Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0437811 RchiOBHm_Chr7g0218241 |
| rosa_laevigata | RLG00000002387 RLG00000009748 RLG00000015083 |
| rosa_multiflora | Rmu_sc0002510.1_g000030 Rmu_sc0004956.1_g000002 Rmu_sc0035370.1_g000002 Rmu_sc0041118.1_g000001 |
| rosa_rugosa | Rorug01G0424000 |
| rosa_samantha | Rh7DG304200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 170 |
| AatII | GACGTC | 1 cut(s) | 168 |
| AccI | GTMKAC | 1 cut(s) | 186 |
| AciI | CCGC | 3 cut(s) | 143, 232, 235 |
| AcyI | GRCGYC | 1 cut(s) | 165 |
| AgsI | TTSAA | 1 cut(s) | 270 |
| AjnI | CCWGG | 1 cut(s) | 174 |
| AluBI | AGCT | 3 cut(s) | 74, 212, 243 |
| AluI | AGCT | 3 cut(s) | 74, 212, 243 |
| ApeKI | GCWGC | 1 cut(s) | 243 |
| AsuHPI | GGTGA | 1 cut(s) | 71 |
| BbvI | GCAGC | 1 cut(s) | 230 |
| BceAI | ACGGC | 1 cut(s) | 205 |
| BciT130I | CCWGG | 1 cut(s) | 176 |
| BisI | GCNGC | 2 cut(s) | 233, 244 |
| BlsI | GCNGC | 2 cut(s) | 234, 245 |
| Bme1390I | CCNGG | 1 cut(s) | 176 |
| BmrFI | CCNGG | 1 cut(s) | 176 |
| BmsI | GCATC | 2 cut(s) | 84, 108 |
| BsaHI | GRCGYC | 1 cut(s) | 165 |
| Bse1I | ACTGG | 1 cut(s) | 160 |
| BseBI | CCWGG | 1 cut(s) | 176 |
| BseGI | GGATG | 2 cut(s) | 19, 99 |
| BseNI | ACTGG | 1 cut(s) | 160 |
| BseXI | GCAGC | 1 cut(s) | 230 |
| BsgI | GTGCAG | 2 cut(s) | 224, 229 |
| BspACI | CCGC | 3 cut(s) | 143, 232, 235 |
| BspQI | GCTCTTC | 1 cut(s) | 233 |
| BsrI | ACTGG | 1 cut(s) | 160 |
| BssNI | GRCGYC | 1 cut(s) | 165 |
| Bst2UI | CCWGG | 1 cut(s) | 176 |
| Bst6I | CTCTTC | 2 cut(s) | 47, 233 |
| BstACI | GRCGYC | 1 cut(s) | 165 |
| BstF5I | GGATG | 2 cut(s) | 19, 99 |
| BstNI | CCWGG | 1 cut(s) | 176 |
| BstSCI | CCNGG | 1 cut(s) | 174 |
| BstV1I | GCAGC | 1 cut(s) | 230 |
| BtsCI | GGATG | 2 cut(s) | 19, 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 153 |
| CviAII | CATG | 1 cut(s) | 22 |
| CviJI | RGCY | 4 cut(s) | 74, 179, 212, 243 |
| CviKI_1 | RGCY | 4 cut(s) | 74, 179, 212, 243 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 170 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 170 |
| Eam1104I | CTCTTC | 2 cut(s) | 47, 233 |
| EarI | CTCTTC | 2 cut(s) | 47, 233 |
| EciI | GGCGGA | 1 cut(s) | 250 |
| EcoRII | CCWGG | 1 cut(s) | 174 |
| FaeI | CATG | 1 cut(s) | 25 |
| FaiI | YATR | 5 cut(s) | 23, 32, 65, 78, 135 |
| FatI | CATG | 1 cut(s) | 21 |
| FblI | GTMKAC | 1 cut(s) | 186 |
| Fnu4HI | GCNGC | 2 cut(s) | 233, 244 |
| FokI | GGATG | 2 cut(s) | 26, 106 |
| Fsp4HI | GCNGC | 2 cut(s) | 233, 244 |
| GluI | GCNGC | 2 cut(s) | 233, 244 |
| Hin1I | GRCGYC | 1 cut(s) | 165 |
| Hin1II | CATG | 1 cut(s) | 25 |
| HincII | GTYRAC | 1 cut(s) | 187 |
| HindII | GTYRAC | 1 cut(s) | 187 |
| HindIII | AAGCTT | 1 cut(s) | 72 |
| HinfI | GANTC | 2 cut(s) | 40, 159 |
| HphI | GGTGA | 1 cut(s) | 71 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| Hpy99I | CGWCG | 5 cut(s) | 152, 167, 170, 188, 191 |
| HpyAV | CCTTC | 1 cut(s) | 215 |
| HpyCH4IV | ACGT | 1 cut(s) | 165 |
| HpyCH4V | TGCA | 3 cut(s) | 7, 205, 246 |
| HpySE526I | ACGT | 1 cut(s) | 165 |
| Hsp92I | GRCGYC | 1 cut(s) | 165 |
| Hsp92II | CATG | 1 cut(s) | 25 |
| LguI | GCTCTTC | 1 cut(s) | 233 |
| LpnPI | CCDG | 4 cut(s) | 111, 141, 161, 188 |
| Lsp1109I | GCAGC | 1 cut(s) | 230 |
| LweI | GCATC | 2 cut(s) | 84, 108 |
| MaeII | ACGT | 1 cut(s) | 165 |
| MboII | GAAGA | 2 cut(s) | 64, 250 |
| MluCI | AATT | 2 cut(s) | 225, 271 |
| MlyI | GAGTC | 1 cut(s) | 34 |
| MnlI | CCTC | 3 cut(s) | 3, 50, 61 |
| MspR9I | CCNGG | 1 cut(s) | 176 |
| MvaI | CCWGG | 1 cut(s) | 176 |
| NlaIII | CATG | 1 cut(s) | 25 |
| PciSI | GCTCTTC | 1 cut(s) | 233 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 189 |
| PfeI | GAWTC | 1 cut(s) | 159 |
| PkrI | GCNGC | 2 cut(s) | 234, 245 |
| PleI | GAGTC | 1 cut(s) | 34 |
| PpsI | GAGTC | 1 cut(s) | 34 |
| Psp6I | CCWGG | 1 cut(s) | 174 |
| PspGI | CCWGG | 1 cut(s) | 174 |
| SalI | GTCGAC | 1 cut(s) | 185 |
| SapI | GCTCTTC | 1 cut(s) | 233 |
| SatI | GCNGC | 2 cut(s) | 233, 244 |
| SchI | GAGTC | 1 cut(s) | 34 |
| ScrFI | CCNGG | 1 cut(s) | 176 |
| SetI | ASST | 5 cut(s) | 61, 76, 168, 214, 245 |
| SfaNI | GCATC | 2 cut(s) | 84, 108 |
| SgeI | CNNG | 7 cut(s) | 34, 102, 110, 134, 168, 187, 188 |
| SgrDI | CGTCGACG | 1 cut(s) | 185 |
| Sse9I | AATT | 2 cut(s) | 225, 271 |
| SsiI | CCGC | 3 cut(s) | 143, 232, 235 |
| StyD4I | CCNGG | 1 cut(s) | 174 |
| TaiI | ACGT | 1 cut(s) | 168 |
| TaqI | TCGA | 3 cut(s) | 162, 186, 216 |
| TasI | AATT | 2 cut(s) | 225, 271 |
| TauI | GCSGC | 1 cut(s) | 235 |
| TfiI | GAWTC | 1 cut(s) | 159 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TseI | GCWGC | 1 cut(s) | 243 |
| TspDTI | ATGAA | 2 cut(s) | 65, 234 |
| TspRI | CASTG | 1 cut(s) | 160 |
| XmiI | GTMKAC | 1 cut(s) | 186 |
| ZraI | GACGTC | 1 cut(s) | 166 |