Rh2AG284500

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
34688839 .. 34692851
4013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG284500.1

Sequence Viewer

Length: 1584 bp
ATGAAAGTTTTGGGGAGGCTGACTGACAGGAGTGAATATCAAGGAATTGGCCTACTAAACTTCAACACAAGCGAAATCAACCAGTGGAATCAGATTGTTCCTGAAGCTGCCAATGTTGTTCTGCACTTGGACTATGCTGCAGAGAATGTAACTTGGGAATCTTTATATCCAGAATGGATAGATGAGGAGGAAGAAGATGGACTTCCAGTTTGCCCATCTCTGCCAAAGCTCAAAGCACTTGGCAGACGGCTTGACCTCATAGCTGTTAAACTTCCTTGTCGGAAAGAGCTACCGAATTGGTCTAGAGATGTTGCTCGGTTGCACCTGCAGCTTGCTGCTGCCGGTGTTGCTGCCTCTTCCAAAGGGTATCGCCATGTGCATTTGCTTTTCGTCACCGACTGCTTCCCTATTCCAAATCTGTTCAGATGCAAAGAGCTTGTGGTGCGCGAGGGGAATGCATGGTTATACGAGCCAAACCTCAATGTGCTTAGAGAAAAAGTGCAGCTCCCTGTAGGTTCCTGTGAACTTGCACTTCCTTTCAGAGGCAAAGGGCTGGTCTACTCTGGCAATGCGCGCCGAGAAGCGTATGCAACAATTCTCCATTCAGCTGATGTTTATGTTTGTGGAGCCATAGCTGCTGCACAAAGCATTCGAATGGCAGGGTCCACTCGAGACCTTGTGATACTTGTTGATGAAACCATTAGTGGTTACCATAGGAGCGGACTGCAGGCAGCAGGGTGGATAGTAAAGACAATAGAAAGGATCAGGAACCCGAAAGCTGAGAAAGATGCATACAATGAATGGAACTACAGCAAGTTCCGGTTGTGGCAGCTGACAGAATATGACAAGATCATTTTCATTGATGCTGATTTGCTTATACTCAAGAACATTGATATCTTATTCTCGATGCCAGAAATTTCTGCAACAGGGAATGATGCCACACTTTTTAACTCCGGGGTGATGGTTATCGAGCCTTCAAATTGCACATTCCACCTTCTTATGGATCACATTCATGAGATAGAGTCCTACAATGGTGGTGATCAGGGCTACTTGAATGAAATTTTCACATGGTGGCATAGAATACCCAGACACATGAATTTCTTAAAGCATTTTTGGGATGGTGATGAGGAAGAGATGAAACAGAAGAAGACCAGGCTTTTTGGAGCCAATCCTCCAATTCTTTATGTCCTTCACTACCTAGGAGTGAAGCCATGGTTGTGCTTTCGCGACTACGATTGTAACTGGAATTCTGATATATTTCAAGAGTTTGCAAGTGATGTTGCTCACGCAAGCTGGTGGAGAGTTCATGATGCAATGCCTGAGCTGCTGCAGCAGTTTTGTTTTTTGAGGACCAAGCAGAAGGCACAACTGGAATGGGACAGAAGGGAAGCCGAGAAAGCTAACTTCACAGATGGACATTGGAAGATCAAAATCAATGACCGGCGATTAAAAAGATGTGTAGACAATGTGTGTTCTTGGAAGGGCATGTTGAAGCATTGGGGAGAAACAAATTGGACTGATGATCAGATTGTGTACAATCCAACTCCACCTGCAATTACCGCAACTTCCATCACCGGTTTATGA

Protein Analysis

527

Amino Acids

60.77

Weight (kDa)

6.12

Isoelectric Point (pI)

39.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 200 - 406 3.4e-13 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014065)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 333, 1558
Acc36I ACCTGC 2 cut(s) 333, 1558
AccBSI CCGCTC 1 cut(s) 720
AccI GTMKAC 2 cut(s) 558, 1461
AccII CGCG 3 cut(s) 447, 574, 1227
AciI CCGC 2 cut(s) 720, 1560
AclWI GGATC 2 cut(s) 770, 1011
AcsI RAATTY 4 cut(s) 915, 1059, 1096, 1246
AcuI CTGAAG 1 cut(s) 123
AdeI CACNNNGTG 1 cut(s) 1071
AfaI GTAC 1 cut(s) 1535
AfiI CCNNNNNNNGG 2 cut(s) 542, 1000
AgeI ACCGGT 1 cut(s) 1574
AgsI TTSAA 5 cut(s) 64, 978, 1054, 1262, 1492
AjnI CCWGG 1 cut(s) 1151
Alw26I GTCTC 1 cut(s) 666
AlwI GGATC 2 cut(s) 770, 1011
Ama87I CYCGRG 1 cut(s) 669
AoxI GGCC 1 cut(s) 49
ApoI RAATTY 4 cut(s) 915, 1059, 1096, 1246
ArsI GACNNNNNNTTYG 4 cut(s) 192, 224, 540, 572
AsiGI ACCGGT 1 cut(s) 1574
AspA2I CCTAGG 1 cut(s) 1198
AspLEI GCGC 3 cut(s) 447, 574, 576
AspS9I GGNCC 2 cut(s) 663, 1350
AsuC2I CCSGG 1 cut(s) 955
AsuHPI GGTGA 5 cut(s) 385, 970, 1049, 1133, 1564
AsuII TTCGAA 1 cut(s) 652
AvaI CYCGRG 1 cut(s) 669
AvaII GGWCC 2 cut(s) 663, 1350
AvrII CCTAGG 1 cut(s) 1198
BbsI GAAGAC 1 cut(s) 1154
BccI CCATC 6 cut(s) 191, 223, 955, 1112, 1406, 1577
BceAI ACGGC 1 cut(s) 263
BcgI CGANNNNNNTGC 2 cut(s) 437, 471
BciT130I CCWGG 1 cut(s) 1153
BclI TGATCA 2 cut(s) 1039, 1522
BcnI CCSGG 1 cut(s) 955
BcoDI GTCTC 1 cut(s) 666
BfaI CTAG 2 cut(s) 303, 1199
BfmI CTRYAG 6 cut(s) 138, 326, 510, 725, 808, 1328
BfuAI ACCTGC 2 cut(s) 333, 1558
BlnI CCTAGG 1 cut(s) 1198
Bme1390I CCNGG 2 cut(s) 955, 1153
Bme18I GGWCC 2 cut(s) 663, 1350
BmeT110I CYCGRG 1 cut(s) 669
BmgT120I GGNCC 2 cut(s) 663, 1350
BmiI GGNNCC 5 cut(s) 517, 628, 664, 770, 1165
BmrFI CCNGG 2 cut(s) 955, 1153
BmsI GCATC 6 cut(s) 416, 778, 853, 897, 925, 1300
BpiI GAAGAC 1 cut(s) 1154
Bpu10I CCTNAGC 1 cut(s) 1320
Bpu14I TTCGAA 1 cut(s) 652
BpuEI CTTGAG 1 cut(s) 866
BpuMI CCSGG 1 cut(s) 955
BsaBI GATNNNNATC 2 cut(s) 965, 1430
BsaI GGTCTC 1 cut(s) 666
BsaJI CCNNGG 3 cut(s) 954, 1198, 1211
BsaWI WCCGGW 2 cut(s) 819, 1574
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 1000
Bse118I RCCGGY 3 cut(s) 341, 1440, 1574
Bse1I ACTGG 4 cut(s) 82, 206, 1247, 1374
Bse3DI GCAATG 2 cut(s) 574, 1320
Bse8I GATNNNNATC 2 cut(s) 965, 1430
BseBI CCWGG 1 cut(s) 1153
BseDI CCNNGG 3 cut(s) 954, 1198, 1211
BseGI GGATG 1 cut(s) 1123
BseJI GATNNNNATC 2 cut(s) 965, 1430
BseLI CCNNNNNNNGG 2 cut(s) 542, 1000
BseMI GCAATG 2 cut(s) 574, 1320
BseMII CTCAG 2 cut(s) 771, 1311
BseNI ACTGG 4 cut(s) 82, 206, 1247, 1374
BsePI GCGCGC 1 cut(s) 572
BseRI GAGGAG 1 cut(s) 200
BsgI GTGCAG 3 cut(s) 107, 521, 624
Bsh1236I CGCG 3 cut(s) 447, 574, 1227
BshFI GGCC 1 cut(s) 51
BshTI ACCGGT 1 cut(s) 1574
BsiHKCI CYCGRG 1 cut(s) 669
BsiSI CCGG 5 cut(s) 342, 820, 954, 1441, 1575
BslFI GGGAC 1 cut(s) 1391
BslI CCNNNNNNNGG 2 cut(s) 542, 1000
BsmAI GTCTC 1 cut(s) 666
BsmFI GGGAC 1 cut(s) 1391
BsmI GAATGC 2 cut(s) 460, 648
BsnI GGCC 1 cut(s) 51
Bso31I GGTCTC 1 cut(s) 666
BsoBI CYCGRG 1 cut(s) 669
Bsp119I TTCGAA 1 cut(s) 652
Bsp1407I TGTACA 1 cut(s) 1533
Bsp143I GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
Bsp19I CCATGG 1 cut(s) 1211
Bsp68I TCGCGA 1 cut(s) 1227
BspACI CCGC 2 cut(s) 720, 1560
BspANI GGCC 1 cut(s) 51
BspCNI CTCAG 2 cut(s) 772, 1312
BspFNI CGCG 3 cut(s) 447, 574, 1227
BspHI TCATGA 2 cut(s) 1012, 1306
BspLI GGNNCC 5 cut(s) 517, 628, 664, 770, 1165
BspMAI CTGCAG 4 cut(s) 142, 330, 729, 1332
BspMI ACCTGC 2 cut(s) 333, 1558
BspPI GGATC 2 cut(s) 770, 1011
BspT104I TTCGAA 1 cut(s) 652
BspTNI GGTCTC 1 cut(s) 666
BsrBI CCGCTC 1 cut(s) 720
BsrDI GCAATG 2 cut(s) 574, 1320
BsrFI RCCGGY 3 cut(s) 341, 1440, 1574
BsrGI TGTACA 1 cut(s) 1533
BsrI ACTGG 4 cut(s) 82, 206, 1247, 1374
BssAI RCCGGY 3 cut(s) 341, 1440, 1574
BssECI CCNNGG 3 cut(s) 954, 1198, 1211
BssHII GCGCGC 1 cut(s) 572
BssMI GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
BssT1I CCWWGG 2 cut(s) 1198, 1211
Bst2UI CCWGG 1 cut(s) 1153
Bst6I CTCTTC 2 cut(s) 361, 1125
BstAUI TGTACA 1 cut(s) 1533
BstBI TTCGAA 1 cut(s) 652
BstC8I GCNNGC 4 cut(s) 333, 574, 729, 1291
BstDEI CTNAG 3 cut(s) 488, 780, 1320
BstDSI CCRYGG 1 cut(s) 1211
BstEII GGTNACC 1 cut(s) 707
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 1 cut(s) 1123
BstFNI CGCG 3 cut(s) 447, 574, 1227
BstHHI GCGC 3 cut(s) 447, 574, 576
BstKTI GATC 6 cut(s) 765, 852, 1006, 1042, 1428, 1525
BstMAI GTCTC 1 cut(s) 666
BstMBI GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
BstMWI GCNNNNNNNGC 9 cut(s) 328, 347, 442, 573, 635, 1324, 1330, 1397, 1559
BstNI CCWGG 1 cut(s) 1153
BstNSI RCATGY 1 cut(s) 1489
BstPI GGTNACC 1 cut(s) 707
BstSCI CCNGG 2 cut(s) 953, 1151
BstSFI CTRYAG 6 cut(s) 138, 326, 510, 725, 808, 1328
BstUI CGCG 3 cut(s) 447, 574, 1227
BstV2I GAAGAC 1 cut(s) 1154
BsuRI GGCC 1 cut(s) 51
BtgI CCRYGG 1 cut(s) 1211
BtsCI GGATG 1 cut(s) 1123
BtsIMutI CAGTG 1 cut(s) 89
BtuMI TCGCGA 1 cut(s) 1227
BveI ACCTGC 2 cut(s) 333, 1558
Cac8I GCNNGC 4 cut(s) 333, 574, 729, 1291
CciI TCATGA 2 cut(s) 1012, 1306
CfoI GCGC 3 cut(s) 447, 574, 576
Cfr10I RCCGGY 3 cut(s) 341, 1440, 1574
Cfr13I GGNCC 2 cut(s) 663, 1350
Csp6I GTAC 1 cut(s) 1534
CspAI ACCGGT 1 cut(s) 1574
CviAII CATG 8 cut(s) 374, 459, 1013, 1068, 1093, 1212, 1307, 1486
CviQI GTAC 1 cut(s) 1534
DdeI CTNAG 3 cut(s) 488, 780, 1320
DpnI GATC 6 cut(s) 764, 851, 1005, 1041, 1427, 1524
DpnII GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
DraIII CACNNNGTG 1 cut(s) 1071
Eam1104I CTCTTC 2 cut(s) 361, 1125
EarI CTCTTC 2 cut(s) 361, 1125
Eco130I CCWWGG 2 cut(s) 1198, 1211
Eco31I GGTCTC 1 cut(s) 666
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 2 cut(s) 663, 1350
Eco57I CTGAAG 1 cut(s) 123
Eco88I CYCGRG 1 cut(s) 669
Eco91I GGTNACC 1 cut(s) 707
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoO65I GGTNACC 1 cut(s) 707
EcoRI GAATTC 1 cut(s) 1246
EcoRII CCWGG 1 cut(s) 1151
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 2 cut(s) 1198, 1211
EcoT22I ATGCAT 2 cut(s) 460, 793
ErhI CCWWGG 2 cut(s) 1198, 1211
FaeI CATG 8 cut(s) 377, 462, 1016, 1071, 1096, 1215, 1310, 1489
FalI AAGNNNNNCTT 2 cut(s) 186, 218
FaqI GGGAC 1 cut(s) 1391
FatI CATG 8 cut(s) 373, 458, 1012, 1067, 1092, 1211, 1306, 1485
FbaI TGATCA 2 cut(s) 1039, 1522
FblI GTMKAC 2 cut(s) 558, 1461
FokI GGATG 1 cut(s) 1130
FspBI CTAG 2 cut(s) 303, 1199
GlaI GCGC 3 cut(s) 446, 573, 575
HaeIII GGCC 1 cut(s) 51
HapII CCGG 5 cut(s) 342, 820, 954, 1441, 1575
HhaI GCGC 3 cut(s) 447, 574, 576
Hin1II CATG 8 cut(s) 377, 462, 1016, 1071, 1096, 1215, 1310, 1489
Hin6I GCGC 3 cut(s) 445, 572, 574
HinP1I GCGC 3 cut(s) 445, 572, 574
HinfI GANTC 3 cut(s) 88, 158, 1022
HpaII CCGG 5 cut(s) 342, 820, 954, 1441, 1575
HphI GGTGA 5 cut(s) 385, 970, 1049, 1133, 1564
Hpy166II GTNNAC 5 cut(s) 524, 559, 666, 1462, 1534
Hpy188I TCNGA 6 cut(s) 93, 282, 425, 542, 1252, 1527
Hpy8I GTNNAC 5 cut(s) 524, 559, 666, 1462, 1534
HpyAV CCTTC 6 cut(s) 984, 1004, 1199, 1354, 1377, 1474
HpyF10VI GCNNNNNNNGC 9 cut(s) 328, 347, 442, 573, 635, 1324, 1330, 1397, 1559
HpyF3I CTNAG 3 cut(s) 488, 780, 1320
Hsp92II CATG 8 cut(s) 377, 462, 1016, 1071, 1096, 1215, 1310, 1489
HspAI GCGC 3 cut(s) 445, 572, 574
Ksp22I TGATCA 2 cut(s) 1039, 1522
Kzo9I GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
LmnI GCTCC 4 cut(s) 510, 626, 717, 1163
LweI GCATC 6 cut(s) 416, 778, 853, 897, 925, 1300
MaeI CTAG 2 cut(s) 303, 1199
MaeIII GTNAC 4 cut(s) 148, 391, 707, 1238
MalI GATC 6 cut(s) 764, 851, 1005, 1041, 1427, 1524
MbiI CCGCTC 1 cut(s) 720
MboI GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
MboII GAAGA 7 cut(s) 203, 206, 348, 1142, 1156, 1159, 1435
MlyI GAGTC 1 cut(s) 1031
MmeI TCCRAC 2 cut(s) 260, 1565
Mph1103I ATGCAT 2 cut(s) 460, 793
MseI TTAA 4 cut(s) 267, 948, 1103, 1448
MslI CAYNNNNRTG 3 cut(s) 653, 1011, 1216
MspA1I CMGCKG 2 cut(s) 608, 832
MspI CCGG 5 cut(s) 342, 820, 954, 1441, 1575
MspR9I CCNGG 2 cut(s) 955, 1153
Mva1269I GAATGC 2 cut(s) 460, 648
MvaI CCWGG 1 cut(s) 1153
MvnI CGCG 3 cut(s) 447, 574, 1227
MwoI GCNNNNNNNGC 9 cut(s) 328, 347, 442, 573, 635, 1324, 1330, 1397, 1559
NciI CCSGG 1 cut(s) 955
NcoI CCATGG 1 cut(s) 1211
NdeII GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
NlaIII CATG 8 cut(s) 377, 462, 1016, 1071, 1096, 1215, 1310, 1489
NlaIV GGNNCC 5 cut(s) 517, 628, 664, 770, 1165
NmeAIII GCCGAG 2 cut(s) 602, 1417
NmuCI GTSAC 1 cut(s) 391
NruI TCGCGA 1 cut(s) 1227
NsiI ATGCAT 2 cut(s) 460, 793
NspI RCATGY 1 cut(s) 1489
NspV TTCGAA 1 cut(s) 652
PaeR7I CTCGAG 1 cut(s) 669
PagI TCATGA 2 cut(s) 1012, 1306
PaqCI CACCTGC 2 cut(s) 333, 1558
PauI GCGCGC 1 cut(s) 572
PctI GAATGC 2 cut(s) 460, 648
PfeI GAWTC 2 cut(s) 88, 158
PinAI ACCGGT 1 cut(s) 1574
PleI GAGTC 1 cut(s) 1030
PpsI GAGTC 1 cut(s) 1030
Psp6I CCWGG 1 cut(s) 1151
PspEI GGTNACC 1 cut(s) 707
PspGI CCWGG 1 cut(s) 1151
PspN4I GGNNCC 5 cut(s) 517, 628, 664, 770, 1165
PspPI GGNCC 2 cut(s) 663, 1350
PstI CTGCAG 4 cut(s) 142, 330, 729, 1332
PteI GCGCGC 1 cut(s) 572
PvuII CAGCTG 2 cut(s) 608, 832
RruI TCGCGA 1 cut(s) 1227
RsaI GTAC 1 cut(s) 1535
RsaNI GTAC 1 cut(s) 1534
RseI CAYNNNNRTG 3 cut(s) 653, 1011, 1216
SaqAI TTAA 4 cut(s) 267, 948, 1103, 1448
Sau3AI GATC 6 cut(s) 762, 849, 1003, 1039, 1425, 1522
Sau96I GGNCC 2 cut(s) 663, 1350
SchI GAGTC 1 cut(s) 1031
ScrFI CCNGG 2 cut(s) 955, 1153
SfaNI GCATC 6 cut(s) 416, 778, 853, 897, 925, 1300
SfcI CTRYAG 6 cut(s) 138, 326, 510, 725, 808, 1328
Sfr274I CTCGAG 1 cut(s) 669
SfuI TTCGAA 1 cut(s) 652
SinI GGWCC 2 cut(s) 663, 1350
SlaI CTCGAG 1 cut(s) 669
SmiMI CAYNNNNRTG 3 cut(s) 653, 1011, 1216
SmlI CTYRAG 2 cut(s) 669, 881
SmoI CTYRAG 2 cut(s) 669, 881
SsiI CCGC 2 cut(s) 720, 1560
SspMI CTAG 2 cut(s) 303, 1199
StyD4I CCNGG 2 cut(s) 953, 1151
StyI CCWWGG 2 cut(s) 1198, 1211
TaqI TCGA 4 cut(s) 652, 670, 905, 969
TatI WGTACW 1 cut(s) 1533
TfiI GAWTC 2 cut(s) 88, 158
Tru1I TTAA 4 cut(s) 267, 948, 1103, 1448
Tru9I TTAA 4 cut(s) 267, 948, 1103, 1448
TscAI CASTG 1 cut(s) 89
TseFI GTSAC 1 cut(s) 391
Tsp45I GTSAC 1 cut(s) 391
TspDTI ATGAA 9 cut(s) 17, 708, 813, 847, 1001, 1071, 1109, 1151, 1295
TspRI CASTG 1 cut(s) 89
VpaK11BI GGWCC 2 cut(s) 663, 1350
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 4 cut(s) 915, 1059, 1096, 1246
XbaI TCTAGA 1 cut(s) 302
XceI RCATGY 1 cut(s) 1489
XhoI CTCGAG 1 cut(s) 669
XmaJI CCTAGG 1 cut(s) 1198
XmiI GTMKAC 2 cut(s) 558, 1461
XspI CTAG 2 cut(s) 303, 1199
Zsp2I ATGCAT 2 cut(s) 460, 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.