Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006346.1

Orthogroup ID

OG0012830

Physical Location & Seq

Genomic Coordinates Forward (+)

258 .. 4137

Gene Structure 3880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

atgctactggacggaatcgaagacgaggacaaatggctcgcagaaggcatcgccggcattcaacaccacgccttctacatgcatcgagctctggacgctaacaatctcagagacgctctcaaatactcggctcagatgctctccgagctccgaacctcgaggctctcgcctcacaaatactacgagctctatatgcgagcgttcgatgagttgaggaagctggagatgttcttcaaggacgagagcaggcatggcgtttcgatcattgatctctacgagcttgttcagcacgctggcaacattctaccgagattgtatctcctatgtacggtaggatctgtgtacattaaatcaaaggaagcacctgccaaagacgtgcttaaagaccttgtggaaatgtgtcgtgctgttcaacatccgattcgggggctctttctgaggagttacctttctcaagtcagtagagataagttacctgatcttggttccgagtatgaaggaggttctgacactgttacggatgccgtagattttgtgctacaaaattttacagagatgaataagctttgggttcgaatgcagtatcagggacctggtcgggcgagagagaagcatgaaaaggaaagaagcgaacttcgtgatctagtagggaaaaatctccttgttctcagtcagatagagggtgtggaactccaaatgtacaaagacactgttcttcccagagtattagagcaggttatcaactgtaaagatgagctggcccagtattatttgatggattgcctgatccaggtctttccggatgagtaccacttgcagacactggagacattattgggtgcttgcccccagcttcagccaacagtggatatcaagacagtgctatctcaattaatggacaggttatcaaattatgctgcttcaagtgcagatgtattacccgaatttcttcaagtcgaagctttcgctaaattaagtagtgctattgggagggtgatagaagcacaagttgacatgcctattgttggagccatatctttgtacgtctctcttcttacattcacactccgtgttcatcccgatcgtctagattatgtggatcaagtactgggagcatgtgttaggaagctaccgggaaacactaaggttgaagacaagagagccataaagcaggttgtcgcactattaagtgctcctttggaaaagtacaatgacattgtcacagccctcacactttctaattatcctcgagttatggatcaccttgataatggaacaaataaagtcatggcaatggttatcattcaaagcattatgaaaaacgactcttgtatctccactgctgataaggtggaggtattgtttgaattaatcaaagggctgatcaaggatttggatggtacttctgatgatgagcttgacgaggaggattttcatgatgagcaaaattctgttgctcgccttatacacatgctttataatgatgatccagaagaaatgttaaagactcatgagagcatgataatcctaagatccctttgtgagtcagtctcctttgaacagataatcctgggagcccatatcccattggctttctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0030904 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042147 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098796

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vps35

Protein Analysis

532

Amino Acids

60.52

Weight (kDa)

5.02

Isoelectric Point (pI)

39.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vps35	PF03635	12 - 504	7e-201	Vacuolar protein sorting-associated protein 35

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75850 AT1G75850
fragaria_vesca	FvH4_2g38180 FvH4_2g38180
malus_domestica	MD15G1010200.v1.1
prunus_persica	Prupe.1G362700_v2.0.a1
pyrus_communis	pycom15g00840
rosa_chinensis	RchiOBHm_Chr6g0303301
rosa_laevigata	RLG00000011094
rosa_multiflora	Rmu_sc0006346.1_g000001 Rmu_sc0019430.1_g000001
rosa_roxburghii	Rroxscaffold_7G00164890
rosa_rugosa	Rorug06G0320200
rosa_samantha	Rh6AG434600 Rh6BG468500 Rh6CG446600 Rh6DG433300
rosa_wichuraiana	Rw6G037630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1479
AarI	CACCTGC	1 cut(s)	373
AbsI	CCTCGAGG	1 cut(s)	157
Acc36I	ACCTGC	3 cut(s)	373, 724, 1162
AccIII	TCCGGA	1 cut(s)	799
AclWI	GGATC	6 cut(s)	343, 781, 1107, 1266, 1481, 1527
AcsI	RAATTY	3 cut(s)	544, 944, 1447
AcuI	CTGAAG	1 cut(s)	839
AdeI	CACNNNGTG	1 cut(s)	1070
AfaI	GTAC	8 cut(s)	328, 344, 701, 809, 1043, 1107, 1208, 1402
AfiI	CCNNNNNNNGG	5 cut(s)	328, 425, 482, 790, 1025
AgsI	TTSAA	9 cut(s)	62, 235, 413, 924, 953, 1151, 1307, 1367, 1559
AjiI	CACGTC	1 cut(s)	376
AjnI	CCWGG	3 cut(s)	592, 789, 1569
AloI	GAACNNNNNNTCC	2 cut(s)	1551, 1583
Alw21I	GWGCWC	4 cut(s)	91, 150, 189, 1195
Alw26I	GTCTC	4 cut(s)	105, 821, 1051, 1555
AlwI	GGATC	6 cut(s)	343, 781, 1107, 1266, 1481, 1527
AlwNI	CAGNNNCTG	1 cut(s)	823
Ama87I	CYCGRG	2 cut(s)	157, 1248
Aor13HI	TCCGGA	1 cut(s)	799
AoxI	GGCC	1 cut(s)	759
ApeKI	GCWGC	1 cut(s)	917
ApoI	RAATTY	3 cut(s)	544, 944, 1447
AseI	ATTAAT	2 cut(s)	893, 1370
Asp700I	GAANNNNTTC	1 cut(s)	948
AspS9I	GGNCC	2 cut(s)	590, 760
AsuC2I	CCSGG	1 cut(s)	1134
AsuHPI	GGTGA	2 cut(s)	1006, 1253
AsuII	TTCGAA	1 cut(s)	574
AvaI	CYCGRG	2 cut(s)	157, 1248
AvaII	GGWCC	1 cut(s)	590
BaeI	ACNNNNGTAYC	2 cut(s)	1315, 1348
BanII	GRGCYC	5 cut(s)	91, 150, 189, 432, 1579
BbsI	GAAGAC	2 cut(s)	27, 1158
Bbv12I	GWGCWC	4 cut(s)	91, 150, 189, 1195
BbvI	GCAGC	1 cut(s)	904
BccI	CCATC	2 cut(s)	769, 1391
BceAI	ACGGC	1 cut(s)	509
BciT130I	CCWGG	3 cut(s)	594, 791, 1571
BclI	TGATCA	1 cut(s)	1383
BcnI	CCSGG	1 cut(s)	1134
BcoDI	GTCTC	4 cut(s)	105, 821, 1051, 1555
BfaI	CTAG	2 cut(s)	644, 1088
BfuAI	ACCTGC	3 cut(s)	373, 724, 1162
BisI	GCNGC	1 cut(s)	918
BlsI	GCNGC	1 cut(s)	919
BmcAI	AGTACT	1 cut(s)	1107
Bme1390I	CCNGG	4 cut(s)	594, 791, 1134, 1571
Bme18I	GGWCC	1 cut(s)	590
BmeT110I	CYCGRG	2 cut(s)	157, 1248
BmgBI	CACGTC	1 cut(s)	376
BmgT120I	GGNCC	2 cut(s)	590, 760
BmiI	GGNNCC	4 cut(s)	487, 591, 1030, 1576
BmrFI	CCNGG	4 cut(s)	594, 791, 1134, 1571
BmrI	ACTGGG	2 cut(s)	757, 1118
BmsI	GCATC	4 cut(s)	57, 91, 126, 511
BmuI	ACTGGG	2 cut(s)	757, 1118
BpiI	GAAGAC	2 cut(s)	27, 1158
BplI	GAGNNNNNCTC	4 cut(s)	102, 134, 1535, 1567
BpmI	CTGGAG	2 cut(s)	242, 845
Bpu14I	TTCGAA	1 cut(s)	574
BpuEI	CTTGAG	1 cut(s)	438
BpuMI	CCSGG	1 cut(s)	1134
BsaJI	CCNNGG	1 cut(s)	1570
BsaWI	WCCGGW	1 cut(s)	799
BsaXI	ACNNNNNCTCC	4 cut(s)	1104, 1134, 1346, 1376
Bsc4I	CCNNNNNNNGG	5 cut(s)	328, 425, 482, 790, 1025
Bse118I	RCCGGY	1 cut(s)	53
Bse1I	ACTGG	4 cut(s)	12, 763, 828, 1113
Bse3DI	GCAATG	1 cut(s)	1299
BseAI	TCCGGA	1 cut(s)	799
BseBI	CCWGG	3 cut(s)	594, 791, 1571
BseDI	CCNNGG	1 cut(s)	1570
BseGI	GGATG	5 cut(s)	415, 526, 808, 1075, 1402
BseLI	CCNNNNNNNGG	5 cut(s)	328, 425, 482, 790, 1025
BseMI	GCAATG	1 cut(s)	1299
BseMII	CTCAG	4 cut(s)	121, 146, 428, 682
BseNI	ACTGG	4 cut(s)	12, 763, 828, 1113
BseRI	GAGGAG	2 cut(s)	454, 1439
BseXI	GCAGC	1 cut(s)	904
BseYI	CCCAGC	1 cut(s)	849
BsgI	GTGCAG	1 cut(s)	948
Bsh1285I	CGRYCG	1 cut(s)	1084
BshFI	GGCC	1 cut(s)	761
BsiEI	CGRYCG	1 cut(s)	1084
BsiHKAI	GWGCWC	4 cut(s)	91, 150, 189, 1195
BsiHKCI	CYCGRG	2 cut(s)	157, 1248
BsiSI	CCGG	3 cut(s)	54, 800, 1133
BslFI	GGGAC	1 cut(s)	603
BslI	CCNNNNNNNGG	5 cut(s)	328, 425, 482, 790, 1025
BsmAI	GTCTC	4 cut(s)	105, 821, 1051, 1555
BsmBI	CGTCTC	2 cut(s)	105, 1051
BsmFI	GGGAC	1 cut(s)	603
BsmI	GAATGC	2 cut(s)	57, 582
BsnI	GGCC	1 cut(s)	761
BsoBI	CYCGRG	2 cut(s)	157, 1248
Bsp119I	TTCGAA	1 cut(s)	574
Bsp1286I	GDGCHC	6 cut(s)	91, 150, 189, 432, 1195, 1579
Bsp13I	TCCGGA	1 cut(s)	799
Bsp1407I	TGTACA	2 cut(s)	342, 699
BspANI	GGCC	1 cut(s)	761
BspCNI	CTCAG	4 cut(s)	120, 145, 429, 681
BspEI	TCCGGA	1 cut(s)	799
BspHI	TCATGA	2 cut(s)	1435, 1510
BspLI	GGNNCC	4 cut(s)	487, 591, 1030, 1576
BspMI	ACCTGC	3 cut(s)	373, 724, 1162
BspPI	GGATC	6 cut(s)	343, 781, 1107, 1266, 1481, 1527
BspT104I	TTCGAA	1 cut(s)	574
BsrDI	GCAATG	1 cut(s)	1299
BsrFI	RCCGGY	1 cut(s)	53
BsrGI	TGTACA	2 cut(s)	342, 699
BsrI	ACTGG	4 cut(s)	12, 763, 828, 1113
BssAI	RCCGGY	1 cut(s)	53
BssECI	CCNNGG	1 cut(s)	1570
Bst2UI	CCWGG	3 cut(s)	594, 791, 1571
Bst4CI	ACNGT	6 cut(s)	331, 514, 712, 746, 865, 880
Bst6I	CTCTTC	1 cut(s)	1056
BstAUI	TGTACA	2 cut(s)	342, 699
BstBI	TTCGAA	1 cut(s)	574
BstC8I	GCNNGC	9 cut(s)	39, 55, 198, 248, 291, 295, 759, 844, 1459
BstDEI	CTNAG	6 cut(s)	107, 132, 437, 668, 1143, 1529
BstENI	CCTNNNNNAGG	1 cut(s)	788
BstF5I	GGATG	5 cut(s)	415, 526, 808, 1075, 1402
BstMAI	GTCTC	4 cut(s)	105, 821, 1051, 1555
BstMCI	CGRYCG	1 cut(s)	1084
BstMWI	GCNNNNNNNGC	7 cut(s)	54, 95, 145, 193, 252, 286, 926
BstNI	CCWGG	3 cut(s)	594, 791, 1571
BstNSI	RCATGY	4 cut(s)	82, 1018, 1119, 1474
BstSCI	CCNGG	4 cut(s)	592, 789, 1132, 1569
BstV1I	GCAGC	1 cut(s)	904
BstV2I	GAAGAC	2 cut(s)	27, 1158
BstX2I	RGATCY	2 cut(s)	335, 1532
BstYI	RGATCY	2 cut(s)	335, 1532
BsuRI	GGCC	1 cut(s)	761
BtgZI	GCGATG	1 cut(s)	34
BtrI	CACGTC	1 cut(s)	376
BtsCI	GGATG	5 cut(s)	415, 526, 808, 1075, 1402
BtsI	GCAGTG	1 cut(s)	1338
BtsIMutI	CAGTG	6 cut(s)	510, 708, 821, 870, 885, 1338
BveI	ACCTGC	3 cut(s)	373, 724, 1162
Cac8I	GCNNGC	9 cut(s)	39, 55, 198, 248, 291, 295, 759, 844, 1459
CaiI	CAGNNNCTG	1 cut(s)	823
CciI	TCATGA	2 cut(s)	1435, 1510
Cfr10I	RCCGGY	1 cut(s)	53
Cfr13I	GGNCC	2 cut(s)	590, 760
CseI	GACGC	2 cut(s)	104, 122
CsiI	ACCWGGT	1 cut(s)	592
Csp6I	GTAC	8 cut(s)	327, 343, 700, 808, 1042, 1106, 1207, 1401
CviQI	GTAC	8 cut(s)	327, 343, 700, 808, 1042, 1106, 1207, 1401
DdeI	CTNAG	6 cut(s)	107, 132, 437, 668, 1143, 1529
DraIII	CACNNNGTG	1 cut(s)	1070
Eam1104I	CTCTTC	1 cut(s)	1056
EarI	CTCTTC	1 cut(s)	1056
Ecl136II	GAGCTC	3 cut(s)	89, 148, 187
Eco24I	GRGCYC	5 cut(s)	91, 150, 189, 432, 1579
Eco32I	GATATC	1 cut(s)	871
Eco47I	GGWCC	1 cut(s)	590
Eco53kI	GAGCTC	3 cut(s)	89, 148, 187
Eco57I	CTGAAG	1 cut(s)	839
Eco88I	CYCGRG	2 cut(s)	157, 1248
EcoICRI	GAGCTC	3 cut(s)	89, 148, 187
EcoNI	CCTNNNNNAGG	1 cut(s)	788
EcoO109I	RGGNCCY	1 cut(s)	590
EcoRII	CCWGG	3 cut(s)	592, 789, 1569
EcoRV	GATATC	1 cut(s)	871
EcoT22I	ATGCAT	1 cut(s)	84
EcoT38I	GRGCYC	5 cut(s)	91, 150, 189, 432, 1579
Esp3I	CGTCTC	2 cut(s)	105, 1051
FalI	AAGNNNNNCTT	4 cut(s)	363, 395, 1180, 1212
FaqI	GGGAC	1 cut(s)	603
FbaI	TGATCA	1 cut(s)	1383
Fnu4HI	GCNGC	1 cut(s)	918
FokI	GGATG	5 cut(s)	402, 533, 815, 1062, 1409
FriOI	GRGCYC	5 cut(s)	91, 150, 189, 432, 1579
Fsp4HI	GCNGC	1 cut(s)	918
FspBI	CTAG	2 cut(s)	644, 1088
GluI	GCNGC	1 cut(s)	918
GsaI	CCCAGC	1 cut(s)	853
GsuI	CTGGAG	2 cut(s)	242, 845
HaeIII	GGCC	1 cut(s)	761
HapII	CCGG	3 cut(s)	54, 800, 1133
HgaI	GACGC	2 cut(s)	104, 122
HincII	GTYRAC	1 cut(s)	1012
HindII	GTYRAC	1 cut(s)	1012
HindIII	AAGCTT	2 cut(s)	563, 960
HinfI	GANTC	5 cut(s)	15, 421, 1325, 1507, 1544
HpaII	CCGG	3 cut(s)	54, 800, 1133
HphI	GGTGA	2 cut(s)	1006, 1253
Hpy166II	GTNNAC	2 cut(s)	343, 1012
Hpy188III	TCNNGA	9 cut(s)	92, 638, 800, 874, 1079, 1088, 1436, 1490, 1511
Hpy8I	GTNNAC	2 cut(s)	343, 1012
HpyAV	CCTTC	3 cut(s)	38, 82, 491
HpyCH4III	ACNGT	6 cut(s)	331, 514, 712, 746, 865, 880
HpyCH4IV	ACGT	2 cut(s)	375, 1044
HpyCH4V	TGCA	4 cut(s)	82, 580, 817, 929
HpyF10VI	GCNNNNNNNGC	7 cut(s)	54, 95, 145, 193, 252, 286, 926
HpyF3I	CTNAG	6 cut(s)	107, 132, 437, 668, 1143, 1529
HpySE526I	ACGT	2 cut(s)	375, 1044
Kpn2I	TCCGGA	1 cut(s)	799
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Ksp22I	TGATCA	1 cut(s)	1383
LmnI	GCTCC	5 cut(s)	153, 1028, 1112, 1198, 1574
Lsp1109I	GCAGC	1 cut(s)	904
LweI	GCATC	4 cut(s)	57, 91, 126, 511
MabI	ACCWGGT	1 cut(s)	592
MaeI	CTAG	2 cut(s)	644, 1088
MaeII	ACGT	2 cut(s)	375, 1044
MaeIII	GTNAC	4 cut(s)	443, 471, 514, 1219
MboII	GAAGA	7 cut(s)	32, 223, 707, 941, 1043, 1163, 1505
MflI	RGATCY	2 cut(s)	335, 1532
MhlI	GDGCHC	6 cut(s)	91, 150, 189, 432, 1195, 1579
MluCI	AATT	8 cut(s)	544, 890, 910, 944, 971, 1240, 1367, 1447
MlyI	GAGTC	3 cut(s)	1319, 1501, 1553
MmeI	TCCRAC	1 cut(s)	1006
Mph1103I	ATGCAT	1 cut(s)	84
MroI	TCCGGA	1 cut(s)	799
MroNI	GCCGGC	1 cut(s)	53
MroXI	GAANNNNTTC	1 cut(s)	948
MseI	TTAA	7 cut(s)	348, 381, 893, 974, 1187, 1370, 1502
MslI	CAYNNNNRTG	1 cut(s)	1292
MspI	CCGG	3 cut(s)	54, 800, 1133
MspR9I	CCNGG	4 cut(s)	594, 791, 1134, 1571
Mva1269I	GAATGC	2 cut(s)	57, 582
MvaI	CCWGG	3 cut(s)	594, 791, 1571
MwoI	GCNNNNNNNGC	7 cut(s)	54, 95, 145, 193, 252, 286, 926
NaeI	GCCGGC	1 cut(s)	55
NciI	CCSGG	1 cut(s)	1134
NgoMIV	GCCGGC	1 cut(s)	53
NlaIV	GGNNCC	4 cut(s)	487, 591, 1030, 1576
NmeAIII	GCCGAG	1 cut(s)	107
NmuCI	GTSAC	1 cut(s)	1219
NsiI	ATGCAT	1 cut(s)	84
NspI	RCATGY	4 cut(s)	82, 1018, 1119, 1474
NspV	TTCGAA	1 cut(s)	574
PaeR7I	CTCGAG	2 cut(s)	157, 1248
PagI	TCATGA	2 cut(s)	1435, 1510
PaqCI	CACCTGC	1 cut(s)	373
PctI	GAATGC	2 cut(s)	57, 582
PdiI	GCCGGC	1 cut(s)	55
PdmI	GAANNNNTTC	1 cut(s)	948
PfeI	GAWTC	2 cut(s)	15, 421
PflFI	GACNNNGTC	2 cut(s)	594, 1217
PkrI	GCNGC	1 cut(s)	919
Ple19I	CGATCG	1 cut(s)	1084
PleI	GAGTC	3 cut(s)	1319, 1501, 1552
PpsI	GAGTC	3 cut(s)	1319, 1501, 1552
PpuMI	RGGWCCY	1 cut(s)	590
PshBI	ATTAAT	2 cut(s)	893, 1370
PsiI	TTATAA	1 cut(s)	1479
Psp124BI	GAGCTC	3 cut(s)	91, 150, 189
Psp5II	RGGWCCY	1 cut(s)	590
Psp6I	CCWGG	3 cut(s)	592, 789, 1569
PspFI	CCCAGC	1 cut(s)	849
PspGI	CCWGG	3 cut(s)	592, 789, 1569
PspN4I	GGNNCC	4 cut(s)	487, 591, 1030, 1576
PspPI	GGNCC	2 cut(s)	590, 760
PspPPI	RGGWCCY	1 cut(s)	590
PspXI	VCTCGAGB	2 cut(s)	157, 1248
PstNI	CAGNNNCTG	1 cut(s)	823
PsuI	RGATCY	2 cut(s)	335, 1532
PsyI	GACNNNGTC	2 cut(s)	594, 1217
PvuI	CGATCG	1 cut(s)	1084
RsaI	GTAC	8 cut(s)	328, 344, 701, 809, 1043, 1107, 1208, 1402
RsaNI	GTAC	8 cut(s)	327, 343, 700, 808, 1042, 1106, 1207, 1401
RseI	CAYNNNNRTG	1 cut(s)	1292
SacI	GAGCTC	3 cut(s)	91, 150, 189
SaqAI	TTAA	7 cut(s)	348, 381, 893, 974, 1187, 1370, 1502
SatI	GCNGC	1 cut(s)	918
Sau96I	GGNCC	2 cut(s)	590, 760
ScaI	AGTACT	1 cut(s)	1107
SchI	GAGTC	3 cut(s)	1319, 1501, 1553
ScrFI	CCNGG	4 cut(s)	594, 791, 1134, 1571
SduI	GDGCHC	6 cut(s)	91, 150, 189, 432, 1195, 1579
SexAI	ACCWGGT	1 cut(s)	592
SfaNI	GCATC	4 cut(s)	57, 91, 126, 511
Sfr274I	CTCGAG	2 cut(s)	157, 1248
SfuI	TTCGAA	1 cut(s)	574
SinI	GGWCC	1 cut(s)	590
SlaI	CTCGAG	2 cut(s)	157, 1248
SmiMI	CAYNNNNRTG	1 cut(s)	1292
SmlI	CTYRAG	3 cut(s)	157, 453, 1248
SmoI	CTYRAG	3 cut(s)	157, 453, 1248
Sse9I	AATT	8 cut(s)	544, 890, 910, 944, 971, 1240, 1367, 1447
SspMI	CTAG	2 cut(s)	644, 1088
SstI	GAGCTC	3 cut(s)	91, 150, 189
StyD4I	CCNGG	4 cut(s)	592, 789, 1132, 1569
TaaI	ACNGT	6 cut(s)	331, 514, 712, 746, 865, 880
TaiI	ACGT	2 cut(s)	378, 1047
TaqI	TCGA	8 cut(s)	18, 85, 158, 204, 260, 574, 957, 1249
TasI	AATT	8 cut(s)	544, 890, 910, 944, 971, 1240, 1367, 1447
TatI	WGTACW	4 cut(s)	342, 699, 1105, 1206
TfiI	GAWTC	2 cut(s)	15, 421
Tru1I	TTAA	7 cut(s)	348, 381, 893, 974, 1187, 1370, 1502
Tru9I	TTAA	7 cut(s)	348, 381, 893, 974, 1187, 1370, 1502
TscAI	CASTG	6 cut(s)	517, 715, 828, 870, 885, 1345
TseFI	GTSAC	1 cut(s)	1219
TseI	GCWGC	1 cut(s)	917
Tsp45I	GTSAC	1 cut(s)	1219
TspDTI	ATGAA	6 cut(s)	510, 572, 630, 1064, 1331, 1424
TspGWI	ACGGA	3 cut(s)	27, 533, 1058
TspRI	CASTG	6 cut(s)	517, 715, 828, 870, 885, 1345
Tth111I	GACNNNGTC	2 cut(s)	594, 1217
VpaK11BI	GGWCC	1 cut(s)	590
VspI	ATTAAT	2 cut(s)	893, 1370
XagI	CCTNNNNNAGG	1 cut(s)	788
XapI	RAATTY	3 cut(s)	544, 944, 1447
XbaI	TCTAGA	1 cut(s)	1087
XceI	RCATGY	4 cut(s)	82, 1018, 1119, 1474
XhoI	CTCGAG	2 cut(s)	157, 1248
XmnI	GAANNNNTTC	1 cut(s)	948
XspI	CTAG	2 cut(s)	644, 1088
ZrmI	AGTACT	1 cut(s)	1107
Zsp2I	ATGCAT	1 cut(s)	84

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.