Peroxiredoxin Q
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26060 AT3G26060 AT3G26060 |
| fragaria_vesca | FvH4_1g09250 |
| malus_domestica | MD02G1099800.v1.1 MD15G1222600.v1.1 |
| prunus_persica | Prupe.7G193200_v2.0.a1 |
| pyrus_communis | pycom02g07760 pycom15g19670 |
| rosa_chinensis | RchiOBHm_Chr2g0095781 |
| rosa_laevigata | RLG00000016592 |
| rosa_multiflora | Rmu_sc0005941.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00146100 |
| rosa_rugosa | Rorug02G0053200 |
| rosa_samantha | Rh2AG101700 Rh2BG103300 Rh2CG105600 |
| rosa_wichuraiana | Rw2G007720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 573 |
| AcsI | RAATTY | 3 cut(s) | 103, 217, 263 |
| AcuI | CTGAAG | 1 cut(s) | 638 |
| AfaI | GTAC | 1 cut(s) | 437 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 168 |
| AgsI | TTSAA | 4 cut(s) | 229, 268, 364, 566 |
| AjnI | CCWGG | 2 cut(s) | 313, 523 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 142, 174 |
| AluBI | AGCT | 4 cut(s) | 127, 371, 442, 622 |
| AluI | AGCT | 4 cut(s) | 127, 371, 442, 622 |
| Alw21I | GWGCWC | 2 cut(s) | 323, 379 |
| Alw26I | GTCTC | 1 cut(s) | 94 |
| Alw44I | GTGCAC | 1 cut(s) | 319 |
| Ama87I | CYCGRG | 1 cut(s) | 593 |
| AoxI | GGCC | 1 cut(s) | 118 |
| ApaLI | GTGCAC | 1 cut(s) | 319 |
| ApoI | RAATTY | 3 cut(s) | 103, 217, 263 |
| AsuHPI | GGTGA | 2 cut(s) | 410, 490 |
| AvaI | CYCGRG | 1 cut(s) | 593 |
| BaeGI | GKGCMC | 1 cut(s) | 323 |
| BbsI | GAAGAC | 1 cut(s) | 535 |
| Bbv12I | GWGCWC | 2 cut(s) | 323, 379 |
| BccI | CCATC | 4 cut(s) | 82, 163, 233, 508 |
| BciT130I | CCWGG | 2 cut(s) | 315, 525 |
| BcoDI | GTCTC | 1 cut(s) | 94 |
| BglII | AGATCT | 1 cut(s) | 505 |
| Bme1390I | CCNGG | 2 cut(s) | 315, 525 |
| BmeT110I | CYCGRG | 1 cut(s) | 593 |
| BmiI | GGNNCC | 1 cut(s) | 210 |
| BmrFI | CCNGG | 2 cut(s) | 315, 525 |
| BmsI | GCATC | 1 cut(s) | 419 |
| BpiI | GAAGAC | 1 cut(s) | 535 |
| BpmI | CTGGAG | 1 cut(s) | 393 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| Bsa29I | ATCGAT | 1 cut(s) | 606 |
| BsaJI | CCNNGG | 1 cut(s) | 314 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 40, 70, 366, 396 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 168 |
| Bse1I | ACTGG | 1 cut(s) | 583 |
| BseBI | CCWGG | 2 cut(s) | 315, 525 |
| BseCI | ATCGAT | 1 cut(s) | 606 |
| BseDI | CCNNGG | 1 cut(s) | 314 |
| BseGI | GGATG | 1 cut(s) | 244 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BseMII | CTCAG | 1 cut(s) | 420 |
| BseNI | ACTGG | 1 cut(s) | 583 |
| BseSI | GKGCMC | 1 cut(s) | 323 |
| BshFI | GGCC | 1 cut(s) | 120 |
| BshVI | ATCGAT | 1 cut(s) | 606 |
| BsiHKAI | GWGCWC | 2 cut(s) | 323, 379 |
| BsiHKCI | CYCGRG | 1 cut(s) | 593 |
| BslFI | GGGAC | 1 cut(s) | 529 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BsmAI | GTCTC | 1 cut(s) | 94 |
| BsmFI | GGGAC | 1 cut(s) | 529 |
| BsnI | GGCC | 1 cut(s) | 120 |
| BsoBI | CYCGRG | 1 cut(s) | 593 |
| Bsp1286I | GDGCHC | 2 cut(s) | 323, 379 |
| Bsp143I | GATC | 2 cut(s) | 232, 505 |
| BspANI | GGCC | 1 cut(s) | 120 |
| BspCNI | CTCAG | 1 cut(s) | 419 |
| BspDI | ATCGAT | 1 cut(s) | 606 |
| BspLI | GGNNCC | 1 cut(s) | 210 |
| BsrI | ACTGG | 1 cut(s) | 583 |
| BssECI | CCNNGG | 1 cut(s) | 314 |
| BssMI | GATC | 2 cut(s) | 232, 505 |
| Bst2UI | CCWGG | 2 cut(s) | 315, 525 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 169 |
| BstDEI | CTNAG | 2 cut(s) | 406, 458 |
| BstF5I | GGATG | 1 cut(s) | 244 |
| BstKTI | GATC | 2 cut(s) | 235, 508 |
| BstMAI | GTCTC | 1 cut(s) | 94 |
| BstMBI | GATC | 2 cut(s) | 232, 505 |
| BstNI | CCWGG | 2 cut(s) | 315, 525 |
| BstSCI | CCNGG | 2 cut(s) | 313, 523 |
| BstSLI | GKGCMC | 1 cut(s) | 323 |
| BstV2I | GAAGAC | 1 cut(s) | 535 |
| BstX2I | RGATCY | 1 cut(s) | 505 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 116 |
| BstYI | RGATCY | 1 cut(s) | 505 |
| Bsu15I | ATCGAT | 1 cut(s) | 606 |
| BsuRI | GGCC | 1 cut(s) | 120 |
| BsuTUI | ATCGAT | 1 cut(s) | 606 |
| BtsCI | GGATG | 1 cut(s) | 244 |
| BtsIMutI | CAGTG | 1 cut(s) | 614 |
| ClaI | ATCGAT | 1 cut(s) | 606 |
| Csp6I | GTAC | 1 cut(s) | 436 |
| CviQI | GTAC | 1 cut(s) | 436 |
| DdeI | CTNAG | 2 cut(s) | 406, 458 |
| DpnI | GATC | 2 cut(s) | 234, 507 |
| DpnII | GATC | 2 cut(s) | 232, 505 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 169 |
| EarI | CTCTTC | 2 cut(s) | 21, 169 |
| Eco57I | CTGAAG | 1 cut(s) | 638 |
| Eco88I | CYCGRG | 1 cut(s) | 593 |
| EcoRII | CCWGG | 2 cut(s) | 313, 523 |
| FaiI | YATR | 6 cut(s) | 54, 117, 354, 538, 540, 603 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 14, 46 |
| FaqI | GGGAC | 1 cut(s) | 529 |
| FauNDI | CATATG | 1 cut(s) | 538 |
| FblI | GTMKAC | 1 cut(s) | 573 |
| FokI | GGATG | 1 cut(s) | 251 |
| GsuI | CTGGAG | 1 cut(s) | 393 |
| HaeIII | GGCC | 1 cut(s) | 120 |
| HindIII | AAGCTT | 1 cut(s) | 440 |
| HinfI | GANTC | 3 cut(s) | 310, 347, 404 |
| HphI | GGTGA | 2 cut(s) | 410, 490 |
| Hpy166II | GTNNAC | 3 cut(s) | 196, 321, 574 |
| Hpy188I | TCNGA | 2 cut(s) | 344, 505 |
| Hpy188III | TCNNGA | 3 cut(s) | 236, 388, 545 |
| Hpy8I | GTNNAC | 3 cut(s) | 196, 321, 574 |
| HpyCH4V | TGCA | 3 cut(s) | 321, 428, 628 |
| HpyF3I | CTNAG | 2 cut(s) | 406, 458 |
| Kzo9I | GATC | 2 cut(s) | 232, 505 |
| LmnI | GCTCC | 1 cut(s) | 374 |
| LweI | GCATC | 1 cut(s) | 419 |
| MalI | GATC | 2 cut(s) | 234, 507 |
| MboI | GATC | 2 cut(s) | 232, 505 |
| MboII | GAAGA | 6 cut(s) | 8, 69, 150, 156, 184, 540 |
| MflI | RGATCY | 1 cut(s) | 505 |
| MhlI | GDGCHC | 2 cut(s) | 323, 379 |
| MluCI | AATT | 5 cut(s) | 103, 110, 133, 217, 263 |
| MlyI | GAGTC | 2 cut(s) | 319, 398 |
| MmeI | TCCRAC | 1 cut(s) | 613 |
| MnlI | CCTC | 8 cut(s) | 20, 46, 131, 151, 172, 266, 460, 474 |
| MseI | TTAA | 2 cut(s) | 222, 637 |
| MslI | CAYNNNNRTG | 1 cut(s) | 606 |
| MspR9I | CCNGG | 2 cut(s) | 315, 525 |
| MvaI | CCWGG | 2 cut(s) | 315, 525 |
| NdeI | CATATG | 1 cut(s) | 538 |
| NdeII | GATC | 2 cut(s) | 232, 505 |
| NlaIV | GGNNCC | 1 cut(s) | 210 |
| PfeI | GAWTC | 1 cut(s) | 347 |
| PleI | GAGTC | 2 cut(s) | 318, 398 |
| PpsI | GAGTC | 2 cut(s) | 318, 398 |
| Psp6I | CCWGG | 2 cut(s) | 313, 523 |
| PspGI | CCWGG | 2 cut(s) | 313, 523 |
| PspN4I | GGNNCC | 1 cut(s) | 210 |
| PsuI | RGATCY | 1 cut(s) | 505 |
| RsaI | GTAC | 1 cut(s) | 437 |
| RsaNI | GTAC | 1 cut(s) | 436 |
| RseI | CAYNNNNRTG | 1 cut(s) | 606 |
| SaqAI | TTAA | 2 cut(s) | 222, 637 |
| Sau3AI | GATC | 2 cut(s) | 232, 505 |
| SchI | GAGTC | 2 cut(s) | 319, 398 |
| ScrFI | CCNGG | 2 cut(s) | 315, 525 |
| SduI | GDGCHC | 2 cut(s) | 323, 379 |
| SfaNI | GCATC | 1 cut(s) | 419 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 606 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| Sse9I | AATT | 5 cut(s) | 103, 110, 133, 217, 263 |
| StyD4I | CCNGG | 2 cut(s) | 313, 523 |
| TaqI | TCGA | 1 cut(s) | 606 |
| TasI | AATT | 5 cut(s) | 103, 110, 133, 217, 263 |
| TatI | WGTACW | 1 cut(s) | 435 |
| TfiI | GAWTC | 1 cut(s) | 347 |
| Tru1I | TTAA | 2 cut(s) | 222, 637 |
| Tru9I | TTAA | 2 cut(s) | 222, 637 |
| TscAI | CASTG | 1 cut(s) | 621 |
| TspDTI | ATGAA | 2 cut(s) | 369, 624 |
| TspRI | CASTG | 1 cut(s) | 621 |
| VneI | GTGCAC | 1 cut(s) | 319 |
| XapI | RAATTY | 3 cut(s) | 103, 217, 263 |
| XmiI | GTMKAC | 1 cut(s) | 573 |