Rmu_sc0004523.1_g000013

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004523.1
Physical Location & Seq
Reverse (-)
65660 .. 70047
4388 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004523.1_g000013.1.cds

Sequence Viewer

Length: 2067 bp
atgaaaggaggagccaccactactccacggctccaccagctcgtccgtccagtcccgagcgaggaagacatgagcacccaaagcactatatttatccaaagtctactcaaatccgatgtcatcatcagcagggcaaatggattcaatatgagaggagcgatgggtacttccccacgcgctgttgaagctaggcatcggctatctgcatcatttgaagatatatacagaagaagagtacagaaaagtaaagcaaacgattcagagaagcctttccacttatccatccatgatagaagttcaagatacaagcttcctctgctgagacttgtcctgctaatcgccatatgtggtacttttgtagtgcttctttactctccagaagtttacaacaataaccttccaacacattctgttcctcggtggatatggggtggatcggattctcgatatgaatcaaatttagacattaactgggatgatgtcatgaaagttttggggaggctgactgacaggaatgaatatcaaggaattggcctactaaacttcaacacaagcgaaatcaaccagtggaatcagattgttcctgaagctgccaatgttgttctgcacttggactatgctgcagagaatgtaacttgggaatctttatatccagaatggatagatgaggaggaagaagatggacttccagtttgcccatctctgccaaagctcaaagcacttggcagacggcttgacctcatagctgttaaacttccttgtcggaaagagctaccgaattggtctagagatgttgctcggttgcacctgcagcttgctgctgccggtgttgctgcctcttccaaagggtatcgccatgtgcatttgcttttcgtcaccgactgcttccctattccaaatctgttcagatgcaaagagcttgtggtgcgcgaggggaatgcatggttatacgagccaaacctcaatgtgcttagagaaaaagtgcagctccctgtaggttcctgtgaacttgcacttcctttcagaggcaaagggctggtctactctggcaatgcgcgccgagaagcgtatgcaacaattctccattcagctgatgtttatgtttgtggagccatagctgctgcccaaagcattagaatggcagggtccactcgagaccttgtgatacttgttgatgaaaccattagtggttaccataggagcggactgcaggcagcagggtggatagtgaagacaatagaaaggatcaggaacccgaaagctgagaaagatgcatacaatgaatggaactacagcaagttccggttgtggcagctgacagaatatgacaagatcattttcattgatgctgatttgcttatactcaagaacattgatatcttattttcgatgccagaaatttctgcaacagggaatgatgccacactttttaactccggggtgatggttatcgagccttcaaattgcacattccaccttcttatggatcacattcatgagatagagtcctacaatggtggtgatcagggctacttgaatgaaattttcacatggtggcatagaatacccagacacatgaatttcttaaagcatttttgggatggtgatgaggaagagatgaaacagaagaagaccaagctttttggagccaatcctccaattctttatgtccttcactaccttggagtgaagccatggttgtgctttcgcgactacgattgtaactggaattctgatatatttcaagagtttgcaagtgatgttgctcacgcaagctggtggagagttcatgatgcaatgcctgagctgctgcagcagttttgttttttgaggaccaagcagaaggcacaactggaatgggacagaagggaagccgagaaagctaacttcacagatggacattggaagatcaaaatcaatgaccggcgattaaaaagatgtgtagacaatgtgtgttcttggaagggcatgttgaagcattggggagaaacaaattggactgatgatcagattgtgtacaatccaactccacctgcaattaccgcaacttccatcaccggtttatga

Protein Analysis

688

Amino Acids

79.06

Weight (kDa)

6.75

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014065)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 816, 2041
Acc36I ACCTGC 2 cut(s) 816, 2041
AccBSI CCGCTC 1 cut(s) 1203
AccI GTMKAC 3 cut(s) 103, 1041, 1944
AccII CGCG 4 cut(s) 177, 930, 1057, 1710
AciI CCGC 2 cut(s) 1203, 2043
AclWI GGATC 3 cut(s) 442, 1253, 1494
AcsI RAATTY 5 cut(s) 457, 1398, 1542, 1579, 1729
AcuI CTGAAG 1 cut(s) 606
AdeI CACNNNGTG 1 cut(s) 1554
AfaI GTAC 4 cut(s) 166, 237, 352, 2018
AfiI CCNNNNNNNGG 3 cut(s) 61, 1025, 1483
AgeI ACCGGT 1 cut(s) 2057
AgsI TTSAA 9 cut(s) 145, 185, 215, 300, 547, 1461, 1537, 1745, 1975
Alw21I GWGCWC 1 cut(s) 77
Alw26I GTCTC 2 cut(s) 316, 1149
AlwI GGATC 3 cut(s) 442, 1253, 1494
Ama87I CYCGRG 2 cut(s) 55, 1152
AoxI GGCC 1 cut(s) 532
ApoI RAATTY 5 cut(s) 457, 1398, 1542, 1579, 1729
ArsI GACNNNNNNTTYG 6 cut(s) 102, 134, 675, 707, 1023, 1055
AsiGI ACCGGT 1 cut(s) 2057
Asp700I GAANNNNTTC 1 cut(s) 269
AspLEI GCGC 4 cut(s) 179, 930, 1057, 1059
AspS9I GGNCC 2 cut(s) 1146, 1833
AsuC2I CCSGG 1 cut(s) 1438
AsuHPI GGTGA 5 cut(s) 868, 1453, 1532, 1616, 2047
AvaI CYCGRG 2 cut(s) 55, 1152
AvaII GGWCC 2 cut(s) 1146, 1833
BaeI ACNNNNGTAYC 2 cut(s) 342, 375
BbsI GAAGAC 3 cut(s) 72, 1238, 1637
Bbv12I GWGCWC 1 cut(s) 77
BccI CCATC 8 cut(s) 154, 290, 674, 706, 1438, 1595, 1889, 2060
BceAI ACGGC 2 cut(s) 44, 746
BcgI CGANNNNNNTGC 2 cut(s) 920, 954
BclI TGATCA 2 cut(s) 1522, 2005
BcnI CCSGG 1 cut(s) 1438
BcoDI GTCTC 2 cut(s) 316, 1149
BfaI CTAG 2 cut(s) 189, 786
BfmI CTRYAG 6 cut(s) 621, 809, 993, 1208, 1291, 1811
BfuAI ACCTGC 2 cut(s) 816, 2041
Bme1390I CCNGG 1 cut(s) 1438
Bme18I GGWCC 2 cut(s) 1146, 1833
BmeT110I CYCGRG 2 cut(s) 55, 1152
BmgT120I GGNCC 2 cut(s) 1146, 1833
BmiI GGNNCC 7 cut(s) 13, 32, 1000, 1111, 1147, 1253, 1648
BmrFI CCNGG 1 cut(s) 1438
BmrI ACTGGG 1 cut(s) 481
BmsI GCATC 8 cut(s) 202, 215, 899, 1261, 1336, 1380, 1408, 1783
BmuI ACTGGG 1 cut(s) 481
BpiI GAAGAC 3 cut(s) 72, 1238, 1637
BpmI CTGGAG 1 cut(s) 360
Bpu10I CCTNAGC 1 cut(s) 1803
BpuEI CTTGAG 1 cut(s) 1349
BpuMI CCSGG 1 cut(s) 1438
BsaBI GATNNNNATC 3 cut(s) 451, 1448, 1913
BsaI GGTCTC 1 cut(s) 1149
BsaJI CCNNGG 5 cut(s) 26, 416, 1437, 1681, 1694
BsaWI WCCGGW 2 cut(s) 1302, 2057
BsaXI ACNNNNNCTCC 2 cut(s) 7, 37
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 1025, 1483
Bse118I RCCGGY 3 cut(s) 824, 1923, 2057
Bse1I ACTGG 6 cut(s) 50, 476, 565, 689, 1730, 1857
Bse3DI GCAATG 2 cut(s) 1057, 1803
Bse8I GATNNNNATC 3 cut(s) 451, 1448, 1913
BseDI CCNNGG 5 cut(s) 26, 416, 1437, 1681, 1694
BseGI GGATG 3 cut(s) 282, 481, 1606
BseJI GATNNNNATC 3 cut(s) 451, 1448, 1913
BseLI CCNNNNNNNGG 3 cut(s) 61, 1025, 1483
BseMI GCAATG 2 cut(s) 1057, 1803
BseMII CTCAG 3 cut(s) 311, 1254, 1794
BseNI ACTGG 6 cut(s) 50, 476, 565, 689, 1730, 1857
BsePI GCGCGC 1 cut(s) 1055
BseRI GAGGAG 3 cut(s) 24, 168, 683
BsgI GTGCAG 2 cut(s) 590, 1004
Bsh1236I CGCG 4 cut(s) 177, 930, 1057, 1710
BshFI GGCC 1 cut(s) 534
BshTI ACCGGT 1 cut(s) 2057
BsiHKAI GWGCWC 1 cut(s) 77
BsiHKCI CYCGRG 2 cut(s) 55, 1152
BsiSI CCGG 5 cut(s) 825, 1303, 1437, 1924, 2058
BslFI GGGAC 2 cut(s) 38, 1874
BslI CCNNNNNNNGG 3 cut(s) 61, 1025, 1483
BsmAI GTCTC 2 cut(s) 316, 1149
BsmFI GGGAC 2 cut(s) 38, 1874
BsmI GAATGC 1 cut(s) 943
BsnI GGCC 1 cut(s) 534
Bso31I GGTCTC 1 cut(s) 1149
BsoBI CYCGRG 2 cut(s) 55, 1152
Bsp1286I GDGCHC 1 cut(s) 77
Bsp1407I TGTACA 1 cut(s) 2016
Bsp143I GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
Bsp19I CCATGG 1 cut(s) 1694
Bsp68I TCGCGA 1 cut(s) 1710
BspACI CCGC 2 cut(s) 1203, 2043
BspANI GGCC 1 cut(s) 534
BspCNI CTCAG 3 cut(s) 312, 1255, 1795
BspFNI CGCG 4 cut(s) 177, 930, 1057, 1710
BspHI TCATGA 3 cut(s) 483, 1495, 1789
BspLI GGNNCC 7 cut(s) 13, 32, 1000, 1111, 1147, 1253, 1648
BspMAI CTGCAG 4 cut(s) 625, 813, 1212, 1815
BspMI ACCTGC 2 cut(s) 816, 2041
BspPI GGATC 3 cut(s) 442, 1253, 1494
BspTNI GGTCTC 1 cut(s) 1149
BsrBI CCGCTC 1 cut(s) 1203
BsrDI GCAATG 2 cut(s) 1057, 1803
BsrFI RCCGGY 3 cut(s) 824, 1923, 2057
BsrGI TGTACA 1 cut(s) 2016
BsrI ACTGG 6 cut(s) 50, 476, 565, 689, 1730, 1857
BssAI RCCGGY 3 cut(s) 824, 1923, 2057
BssECI CCNNGG 5 cut(s) 26, 416, 1437, 1681, 1694
BssHII GCGCGC 1 cut(s) 1055
BssMI GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
BssT1I CCWWGG 2 cut(s) 1681, 1694
Bst6I CTCTTC 3 cut(s) 226, 844, 1608
BstAUI TGTACA 1 cut(s) 2016
BstC8I GCNNGC 4 cut(s) 816, 1057, 1212, 1774
BstDEI CTNAG 4 cut(s) 320, 971, 1263, 1803
BstDSI CCRYGG 2 cut(s) 26, 1694
BstEII GGTNACC 1 cut(s) 1190
BstENI CCTNNNNNAGG 1 cut(s) 1023
BstF5I GGATG 3 cut(s) 282, 481, 1606
BstFNI CGCG 4 cut(s) 177, 930, 1057, 1710
BstHHI GCGC 4 cut(s) 179, 930, 1057, 1059
BstKTI GATC 7 cut(s) 437, 1248, 1335, 1489, 1525, 1911, 2008
BstMAI GTCTC 2 cut(s) 316, 1149
BstMBI GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
BstNSI RCATGY 1 cut(s) 1972
BstPI GGTNACC 1 cut(s) 1190
BstSCI CCNGG 1 cut(s) 1436
BstSFI CTRYAG 6 cut(s) 621, 809, 993, 1208, 1291, 1811
BstUI CGCG 4 cut(s) 177, 930, 1057, 1710
BstV2I GAAGAC 3 cut(s) 72, 1238, 1637
BsuRI GGCC 1 cut(s) 534
BtgI CCRYGG 2 cut(s) 26, 1694
BtgZI GCGATG 1 cut(s) 173
BtsCI GGATG 3 cut(s) 282, 481, 1606
BtsIMutI CAGTG 1 cut(s) 572
BtuMI TCGCGA 1 cut(s) 1710
BveI ACCTGC 2 cut(s) 816, 2041
Cac8I GCNNGC 4 cut(s) 816, 1057, 1212, 1774
CciI TCATGA 3 cut(s) 483, 1495, 1789
CfoI GCGC 4 cut(s) 179, 930, 1057, 1059
Cfr10I RCCGGY 3 cut(s) 824, 1923, 2057
Cfr13I GGNCC 2 cut(s) 1146, 1833
Csp6I GTAC 4 cut(s) 165, 236, 351, 2017
CspAI ACCGGT 1 cut(s) 2057
CviQI GTAC 4 cut(s) 165, 236, 351, 2017
DdeI CTNAG 4 cut(s) 320, 971, 1263, 1803
DpnI GATC 7 cut(s) 436, 1247, 1334, 1488, 1524, 1910, 2007
DpnII GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
DraIII CACNNNGTG 1 cut(s) 1554
Eam1104I CTCTTC 3 cut(s) 226, 844, 1608
EarI CTCTTC 3 cut(s) 226, 844, 1608
Eco130I CCWWGG 2 cut(s) 1681, 1694
Eco31I GGTCTC 1 cut(s) 1149
Eco32I GATATC 1 cut(s) 1378
Eco47I GGWCC 2 cut(s) 1146, 1833
Eco57I CTGAAG 1 cut(s) 606
Eco88I CYCGRG 2 cut(s) 55, 1152
Eco91I GGTNACC 1 cut(s) 1190
EcoNI CCTNNNNNAGG 1 cut(s) 1023
EcoO65I GGTNACC 1 cut(s) 1190
EcoRI GAATTC 1 cut(s) 1729
EcoRV GATATC 1 cut(s) 1378
EcoT14I CCWWGG 2 cut(s) 1681, 1694
EcoT22I ATGCAT 2 cut(s) 943, 1276
ErhI CCWWGG 2 cut(s) 1681, 1694
FalI AAGNNNNNCTT 2 cut(s) 669, 701
FaqI GGGAC 2 cut(s) 38, 1874
FauNDI CATATG 1 cut(s) 344
FbaI TGATCA 2 cut(s) 1522, 2005
FblI GTMKAC 3 cut(s) 103, 1041, 1944
FokI GGATG 3 cut(s) 269, 488, 1613
FspBI CTAG 2 cut(s) 189, 786
GlaI GCGC 4 cut(s) 178, 929, 1056, 1058
GsuI CTGGAG 1 cut(s) 360
HaeIII GGCC 1 cut(s) 534
HapII CCGG 5 cut(s) 825, 1303, 1437, 1924, 2058
HhaI GCGC 4 cut(s) 179, 930, 1057, 1059
Hin6I GCGC 4 cut(s) 177, 928, 1055, 1057
HinP1I GCGC 4 cut(s) 177, 928, 1055, 1057
HindIII AAGCTT 2 cut(s) 308, 1637
HinfI GANTC 7 cut(s) 141, 257, 440, 452, 571, 641, 1505
HpaII CCGG 5 cut(s) 825, 1303, 1437, 1924, 2058
HphI GGTGA 5 cut(s) 868, 1453, 1532, 1616, 2047
Hpy166II GTNNAC 7 cut(s) 104, 385, 1007, 1042, 1149, 1945, 2017
Hpy188I TCNGA 9 cut(s) 115, 262, 439, 576, 765, 908, 1025, 1735, 2010
Hpy8I GTNNAC 7 cut(s) 104, 385, 1007, 1042, 1149, 1945, 2017
HpyAV CCTTC 7 cut(s) 407, 1467, 1487, 1682, 1837, 1860, 1957
HpyF3I CTNAG 4 cut(s) 320, 971, 1263, 1803
HspAI GCGC 4 cut(s) 177, 928, 1055, 1057
Ksp22I TGATCA 2 cut(s) 1522, 2005
Kzo9I GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
LmnI GCTCC 7 cut(s) 11, 36, 155, 993, 1109, 1200, 1646
LweI GCATC 8 cut(s) 202, 215, 899, 1261, 1336, 1380, 1408, 1783
MaeI CTAG 2 cut(s) 189, 786
MaeIII GTNAC 4 cut(s) 631, 874, 1190, 1721
MalI GATC 7 cut(s) 436, 1247, 1334, 1488, 1524, 1910, 2007
MbiI CCGCTC 1 cut(s) 1203
MboI GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
MhlI GDGCHC 1 cut(s) 77
MlyI GAGTC 1 cut(s) 1514
MmeI TCCRAC 3 cut(s) 425, 743, 2048
Mph1103I ATGCAT 2 cut(s) 943, 1276
MroXI GAANNNNTTC 1 cut(s) 269
MseI TTAA 5 cut(s) 468, 750, 1431, 1586, 1931
MslI CAYNNNNRTG 3 cut(s) 1136, 1494, 1699
MspA1I CMGCKG 2 cut(s) 1091, 1315
MspI CCGG 5 cut(s) 825, 1303, 1437, 1924, 2058
MspR9I CCNGG 1 cut(s) 1438
Mva1269I GAATGC 1 cut(s) 943
MvnI CGCG 4 cut(s) 177, 930, 1057, 1710
NciI CCSGG 1 cut(s) 1438
NcoI CCATGG 1 cut(s) 1694
NdeI CATATG 1 cut(s) 344
NdeII GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
NlaIV GGNNCC 7 cut(s) 13, 32, 1000, 1111, 1147, 1253, 1648
NmeAIII GCCGAG 2 cut(s) 1085, 1900
NmuCI GTSAC 1 cut(s) 874
NruI TCGCGA 1 cut(s) 1710
NsiI ATGCAT 2 cut(s) 943, 1276
NspI RCATGY 1 cut(s) 1972
PaeR7I CTCGAG 1 cut(s) 1152
PagI TCATGA 3 cut(s) 483, 1495, 1789
PaqCI CACCTGC 2 cut(s) 816, 2041
PauI GCGCGC 1 cut(s) 1055
PctI GAATGC 1 cut(s) 943
PdmI GAANNNNTTC 1 cut(s) 269
PfeI GAWTC 6 cut(s) 141, 257, 440, 452, 571, 641
PinAI ACCGGT 1 cut(s) 2057
PleI GAGTC 1 cut(s) 1513
PpsI GAGTC 1 cut(s) 1513
PspEI GGTNACC 1 cut(s) 1190
PspN4I GGNNCC 7 cut(s) 13, 32, 1000, 1111, 1147, 1253, 1648
PspPI GGNCC 2 cut(s) 1146, 1833
PstI CTGCAG 4 cut(s) 625, 813, 1212, 1815
PteI GCGCGC 1 cut(s) 1055
PvuII CAGCTG 2 cut(s) 1091, 1315
RruI TCGCGA 1 cut(s) 1710
RsaI GTAC 4 cut(s) 166, 237, 352, 2018
RsaNI GTAC 4 cut(s) 165, 236, 351, 2017
RseI CAYNNNNRTG 3 cut(s) 1136, 1494, 1699
SaqAI TTAA 5 cut(s) 468, 750, 1431, 1586, 1931
Sau3AI GATC 7 cut(s) 434, 1245, 1332, 1486, 1522, 1908, 2005
Sau96I GGNCC 2 cut(s) 1146, 1833
SchI GAGTC 1 cut(s) 1514
ScrFI CCNGG 1 cut(s) 1438
SduI GDGCHC 1 cut(s) 77
SfaNI GCATC 8 cut(s) 202, 215, 899, 1261, 1336, 1380, 1408, 1783
SfcI CTRYAG 6 cut(s) 621, 809, 993, 1208, 1291, 1811
Sfr274I CTCGAG 1 cut(s) 1152
SinI GGWCC 2 cut(s) 1146, 1833
SlaI CTCGAG 1 cut(s) 1152
SmiMI CAYNNNNRTG 3 cut(s) 1136, 1494, 1699
SmlI CTYRAG 2 cut(s) 1152, 1364
SmoI CTYRAG 2 cut(s) 1152, 1364
SsiI CCGC 2 cut(s) 1203, 2043
SspMI CTAG 2 cut(s) 189, 786
StyD4I CCNGG 1 cut(s) 1436
StyI CCWWGG 2 cut(s) 1681, 1694
TaqI TCGA 4 cut(s) 445, 1153, 1388, 1452
TatI WGTACW 2 cut(s) 235, 2016
TfiI GAWTC 6 cut(s) 141, 257, 440, 452, 571, 641
Tru1I TTAA 5 cut(s) 468, 750, 1431, 1586, 1931
Tru9I TTAA 5 cut(s) 468, 750, 1431, 1586, 1931
TscAI CASTG 1 cut(s) 572
TseFI GTSAC 1 cut(s) 874
Tsp45I GTSAC 1 cut(s) 874
TspGWI ACGGA 1 cut(s) 35
TspRI CASTG 1 cut(s) 572
VpaK11BI GGWCC 2 cut(s) 1146, 1833
XagI CCTNNNNNAGG 1 cut(s) 1023
XapI RAATTY 5 cut(s) 457, 1398, 1542, 1579, 1729
XbaI TCTAGA 1 cut(s) 785
XceI RCATGY 1 cut(s) 1972
XhoI CTCGAG 1 cut(s) 1152
XmiI GTMKAC 3 cut(s) 103, 1041, 1944
XmnI GAANNNNTTC 1 cut(s) 269
XspI CTAG 2 cut(s) 189, 786
Zsp2I ATGCAT 2 cut(s) 943, 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.