Rh7CG052600

heparanase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0004478
Physical Location & Seq
Forward (+)
3813610 .. 3816667
3058 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG052600.1

Sequence Viewer

Length: 957 bp
ATGCTTTTGTGTTTGAGCTGCACTGATGGCTTTGATGTTAATCCATTAGCTGAGTGGTGCGACTACAACCACTGTCCTTGGGGATCTGCATCTGTGTTAAATTTGAACTTGTCTCATCCTCTTCTTGCCAAGTCAATTCAAGCTTTCAATCAGTTGAGGATCAGAATTGGGGGTTCCTTGCAAGATCAAGTATTGTATGGTGTAGAAGATTTGAAATATCCTTGCCATCCTTTCAGAAAGCAGAAGGGTGGGTTGTTTGGATTTTCTACAGGATGTTTACCTATGAGTAGATGGGATGAGCTTAACCATTTTTTCAGTAAGACAAGGCCCCTTGTCACATTTAGCTTGAATGCACTGTCAGGGAGGCACCACAAAGGCGCGGGTGTTTGGGTTGGAGATTGGGACTCTAGCAATGCTTATGATTTTATTAATTATACAGTTTCGAAGGGCTACCAGATAAATTCATGGGAGTTGGATATGATTATGAAAAGATATGAACATCTTTCTTGCCGTTTGTTTTGTTTTTGCTTCACATGTATTCTTGTCTATCTTGGTGTAGGTAATGAGCTCTGTGGTAATGGTGTTGAAGCTAGAGTTCGAGCTGAACAGTATGGAAAAGACATGATGAAGCTTAAACAAATTGTCAACCAGTTGTACAATGACTCCCACATAAAGCCTGCAATTGTAGGACCTGGAGGATTCTATGATCAAAAGTGGTTTGCCAGGCTTCTTCAGGTTTCTGGTTCAGGCGTAGTCAATGTTGTCACTCAGCATCTTTACAATCTGGGTCCAGGTGTTGATCCCAAGTTGATGCAAAAGATATTGGATCAATGTTACTTGGACCATATATCTGGTACATTCGATAATCTTGCCGCAACAGTGAAACAGCACGGACCTTGGGCTTCTATTTGGGTTGGAGAGTCTGGAGGAGCCTATAACAGCAGTGAATGTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko05205 map00531 map01100 map05205
Pfam Domains
Protein Families
Glyco_hydro_79n

Protein Analysis

318

Amino Acids

35.67

Weight (kDa)

7.12

Isoelectric Point (pI)

31.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_79n PF03662 17 - 158 1.1e-63 Glycosyl hydrolase family 79, N-terminal domain
Glyco_hydro_79n PF03662 185 - 315 5.8e-54 Glycosyl hydrolase family 79, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 366
AccII CGCG 1 cut(s) 380
AciI CCGC 2 cut(s) 380, 873
AclWI GGATC 4 cut(s) 91, 167, 794, 834
AcsI RAATTY 2 cut(s) 100, 460
AcuI CTGAAG 1 cut(s) 716
AfaI GTAC 2 cut(s) 656, 856
AflIII ACRYGT 1 cut(s) 533
AgsI TTSAA 6 cut(s) 106, 140, 148, 214, 349, 587
AjnI CCWGG 3 cut(s) 691, 722, 790
AluBI AGCT 9 cut(s) 18, 50, 143, 301, 345, 568, 590, 602, 631
AluI AGCT 9 cut(s) 18, 50, 143, 301, 345, 568, 590, 602, 631
Alw21I GWGCWC 1 cut(s) 570
Alw26I GTCTC 1 cut(s) 117
AlwI GGATC 4 cut(s) 91, 167, 794, 834
AoxI GGCC 1 cut(s) 326
ApeKI GCWGC 1 cut(s) 18
ApoI RAATTY 2 cut(s) 100, 460
AseI ATTAAT 1 cut(s) 429
AspLEI GCGC 1 cut(s) 380
AspS9I GGNCC 5 cut(s) 327, 689, 788, 841, 893
AsuII TTCGAA 1 cut(s) 443
AvaII GGWCC 4 cut(s) 689, 788, 841, 893
BanI GGYRCC 1 cut(s) 366
BanII GRGCYC 1 cut(s) 570
Bbv12I GWGCWC 1 cut(s) 570
BbvI GCAGC 1 cut(s) 5
BccI CCATC 3 cut(s) 20, 234, 285
BceAI ACGGC 1 cut(s) 495
BcgI CGANNNNNNTGC 2 cut(s) 851, 885
BciT130I CCWGG 3 cut(s) 693, 724, 792
BclI TGATCA 1 cut(s) 706
BcoDI GTCTC 1 cut(s) 117
BfaI CTAG 2 cut(s) 408, 591
BfmI CTRYAG 1 cut(s) 267
BisI GCNGC 2 cut(s) 19, 873
BlsI GCNGC 2 cut(s) 20, 874
Bme1390I CCNGG 3 cut(s) 693, 724, 792
Bme18I GGWCC 4 cut(s) 689, 788, 841, 893
BmgT120I GGNCC 5 cut(s) 327, 689, 788, 841, 893
BmiI GGNNCC 5 cut(s) 175, 329, 368, 789, 931
BmrFI CCNGG 3 cut(s) 693, 724, 792
BmsI GCATC 3 cut(s) 98, 781, 801
BpmI CTGGAG 2 cut(s) 714, 945
Bpu14I TTCGAA 1 cut(s) 443
BsaBI GATNNNNATC 2 cut(s) 39, 88
BsaJI CCNNGG 2 cut(s) 77, 896
BsaXI ACNNNNNCTCC 2 cut(s) 647, 677
Bse1I ACTGG 1 cut(s) 649
Bse3DI GCAATG 1 cut(s) 418
Bse8I GATNNNNATC 2 cut(s) 39, 88
BseBI CCWGG 3 cut(s) 693, 724, 792
BseDI CCNNGG 2 cut(s) 77, 896
BseGI GGATG 4 cut(s) 115, 226, 278, 301
BseJI GATNNNNATC 2 cut(s) 39, 88
BseMI GCAATG 1 cut(s) 418
BseMII CTCAG 2 cut(s) 42, 782
BseNI ACTGG 1 cut(s) 649
BseRI GAGGAG 1 cut(s) 942
BseXI GCAGC 1 cut(s) 5
BsgI GTGCAG 1 cut(s) 4
Bsh1236I CGCG 1 cut(s) 380
BshFI GGCC 1 cut(s) 328
BshNI GGYRCC 1 cut(s) 366
BsiHKAI GWGCWC 1 cut(s) 570
BslFI GGGAC 1 cut(s) 416
BsmAI GTCTC 1 cut(s) 117
BsmFI GGGAC 1 cut(s) 416
BsmI GAATGC 1 cut(s) 355
BsnI GGCC 1 cut(s) 328
Bsp119I TTCGAA 1 cut(s) 443
Bsp1286I GDGCHC 1 cut(s) 570
Bsp1407I TGTACA 1 cut(s) 654
Bsp143I GATC 6 cut(s) 83, 159, 184, 706, 799, 826
BspACI CCGC 2 cut(s) 380, 873
BspANI GGCC 1 cut(s) 328
BspCNI CTCAG 2 cut(s) 43, 781
BspFNI CGCG 1 cut(s) 380
BspLI GGNNCC 5 cut(s) 175, 329, 368, 789, 931
BspPI GGATC 4 cut(s) 91, 167, 794, 834
BspT104I TTCGAA 1 cut(s) 443
BspT107I GGYRCC 1 cut(s) 366
BsrDI GCAATG 1 cut(s) 418
BsrGI TGTACA 1 cut(s) 654
BsrI ACTGG 1 cut(s) 649
BssECI CCNNGG 2 cut(s) 77, 896
BssMI GATC 6 cut(s) 83, 159, 184, 706, 799, 826
BssT1I CCWWGG 2 cut(s) 77, 896
Bst2UI CCWGG 3 cut(s) 693, 724, 792
Bst4CI ACNGT 5 cut(s) 74, 357, 439, 609, 880
Bst6I CTCTTC 1 cut(s) 126
BstAUI TGTACA 1 cut(s) 654
BstBI TTCGAA 1 cut(s) 443
BstC8I GCNNGC 1 cut(s) 678
BstDEI CTNAG 2 cut(s) 51, 768
BstF5I GGATG 4 cut(s) 115, 226, 278, 301
BstFNI CGCG 1 cut(s) 380
BstHHI GCGC 1 cut(s) 380
BstKTI GATC 6 cut(s) 86, 162, 187, 709, 802, 829
BstMAI GTCTC 1 cut(s) 117
BstMBI GATC 6 cut(s) 83, 159, 184, 706, 799, 826
BstMWI GCNNNNNNNGC 1 cut(s) 27
BstNI CCWGG 3 cut(s) 693, 724, 792
BstNSI RCATGY 1 cut(s) 537
BstSCI CCNGG 3 cut(s) 691, 722, 790
BstSFI CTRYAG 1 cut(s) 267
BstUI CGCG 1 cut(s) 380
BstV1I GCAGC 1 cut(s) 5
BstX2I RGATCY 1 cut(s) 83
BstXI CCANNNNNNTGG 1 cut(s) 851
BstYI RGATCY 1 cut(s) 83
BsuRI GGCC 1 cut(s) 328
BtsCI GGATG 4 cut(s) 115, 226, 278, 301
BtsI GCAGTG 1 cut(s) 949
BtsIMutI CAGTG 5 cut(s) 21, 70, 353, 885, 949
Cac8I GCNNGC 1 cut(s) 678
CfoI GCGC 1 cut(s) 380
Cfr13I GGNCC 5 cut(s) 327, 689, 788, 841, 893
Csp6I GTAC 2 cut(s) 655, 855
CspCI CAANNNNNGTGG 2 cut(s) 59, 94
CviAII CATG 3 cut(s) 465, 534, 622
CviQI GTAC 2 cut(s) 655, 855
DdeI CTNAG 2 cut(s) 51, 768
DpnI GATC 6 cut(s) 85, 161, 186, 708, 801, 828
DpnII GATC 6 cut(s) 83, 159, 184, 706, 799, 826
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
Ecl136II GAGCTC 1 cut(s) 568
Eco130I CCWWGG 2 cut(s) 77, 896
Eco24I GRGCYC 1 cut(s) 570
Eco47I GGWCC 4 cut(s) 689, 788, 841, 893
Eco53kI GAGCTC 1 cut(s) 568
Eco57I CTGAAG 1 cut(s) 716
EcoICRI GAGCTC 1 cut(s) 568
EcoO109I RGGNCCY 2 cut(s) 327, 689
EcoRII CCWGG 3 cut(s) 691, 722, 790
EcoT14I CCWWGG 2 cut(s) 77, 896
EcoT38I GRGCYC 1 cut(s) 570
ErhI CCWWGG 2 cut(s) 77, 896
FaeI CATG 3 cut(s) 468, 537, 625
FaqI GGGAC 1 cut(s) 416
FatI CATG 3 cut(s) 464, 533, 621
FauI CCCGC 1 cut(s) 373
FbaI TGATCA 1 cut(s) 706
Fnu4HI GCNGC 2 cut(s) 19, 873
FokI GGATG 4 cut(s) 102, 213, 285, 308
FriOI GRGCYC 1 cut(s) 570
Fsp4HI GCNGC 2 cut(s) 19, 873
FspBI CTAG 2 cut(s) 408, 591
GlaI GCGC 1 cut(s) 379
GluI GCNGC 2 cut(s) 19, 873
GsuI CTGGAG 2 cut(s) 714, 945
HaeIII GGCC 1 cut(s) 328
HhaI GCGC 1 cut(s) 380
Hin1II CATG 3 cut(s) 468, 537, 625
Hin6I GCGC 1 cut(s) 378
HinP1I GCGC 1 cut(s) 378
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HindIII AAGCTT 2 cut(s) 141, 629
HinfI GANTC 4 cut(s) 404, 662, 699, 920
Hpy166II GTNNAC 2 cut(s) 278, 646
Hpy188I TCNGA 3 cut(s) 164, 236, 956
Hpy188III TCNNGA 1 cut(s) 924
Hpy8I GTNNAC 2 cut(s) 278, 646
HpyAV CCTTC 2 cut(s) 238, 439
HpyCH4III ACNGT 5 cut(s) 74, 357, 439, 609, 880
HpyCH4V TGCA 6 cut(s) 21, 89, 181, 353, 680, 814
HpyF10VI GCNNNNNNNGC 1 cut(s) 27
HpyF3I CTNAG 2 cut(s) 51, 768
Hsp92II CATG 3 cut(s) 468, 537, 625
HspAI GCGC 1 cut(s) 378
Ksp22I TGATCA 1 cut(s) 706
Kzo9I GATC 6 cut(s) 83, 159, 184, 706, 799, 826
LmnI GCTCC 1 cut(s) 929
Lsp1109I GCAGC 1 cut(s) 5
LweI GCATC 3 cut(s) 98, 781, 801
MaeI CTAG 2 cut(s) 408, 591
MaeIII GTNAC 3 cut(s) 334, 763, 833
MalI GATC 6 cut(s) 85, 161, 186, 708, 801, 828
MboI GATC 6 cut(s) 83, 159, 184, 706, 799, 826
MboII GAAGA 3 cut(s) 113, 218, 722
MfeI CAATTG 1 cut(s) 681
MflI RGATCY 1 cut(s) 83
MhlI GDGCHC 1 cut(s) 570
MluCI AATT 7 cut(s) 100, 135, 165, 430, 460, 639, 681
MlyI GAGTC 3 cut(s) 398, 656, 929
MmeI TCCRAC 3 cut(s) 373, 453, 895
MnlI CCTC 5 cut(s) 129, 150, 357, 689, 920
MseI TTAA 5 cut(s) 39, 98, 303, 429, 633
MspR9I CCNGG 3 cut(s) 693, 724, 792
MunI CAATTG 1 cut(s) 681
Mva1269I GAATGC 1 cut(s) 355
MvaI CCWGG 3 cut(s) 693, 724, 792
MvnI CGCG 1 cut(s) 380
MwoI GCNNNNNNNGC 1 cut(s) 27
NdeII GATC 6 cut(s) 83, 159, 184, 706, 799, 826
NlaIII CATG 3 cut(s) 468, 537, 625
NlaIV GGNNCC 5 cut(s) 175, 329, 368, 789, 931
NmuCI GTSAC 2 cut(s) 334, 763
NspI RCATGY 1 cut(s) 537
NspV TTCGAA 1 cut(s) 443
PciI ACATGT 1 cut(s) 533
PctI GAATGC 1 cut(s) 355
PfeI GAWTC 1 cut(s) 699
PkrI GCNGC 2 cut(s) 20, 874
PleI GAGTC 3 cut(s) 398, 656, 928
PpsI GAGTC 3 cut(s) 398, 656, 928
PpuMI RGGWCCY 1 cut(s) 689
PscI ACATGT 1 cut(s) 533
PshBI ATTAAT 1 cut(s) 429
Psp124BI GAGCTC 1 cut(s) 570
Psp5II RGGWCCY 1 cut(s) 689
Psp6I CCWGG 3 cut(s) 691, 722, 790
PspGI CCWGG 3 cut(s) 691, 722, 790
PspN4I GGNNCC 5 cut(s) 175, 329, 368, 789, 931
PspPI GGNCC 5 cut(s) 327, 689, 788, 841, 893
PspPPI RGGWCCY 1 cut(s) 689
PsuI RGATCY 1 cut(s) 83
RsaI GTAC 2 cut(s) 656, 856
RsaNI GTAC 2 cut(s) 655, 855
SacI GAGCTC 1 cut(s) 570
SaqAI TTAA 5 cut(s) 39, 98, 303, 429, 633
SatI GCNGC 2 cut(s) 19, 873
Sau3AI GATC 6 cut(s) 83, 159, 184, 706, 799, 826
Sau96I GGNCC 5 cut(s) 327, 689, 788, 841, 893
SchI GAGTC 3 cut(s) 398, 656, 929
ScrFI CCNGG 3 cut(s) 693, 724, 792
SduI GDGCHC 1 cut(s) 570
SfaNI GCATC 3 cut(s) 98, 781, 801
SfcI CTRYAG 1 cut(s) 267
SfuI TTCGAA 1 cut(s) 443
SinI GGWCC 4 cut(s) 689, 788, 841, 893
Sse9I AATT 7 cut(s) 100, 135, 165, 430, 460, 639, 681
SsiI CCGC 2 cut(s) 380, 873
SspMI CTAG 2 cut(s) 408, 591
SstI GAGCTC 1 cut(s) 570
StyD4I CCNGG 3 cut(s) 691, 722, 790
StyI CCWWGG 2 cut(s) 77, 896
TaaI ACNGT 5 cut(s) 74, 357, 439, 609, 880
TaqI TCGA 3 cut(s) 443, 598, 861
TasI AATT 7 cut(s) 100, 135, 165, 430, 460, 639, 681
TatI WGTACW 1 cut(s) 654
TauI GCSGC 1 cut(s) 875
TfiI GAWTC 1 cut(s) 699
Tru1I TTAA 5 cut(s) 39, 98, 303, 429, 633
Tru9I TTAA 5 cut(s) 39, 98, 303, 429, 633
TscAI CASTG 5 cut(s) 28, 77, 360, 885, 949
TseFI GTSAC 2 cut(s) 334, 763
TseI GCWGC 1 cut(s) 18
Tsp45I GTSAC 2 cut(s) 334, 763
TspDTI ATGAA 4 cut(s) 453, 500, 510, 641
TspGWI ACGGA 1 cut(s) 906
TspRI CASTG 5 cut(s) 28, 77, 360, 885, 949
VpaK11BI GGWCC 4 cut(s) 689, 788, 841, 893
VspI ATTAAT 1 cut(s) 429
XapI RAATTY 2 cut(s) 100, 460
XceI RCATGY 1 cut(s) 537
XcmI CCANNNNNNNNNTGG 1 cut(s) 51
XspI CTAG 2 cut(s) 408, 591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.