Rmu_sc0004507.1_g000012

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004507.1
OG0014060
Physical Location & Seq
Forward (+)
57754 .. 65501
7748 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1995 bp
ctgcacagaacgactcgtctcctccttctggtcgtctctgtggcatcctcttgtggcgataaccacccagaacggctcagcaaggcggtgcagcttggtgttttcggacctgaccggaaaacacagttccggccacgtcaaggcttcaggcttccatctttggcttcgtgggggtcgtctgagtcgatctatggtgtttgtttcgatcgatttacgtggaaatcggttcaactcagtccggattactgttcacgggtacttgacgaagtatttggacggttattctgtggtttgactacttattctgcatttaagacacagcaggagtttcaagatggtgaccttaatgttgattttgagaccagacggggtctgaaaccacatgtcacagatggtgacaggtcgcagaaggtgaccaaggcaggaaatagccattttcgacttcttccgatcgtcttcgatctgtcctttgtgtttctggagaagctatcatcgctcaagggtaacaattttgccaacgtgtttttgaagctgaatattaccgatcaagttccatctctccgagctcagagtgacgatgaagcaagagcgagacggagcaacaaacatagaggaactgacaaatcagatgatagggatagtgagggtgttaaggttgagattgccgattcaggaccgtctgatgaatatgaagatcgtgaagacttctccaatcagccaaaaatgattggattagaaatccaatccaatccatggtgccaaacacaacctaagagagaagatccaatgaggcttgtgcaccaattcgatcccgccaccaacacccactccttcctcactcccccgactccccacctccaaatccagccgttcgatctcccatcaacggccagcattctccagacccactccgccgtctccccattccatcaaatcttcgagcacgagctcaatctcaacacgtggcgcgaccccgatcctccgtcggccggcaccgacgtgttgttcgccagcacgtacacgctcagcgagtcccagtgggccctggtgctccggctgcacacgtcagcgtgcgaccgcgcgtcggcggcggcgctgctgaaggagctgttggggtgggttgggggaggagggacagagagggaattaaaaggaaatggggaggttatttcggcacttgaggatctgatcccaaatgggaaggcgaacaagccgttctgggcgcgtggggtggacatgcttgggtactctttgaattcgttcaggctgtccaatatagagttcaaagacgtgaatttgccgaggacgacccagatggtgaagttgcggcttaacccagaacacactgataagcttcttgctggttgcaagtccaggggaataaaactttgcgggctgctggcagctgctggattgattgccgcgcatgcctctaagcaccttcccgatcatcaatgggaaaagtatgctgtagtaacgcttcttgactgccgttcacttcttgatccaccactttctgccaatgattttggtttttatcattctgccatcatgaattcacatgacataaacggagaaaacacactgtgggagctggcaaagagatgctacaccgcctttgcagatgccaagaattctaacaagcatttctcagacatgtcagacctgaacttcctcatgtgcaaggctatcgaaaaccctggtttgactccatcatcgtcgatgagaactgcctttgtctcggtgtttgaggacctagtgatcgatgattccagtgaagtgcaccaagagcttgggttggaggactacgaggggtgcgcttcagtccatggtgttggcccttccatagctatttttgacgccatacgtgatggaggattgaattgtgcatgtgtttatccgtcgcccttgcattcaagggaacaaatgcaaggcttgatggatcatatgaagagcgttcttgtagatggttgtaatgttgacagcgagagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AATase

Protein Analysis

664

Amino Acids

73.79

Weight (kDa)

5.76

Isoelectric Point (pI)

34.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PapA_C PF16911 436 - 540 9.9e-10 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014060)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52610
fragaria_vesca FvH4_6g19190
malus_domestica MD12G1027700.v1.1
prunus_persica Prupe.7G103700_v2.0.a1 Prupe.7G103700_v2.0.a1 Prupe.7G103900_v2.0.a1
pyrus_communis pycom12g02650
rosa_chinensis RchiOBHm_Chr3g0474311
rosa_laevigata RLG00000023933
rosa_multiflora Rmu_sc0004507.1_g000012
rosa_roxburghii Rroxscaffold_6G00407370
rosa_rugosa Rorug03G0140000
rosa_samantha Rh3AG190700 Rh3BG219900 Rh3CG215100 Rh3DG215600
rosa_wichuraiana Rw3G017400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 756, 992
AccB7I CCANNNNNTGG 1 cut(s) 753
AccII CGCG 5 cut(s) 969, 1080, 1082, 1225, 1424
AccIII TCCGGA 1 cut(s) 238
AclWI GGATC 7 cut(s) 776, 803, 971, 1183, 1191, 1499, 1950
AcoI YGGCCR 3 cut(s) 131, 888, 987
AcsI RAATTY 4 cut(s) 1255, 1294, 1555, 1633
AcuI CTGAAG 3 cut(s) 130, 1121, 1806
AcvI CACGTG 1 cut(s) 963
AcyI GRCGYC 1 cut(s) 1860
AdeI CACNNNGTG 1 cut(s) 1587
AfaI GTAC 3 cut(s) 258, 1019, 1247
AfiI CCNNNNNNNGG 6 cut(s) 28, 140, 753, 886, 989, 1084
AflIII ACRYGT 6 cut(s) 382, 519, 960, 999, 1062, 1656
AgsI TTSAA 7 cut(s) 230, 332, 529, 1255, 1285, 1882, 1917
AhdI GACNNNNNGTC 1 cut(s) 1081
AjiI CACGTC 4 cut(s) 137, 1000, 1065, 1291
AjnI CCWGG 3 cut(s) 1044, 1373, 1699
AjuI GAANNNNNNNTTGG 4 cut(s) 1094, 1126, 1265, 1297
AleI CACNNNNGTG 1 cut(s) 998
Alw21I GWGCWC 6 cut(s) 568, 801, 945, 951, 1053, 1785
Alw26I GTCTC 6 cut(s) 23, 40, 353, 586, 922, 1744
Alw44I GTGCAC 2 cut(s) 797, 1781
AlwI GGATC 7 cut(s) 776, 803, 971, 1183, 1191, 1499, 1950
AlwNI CAGNNNCTG 1 cut(s) 1409
Aor13HI TCCGGA 1 cut(s) 238
AoxI GGCC 5 cut(s) 131, 888, 987, 1041, 1837
ApaI GGGCCC 1 cut(s) 1045
ApaLI GTGCAC 2 cut(s) 797, 1781
ApeKI GCWGC 6 cut(s) 91, 1057, 1096, 1396, 1403, 1406
ApoI RAATTY 4 cut(s) 1255, 1294, 1555, 1633
ArsI GACNNNNNNTTYG 4 cut(s) 254, 286, 989, 1021
Asp700I GAANNNNTTC 1 cut(s) 1259
AspLEI GCGC 6 cut(s) 969, 1082, 1096, 1225, 1426, 1820
AspS9I GGNCC 6 cut(s) 107, 674, 1041, 1042, 1753, 1838
AsuHPI GGTGA 4 cut(s) 350, 407, 424, 1330
AvaII GGWCC 3 cut(s) 107, 674, 1753
BaeGI GKGCMC 3 cut(s) 801, 1045, 1785
BanI GGYRCC 2 cut(s) 756, 992
BanII GRGCYC 3 cut(s) 568, 951, 1045
BarI GAAGNNNNNNTAC 2 cut(s) 1464, 1496
BauI CACGAG 1 cut(s) 944
BbrPI CACGTG 1 cut(s) 963
BbsI GAAGAC 2 cut(s) 448, 708
Bbv12I GWGCWC 6 cut(s) 568, 801, 945, 951, 1053, 1785
BbvI GCAGC 6 cut(s) 103, 1044, 1083, 1383, 1393, 1415
BceAI ACGGC 6 cut(s) 89, 853, 899, 903, 1198, 1476
BcgI CGANNNNNNTGC 2 cut(s) 1672, 1706
BciT130I CCWGG 3 cut(s) 1046, 1375, 1701
BcoDI GTCTC 6 cut(s) 23, 40, 353, 586, 922, 1744
BfaI CTAG 2 cut(s) 1757, 1993
BfmI CTRYAG 1 cut(s) 1470
BfoI RGCGCY 1 cut(s) 1097
BlpI GCTNAGC 2 cut(s) 77, 1025
Bme1390I CCNGG 3 cut(s) 1046, 1375, 1701
Bme18I GGWCC 3 cut(s) 107, 674, 1753
BmeRI GACNNNNNGTC 1 cut(s) 1081
BmgBI CACGTC 4 cut(s) 137, 1000, 1065, 1291
BmgT120I GGNCC 6 cut(s) 107, 674, 1041, 1042, 1753, 1838
BmiI GGNNCC 3 cut(s) 758, 994, 1043
BmrFI CCNGG 3 cut(s) 1046, 1375, 1701
BmrI ACTGGG 1 cut(s) 1030
BmsI GCATC 3 cut(s) 53, 1595, 1615
BmuI ACTGGG 1 cut(s) 1030
BpiI GAAGAC 2 cut(s) 448, 708
BpmI CTGGAG 2 cut(s) 500, 884
Bpu1102I GCTNAGC 2 cut(s) 77, 1025
BpuEI CTTGAG 2 cut(s) 482, 1199
Bsa29I ATCGAT 2 cut(s) 208, 1764
BsaAI YACGTR 4 cut(s) 216, 963, 1017, 1868
BsaHI GRCGYC 1 cut(s) 1860
BsaI GGTCTC 1 cut(s) 353
BsaJI CCNNGG 7 cut(s) 417, 752, 1044, 1301, 1374, 1699, 1828
BsaWI WCCGGW 2 cut(s) 114, 238
BsaXI ACNNNNNCTCC 2 cut(s) 812, 842
Bsc4I CCNNNNNNNGG 6 cut(s) 28, 140, 753, 886, 989, 1084
Bse118I RCCGGY 1 cut(s) 989
Bse1I ACTGG 2 cut(s) 1036, 1773
BseAI TCCGGA 1 cut(s) 238
BseBI CCWGG 3 cut(s) 1046, 1375, 1701
BseCI ATCGAT 2 cut(s) 208, 1764
BseDI CCNNGG 7 cut(s) 417, 752, 1044, 1301, 1374, 1699, 1828
BseGI GGATG 1 cut(s) 44
BseLI CCNNNNNNNGG 6 cut(s) 28, 140, 753, 886, 989, 1084
BseMII CTCAG 6 cut(s) 91, 171, 247, 581, 1039, 1665
BseNI ACTGG 2 cut(s) 1036, 1773
BseRI GAGGAG 2 cut(s) 11, 1143
BseSI GKGCMC 3 cut(s) 801, 1045, 1785
BseX3I CGGCCG 1 cut(s) 987
BseXI GCAGC 6 cut(s) 103, 1044, 1083, 1383, 1393, 1415
BsgI GTGCAG 2 cut(s) 110, 1043
Bsh1236I CGCG 5 cut(s) 969, 1080, 1082, 1225, 1424
Bsh1285I CGRYCG 4 cut(s) 208, 453, 990, 1078
BshFI GGCC 5 cut(s) 133, 890, 989, 1043, 1839
BshNI GGYRCC 2 cut(s) 756, 992
BshVI ATCGAT 2 cut(s) 208, 1764
BsiEI CGRYCG 4 cut(s) 208, 453, 990, 1078
BsiHKAI GWGCWC 6 cut(s) 568, 801, 945, 951, 1053, 1785
BsiSI CCGG 5 cut(s) 115, 130, 239, 990, 1054
BslFI GGGAC 2 cut(s) 1018, 1147
BslI CCNNNNNNNGG 6 cut(s) 28, 140, 753, 886, 989, 1084
BsmAI GTCTC 6 cut(s) 23, 40, 353, 586, 922, 1744
BsmBI CGTCTC 4 cut(s) 23, 40, 586, 922
BsmFI GGGAC 2 cut(s) 1018, 1147
BsmI GAATGC 2 cut(s) 894, 1912
BsnI GGCC 5 cut(s) 133, 890, 989, 1043, 1839
Bso31I GGTCTC 1 cut(s) 353
Bsp120I GGGCCC 1 cut(s) 1041
Bsp1286I GDGCHC 7 cut(s) 568, 801, 945, 951, 1045, 1053, 1785
Bsp13I TCCGGA 1 cut(s) 238
Bsp1720I GCTNAGC 2 cut(s) 77, 1025
Bsp19I CCATGG 2 cut(s) 752, 1828
BspANI GGCC 5 cut(s) 133, 890, 989, 1043, 1839
BspCNI CTCAG 6 cut(s) 90, 172, 246, 580, 1038, 1664
BspDI ATCGAT 2 cut(s) 208, 1764
BspEI TCCGGA 1 cut(s) 238
BspFNI CGCG 5 cut(s) 969, 1080, 1082, 1225, 1424
BspHI TCATGA 1 cut(s) 1551
BspLI GGNNCC 3 cut(s) 758, 994, 1043
BspPI GGATC 7 cut(s) 776, 803, 971, 1183, 1191, 1499, 1950
BspQI GCTCTTC 1 cut(s) 1946
BspT107I GGYRCC 2 cut(s) 756, 992
BspTNI GGTCTC 1 cut(s) 353
BsrFI RCCGGY 1 cut(s) 989
BsrI ACTGG 2 cut(s) 1036, 1773
BssAI RCCGGY 1 cut(s) 989
BssECI CCNNGG 7 cut(s) 417, 752, 1044, 1301, 1374, 1699, 1828
BssNI GRCGYC 1 cut(s) 1860
BssSI CACGAG 1 cut(s) 944
BssT1I CCWWGG 3 cut(s) 417, 752, 1828
Bst2BI CACGAG 1 cut(s) 944
Bst2UI CCWGG 3 cut(s) 1046, 1375, 1701
Bst4CI ACNGT 5 cut(s) 126, 248, 279, 678, 1587
Bst6I CTCTTC 1 cut(s) 1946
BstACI GRCGYC 1 cut(s) 1860
BstBAI YACGTR 4 cut(s) 216, 963, 1017, 1868
BstC8I GCNNGC 8 cut(s) 892, 991, 1012, 1072, 1394, 1401, 1428, 1596
BstDEI CTNAG 8 cut(s) 77, 180, 233, 567, 771, 1025, 1434, 1651
BstDSI CCRYGG 2 cut(s) 752, 1828
BstEII GGTNACC 2 cut(s) 338, 412
BstF5I GGATG 1 cut(s) 44
BstFNI CGCG 5 cut(s) 969, 1080, 1082, 1225, 1424
BstH2I RGCGCY 1 cut(s) 1097
BstHHI GCGC 6 cut(s) 969, 1082, 1096, 1225, 1426, 1820
BstMAI GTCTC 6 cut(s) 23, 40, 353, 586, 922, 1744
BstMCI CGRYCG 4 cut(s) 208, 453, 990, 1078
BstMWI GCNNNNNNNGC 6 cut(s) 493, 1057, 1088, 1105, 1427, 1789
BstNI CCWGG 3 cut(s) 1046, 1375, 1701
BstNSI RCATGY 5 cut(s) 386, 1240, 1430, 1660, 1893
BstPI GGTNACC 2 cut(s) 338, 412
BstSCI CCNGG 3 cut(s) 1044, 1373, 1699
BstSFI CTRYAG 1 cut(s) 1470
BstSLI GKGCMC 3 cut(s) 801, 1045, 1785
BstUI CGCG 5 cut(s) 969, 1080, 1082, 1225, 1424
BstV1I GCAGC 6 cut(s) 103, 1044, 1083, 1383, 1393, 1415
BstV2I GAAGAC 2 cut(s) 448, 708
BstX2I RGATCY 2 cut(s) 781, 1183
BstXI CCANNNNNNTGG 2 cut(s) 1793, 1835
BstYI RGATCY 2 cut(s) 781, 1183
BstZI CGGCCG 1 cut(s) 987
Bsu15I ATCGAT 2 cut(s) 208, 1764
BsuRI GGCC 5 cut(s) 133, 890, 989, 1043, 1839
BsuTUI ATCGAT 2 cut(s) 208, 1764
BtgI CCRYGG 2 cut(s) 752, 1828
BtgZI GCGATG 1 cut(s) 477
BtrI CACGTC 4 cut(s) 137, 1000, 1065, 1291
BtsCI GGATG 1 cut(s) 44
BtsIMutI CAGTG 4 cut(s) 1043, 1344, 1583, 1780
Cac8I GCNNGC 8 cut(s) 892, 991, 1012, 1072, 1394, 1401, 1428, 1596
CaiI CAGNNNCTG 1 cut(s) 1409
CciI TCATGA 1 cut(s) 1551
CfoI GCGC 6 cut(s) 969, 1082, 1096, 1225, 1426, 1820
Cfr10I RCCGGY 1 cut(s) 989
Cfr13I GGNCC 6 cut(s) 107, 674, 1041, 1042, 1753, 1838
ClaI ATCGAT 2 cut(s) 208, 1764
CseI GACGC 2 cut(s) 1071, 1868
Csp6I GTAC 3 cut(s) 257, 1018, 1246
CviQI GTAC 3 cut(s) 257, 1018, 1246
DdeI CTNAG 8 cut(s) 77, 180, 233, 567, 771, 1025, 1434, 1651
DraIII CACNNNGTG 1 cut(s) 1587
DriI GACNNNNNGTC 1 cut(s) 1081
EaeI YGGCCR 3 cut(s) 131, 888, 987
EagI CGGCCG 1 cut(s) 987
Eam1104I CTCTTC 1 cut(s) 1946
Eam1105I GACNNNNNGTC 1 cut(s) 1081
EarI CTCTTC 1 cut(s) 1946
EciI GGCGGA 1 cut(s) 901
Ecl136II GAGCTC 2 cut(s) 566, 949
EclXI CGGCCG 1 cut(s) 987
Eco130I CCWWGG 3 cut(s) 417, 752, 1828
Eco24I GRGCYC 3 cut(s) 568, 951, 1045
Eco31I GGTCTC 1 cut(s) 353
Eco47I GGWCC 3 cut(s) 107, 674, 1753
Eco52I CGGCCG 1 cut(s) 987
Eco53kI GAGCTC 2 cut(s) 566, 949
Eco57I CTGAAG 3 cut(s) 130, 1121, 1806
Eco72I CACGTG 1 cut(s) 963
Eco91I GGTNACC 2 cut(s) 338, 412
EcoICRI GAGCTC 2 cut(s) 566, 949
EcoO109I RGGNCCY 2 cut(s) 1042, 1753
EcoO65I GGTNACC 2 cut(s) 338, 412
EcoRI GAATTC 3 cut(s) 1255, 1555, 1633
EcoRII CCWGG 3 cut(s) 1044, 1373, 1699
EcoT14I CCWWGG 3 cut(s) 417, 752, 1828
EcoT38I GRGCYC 3 cut(s) 568, 951, 1045
ErhI CCWWGG 3 cut(s) 417, 752, 1828
Esp3I CGTCTC 4 cut(s) 23, 40, 586, 922
FaqI GGGAC 2 cut(s) 1018, 1147
FauI CCCGC 2 cut(s) 820, 1385
FauNDI CATATG 1 cut(s) 1947
FokI GGATG 1 cut(s) 31
FriOI GRGCYC 3 cut(s) 568, 951, 1045
FspBI CTAG 2 cut(s) 1757, 1993
GlaI GCGC 6 cut(s) 968, 1081, 1095, 1224, 1425, 1819
GsuI CTGGAG 2 cut(s) 500, 884
HaeII RGCGCY 1 cut(s) 1097
HaeIII GGCC 5 cut(s) 133, 890, 989, 1043, 1839
HapII CCGG 5 cut(s) 115, 130, 239, 990, 1054
HgaI GACGC 2 cut(s) 1071, 1868
HhaI GCGC 6 cut(s) 969, 1082, 1096, 1225, 1426, 1820
Hin1I GRCGYC 1 cut(s) 1860
Hin6I GCGC 6 cut(s) 967, 1080, 1094, 1223, 1424, 1818
HinP1I GCGC 6 cut(s) 967, 1080, 1094, 1223, 1424, 1818
HincII GTYRAC 1 cut(s) 1981
HindII GTYRAC 1 cut(s) 1981
HindIII AAGCTT 1 cut(s) 1352
HinfI GANTC 7 cut(s) 13, 182, 668, 847, 1031, 1708, 1769
HpaII CCGG 5 cut(s) 115, 130, 239, 990, 1054
HphI GGTGA 4 cut(s) 350, 407, 424, 1330
Hpy166II GTNNAC 7 cut(s) 251, 799, 1020, 1234, 1496, 1783, 1981
Hpy8I GTNNAC 7 cut(s) 251, 799, 1020, 1234, 1496, 1783, 1981
Hpy99I CGWCG 5 cut(s) 988, 1001, 1087, 1723, 1906
HpyAV CCTTC 7 cut(s) 35, 403, 841, 1096, 1195, 1451, 1851
HpyCH4III ACNGT 5 cut(s) 126, 248, 279, 678, 1587
HpyCH4IV ACGT 9 cut(s) 136, 215, 519, 962, 999, 1016, 1064, 1290, 1867
HpyF10VI GCNNNNNNNGC 6 cut(s) 493, 1057, 1088, 1105, 1427, 1789
HpyF3I CTNAG 8 cut(s) 77, 180, 233, 567, 771, 1025, 1434, 1651
HpySE526I ACGT 9 cut(s) 136, 215, 519, 962, 999, 1016, 1064, 1290, 1867
Hsp92I GRCGYC 1 cut(s) 1860
HspAI GCGC 6 cut(s) 967, 1080, 1094, 1223, 1424, 1818
Kpn2I TCCGGA 1 cut(s) 238
KroI GCCGGC 1 cut(s) 989
KroNI GCCGGC 1 cut(s) 991
LguI GCTCTTC 1 cut(s) 1946
LmnI GCTCC 4 cut(s) 597, 1056, 1105, 1591
Lsp1109I GCAGC 6 cut(s) 103, 1044, 1083, 1383, 1393, 1415
LweI GCATC 3 cut(s) 53, 1595, 1615
MaeI CTAG 2 cut(s) 1757, 1993
MaeII ACGT 9 cut(s) 136, 215, 519, 962, 999, 1016, 1064, 1290, 1867
MaeIII GTNAC 7 cut(s) 338, 385, 395, 412, 503, 572, 1474
MboII GAAGA 7 cut(s) 437, 448, 704, 713, 791, 928, 1963
MflI RGATCY 2 cut(s) 781, 1183
MhlI GDGCHC 7 cut(s) 568, 801, 945, 951, 1045, 1053, 1785
MluCI AATT 8 cut(s) 508, 803, 1145, 1255, 1294, 1555, 1633, 1882
MlyI GAGTC 5 cut(s) 7, 191, 841, 1040, 1702
MmeI TCCRAC 1 cut(s) 1779
MroI TCCGGA 1 cut(s) 238
MroNI GCCGGC 1 cut(s) 989
MroXI GAANNNNTTC 1 cut(s) 1259
MseI TTAA 5 cut(s) 312, 345, 651, 1148, 1332
MslI CAYNNNNRTG 1 cut(s) 998
MspA1I CMGCKG 1 cut(s) 1406
MspI CCGG 5 cut(s) 115, 130, 239, 990, 1054
MspR9I CCNGG 3 cut(s) 1046, 1375, 1701
Mva1269I GAATGC 2 cut(s) 894, 1912
MvaI CCWGG 3 cut(s) 1046, 1375, 1701
MvnI CGCG 5 cut(s) 969, 1080, 1082, 1225, 1424
MwoI GCNNNNNNNGC 6 cut(s) 493, 1057, 1088, 1105, 1427, 1789
NaeI GCCGGC 1 cut(s) 991
NcoI CCATGG 2 cut(s) 752, 1828
NdeI CATATG 1 cut(s) 1947
NgoMIV GCCGGC 1 cut(s) 989
NlaIV GGNNCC 3 cut(s) 758, 994, 1043
NmeAIII GCCGAG 1 cut(s) 1326
NmuCI GTSAC 5 cut(s) 338, 385, 395, 412, 572
NspI RCATGY 5 cut(s) 386, 1240, 1430, 1660, 1893
OliI CACNNNNGTG 1 cut(s) 998
PaeI GCATGC 1 cut(s) 1430
PagI TCATGA 1 cut(s) 1551
PciI ACATGT 2 cut(s) 382, 1656
PciSI GCTCTTC 1 cut(s) 1946
PcsI WCGNNNNNNNCGW 2 cut(s) 173, 182
PctI GAATGC 2 cut(s) 894, 1912
PdiI GCCGGC 1 cut(s) 991
PdmI GAANNNNTTC 1 cut(s) 1259
PfeI GAWTC 2 cut(s) 668, 1769
PflFI GACNNNGTC 1 cut(s) 369
PflMI CCANNNNNTGG 1 cut(s) 753
Ple19I CGATCG 2 cut(s) 208, 453
PleI GAGTC 5 cut(s) 7, 190, 841, 1039, 1702
PmaCI CACGTG 1 cut(s) 963
PmlI CACGTG 1 cut(s) 963
PpsI GAGTC 5 cut(s) 7, 190, 841, 1039, 1702
Ppu21I YACGTR 4 cut(s) 216, 963, 1017, 1868
PpuMI RGGWCCY 1 cut(s) 1753
PscI ACATGT 2 cut(s) 382, 1656
Psp124BI GAGCTC 2 cut(s) 568, 951
Psp5II RGGWCCY 1 cut(s) 1753
Psp6I CCWGG 3 cut(s) 1044, 1373, 1699
PspCI CACGTG 1 cut(s) 963
PspEI GGTNACC 2 cut(s) 338, 412
PspGI CCWGG 3 cut(s) 1044, 1373, 1699
PspN4I GGNNCC 3 cut(s) 758, 994, 1043
PspOMI GGGCCC 1 cut(s) 1041
PspPI GGNCC 6 cut(s) 107, 674, 1041, 1042, 1753, 1838
PspPPI RGGWCCY 1 cut(s) 1753
PstNI CAGNNNCTG 1 cut(s) 1409
PsuI RGATCY 2 cut(s) 781, 1183
PsyI GACNNNGTC 1 cut(s) 369
PvuI CGATCG 2 cut(s) 208, 453
PvuII CAGCTG 1 cut(s) 1406
RsaI GTAC 3 cut(s) 258, 1019, 1247
RsaNI GTAC 3 cut(s) 257, 1018, 1246
RseI CAYNNNNRTG 1 cut(s) 998
SacI GAGCTC 2 cut(s) 568, 951
SapI GCTCTTC 1 cut(s) 1946
SaqAI TTAA 5 cut(s) 312, 345, 651, 1148, 1332
Sau96I GGNCC 6 cut(s) 107, 674, 1041, 1042, 1753, 1838
SchI GAGTC 5 cut(s) 7, 191, 841, 1040, 1702
ScrFI CCNGG 3 cut(s) 1046, 1375, 1701
SduI GDGCHC 7 cut(s) 568, 801, 945, 951, 1045, 1053, 1785
SfaNI GCATC 3 cut(s) 53, 1595, 1615
SfcI CTRYAG 1 cut(s) 1470
SinI GGWCC 3 cut(s) 107, 674, 1753
SmiMI CAYNNNNRTG 1 cut(s) 998
SmlI CTYRAG 2 cut(s) 497, 1178
SmoI CTYRAG 2 cut(s) 497, 1178
SphI GCATGC 1 cut(s) 1430
Sse9I AATT 8 cut(s) 508, 803, 1145, 1255, 1294, 1555, 1633, 1882
SspI AATATT 1 cut(s) 538
SspMI CTAG 2 cut(s) 1757, 1993
SstI GAGCTC 2 cut(s) 568, 951
StyD4I CCNGG 3 cut(s) 1044, 1373, 1699
StyI CCWWGG 3 cut(s) 417, 752, 1828
TaaI ACNGT 5 cut(s) 126, 248, 279, 678, 1587
TaiI ACGT 9 cut(s) 139, 218, 522, 965, 1002, 1019, 1067, 1293, 1870
TasI AATT 8 cut(s) 508, 803, 1145, 1255, 1294, 1555, 1633, 1882
TauI GCSGC 4 cut(s) 1091, 1094, 1330, 1424
TfiI GAWTC 2 cut(s) 668, 1769
Tru1I TTAA 5 cut(s) 312, 345, 651, 1148, 1332
Tru9I TTAA 5 cut(s) 312, 345, 651, 1148, 1332
TscAI CASTG 4 cut(s) 1043, 1351, 1590, 1780
TseFI GTSAC 5 cut(s) 338, 385, 395, 412, 572
TseI GCWGC 6 cut(s) 91, 1057, 1096, 1396, 1403, 1406
Tsp45I GTSAC 5 cut(s) 338, 385, 395, 412, 572
TspDTI ATGAA 5 cut(s) 594, 699, 705, 1568, 1964
TspGWI ACGGA 4 cut(s) 610, 972, 1587, 1890
TspRI CASTG 4 cut(s) 1043, 1351, 1590, 1780
Tth111I GACNNNGTC 1 cut(s) 369
Van91I CCANNNNNTGG 1 cut(s) 753
VneI GTGCAC 2 cut(s) 797, 1781
VpaK11BI GGWCC 3 cut(s) 107, 674, 1753
XapI RAATTY 4 cut(s) 1255, 1294, 1555, 1633
XceI RCATGY 5 cut(s) 386, 1240, 1430, 1660, 1893
XmnI GAANNNNTTC 1 cut(s) 1259
XspI CTAG 2 cut(s) 1757, 1993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.