco32I | GATATC | 1 cut(s) | 189 |
| EcoRI | GAATTC | 1 cut(s) | 242 |
| EcoRV | GATATC | 1 cut(s) | 189 |
| FaeI | CATG | 2 cut(s) | 25, 35 |
| FaiI | YATR | 4 cut(s) | 23, 33, 57, 144 |
| FatI | CATG | 2 cut(s) | 21, 31 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 234 |
| FokI | GGATG | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 234 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 2 cut(s) | 108, 234 |
| HapII | CCGG | 1 cut(s) | 49 |
| Hin1II | CATG | 2 cut(s) | 25, 35 |
| HinfI | GANTC | 2 cut(s) | 181, 226 |
| HpaII | CCGG | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 4 cut(s) | 91, 123, 149, 186 |
| Hpy188III | TCNNGA | 2 cut(s) | 49, 308 |
| HpyCH4V | TGCA | 2 cut(s) | 236, 291 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 297 |
| HpyF3I | CTNAG | 1 cut(s) | 278 |
| Hsp92II | CATG | 2 cut(s) | 25, 35 |
| Kpn2I | TCCGGA | 1 cut(s) | 48 |
| Kzo9I | GATC | 1 cut(s) | 310 |
| LpnPI | CCDG | 3 cut(s) | 49, 62, 215 |
| Lsp1109I | GCAGC | 2 cut(s) | 119, 220 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeIII | GTNAC | 2 cut(s) | 13, 266 |
| MalI | GATC | 1 cut(s) | 312 |
| MboI | GATC | 1 cut(s) | 310 |
| MboII | GAAGA | 2 cut(s) | 167, 251 |
| MluCI | AATT | 2 cut(s) | 42, 242 |
| MmeI | TCCRAC | 2 cut(s) | 127, 284 |
| MnlI | CCTC | 2 cut(s) | 145, 267 |
| MroI | TCCGGA | 1 cut(s) | 48 |
| MseI | TTAA | 1 cut(s) | 326 |
| MslI | CAYNNNNRTG | 1 cut(s) | 11 |
| MspI | CCGG | 1 cut(s) | 49 |
| Mva1269I | GAATGC | 1 cut(s) | 6 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 297 |
| NdeII | GATC | 1 cut(s) | 310 |
| NlaIII | CATG | 2 cut(s) | 25, 35 |
| NmuCI | GTSAC | 1 cut(s) | 13 |
| PctI | GAATGC | 1 cut(s) | 6 |
| PfeI | GAWTC | 2 cut(s) | 181, 226 |
| PflFI | GACNNNGTC | 1 cut(s) | 23 |
| PkrI | GCNGC | 2 cut(s) | 109, 235 |
| PstI | CTGCAG | 1 cut(s) | 238 |
| PsyI | GACNNNGTC | 1 cut(s) | 23 |
| RseI | CAYNNNNRTG | 1 cut(s) | 11 |
| SaqAI | TTAA | 1 cut(s) | 326 |
| SatI | GCNGC | 2 cut(s) | 108, 234 |
| Sau3AI | GATC | 1 cut(s) | 310 |
| SetI | ASST | 2 cut(s) | 68, 289 |
| SfcI | CTRYAG | 1 cut(s) | 234 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 11 |
| Sse9I | AATT | 2 cut(s) | 42, 242 |
| SsiI | CCGC | 3 cut(s) | 137, 172, 273 |
| SspMI | CTAG | 1 cut(s) | 36 |
| TasI | AATT | 2 cut(s) | 42, 242 |
| TfiI | GAWTC | 2 cut(s) | 181, 226 |
| Tru1I | TTAA | 1 cut(s) | 326 |
| Tru9I | TTAA | 1 cut(s) | 326 |
| TscAI | CASTG | 1 cut(s) | 298 |
| TseFI | GTSAC | 1 cut(s) | 13 |
| TseI | GCWGC | 2 cut(s) | 107, 233 |
| Tsp45I | GTSAC | 1 cut(s) | 13 |
| TspDTI | ATGAA | 1 cut(s) | 20 |
| TspRI | CASTG | 1 cut(s) | 298 |
| Tth111I | GACNNNGTC | 1 cut(s) | 23 |
| XapI | RAATTY | 1 cut(s) | 242 |
| XspI | CTAG | 1 cut(s) | 36 |