Peroxiredoxin Q
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26060 AT3G26060 AT3G26060 |
| fragaria_vesca | FvH4_1g09250 |
| malus_domestica | MD02G1099800.v1.1 MD15G1222600.v1.1 |
| prunus_persica | Prupe.7G193200_v2.0.a1 |
| pyrus_communis | pycom02g07760 pycom15g19670 |
| rosa_chinensis | RchiOBHm_Chr2g0095781 |
| rosa_laevigata | RLG00000016592 |
| rosa_multiflora | Rmu_sc0005941.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00146100 |
| rosa_rugosa | Rorug02G0053200 |
| rosa_samantha | Rh2AG101700 Rh2BG103300 Rh2CG105600 |
| rosa_wichuraiana | Rw2G007720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 768 |
| AciI | CCGC | 1 cut(s) | 131 |
| AcsI | RAATTY | 3 cut(s) | 298, 412, 458 |
| AcuI | CTGAAG | 1 cut(s) | 833 |
| AfaI | GTAC | 2 cut(s) | 164, 632 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 363 |
| AgsI | TTSAA | 5 cut(s) | 137, 424, 463, 559, 761 |
| AjnI | CCWGG | 2 cut(s) | 508, 718 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 337, 369 |
| AluBI | AGCT | 4 cut(s) | 322, 566, 637, 817 |
| AluI | AGCT | 4 cut(s) | 322, 566, 637, 817 |
| Alw21I | GWGCWC | 2 cut(s) | 518, 574 |
| Alw26I | GTCTC | 2 cut(s) | 289, 497 |
| Alw44I | GTGCAC | 1 cut(s) | 514 |
| Ama87I | CYCGRG | 1 cut(s) | 788 |
| AoxI | GGCC | 1 cut(s) | 313 |
| ApaLI | GTGCAC | 1 cut(s) | 514 |
| ApoI | RAATTY | 3 cut(s) | 298, 412, 458 |
| AsuHPI | GGTGA | 2 cut(s) | 605, 685 |
| AvaI | CYCGRG | 1 cut(s) | 788 |
| BaeGI | GKGCMC | 1 cut(s) | 518 |
| BbsI | GAAGAC | 1 cut(s) | 730 |
| Bbv12I | GWGCWC | 2 cut(s) | 518, 574 |
| BccI | CCATC | 4 cut(s) | 277, 358, 428, 703 |
| BciT130I | CCWGG | 2 cut(s) | 510, 720 |
| BcoDI | GTCTC | 2 cut(s) | 289, 497 |
| BglII | AGATCT | 1 cut(s) | 700 |
| Bme1390I | CCNGG | 2 cut(s) | 510, 720 |
| BmeT110I | CYCGRG | 1 cut(s) | 788 |
| BmiI | GGNNCC | 1 cut(s) | 405 |
| BmrFI | CCNGG | 2 cut(s) | 510, 720 |
| BmsI | GCATC | 1 cut(s) | 614 |
| BpiI | GAAGAC | 1 cut(s) | 730 |
| BpmI | CTGGAG | 2 cut(s) | 492, 588 |
| BpuEI | CTTGAG | 2 cut(s) | 132, 302 |
| Bsa29I | ATCGAT | 1 cut(s) | 801 |
| BsaJI | CCNNGG | 1 cut(s) | 509 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 235, 265, 561, 591 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 363 |
| Bse1I | ACTGG | 1 cut(s) | 778 |
| BseBI | CCWGG | 2 cut(s) | 510, 720 |
| BseCI | ATCGAT | 1 cut(s) | 801 |
| BseDI | CCNNGG | 1 cut(s) | 509 |
| BseGI | GGATG | 1 cut(s) | 439 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 363 |
| BseMII | CTCAG | 1 cut(s) | 615 |
| BseNI | ACTGG | 1 cut(s) | 778 |
| BseSI | GKGCMC | 1 cut(s) | 518 |
| BshFI | GGCC | 1 cut(s) | 315 |
| BshVI | ATCGAT | 1 cut(s) | 801 |
| BsiHKAI | GWGCWC | 2 cut(s) | 518, 574 |
| BsiHKCI | CYCGRG | 1 cut(s) | 788 |
| BslFI | GGGAC | 1 cut(s) | 724 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 363 |
| BsmAI | GTCTC | 2 cut(s) | 289, 497 |
| BsmFI | GGGAC | 1 cut(s) | 724 |
| BsnI | GGCC | 1 cut(s) | 315 |
| BsoBI | CYCGRG | 1 cut(s) | 788 |
| Bsp1286I | GDGCHC | 2 cut(s) | 518, 574 |
| Bsp143I | GATC | 2 cut(s) | 427, 700 |
| BspACI | CCGC | 1 cut(s) | 131 |
| BspANI | GGCC | 1 cut(s) | 315 |
| BspCNI | CTCAG | 1 cut(s) | 614 |
| BspDI | ATCGAT | 1 cut(s) | 801 |
| BspLI | GGNNCC | 1 cut(s) | 405 |
| BsrI | ACTGG | 1 cut(s) | 778 |
| BssECI | CCNNGG | 1 cut(s) | 509 |
| BssMI | GATC | 2 cut(s) | 427, 700 |
| Bst2UI | CCWGG | 2 cut(s) | 510, 720 |
| Bst4CI | ACNGT | 1 cut(s) | 162 |
| Bst6I | CTCTTC | 2 cut(s) | 216, 364 |
| BstDEI | CTNAG | 2 cut(s) | 601, 653 |
| BstF5I | GGATG | 1 cut(s) | 439 |
| BstKTI | GATC | 2 cut(s) | 430, 703 |
| BstMAI | GTCTC | 2 cut(s) | 289, 497 |
| BstMBI | GATC | 2 cut(s) | 427, 700 |
| BstNI | CCWGG | 2 cut(s) | 510, 720 |
| BstSCI | CCNGG | 2 cut(s) | 508, 718 |
| BstSLI | GKGCMC | 1 cut(s) | 518 |
| BstV2I | GAAGAC | 1 cut(s) | 730 |
| BstX2I | RGATCY | 1 cut(s) | 700 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 311 |
| BstYI | RGATCY | 1 cut(s) | 700 |
| Bsu15I | ATCGAT | 1 cut(s) | 801 |
| BsuRI | GGCC | 1 cut(s) | 315 |
| BsuTUI | ATCGAT | 1 cut(s) | 801 |
| BtsCI | GGATG | 1 cut(s) | 439 |
| BtsIMutI | CAGTG | 1 cut(s) | 809 |
| ClaI | ATCGAT | 1 cut(s) | 801 |
| Csp6I | GTAC | 2 cut(s) | 163, 631 |
| CviQI | GTAC | 2 cut(s) | 163, 631 |
| DdeI | CTNAG | 2 cut(s) | 601, 653 |
| DpnI | GATC | 2 cut(s) | 429, 702 |
| DpnII | GATC | 2 cut(s) | 427, 700 |
| Eam1104I | CTCTTC | 2 cut(s) | 216, 364 |
| EarI | CTCTTC | 2 cut(s) | 216, 364 |
| Eco57I | CTGAAG | 1 cut(s) | 833 |
| Eco88I | CYCGRG | 1 cut(s) | 788 |
| EcoRII | CCWGG | 2 cut(s) | 508, 718 |
| FaiI | YATR | 5 cut(s) | 312, 549, 733, 735, 798 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 209, 241 |
| FaqI | GGGAC | 1 cut(s) | 724 |
| FauNDI | CATATG | 1 cut(s) | 733 |
| FblI | GTMKAC | 1 cut(s) | 768 |
| FokI | GGATG | 1 cut(s) | 446 |
| GsuI | CTGGAG | 2 cut(s) | 492, 588 |
| HaeIII | GGCC | 1 cut(s) | 315 |
| HindIII | AAGCTT | 1 cut(s) | 635 |
| HinfI | GANTC | 3 cut(s) | 505, 542, 599 |
| HphI | GGTGA | 2 cut(s) | 605, 685 |
| Hpy166II | GTNNAC | 5 cut(s) | 26, 113, 391, 516, 769 |
| Hpy188I | TCNGA | 2 cut(s) | 539, 700 |
| Hpy188III | TCNNGA | 4 cut(s) | 149, 431, 583, 740 |
| Hpy8I | GTNNAC | 5 cut(s) | 26, 113, 391, 516, 769 |
| HpyCH4III | ACNGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 3 cut(s) | 516, 623, 823 |
| HpyF3I | CTNAG | 2 cut(s) | 601, 653 |
| Kzo9I | GATC | 2 cut(s) | 427, 700 |
| LmnI | GCTCC | 2 cut(s) | 81, 569 |
| LweI | GCATC | 1 cut(s) | 614 |
| MalI | GATC | 2 cut(s) | 429, 702 |
| MboI | GATC | 2 cut(s) | 427, 700 |
| MboII | GAAGA | 7 cut(s) | 86, 203, 264, 345, 351, 379, 735 |
| MfeI | CAATTG | 1 cut(s) | 19 |
| MflI | RGATCY | 1 cut(s) | 700 |
| MhlI | GDGCHC | 2 cut(s) | 518, 574 |
| MluCI | AATT | 7 cut(s) | 19, 39, 298, 305, 328, 412, 458 |
| MlyI | GAGTC | 2 cut(s) | 499, 593 |
| MmeI | TCCRAC | 1 cut(s) | 808 |
| MseI | TTAA | 2 cut(s) | 417, 832 |
| MslI | CAYNNNNRTG | 1 cut(s) | 801 |
| MspR9I | CCNGG | 2 cut(s) | 510, 720 |
| MunI | CAATTG | 1 cut(s) | 19 |
| MvaI | CCWGG | 2 cut(s) | 510, 720 |
| NdeI | CATATG | 1 cut(s) | 733 |
| NdeII | GATC | 2 cut(s) | 427, 700 |
| NlaIV | GGNNCC | 1 cut(s) | 405 |
| PfeI | GAWTC | 1 cut(s) | 542 |
| PleI | GAGTC | 2 cut(s) | 499, 593 |
| PpsI | GAGTC | 2 cut(s) | 499, 593 |
| Psp6I | CCWGG | 2 cut(s) | 508, 718 |
| PspGI | CCWGG | 2 cut(s) | 508, 718 |
| PspN4I | GGNNCC | 1 cut(s) | 405 |
| PsuI | RGATCY | 1 cut(s) | 700 |
| RsaI | GTAC | 2 cut(s) | 164, 632 |
| RsaNI | GTAC | 2 cut(s) | 163, 631 |
| RseI | CAYNNNNRTG | 1 cut(s) | 801 |
| SaqAI | TTAA | 2 cut(s) | 417, 832 |
| Sau3AI | GATC | 2 cut(s) | 427, 700 |
| SchI | GAGTC | 2 cut(s) | 499, 593 |
| ScrFI | CCNGG | 2 cut(s) | 510, 720 |
| SduI | GDGCHC | 2 cut(s) | 518, 574 |
| SfaNI | GCATC | 1 cut(s) | 614 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 801 |
| SmlI | CTYRAG | 2 cut(s) | 147, 317 |
| SmoI | CTYRAG | 2 cut(s) | 147, 317 |
| Sse9I | AATT | 7 cut(s) | 19, 39, 298, 305, 328, 412, 458 |
| SsiI | CCGC | 1 cut(s) | 131 |
| StyD4I | CCNGG | 2 cut(s) | 508, 718 |
| TaaI | ACNGT | 1 cut(s) | 162 |
| TaqI | TCGA | 1 cut(s) | 801 |
| TasI | AATT | 7 cut(s) | 19, 39, 298, 305, 328, 412, 458 |
| TatI | WGTACW | 1 cut(s) | 630 |
| TfiI | GAWTC | 1 cut(s) | 542 |
| Tru1I | TTAA | 2 cut(s) | 417, 832 |
| Tru9I | TTAA | 2 cut(s) | 417, 832 |
| TscAI | CASTG | 1 cut(s) | 816 |
| TspDTI | ATGAA | 3 cut(s) | 17, 564, 819 |
| TspRI | CASTG | 1 cut(s) | 816 |
| VneI | GTGCAC | 1 cut(s) | 514 |
| XapI | RAATTY | 3 cut(s) | 298, 412, 458 |
| XmiI | GTMKAC | 1 cut(s) | 768 |