Rmu_sc0005811.1_g000005

heparanase-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005811.1
Physical Location & Seq
Forward (+)
18015 .. 22129
4115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005811.1_g000005.1.cds

Sequence Viewer

Length: 1518 bp
atgcttttgtgtttgagcttcactgatggcgttgatgttaatccattagctgagtggtgcgactacaaccactgtccttggggatctgcatctgtgttaaatttgaacttgtctcatcctctgcttgccaagtcaattcaagctttcaatcagttgaggatcagaattgggggttccttgcaagatcaagtattgtatggtgtaggagatttgaaatatccatgccatcctttcagaaagcagaagggtgggttgtttggattttctacaggatgtttacctatgagtagatgggatgagcttaaccattttttcagcaagacgaggccccttgtcacatttagtttgaatgcactgtcagggaggcaccacaaaggcgcggatgtttgggttggagattgggactctagcaatgcctatgattttattaattatacagtttcgaagggctaccacataaattcatgggagttgggtaatgagctctgtggtaatggtgttggagctagagttggagctgaacagtatggaaaagacatgatgaagcttaaacaaattgtcaaccagttgtacaatgactcccacataaagcctgcaattgtaggacctggaggattctatgatcaaaagtggtttgccacgcttcttcaggtttctggttcaggcgtagtcaatgttgtcactcagcatctttacaatctgggtccaggtgttgatcccaagttgatgcaaaagatattggatccgttttacttggaccatatatctggtacattcgataatcttgcagcaacagtaagacagcatggaccttgggcttctatatgggttggagagtctggaggagcctataacagcggcggtcataatgtatctgacacatatgtgaacagcttttggtatttggatcagcttggaatgtctgccaagtacaatactgcagtatattgcaggcagtccctagttggtgggcactacggtcttctcaacagaacctcatttgttcccaaccctgattactacagtgcacttctgtggcatcgacttatgggacaaagtgttctcgctgttgaccgtaacggggcaccgcacttgcgcgtttatgctcattgttcaaaaggaagcgccggtataaccctactcctcatcaatttaagcaatcagactgatttcactgtcgatgttaaaaatgttctggagttcgatacagctgctcgatcaagaaacactgacaaaggaaatcatttcagtcatggtcttaagagaacactttcatgggttggtctcaaagcatcagatggaccgttacatagaaaagaataccatctgactccaaaagacgggaaccttagaagcaaaatcatggtcctcaatggagttccattggaaattaccaaggacggaaacatcccggaattagaacctgttcttgttcctacaaattctcctctatcgatcacctctttgtccctcaagtttgttgtgctgcctcactttgaggctccagcttgtggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

505

Amino Acids

55.78

Weight (kDa)

8.25

Isoelectric Point (pI)

30.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 366, 1084
AccB7I CCANNNNNTGG 1 cut(s) 1511
AccII CGCG 2 cut(s) 380, 1098
AciI CCGC 4 cut(s) 380, 858, 861, 1088
AclWI GGATC 6 cut(s) 91, 167, 710, 737, 750, 915
AcsI RAATTY 3 cut(s) 100, 460, 1441
AcuI CTGAAG 1 cut(s) 632
AfaI GTAC 3 cut(s) 572, 772, 932
AfiI CCNNNNNNNGG 3 cut(s) 1081, 1340, 1511
AflII CTTAAG 1 cut(s) 1259
AgsI TTSAA 6 cut(s) 106, 140, 148, 214, 349, 1116
AjnI CCWGG 2 cut(s) 607, 706
AleI CACNNNNGTG 2 cut(s) 884, 1033
AloI GAACNNNNNNTCC 2 cut(s) 1044, 1076
Alw21I GWGCWC 2 cut(s) 486, 1030
Alw26I GTCTC 2 cut(s) 117, 1289
Alw44I GTGCAC 1 cut(s) 1026
AlwI GGATC 6 cut(s) 91, 167, 710, 737, 750, 915
AoxI GGCC 1 cut(s) 326
ApaLI GTGCAC 1 cut(s) 1026
ApeKI GCWGC 3 cut(s) 788, 1211, 1486
ApoI RAATTY 3 cut(s) 100, 460, 1441
ArsI GACNNNNNNTTYG 2 cut(s) 1350, 1382
AseI ATTAAT 1 cut(s) 429
Asp700I GAANNNNTTC 2 cut(s) 1270, 1425
AspLEI GCGC 3 cut(s) 380, 1098, 1127
AspS9I GGNCC 7 cut(s) 327, 605, 704, 757, 809, 1301, 1366
AsuC2I CCSGG 1 cut(s) 1412
AsuHPI GGTGA 1 cut(s) 1450
AsuII TTCGAA 1 cut(s) 443
AvaII GGWCC 6 cut(s) 605, 704, 757, 809, 1301, 1366
BaeGI GKGCMC 3 cut(s) 975, 1030, 1087
BamHI GGATCC 1 cut(s) 742
BanI GGYRCC 2 cut(s) 366, 1084
BanII GRGCYC 1 cut(s) 486
BbsI GAAGAC 1 cut(s) 974
Bbv12I GWGCWC 2 cut(s) 486, 1030
BbvI GCAGC 3 cut(s) 800, 1198, 1473
BccI CCATC 5 cut(s) 20, 234, 285, 1292, 1332
BcgI CGANNNNNNTGC 4 cut(s) 767, 801, 1193, 1227
BciT130I CCWGG 2 cut(s) 609, 708
BclI TGATCA 1 cut(s) 622
BcnI CCSGG 1 cut(s) 1412
BcoDI GTCTC 2 cut(s) 117, 1289
BfaI CTAG 3 cut(s) 408, 507, 962
BfmI CTRYAG 3 cut(s) 267, 939, 1021
BfoI RGCGCY 1 cut(s) 1128
BfrI CTTAAG 1 cut(s) 1259
BisI GCNGC 4 cut(s) 789, 859, 1212, 1487
BlsI GCNGC 4 cut(s) 790, 860, 1213, 1488
Bme1390I CCNGG 3 cut(s) 609, 708, 1412
Bme18I GGWCC 6 cut(s) 605, 704, 757, 809, 1301, 1366
BmgT120I GGNCC 7 cut(s) 327, 605, 704, 757, 809, 1301, 1366
BmiI GGNNCC 9 cut(s) 175, 329, 368, 705, 744, 847, 1086, 1346, 1503
BmrFI CCNGG 3 cut(s) 609, 708, 1412
BmsI GCATC 5 cut(s) 98, 697, 717, 1048, 1301
BpiI GAAGAC 1 cut(s) 974
BpmI CTGGAG 4 cut(s) 630, 861, 1217, 1488
Bpu14I TTCGAA 1 cut(s) 443
BpuEI CTTGAG 1 cut(s) 1457
BpuMI CCSGG 1 cut(s) 1412
Bsa29I ATCGAT 1 cut(s) 1454
BsaBI GATNNNNATC 2 cut(s) 39, 88
BsaI GGTCTC 1 cut(s) 1289
BsaJI CCNNGG 3 cut(s) 77, 812, 1395
BsaXI ACNNNNNCTCC 6 cut(s) 495, 525, 563, 593, 1429, 1459
Bsc4I CCNNNNNNNGG 3 cut(s) 1081, 1340, 1511
Bse118I RCCGGY 1 cut(s) 1127
Bse1I ACTGG 1 cut(s) 565
Bse3DI GCAATG 1 cut(s) 418
Bse8I GATNNNNATC 2 cut(s) 39, 88
BseBI CCWGG 2 cut(s) 609, 708
BseCI ATCGAT 1 cut(s) 1454
BseDI CCNNGG 3 cut(s) 77, 812, 1395
BseGI GGATG 6 cut(s) 115, 226, 278, 301, 388, 1407
BseJI GATNNNNATC 2 cut(s) 39, 88
BseLI CCNNNNNNNGG 3 cut(s) 1081, 1340, 1511
BseMI GCAATG 1 cut(s) 418
BseMII CTCAG 2 cut(s) 42, 698
BseNI ACTGG 1 cut(s) 565
BseRI GAGGAG 3 cut(s) 858, 1133, 1437
BseSI GKGCMC 3 cut(s) 975, 1030, 1087
BseXI GCAGC 3 cut(s) 800, 1198, 1473
Bsh1236I CGCG 2 cut(s) 380, 1098
BshFI GGCC 1 cut(s) 328
BshNI GGYRCC 2 cut(s) 366, 1084
BshVI ATCGAT 1 cut(s) 1454
BsiHKAI GWGCWC 2 cut(s) 486, 1030
BsiSI CCGG 2 cut(s) 1128, 1412
BslFI GGGAC 4 cut(s) 416, 943, 1065, 1453
BslI CCNNNNNNNGG 3 cut(s) 1081, 1340, 1511
BsmAI GTCTC 2 cut(s) 117, 1289
BsmFI GGGAC 4 cut(s) 416, 943, 1065, 1453
BsmI GAATGC 1 cut(s) 355
BsnI GGCC 1 cut(s) 328
Bso31I GGTCTC 1 cut(s) 1289
Bsp119I TTCGAA 1 cut(s) 443
Bsp1286I GDGCHC 4 cut(s) 486, 975, 1030, 1087
Bsp1407I TGTACA 1 cut(s) 570
Bsp143I GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
BspACI CCGC 4 cut(s) 380, 858, 861, 1088
BspANI GGCC 1 cut(s) 328
BspCNI CTCAG 2 cut(s) 43, 697
BspDI ATCGAT 1 cut(s) 1454
BspFNI CGCG 2 cut(s) 380, 1098
BspLI GGNNCC 9 cut(s) 175, 329, 368, 705, 744, 847, 1086, 1346, 1503
BspMAI CTGCAG 1 cut(s) 943
BspPI GGATC 6 cut(s) 91, 167, 710, 737, 750, 915
BspT104I TTCGAA 1 cut(s) 443
BspT107I GGYRCC 2 cut(s) 366, 1084
BspTI CTTAAG 1 cut(s) 1259
BspTNI GGTCTC 1 cut(s) 1289
BsrDI GCAATG 1 cut(s) 418
BsrFI RCCGGY 1 cut(s) 1127
BsrGI TGTACA 1 cut(s) 570
BsrI ACTGG 1 cut(s) 565
BssAI RCCGGY 1 cut(s) 1127
BssECI CCNNGG 3 cut(s) 77, 812, 1395
BssMI GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
BssT1I CCWWGG 3 cut(s) 77, 812, 1395
Bst2UI CCWGG 2 cut(s) 609, 708
BstAFI CTTAAG 1 cut(s) 1259
BstAUI TGTACA 1 cut(s) 570
BstBI TTCGAA 1 cut(s) 443
BstC8I GCNNGC 3 cut(s) 126, 594, 953
BstDEI CTNAG 3 cut(s) 51, 684, 1349
BstF5I GGATG 6 cut(s) 115, 226, 278, 301, 388, 1407
BstFNI CGCG 2 cut(s) 380, 1098
BstH2I RGCGCY 1 cut(s) 1128
BstHHI GCGC 3 cut(s) 380, 1098, 1127
BstKTI GATC 9 cut(s) 86, 162, 187, 625, 718, 745, 910, 1220, 1458
BstMAI GTCTC 2 cut(s) 117, 1289
BstMBI GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
BstNI CCWGG 2 cut(s) 609, 708
BstSCI CCNGG 3 cut(s) 607, 706, 1410
BstSFI CTRYAG 3 cut(s) 267, 939, 1021
BstSLI GKGCMC 3 cut(s) 975, 1030, 1087
BstUI CGCG 2 cut(s) 380, 1098
BstV1I GCAGC 3 cut(s) 800, 1198, 1473
BstV2I GAAGAC 1 cut(s) 974
BstX2I RGATCY 2 cut(s) 83, 742
BstXI CCANNNNNNTGG 1 cut(s) 767
BstYI RGATCY 2 cut(s) 83, 742
Bsu15I ATCGAT 1 cut(s) 1454
BsuRI GGCC 1 cut(s) 328
BsuTUI ATCGAT 1 cut(s) 1454
BtsCI GGATG 6 cut(s) 115, 226, 278, 301, 388, 1407
BtsIMutI CAGTG 6 cut(s) 21, 70, 353, 1030, 1173, 1227
Cac8I GCNNGC 3 cut(s) 126, 594, 953
CfoI GCGC 3 cut(s) 380, 1098, 1127
Cfr10I RCCGGY 1 cut(s) 1127
Cfr13I GGNCC 7 cut(s) 327, 605, 704, 757, 809, 1301, 1366
ClaI ATCGAT 1 cut(s) 1454
Csp6I GTAC 3 cut(s) 571, 771, 931
CspCI CAANNNNNGTGG 2 cut(s) 59, 94
CviAII CATG 7 cut(s) 222, 465, 538, 806, 1253, 1275, 1363
CviQI GTAC 3 cut(s) 571, 771, 931
DdeI CTNAG 3 cut(s) 51, 684, 1349
DpnI GATC 9 cut(s) 85, 161, 186, 624, 717, 744, 909, 1219, 1457
DpnII GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
Ecl136II GAGCTC 1 cut(s) 484
Eco130I CCWWGG 3 cut(s) 77, 812, 1395
Eco24I GRGCYC 1 cut(s) 486
Eco31I GGTCTC 1 cut(s) 1289
Eco47I GGWCC 6 cut(s) 605, 704, 757, 809, 1301, 1366
Eco53kI GAGCTC 1 cut(s) 484
Eco57I CTGAAG 1 cut(s) 632
EcoICRI GAGCTC 1 cut(s) 484
EcoO109I RGGNCCY 2 cut(s) 327, 605
EcoRII CCWGG 2 cut(s) 607, 706
EcoT14I CCWWGG 3 cut(s) 77, 812, 1395
EcoT38I GRGCYC 1 cut(s) 486
ErhI CCWWGG 3 cut(s) 77, 812, 1395
FaeI CATG 7 cut(s) 225, 468, 541, 809, 1256, 1278, 1366
FaqI GGGAC 4 cut(s) 416, 943, 1065, 1453
FatI CATG 7 cut(s) 221, 464, 537, 805, 1252, 1274, 1362
FauNDI CATATG 1 cut(s) 883
FbaI TGATCA 1 cut(s) 622
Fnu4HI GCNGC 4 cut(s) 789, 859, 1212, 1487
FokI GGATG 6 cut(s) 102, 213, 285, 308, 395, 1394
FriOI GRGCYC 1 cut(s) 486
Fsp4HI GCNGC 4 cut(s) 789, 859, 1212, 1487
FspBI CTAG 3 cut(s) 408, 507, 962
GlaI GCGC 3 cut(s) 379, 1097, 1126
GluI GCNGC 4 cut(s) 789, 859, 1212, 1487
GsuI CTGGAG 4 cut(s) 630, 861, 1217, 1488
HaeII RGCGCY 1 cut(s) 1128
HaeIII GGCC 1 cut(s) 328
HapII CCGG 2 cut(s) 1128, 1412
HhaI GCGC 3 cut(s) 380, 1098, 1127
Hin1II CATG 7 cut(s) 225, 468, 541, 809, 1256, 1278, 1366
Hin6I GCGC 3 cut(s) 378, 1096, 1125
HinP1I GCGC 3 cut(s) 378, 1096, 1125
HincII GTYRAC 2 cut(s) 562, 1072
HindII GTYRAC 2 cut(s) 562, 1072
HindIII AAGCTT 2 cut(s) 141, 545
HinfI GANTC 5 cut(s) 404, 578, 615, 836, 1330
HpaII CCGG 2 cut(s) 1128, 1412
HphI GGTGA 1 cut(s) 1450
Hpy166II GTNNAC 5 cut(s) 278, 562, 889, 1028, 1072
Hpy188I TCNGA 6 cut(s) 164, 236, 877, 1164, 1297, 1329
Hpy188III TCNNGA 3 cut(s) 840, 1196, 1221
Hpy8I GTNNAC 5 cut(s) 278, 562, 889, 1028, 1072
HpyAV CCTTC 2 cut(s) 238, 439
HpyCH4V TGCA 9 cut(s) 89, 181, 353, 596, 730, 788, 941, 951, 1028
HpyF3I CTNAG 3 cut(s) 51, 684, 1349
Hsp92II CATG 7 cut(s) 225, 468, 541, 809, 1256, 1278, 1366
HspAI GCGC 3 cut(s) 378, 1096, 1125
Ksp22I TGATCA 1 cut(s) 622
Kzo9I GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
LmnI GCTCC 4 cut(s) 503, 515, 845, 1507
Lsp1109I GCAGC 3 cut(s) 800, 1198, 1473
LweI GCATC 5 cut(s) 98, 697, 717, 1048, 1301
MaeI CTAG 3 cut(s) 408, 507, 962
MaeIII GTNAC 4 cut(s) 334, 679, 1076, 1305
MalI GATC 9 cut(s) 85, 161, 186, 624, 717, 744, 909, 1219, 1457
MboI GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
MboII GAAGA 2 cut(s) 638, 974
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 2 cut(s) 83, 742
MhlI GDGCHC 4 cut(s) 486, 975, 1030, 1087
MlyI GAGTC 4 cut(s) 398, 572, 845, 1324
MmeI TCCRAC 4 cut(s) 373, 481, 493, 811
MroXI GAANNNNTTC 2 cut(s) 1270, 1425
MseI TTAA 8 cut(s) 39, 98, 303, 429, 549, 1154, 1185, 1260
MslI CAYNNNNRTG 3 cut(s) 884, 1033, 1273
MspA1I CMGCKG 2 cut(s) 858, 1211
MspCI CTTAAG 1 cut(s) 1259
MspI CCGG 2 cut(s) 1128, 1412
MspR9I CCNGG 3 cut(s) 609, 708, 1412
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 1 cut(s) 355
MvaI CCWGG 2 cut(s) 609, 708
MvnI CGCG 2 cut(s) 380, 1098
NciI CCSGG 1 cut(s) 1412
NdeI CATATG 1 cut(s) 883
NdeII GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
NlaIII CATG 7 cut(s) 225, 468, 541, 809, 1256, 1278, 1366
NlaIV GGNNCC 9 cut(s) 175, 329, 368, 705, 744, 847, 1086, 1346, 1503
NmuCI GTSAC 2 cut(s) 334, 679
NspV TTCGAA 1 cut(s) 443
OliI CACNNNNGTG 2 cut(s) 884, 1033
PctI GAATGC 1 cut(s) 355
PdmI GAANNNNTTC 2 cut(s) 1270, 1425
PfeI GAWTC 1 cut(s) 615
PflMI CCANNNNNTGG 1 cut(s) 1511
PfoI TCCNGGA 1 cut(s) 1410
PkrI GCNGC 4 cut(s) 790, 860, 1213, 1488
PleI GAGTC 4 cut(s) 398, 572, 844, 1324
PpsI GAGTC 4 cut(s) 398, 572, 844, 1324
PpuMI RGGWCCY 1 cut(s) 605
PshBI ATTAAT 1 cut(s) 429
Psp124BI GAGCTC 1 cut(s) 486
Psp5II RGGWCCY 1 cut(s) 605
Psp6I CCWGG 2 cut(s) 607, 706
PspGI CCWGG 2 cut(s) 607, 706
PspN4I GGNNCC 9 cut(s) 175, 329, 368, 705, 744, 847, 1086, 1346, 1503
PspPI GGNCC 7 cut(s) 327, 605, 704, 757, 809, 1301, 1366
PspPPI RGGWCCY 1 cut(s) 605
PstI CTGCAG 1 cut(s) 943
PsuI RGATCY 2 cut(s) 83, 742
PvuII CAGCTG 1 cut(s) 1211
RsaI GTAC 3 cut(s) 572, 772, 932
RsaNI GTAC 3 cut(s) 571, 771, 931
RseI CAYNNNNRTG 3 cut(s) 884, 1033, 1273
SacI GAGCTC 1 cut(s) 486
SaqAI TTAA 8 cut(s) 39, 98, 303, 429, 549, 1154, 1185, 1260
SatI GCNGC 4 cut(s) 789, 859, 1212, 1487
Sau3AI GATC 9 cut(s) 83, 159, 184, 622, 715, 742, 907, 1217, 1455
Sau96I GGNCC 7 cut(s) 327, 605, 704, 757, 809, 1301, 1366
SchI GAGTC 4 cut(s) 398, 572, 845, 1324
ScrFI CCNGG 3 cut(s) 609, 708, 1412
SduI GDGCHC 4 cut(s) 486, 975, 1030, 1087
SfaNI GCATC 5 cut(s) 98, 697, 717, 1048, 1301
SfcI CTRYAG 3 cut(s) 267, 939, 1021
SfuI TTCGAA 1 cut(s) 443
SinI GGWCC 6 cut(s) 605, 704, 757, 809, 1301, 1366
SmiMI CAYNNNNRTG 3 cut(s) 884, 1033, 1273
SmlI CTYRAG 2 cut(s) 1259, 1472
SmoI CTYRAG 2 cut(s) 1259, 1472
SsiI CCGC 4 cut(s) 380, 858, 861, 1088
SspMI CTAG 3 cut(s) 408, 507, 962
SstI GAGCTC 1 cut(s) 486
StyD4I CCNGG 3 cut(s) 607, 706, 1410
StyI CCWWGG 3 cut(s) 77, 812, 1395
TaqI TCGA 7 cut(s) 443, 777, 1042, 1179, 1203, 1216, 1454
TatI WGTACW 2 cut(s) 570, 930
TauI GCSGC 1 cut(s) 861
TfiI GAWTC 1 cut(s) 615
Tru1I TTAA 8 cut(s) 39, 98, 303, 429, 549, 1154, 1185, 1260
Tru9I TTAA 8 cut(s) 39, 98, 303, 429, 549, 1154, 1185, 1260
TscAI CASTG 6 cut(s) 28, 77, 360, 1030, 1180, 1234
TseFI GTSAC 2 cut(s) 334, 679
TseI GCWGC 3 cut(s) 788, 1211, 1486
Tsp45I GTSAC 2 cut(s) 334, 679
TspDTI ATGAA 3 cut(s) 453, 557, 1263
TspGWI ACGGA 2 cut(s) 735, 1416
TspRI CASTG 6 cut(s) 28, 77, 360, 1030, 1180, 1234
Van91I CCANNNNNTGG 1 cut(s) 1511
Vha464I CTTAAG 1 cut(s) 1259
VneI GTGCAC 1 cut(s) 1026
VpaK11BI GGWCC 6 cut(s) 605, 704, 757, 809, 1301, 1366
VspI ATTAAT 1 cut(s) 429
XapI RAATTY 3 cut(s) 100, 460, 1441
XcmI CCANNNNNNNNNTGG 1 cut(s) 51
XmnI GAANNNNTTC 2 cut(s) 1270, 1425
XspI CTAG 3 cut(s) 408, 507, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.