Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004501.1

Orthogroup ID

OG0018132

Physical Location & Seq

Genomic Coordinates Forward (+)

12950 .. 24023

Gene Structure 11074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004501.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

atgtcactggtggtgtggttttggtatgctgcagcagcctgcagcatattcatctctgggtttgttgcacaggctcaacccaccacagatacctctgaagtgagagcgctgaatgcaatctttcagaaatggaatattacggccaatacaaagcaatggaacacaactggtgatccatgcagtgaacttgcggtagatgaagatgatgagaccgcttatttccatgacgatgattacaatctcctcgtcaaatgcaactgctcttatgattcaaactcaacttgccacattacccaactgaaagcaatcactttggacattgttgctccaattccagaagagctctatgctttgactttccttcaatatctgaatgtgaaaaaaaattacttgacaggacctatctctgcatcgattggaaatctaaccagcatcaaatacttggacttgggacacaacgacttatcaggggaactaccaaaggaaattgaaaaactcaccaatttgacattcttgggtgttgggacactcaacctttctggttctctgcctcctgagatggggtatttaaaaacattaaaagagatttacattgataattctggacttagcggtgagattccaccaacatttgctaatctaacaaacttggaaatattttgggcaacagatataaacctcactggcaggataccggactttgtaggagattggacaaagcttactaaattgaggtttcagggaaactcttttgaaggttccataccatcttcactgtccaggcgaattactgatttaacgattgccaatgacaactcttctcttggatttatcaacaatatgacgtctctacaagtcttaatgctgaggaataacaatatttctgattcaattccttccaacattggagattaccgaaaattggttcacctggatttgagcttcaacaatttgaatggacaaataccagcctccctatttgatatgaatgagctcgccattctgtttcttggaaacaataagttgaatggtagccttcctgagtctaaaagctcgtctcttctcgttgtggataggcagttggtggaggtcttgacgatagggagggcattcaagaccctggggaccagtggtggagagtattggaagaagattagaggatccaggttgaattgcctccaaaggggcttcccttgccaccgtggtagtccagtttactataacttcatgattaattgcggtggtcctcaggctacgatatccaatggggctgtgtatgagaaggacattgagccccttggtccagctacatattatgtgactgacacaagcagatggggagttagcaatgtcggtcttaaaacacagtttgtagctgcatcatatttgactgggaccaacaatccaaagtatacaatatccacttcatctccaatcggaaatacttcagaccctgtgctatttcagagtgcaaggatctctgcttcatcactcagatactatggcttgggtcttgagaatggaaactataccgtgaagcttgaatttgcagaacaagctatcctagatacccttaaaagaaaaagtcttggaagacgtgtgtttgatatatatatccaggatgttcttgttgttaaagattttgatatacggaaggagacaaataagacatctttgctagctattgaaaaggtatacaaggctcaggtggtttcagagaattaccttgaaatccatttcttctgggctggaaaggggacttgctgtataccagaggagggtacttatggacctcttgtttcagccatcagtgctacacctgaattcaaacctaccgtcagcaacaagctgccaagtagtaagaagaataggactgggcttattgtgggaattgttgttggttgtggagttttaattctggtggtgctgcttttatatattgttcaaggaagaaagaggcacaacactgatgatgactatgatgaagagctgttgggaatagatcttggacctctcactttcagtttttctgaactgaaggcagcaacaaatgactttagtccagataataagcttggagagggaggatttgggcctgtcttcaaaatatgggacaggtgtggggatggggatatggaggagaagggcagcttggtctgggctcacggatgcatatgtgggtatcttgcaccggaatatgctatgcgtggacacttgacagagaaaaccgatgtgtttgcctatggtgttgtcattctagaaattgtcagcggtaggccaaattctgatccaagtttggaaggcgatatggtttatcttcttgaattggcacacaacgctgacactgttgacctcgacaaaaggatcggcggcgcacttcatcgccgatttcagatctttgacaagcgaggcttcaagaatactatgtccttcattttggagcacgaaattgaaattgaaattatgattgagattgggattgggattgggattgggattgagatttggatttggattggatacatctgtgattgttttgcaatccaagtcttcgcgctttctctgttggacttggaggtgttgaagaggccatcaacctcgtggcagaagctgataaggaagcgggtcgatcttctcctagatccaatgctcggcccgcttcttcgaggtgtggacctcgtggtcctcgccgcagctgttggtgttgccaccaattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

905

Amino Acids

100.01

Weight (kDa)

5.24

Isoelectric Point (pI)

32.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018132)

Species	Orthologous Gene IDs
pyrus_communis	pycom03g11110
rosa_chinensis	RchiOBHm_Chr4g0393401
rosa_multiflora	Rmu_sc0004501.1_g000005 Rmu_sc0009248.1_g000015 Rmu_ssc0000054.1_g000002
rosa_roxburghii	Rroxscaffold_3G00221320 Rroxscaffold_3G00267970
rosa_rugosa	Rorug05G0092000
rosa_samantha	Rh1CG252000 Rh3AG320300 Rh5AG483500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2681
AatII	GACGTC	1 cut(s)	848
AccI	GTMKAC	3 cut(s)	1412, 1695, 1768
AccII	CGCG	1 cut(s)	2555
AciI	CCGC	9 cut(s)	191, 213, 612, 1239, 2271, 2370, 2623, 2657, 2691
AclWI	GGATC	7 cut(s)	167, 1155, 1168, 1484, 2282, 2372, 2636
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	3 cut(s)	1544, 1823, 2281
AcuI	CTGAAG	3 cut(s)	117, 1431, 2057
AcyI	GRCGYC	1 cut(s)	845
AfaI	GTAC	1 cut(s)	1783
AfeI	AGCGCT	1 cut(s)	108
AfiI	CCNNNNNNNGG	5 cut(s)	560, 922, 1183, 1778, 2651
AflIII	ACRYGT	1 cut(s)	1597
AjiI	CACGTC	1 cut(s)	1598
AjnI	CCWGG	5 cut(s)	779, 930, 1119, 1163, 1617
AjuI	GAANNNNNNNTTGG	4 cut(s)	494, 526, 2135, 2167
AloI	GAACNNNNNNTCC	2 cut(s)	1545, 1577
Alw21I	GWGCWC	3 cut(s)	345, 996, 2445
Alw26I	GTCTC	4 cut(s)	203, 852, 1062, 1652
AlwI	GGATC	7 cut(s)	167, 1155, 1168, 1484, 2282, 2372, 2636
AlwNI	CAGNNNCTG	2 cut(s)	1454, 2611
Aor51HI	AGCGCT	1 cut(s)	108
AoxI	GGCC	5 cut(s)	141, 2093, 2276, 2588, 2653
ApoI	RAATTY	3 cut(s)	1544, 1823, 2281
ArsI	GACNNNNNNTTYG	2 cut(s)	1821, 1853
AseI	ATTAAT	1 cut(s)	1233
Asp700I	GAANNNNTTC	1 cut(s)	1444
AspLEI	GCGC	3 cut(s)	109, 2375, 2557
AsuHPI	GGTGA	4 cut(s)	182, 490, 626, 920
AsuNHI	GCTAGC	1 cut(s)	1678
AvaII	GGWCC	9 cut(s)	398, 1125, 1244, 1301, 1395, 1790, 2009, 2674, 2683
AxyI	CCTNAGG	1 cut(s)	1248
BaeI	ACNNNNGTAYC	2 cut(s)	2512, 2545
BamHI	GGATCC	1 cut(s)	1160
BanII	GRGCYC	4 cut(s)	345, 996, 1296, 2164
BarI	GAAGNNNNNNTAC	2 cut(s)	747, 779
BauI	CACGAG	2 cut(s)	2599, 2678
BbsI	GAAGAC	3 cut(s)	1600, 2092, 2542
Bbv12I	GWGCWC	3 cut(s)	345, 996, 2445
BbvCI	CCTCAGC	1 cut(s)	866
BccI	CCATC	6 cut(s)	553, 775, 1329, 1814, 2120, 2599
BceAI	ACGGC	1 cut(s)	156
BcgI	CGANNNNNNTGC	2 cut(s)	2219, 2253
BciT130I	CCWGG	5 cut(s)	781, 932, 1121, 1165, 1619
BciVI	GTATCC	2 cut(s)	684, 2513
BcoDI	GTCTC	4 cut(s)	203, 852, 1062, 1652
BfaI	CTAG	4 cut(s)	1565, 1679, 2258, 2639
BfmI	CTRYAG	2 cut(s)	30, 40
BfoI	RGCGCY	1 cut(s)	110
BfuI	GTATCC	2 cut(s)	684, 2513
BglII	AGATCT	2 cut(s)	2002, 2394
Bme1390I	CCNGG	5 cut(s)	781, 932, 1121, 1165, 1619
Bme18I	GGWCC	9 cut(s)	398, 1125, 1244, 1301, 1395, 1790, 2009, 2674, 2683
BmgBI	CACGTC	1 cut(s)	1598
BmiI	GGNNCC	4 cut(s)	760, 1126, 1162, 1396
BmrFI	CCNGG	5 cut(s)	781, 932, 1121, 1165, 1619
BmrI	ACTGGG	2 cut(s)	1401, 1884
BmsI	GCATC	4 cut(s)	419, 441, 1388, 2159
BmtI	GCTAGC	1 cut(s)	1682
BmuI	ACTGGG	2 cut(s)	1401, 1884
BoxI	GACNNNNGTC	1 cut(s)	2058
BpiI	GAAGAC	3 cut(s)	1600, 2092, 2542
Bpu10I	CCTNAGC	2 cut(s)	866, 1704
BpuEI	CTTGAG	1 cut(s)	1535
Bsa29I	ATCGAT	1 cut(s)	413
BsaBI	GATNNNNATC	1 cut(s)	237
BsaHI	GRCGYC	1 cut(s)	845
BsaI	GGTCTC	1 cut(s)	203
BsaJI	CCNNGG	4 cut(s)	1119, 1120, 1201, 1297
BsaWI	WCCGGW	2 cut(s)	694, 2191
BsaXI	ACNNNNNCTCC	2 cut(s)	1414, 1444
Bsc4I	CCNNNNNNNGG	5 cut(s)	560, 922, 1183, 1778, 2651
Bse1I	ACTGG	7 cut(s)	12, 172, 688, 1128, 1211, 1396, 1879
Bse21I	CCTNAGG	1 cut(s)	1248
Bse3DI	GCAATG	2 cut(s)	161, 1354
Bse8I	GATNNNNATC	1 cut(s)	237
BseBI	CCWGG	5 cut(s)	781, 932, 1121, 1165, 1619
BseCI	ATCGAT	1 cut(s)	413
BseDI	CCNNGG	4 cut(s)	1119, 1120, 1201, 1297
BseGI	GGATG	3 cut(s)	1627, 2131, 2174
BseJI	GATNNNNATC	1 cut(s)	237
BseLI	CCNNNNNNNGG	5 cut(s)	560, 922, 1183, 1778, 2651
BseMI	GCAATG	2 cut(s)	161, 1354
BseMII	CTCAG	6 cut(s)	546, 857, 1032, 1262, 1507, 1718
BseNI	ACTGG	7 cut(s)	12, 172, 688, 1128, 1211, 1396, 1879
BseRI	GAGGAG	3 cut(s)	233, 1790, 2153
Bsh1236I	CGCG	1 cut(s)	2555
BshFI	GGCC	5 cut(s)	143, 2095, 2278, 2590, 2655
BshVI	ATCGAT	1 cut(s)	413
BsiHKAI	GWGCWC	3 cut(s)	345, 996, 2445
BsiSI	CCGG	2 cut(s)	695, 2192
BslFI	GGGAC	6 cut(s)	465, 538, 1138, 1408, 1771, 2126
BslI	CCNNNNNNNGG	5 cut(s)	560, 922, 1183, 1778, 2651
BsmAI	GTCTC	4 cut(s)	203, 852, 1062, 1652
BsmBI	CGTCTC	2 cut(s)	852, 1062
BsmFI	GGGAC	6 cut(s)	465, 538, 1138, 1408, 1771, 2126
BsmI	GAATGC	2 cut(s)	118, 1109
BsnI	GGCC	5 cut(s)	143, 2095, 2278, 2590, 2655
Bso31I	GGTCTC	1 cut(s)	203
Bsp1286I	GDGCHC	5 cut(s)	345, 996, 1296, 2164, 2445
Bsp143I	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
BspACI	CCGC	9 cut(s)	191, 213, 612, 1239, 2271, 2370, 2623, 2657, 2691
BspANI	GGCC	5 cut(s)	143, 2095, 2278, 2590, 2655
BspCNI	CTCAG	6 cut(s)	547, 858, 1033, 1261, 1506, 1717
BspDI	ATCGAT	1 cut(s)	413
BspFNI	CGCG	1 cut(s)	2555
BspHI	TCATGA	1 cut(s)	1227
BspLI	GGNNCC	4 cut(s)	760, 1126, 1162, 1396
BspMAI	CTGCAG	2 cut(s)	34, 44
BspOI	GCTAGC	1 cut(s)	1682
BspPI	GGATC	7 cut(s)	167, 1155, 1168, 1484, 2282, 2372, 2636
BspQI	GCTCTTC	2 cut(s)	333, 1980
BspTNI	GGTCTC	1 cut(s)	203
BsrDI	GCAATG	2 cut(s)	161, 1354
BsrI	ACTGG	7 cut(s)	12, 172, 688, 1128, 1211, 1396, 1879
BssECI	CCNNGG	4 cut(s)	1119, 1120, 1201, 1297
BssMI	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
BssNAI	GTATAC	3 cut(s)	1413, 1696, 1769
BssNI	GRCGYC	1 cut(s)	845
BssSI	CACGAG	2 cut(s)	2599, 2678
BssT1I	CCWWGG	1 cut(s)	1297
Bst1107I	GTATAC	3 cut(s)	1413, 1696, 1769
Bst2BI	CACGAG	2 cut(s)	2599, 2678
Bst2UI	CCWGG	5 cut(s)	781, 932, 1121, 1165, 1619
Bst4CI	ACNGT	6 cut(s)	777, 1202, 1368, 1534, 1837, 2347
Bst6I	CTCTTC	5 cut(s)	333, 823, 1065, 1980, 2579
BstACI	GRCGYC	1 cut(s)	845
BstC8I	GCNNGC	4 cut(s)	40, 996, 1680, 2657
BstDEI	CTNAG	7 cut(s)	555, 608, 866, 1041, 1248, 1493, 1704
BstDSI	CCRYGG	1 cut(s)	1201
BstF5I	GGATG	3 cut(s)	1627, 2131, 2174
BstFNI	CGCG	1 cut(s)	2555
BstH2I	RGCGCY	1 cut(s)	110
BstHHI	GCGC	3 cut(s)	109, 2375, 2557
BstKTI	GATC	9 cut(s)	175, 1163, 1479, 2005, 2290, 2367, 2397, 2632, 2644
BstMAI	GTCTC	4 cut(s)	203, 852, 1062, 1652
BstMBI	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
BstMWI	GCNNNNNNNGC	7 cut(s)	35, 113, 1194, 1556, 1811, 2336, 2656
BstNI	CCWGG	5 cut(s)	781, 932, 1121, 1165, 1619
BstPAI	GACNNNNGTC	1 cut(s)	2058
BstSCI	CCNGG	5 cut(s)	779, 930, 1119, 1163, 1617
BstSFI	CTRYAG	2 cut(s)	30, 40
BstUI	CGCG	1 cut(s)	2555
BstV2I	GAAGAC	3 cut(s)	1600, 2092, 2542
BstX2I	RGATCY	5 cut(s)	1160, 1476, 2002, 2394, 2641
BstYI	RGATCY	5 cut(s)	1160, 1476, 2002, 2394, 2641
BstZ17I	GTATAC	3 cut(s)	1413, 1696, 1769
Bsu15I	ATCGAT	1 cut(s)	413
Bsu36I	CCTNAGG	1 cut(s)	1248
BsuI	GTATCC	2 cut(s)	684, 2513
BsuRI	GGCC	5 cut(s)	143, 2095, 2278, 2590, 2655
BsuTUI	ATCGAT	1 cut(s)	413
BtgI	CCRYGG	1 cut(s)	1201
BtgZI	GCGATG	1 cut(s)	2366
BtrI	CACGTC	1 cut(s)	1598
BtsCI	GGATG	3 cut(s)	1627, 2131, 2174
BtsI	GCAGTG	1 cut(s)	187
BtsIMutI	CAGTG	8 cut(s)	5, 187, 681, 773, 1135, 1816, 1965, 2343
Cac8I	GCNNGC	4 cut(s)	40, 996, 1680, 2657
CaiI	CAGNNNCTG	2 cut(s)	1454, 2611
CciI	TCATGA	1 cut(s)	1227
CfoI	GCGC	3 cut(s)	109, 2375, 2557
ClaI	ATCGAT	1 cut(s)	413
Csp6I	GTAC	1 cut(s)	1782
CviAII	CATG	3 cut(s)	177, 224, 1228
CviQI	GTAC	1 cut(s)	1782
DdeI	CTNAG	7 cut(s)	555, 608, 866, 1041, 1248, 1493, 1704
DpnI	GATC	9 cut(s)	174, 1162, 1478, 2004, 2289, 2366, 2396, 2631, 2643
DpnII	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
DraI	TTTAAA	1 cut(s)	570
DrdI	GACNNNNNNGTC	1 cut(s)	2681
DseDI	GACNNNNNNGTC	1 cut(s)	2681
EaeI	YGGCCR	1 cut(s)	141
Eam1104I	CTCTTC	5 cut(s)	333, 823, 1065, 1980, 2579
EarI	CTCTTC	5 cut(s)	333, 823, 1065, 1980, 2579
Ecl136II	GAGCTC	2 cut(s)	343, 994
Eco130I	CCWWGG	1 cut(s)	1297
Eco24I	GRGCYC	4 cut(s)	345, 996, 1296, 2164
Eco31I	GGTCTC	1 cut(s)	203
Eco32I	GATATC	1 cut(s)	1260
Eco47I	GGWCC	9 cut(s)	398, 1125, 1244, 1301, 1395, 1790, 2009, 2674, 2683
Eco47III	AGCGCT	1 cut(s)	108
Eco53kI	GAGCTC	2 cut(s)	343, 994
Eco57I	CTGAAG	3 cut(s)	117, 1431, 2057
Eco81I	CCTNAGG	1 cut(s)	1248
EcoICRI	GAGCTC	2 cut(s)	343, 994
EcoO109I	RGGNCCY	1 cut(s)	398
EcoRI	GAATTC	1 cut(s)	1823
EcoRII	CCWGG	5 cut(s)	779, 930, 1119, 1163, 1617
EcoRV	GATATC	1 cut(s)	1260
EcoT14I	CCWWGG	1 cut(s)	1297
EcoT22I	ATGCAT	1 cut(s)	2174
EcoT38I	GRGCYC	4 cut(s)	345, 996, 1296, 2164
ErhI	CCWWGG	1 cut(s)	1297
Esp3I	CGTCTC	2 cut(s)	852, 1062
FaeI	CATG	3 cut(s)	180, 227, 1231
FalI	AAGNNNNNCTT	4 cut(s)	2135, 2167, 2396, 2428
FaqI	GGGAC	6 cut(s)	465, 538, 1138, 1408, 1771, 2126
FatI	CATG	3 cut(s)	176, 223, 1227
FauI	CCCGC	2 cut(s)	2616, 2664
FauNDI	CATATG	1 cut(s)	2174
FblI	GTMKAC	3 cut(s)	1412, 1695, 1768
FokI	GGATG	3 cut(s)	1634, 2138, 2181
FriOI	GRGCYC	4 cut(s)	345, 996, 1296, 2164
FspBI	CTAG	4 cut(s)	1565, 1679, 2258, 2639
GlaI	GCGC	3 cut(s)	108, 2374, 2556
HaeII	RGCGCY	1 cut(s)	110
HaeIII	GGCC	5 cut(s)	143, 2095, 2278, 2590, 2655
HapII	CCGG	2 cut(s)	695, 2192
HhaI	GCGC	3 cut(s)	109, 2375, 2557
Hin1I	GRCGYC	1 cut(s)	845
Hin1II	CATG	3 cut(s)	180, 227, 1231
Hin6I	GCGC	3 cut(s)	107, 2373, 2555
HinP1I	GCGC	3 cut(s)	107, 2373, 2555
HincII	GTYRAC	1 cut(s)	2350
HindII	GTYRAC	1 cut(s)	2350
HindIII	AAGCTT	3 cut(s)	719, 1538, 2072
HinfI	GANTC	4 cut(s)	269, 619, 887, 1043
HpaII	CCGG	2 cut(s)	695, 2192
HphI	GGTGA	4 cut(s)	182, 490, 626, 920
Hpy166II	GTNNAC	9 cut(s)	185, 928, 1216, 1413, 1696, 1769, 2210, 2350, 2674
Hpy8I	GTNNAC	9 cut(s)	185, 928, 1216, 1413, 1696, 1769, 2210, 2350, 2674
HpyCH4III	ACNGT	6 cut(s)	777, 1202, 1368, 1534, 1837, 2347
HpyCH4IV	ACGT	2 cut(s)	845, 1597
HpyF10VI	GCNNNNNNNGC	7 cut(s)	35, 113, 1194, 1556, 1811, 2336, 2656
HpyF3I	CTNAG	7 cut(s)	555, 608, 866, 1041, 1248, 1493, 1704
HpySE526I	ACGT	2 cut(s)	845, 1597
Hsp92I	GRCGYC	1 cut(s)	845
Hsp92II	CATG	3 cut(s)	180, 227, 1231
HspAI	GCGC	3 cut(s)	107, 2373, 2555
Kzo9I	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
LguI	GCTCTTC	2 cut(s)	333, 1980
LmnI	GCTCC	2 cut(s)	331, 2440
LweI	GCATC	4 cut(s)	419, 441, 1388, 2159
MaeI	CTAG	4 cut(s)	1565, 1679, 2258, 2639
MaeII	ACGT	2 cut(s)	845, 1597
MaeIII	GTNAC	2 cut(s)	3, 1318
MalI	GATC	9 cut(s)	174, 1162, 1478, 2004, 2289, 2366, 2396, 2631, 2643
MboI	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
MflI	RGATCY	5 cut(s)	1160, 1476, 2002, 2394, 2641
MhlI	GDGCHC	5 cut(s)	345, 996, 1296, 2164, 2445
MlyI	GAGTC	1 cut(s)	1052
MmeI	TCCRAC	2 cut(s)	924, 2547
Mph1103I	ATGCAT	1 cut(s)	2174
MroXI	GAANNNNTTC	1 cut(s)	1444
MslI	CAYNNNNRTG	1 cut(s)	228
MspA1I	CMGCKG	2 cut(s)	2271, 2696
MspI	CCGG	2 cut(s)	695, 2192
MspR9I	CCNGG	5 cut(s)	781, 932, 1121, 1165, 1619
Mva1269I	GAATGC	2 cut(s)	118, 1109
MvaI	CCWGG	5 cut(s)	781, 932, 1121, 1165, 1619
MvnI	CGCG	1 cut(s)	2555
MwoI	GCNNNNNNNGC	7 cut(s)	35, 113, 1194, 1556, 1811, 2336, 2656
NdeI	CATATG	1 cut(s)	2174
NdeII	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
NheI	GCTAGC	1 cut(s)	1678
NlaIII	CATG	3 cut(s)	180, 227, 1231
NlaIV	GGNNCC	4 cut(s)	760, 1126, 1162, 1396
NmeAIII	GCCGAG	1 cut(s)	2631
NmuCI	GTSAC	2 cut(s)	3, 1318
NsiI	ATGCAT	1 cut(s)	2174
PagI	TCATGA	1 cut(s)	1227
PasI	CCCWGGG	1 cut(s)	1120
PciSI	GCTCTTC	2 cut(s)	333, 1980
PctI	GAATGC	2 cut(s)	118, 1109
PdmI	GAANNNNTTC	1 cut(s)	1444
PfeI	GAWTC	3 cut(s)	269, 619, 887
PfoI	TCCNGGA	1 cut(s)	1617
PleI	GAGTC	1 cut(s)	1051
PpsI	GAGTC	1 cut(s)	1051
PpuMI	RGGWCCY	1 cut(s)	398
PshAI	GACNNNNGTC	1 cut(s)	2058
PshBI	ATTAAT	1 cut(s)	1233
Psp124BI	GAGCTC	2 cut(s)	345, 996
Psp5II	RGGWCCY	1 cut(s)	398
Psp6I	CCWGG	5 cut(s)	779, 930, 1119, 1163, 1617
PspGI	CCWGG	5 cut(s)	779, 930, 1119, 1163, 1617
PspN4I	GGNNCC	4 cut(s)	760, 1126, 1162, 1396
PspPPI	RGGWCCY	1 cut(s)	398
PstI	CTGCAG	2 cut(s)	34, 44
PstNI	CAGNNNCTG	2 cut(s)	1454, 2611
PsuI	RGATCY	5 cut(s)	1160, 1476, 2002, 2394, 2641
PvuII	CAGCTG	1 cut(s)	2696
RsaI	GTAC	1 cut(s)	1783
RsaNI	GTAC	1 cut(s)	1782
RseI	CAYNNNNRTG	1 cut(s)	228
SacI	GAGCTC	2 cut(s)	345, 996
SapI	GCTCTTC	2 cut(s)	333, 1980
Sau3AI	GATC	9 cut(s)	172, 1160, 1476, 2002, 2287, 2364, 2394, 2629, 2641
SchI	GAGTC	1 cut(s)	1052
ScrFI	CCNGG	5 cut(s)	781, 932, 1121, 1165, 1619
SduI	GDGCHC	5 cut(s)	345, 996, 1296, 2164, 2445
SfaNI	GCATC	4 cut(s)	419, 441, 1388, 2159
SfcI	CTRYAG	2 cut(s)	30, 40
SinI	GGWCC	9 cut(s)	398, 1125, 1244, 1301, 1395, 1790, 2009, 2674, 2683
SmiMI	CAYNNNNRTG	1 cut(s)	228
SmlI	CTYRAG	1 cut(s)	1514
SmoI	CTYRAG	1 cut(s)	1514
SsiI	CCGC	9 cut(s)	191, 213, 612, 1239, 2271, 2370, 2623, 2657, 2691
SspI	AATATT	3 cut(s)	136, 657, 880
SspMI	CTAG	4 cut(s)	1565, 1679, 2258, 2639
SstI	GAGCTC	2 cut(s)	345, 996
StyD4I	CCNGG	5 cut(s)	779, 930, 1119, 1163, 1617
StyI	CCWWGG	1 cut(s)	1297
TaaI	ACNGT	6 cut(s)	777, 1202, 1368, 1534, 1837, 2347
TaiI	ACGT	2 cut(s)	848, 1600
TaqI	TCGA	4 cut(s)	413, 2355, 2628, 2665
TaqII	GACCGA	1 cut(s)	1343
TauI	GCSGC	2 cut(s)	2373, 2693
TfiI	GAWTC	3 cut(s)	269, 619, 887
TscAI	CASTG	8 cut(s)	12, 187, 688, 780, 1135, 1816, 1972, 2350
TseFI	GTSAC	2 cut(s)	3, 1318
Tsp45I	GTSAC	2 cut(s)	3, 1318
TspDTI	ATGAA	9 cut(s)	40, 213, 1001, 1216, 1416, 1476, 1998, 2369, 2422
TspGWI	ACGGA	2 cut(s)	1666, 2181
TspRI	CASTG	8 cut(s)	12, 187, 688, 780, 1135, 1816, 1972, 2350
VpaK11BI	GGWCC	9 cut(s)	398, 1125, 1244, 1301, 1395, 1790, 2009, 2674, 2683
VspI	ATTAAT	1 cut(s)	1233
XapI	RAATTY	3 cut(s)	1544, 1823, 2281
XbaI	TCTAGA	1 cut(s)	2257
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2598
XmiI	GTMKAC	3 cut(s)	1412, 1695, 1768
XmnI	GAANNNNTTC	1 cut(s)	1444
XspI	CTAG	4 cut(s)	1565, 1679, 2258, 2639
ZraI	GACGTC	1 cut(s)	846
Zsp2I	ATGCAT	1 cut(s)	2174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.