Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0437811 RchiOBHm_Chr7g0218241 |
| rosa_laevigata | RLG00000002387 RLG00000009748 RLG00000015083 |
| rosa_multiflora | Rmu_sc0002510.1_g000030 Rmu_sc0004956.1_g000002 Rmu_sc0035370.1_g000002 Rmu_sc0041118.1_g000001 |
| rosa_rugosa | Rorug01G0424000 |
| rosa_samantha | Rh7DG304200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 29 |
| AcsI | RAATTY | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 144 |
| AgsI | TTSAA | 1 cut(s) | 133 |
| AluBI | AGCT | 1 cut(s) | 245 |
| AluI | AGCT | 1 cut(s) | 245 |
| AoxI | GGCC | 1 cut(s) | 135 |
| ApoI | RAATTY | 1 cut(s) | 15 |
| AsuHPI | GGTGA | 1 cut(s) | 242 |
| BccI | CCATC | 1 cut(s) | 16 |
| BfaI | CTAG | 1 cut(s) | 84 |
| BmsI | GCATC | 4 cut(s) | 70, 139, 150, 255 |
| BsaJI | CCNNGG | 1 cut(s) | 141 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseDI | CCNNGG | 1 cut(s) | 141 |
| BseGI | GGATG | 4 cut(s) | 104, 154, 190, 270 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseYI | CCCAGC | 1 cut(s) | 94 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BslFI | GGGAC | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BsmFI | GGGAC | 1 cut(s) | 48 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp143I | GATC | 1 cut(s) | 116 |
| BspACI | CCGC | 1 cut(s) | 29 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BssECI | CCNNGG | 1 cut(s) | 141 |
| BssMI | GATC | 1 cut(s) | 116 |
| Bst6I | CTCTTC | 1 cut(s) | 218 |
| BstDEI | CTNAG | 1 cut(s) | 41 |
| BstDSI | CCRYGG | 1 cut(s) | 141 |
| BstF5I | GGATG | 4 cut(s) | 104, 154, 190, 270 |
| BstKTI | GATC | 1 cut(s) | 119 |
| BstMBI | GATC | 1 cut(s) | 116 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| BtgI | CCRYGG | 1 cut(s) | 141 |
| BtsCI | GGATG | 4 cut(s) | 104, 154, 190, 270 |
| CseI | GACGC | 1 cut(s) | 301 |
| CviAII | CATG | 2 cut(s) | 193, 288 |
| CviJI | RGCY | 3 cut(s) | 94, 137, 245 |
| CviKI_1 | RGCY | 3 cut(s) | 94, 137, 245 |
| DdeI | CTNAG | 1 cut(s) | 41 |
| DpnI | GATC | 1 cut(s) | 118 |
| DpnII | GATC | 1 cut(s) | 116 |
| Eam1104I | CTCTTC | 1 cut(s) | 218 |
| EarI | CTCTTC | 1 cut(s) | 218 |
| FaeI | CATG | 2 cut(s) | 196, 291 |
| FaiI | YATR | 6 cut(s) | 75, 194, 203, 236, 249, 289 |
| FaqI | GGGAC | 1 cut(s) | 48 |
| FatI | CATG | 2 cut(s) | 192, 287 |
| FokI | GGATG | 4 cut(s) | 111, 161, 197, 277 |
| FspBI | CTAG | 1 cut(s) | 84 |
| GsaI | CCCAGC | 1 cut(s) | 98 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HgaI | GACGC | 1 cut(s) | 301 |
| Hin1II | CATG | 2 cut(s) | 196, 291 |
| HindIII | AAGCTT | 1 cut(s) | 243 |
| HinfI | GANTC | 2 cut(s) | 70, 211 |
| HphI | GGTGA | 1 cut(s) | 242 |
| Hpy188III | TCNNGA | 1 cut(s) | 12 |
| HpyAV | CCTTC | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 2 cut(s) | 152, 178 |
| HpyF3I | CTNAG | 1 cut(s) | 41 |
| Hsp92II | CATG | 2 cut(s) | 196, 291 |
| Kzo9I | GATC | 1 cut(s) | 116 |
| LpnPI | CCDG | 2 cut(s) | 80, 282 |
| LweI | GCATC | 4 cut(s) | 70, 139, 150, 255 |
| MaeI | CTAG | 1 cut(s) | 84 |
| MalI | GATC | 1 cut(s) | 118 |
| MboI | GATC | 1 cut(s) | 116 |
| MboII | GAAGA | 1 cut(s) | 235 |
| MluCI | AATT | 1 cut(s) | 15 |
| MlyI | GAGTC | 1 cut(s) | 205 |
| MnlI | CCTC | 7 cut(s) | 19, 51, 84, 174, 221, 232, 276 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| NdeII | GATC | 1 cut(s) | 116 |
| NlaIII | CATG | 2 cut(s) | 196, 291 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| PspFI | CCCAGC | 1 cut(s) | 94 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| Sau3AI | GATC | 1 cut(s) | 116 |
| SchI | GAGTC | 1 cut(s) | 205 |
| SetI | ASST | 5 cut(s) | 62, 125, 232, 247, 287 |
| SfaNI | GCATC | 4 cut(s) | 70, 139, 150, 255 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| SmlI | CTYRAG | 1 cut(s) | 5 |
| SmoI | CTYRAG | 1 cut(s) | 5 |
| Sse9I | AATT | 1 cut(s) | 15 |
| SsiI | CCGC | 1 cut(s) | 29 |
| SspMI | CTAG | 1 cut(s) | 84 |
| TaqI | TCGA | 2 cut(s) | 20, 68 |
| TasI | AATT | 1 cut(s) | 15 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| TspDTI | ATGAA | 2 cut(s) | 62, 236 |
| XapI | RAATTY | 1 cut(s) | 15 |
| XspI | CTAG | 1 cut(s) | 84 |