Rmu_sc0006420.1_g000047

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006420.1
OG0014776
Physical Location & Seq
Forward (+)
192087 .. 195844
3758 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2592 bp
ctgtattggcctccacaattacaaaatgacattgcaccaagtcaaggtggtggtggtgtagcctctccatctgtatcacatgggaatgaggtttccgaagattcaacggtccgcatttccaagaaactttcgtctcctgatcatacccagaacagcttatcagttggaacgcagagttctgatgactgttcaaagataagcaaacaagggtctgatgaattaagcagtactagtgttgttgaggatgttgtagttcagtgtaacaaacaggttgaacttgaagattccaataatcgaagccacacaggttgcacttacaatggaaaagaaaataggcattttggttggaacaggaggcagtacaatgccagggaaggacatgtgaattgggggaagaaaccaagttacagaaatggtgtgaaagatattaacccagcagagaatcgttttgcagctgagcgtagctcattagctaatgatggtatcttaccttatccattgatgtcatctggatacaacaatggaaaagaaaataggcatattggttggaacaggaagcagtacaatgctagggaaggacatgtgaattgggggaagaaaccaagttacagaaatggtgtgaaagatgtcaacctggcagagaatcgtttttggtctgagcggaattcattagccaatgatgccatctcacctaatccgtcgaattcctctggacacaaaaatgctgcttatggatatagaaaaagggatacccctccaagactattgaatgaatcatcacagggggctgcttctccacagaggttgaatgggacactttttgtttcagtaaaaagtcaaacggaaggctcggaaagtgactctgaaaaattagtaggaagatcacctaattcaattaagcctgtgaattgcaatatgaaaaaaggaccccgcaattatgaagcagtcttctctgagttacacggtaagtgtaaacaattgtcaatgggttgttttgatatgcacgattacaagagagatgctgcaggaacaaatggcaagcagattgcaagtcatggtgatcgacactgtataacctcaccttccatgtattctaaaatgtctactcagggagtgatgaatggtattcaacaacacaaattcaggaagataccaagcatggaacatgagtttggtaagttggtacatgtatccttggacggtataccatgctttcatactgatcataaacttgagaaagatacttctggagcaaatattatggagcagacagctgttggtacaaaagagttcaggccagtggacagaatttcatctgccagtatctccaatgagttcaatctcttaccagatttaagcagggagttaaataatagccatctgggaggaaacgcaatatcctgcaatcaactgatttcttatgatgatccaaaggtttatcagtctactgctgaaataggtaaaaaaatagaaagaaaaggttatgatgcaaagaatagaggactaaaggaccctgaccaatttctaattggttcaaatatgggaatgaaagctctaaatgctgcttaccaaatgcaattagcatctgaaactgttcagctcgcaatgggttgcccacttgcagagtttgaaacattcatccactgcgctgttcctgttattccttcttcgtctgtacataaagaatattctgtttccttgggtactcagccatctcacagtttactatccaaggaccagataccaaatgtatcacttcacagtgtttggaactggtatgagataccagggaattatgggttggatgtcaaggcagtttgtcctaaaaccctcactggccttccaaatgattcaatgtcattccaagcctattttgttccttccctttctgctattcaattgtttggaccacacatccctggttgcaaaagatcattttccaattcttcagaagcagtacatctcaaccatattcgggttggttcatttgatgttgccctacatgatggaagttgtgttcaaagtctggattgttcacctgtcttctcctctgatgctgagctcatatttgagttttttgaggttgaactgccacaccaccggaggtctttttacaacaaaattctggagctaattggtgctggaacttctaatcctcaagtatttggtgacccatcaaagctcactagtctgaatttgcctgatttacatcctgcatcctggttttcggtggcttggtatcctatatatcaaattccagaagggcacctacgcgcatcattcttgacttaccattcacttggacattttgttcagagacctggttcaactgttgctccaggttgcattttcttccctgtgttaggcttgcaaagctacaattctcaggatgaatgctggtttgaacccaaaataccttcttcagaaccgacatcttttgacaccacaggaattctcataaaaaggctcaggacgttggacgaaaatgctttacatttcgctagaggctgggtttacaaggacaaagtcatggtgcagaacagacatccagattacgagttcttcacttcccgaaaaacacgttacaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

863

Amino Acids

95.97

Weight (kDa)

8.29

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 541 - 855 5.3e-56 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014776)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44320
malus_domestica MD17G1087100.v1.1
prunus_persica Prupe.3G227600_v2.0.a1 Prupe.3G227600_v2.0.a1
pyrus_communis pycom09g02250 pycom17g08430
rosa_chinensis RchiOBHm_Chr2g0161201
rosa_laevigata RLG00000021267
rosa_multiflora Rmu_sc0006420.1_g000047
rosa_roxburghii Rroxscaffold_2G00089030
rosa_rugosa Rorug02G0487000 Rorug02G0487100
rosa_samantha Rh2AG553800 Rh2BG567300 Rh2CG537600 Rh2DG576700
rosa_wichuraiana Rw2G045810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2265
AccBSI CCGCTC 1 cut(s) 661
AccI GTMKAC 3 cut(s) 1103, 1204, 1445
AccII CGCG 1 cut(s) 2274
AciI CCGC 3 cut(s) 112, 661, 931
AclWI GGATC 1 cut(s) 1421
AcsI RAATTY 8 cut(s) 664, 703, 1139, 1308, 2121, 2194, 2253, 2451
AcuI CTGAAG 2 cut(s) 1932, 2406
AfaI GTAC 8 cut(s) 229, 362, 563, 1185, 1282, 1677, 1705, 1959
AfiI CCNNNNNNNGG 3 cut(s) 44, 1975, 2363
AflIII ACRYGT 4 cut(s) 379, 580, 1186, 2579
AhlI ACTAGT 2 cut(s) 230, 2186
AjnI CCWGG 7 cut(s) 368, 633, 1786, 1918, 2219, 2320, 2338
AjuI GAANNNNNNNTTGG 4 cut(s) 1155, 1187, 1784, 1816
AloI GAACNNNNNNTCC 6 cut(s) 2001, 2033, 2137, 2169, 2295, 2327
Alw21I GWGCWC 1 cut(s) 2064
Alw26I GTCTC 2 cut(s) 138, 2311
AlwI GGATC 1 cut(s) 1421
AoxI GGCC 3 cut(s) 8, 1295, 1837
ApeKI GCWGC 5 cut(s) 452, 725, 788, 1022, 1562
ApoI RAATTY 8 cut(s) 664, 703, 1139, 1308, 2121, 2194, 2253, 2451
Asp700I GAANNNNTTC 1 cut(s) 1593
AspLEI GCGC 2 cut(s) 1649, 2276
AspS9I GGNCC 5 cut(s) 109, 926, 1510, 1735, 1907
AsuHPI GGTGA 6 cut(s) 681, 876, 1070, 1071, 2028, 2180
AvaII GGWCC 5 cut(s) 109, 926, 1510, 1735, 1907
BaeGI GKGCMC 1 cut(s) 2268
BanI GGYRCC 1 cut(s) 2265
BanII GRGCYC 1 cut(s) 2064
BarI GAAGNNNNNNTAC 2 cut(s) 2253, 2285
BbsI GAAGAC 2 cut(s) 940, 2035
Bbv12I GWGCWC 1 cut(s) 2064
BbvI GCAGC 5 cut(s) 464, 712, 775, 1009, 1549
BccI CCATC 7 cut(s) 76, 473, 692, 1386, 1720, 2000, 2182
BciT130I CCWGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
BciVI GTATCC 4 cut(s) 506, 742, 1201, 2250
BclI TGATCA 2 cut(s) 139, 1222
BcoDI GTCTC 2 cut(s) 138, 2311
BcuI ACTAGT 2 cut(s) 230, 2186
BfaI CTAG 4 cut(s) 231, 570, 2187, 2502
BfmI CTRYAG 1 cut(s) 1023
BfuI GTATCC 4 cut(s) 506, 742, 1201, 2250
BisI GCNGC 5 cut(s) 453, 726, 789, 1023, 1563
BlpI GCTNAGC 2 cut(s) 456, 2058
BlsI GCNGC 5 cut(s) 454, 727, 790, 1024, 1564
BmcAI AGTACT 1 cut(s) 229
Bme1390I CCNGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
Bme18I GGWCC 5 cut(s) 109, 926, 1510, 1735, 1907
BmgT120I GGNCC 5 cut(s) 109, 926, 1510, 1735, 1907
BmiI GGNNCC 3 cut(s) 928, 1512, 2267
BmrFI CCNGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
BmsI GCATC 7 cut(s) 670, 1009, 1477, 1592, 2044, 2225, 2285
BpiI GAAGAC 2 cut(s) 940, 2035
BplI GAGNNNNNCTC 2 cut(s) 449, 481
BpmI CTGGAG 3 cut(s) 1269, 2147, 2322
Bpu10I CCTNAGC 1 cut(s) 2468
Bpu1102I GCTNAGC 2 cut(s) 456, 2058
BpuEI CTTGAG 2 cut(s) 1253, 2142
BsaBI GATNNNNATC 1 cut(s) 2208
BsaI GGTCTC 1 cut(s) 2311
BsaJI CCNNGG 6 cut(s) 369, 1194, 1698, 1731, 1787, 1918
BsaWI WCCGGW 1 cut(s) 2100
BsaXI ACNNNNNCTCC 2 cut(s) 2320, 2350
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 1975, 2363
Bse1I ACTGG 4 cut(s) 1298, 1320, 1778, 1840
Bse3DI GCAATG 2 cut(s) 30, 1611
Bse8I GATNNNNATC 1 cut(s) 2208
BseBI CCWGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
BseDI CCNNGG 6 cut(s) 369, 1194, 1698, 1731, 1787, 1918
BseGI GGATG 8 cut(s) 250, 1638, 1810, 1914, 2209, 2216, 2395, 2545
BseJI GATNNNNATC 1 cut(s) 2208
BseLI CCNNNNNNNGG 3 cut(s) 44, 1975, 2363
BseMI GCAATG 2 cut(s) 30, 1611
BseMII CTCAG 8 cut(s) 447, 648, 945, 1121, 1721, 2049, 2399, 2482
BseNI ACTGG 4 cut(s) 1298, 1320, 1778, 1840
BseRI GAGGAG 1 cut(s) 2038
BseSI GKGCMC 1 cut(s) 2268
BseXI GCAGC 5 cut(s) 464, 712, 775, 1009, 1549
BseYI CCCAGC 2 cut(s) 433, 2508
BsgI GTGCAG 1 cut(s) 2555
Bsh1236I CGCG 1 cut(s) 2274
BshFI GGCC 3 cut(s) 10, 1297, 1839
BshNI GGYRCC 1 cut(s) 2265
BsiHKAI GWGCWC 1 cut(s) 2064
BsiSI CCGG 1 cut(s) 2101
BslFI GGGAC 1 cut(s) 826
BslI CCNNNNNNNGG 3 cut(s) 44, 1975, 2363
BsmAI GTCTC 2 cut(s) 138, 2311
BsmBI CGTCTC 1 cut(s) 138
BsmFI GGGAC 1 cut(s) 826
BsmI GAATGC 1 cut(s) 2399
BsnI GGCC 3 cut(s) 10, 1297, 1839
Bso31I GGTCTC 1 cut(s) 2311
Bsp1286I GDGCHC 2 cut(s) 2064, 2268
Bsp1407I TGTACA 1 cut(s) 1675
Bsp143I GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
Bsp1720I GCTNAGC 2 cut(s) 456, 2058
BspACI CCGC 3 cut(s) 112, 661, 931
BspANI GGCC 3 cut(s) 10, 1297, 1839
BspCNI CTCAG 8 cut(s) 448, 649, 946, 1120, 1720, 2050, 2398, 2481
BspFNI CGCG 1 cut(s) 2274
BspLI GGNNCC 3 cut(s) 928, 1512, 2267
BspMAI CTGCAG 1 cut(s) 1027
BspPI GGATC 1 cut(s) 1421
BspT107I GGYRCC 1 cut(s) 2265
BspTNI GGTCTC 1 cut(s) 2311
BsrBI CCGCTC 1 cut(s) 661
BsrDI GCAATG 2 cut(s) 30, 1611
BsrGI TGTACA 1 cut(s) 1675
BsrI ACTGG 4 cut(s) 1298, 1320, 1778, 1840
BssECI CCNNGG 6 cut(s) 369, 1194, 1698, 1731, 1787, 1918
BssMI GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
BssNAI GTATAC 1 cut(s) 1205
BssT1I CCWWGG 3 cut(s) 1194, 1698, 1731
Bst1107I GTATAC 1 cut(s) 1205
Bst2UI CCWGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
Bst4CI ACNGT 9 cut(s) 109, 188, 965, 1070, 1202, 1594, 1721, 1763, 2332
BstAUI TGTACA 1 cut(s) 1675
BstC8I GCNNGC 3 cut(s) 1040, 1602, 2369
BstDEI CTNAG 8 cut(s) 456, 657, 954, 1107, 1707, 2058, 2385, 2468
BstEII GGTNACC 1 cut(s) 2168
BstENI CCTNNNNNAGG 1 cut(s) 2361
BstF5I GGATG 8 cut(s) 250, 1638, 1810, 1914, 2209, 2216, 2395, 2545
BstFNI CGCG 1 cut(s) 2274
BstHHI GCGC 2 cut(s) 1649, 2276
BstKTI GATC 6 cut(s) 142, 884, 1063, 1225, 1429, 1934
BstMAI GTCTC 2 cut(s) 138, 2311
BstMBI GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
BstMWI GCNNNNNNNGC 3 cut(s) 680, 1559, 2373
BstNI CCWGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
BstNSI RCATGY 3 cut(s) 383, 584, 1190
BstPI GGTNACC 1 cut(s) 2168
BstSCI CCNGG 7 cut(s) 368, 633, 1786, 1918, 2219, 2320, 2338
BstSFI CTRYAG 1 cut(s) 1023
BstSLI GKGCMC 1 cut(s) 2268
BstUI CGCG 1 cut(s) 2274
BstV1I GCAGC 5 cut(s) 464, 712, 775, 1009, 1549
BstV2I GAAGAC 2 cut(s) 940, 2035
BstXI CCANNNNNNTGG 1 cut(s) 2300
BstZ17I GTATAC 1 cut(s) 1205
BsuI GTATCC 4 cut(s) 506, 742, 1201, 2250
BsuRI GGCC 3 cut(s) 10, 1297, 1839
BtsCI GGATG 8 cut(s) 250, 1638, 1810, 1914, 2209, 2216, 2395, 2545
BtsI GCAGTG 1 cut(s) 1642
BtsIMutI CAGTG 6 cut(s) 263, 1066, 1305, 1642, 1768, 1833
Cac8I GCNNGC 3 cut(s) 1040, 1602, 2369
CfoI GCGC 2 cut(s) 1649, 2276
Cfr13I GGNCC 5 cut(s) 109, 926, 1510, 1735, 1907
CpoI CGGWCCG 1 cut(s) 109
CsiI ACCWGGT 1 cut(s) 2320
Csp6I GTAC 8 cut(s) 228, 361, 562, 1184, 1281, 1676, 1704, 1958
CspCI CAANNNNNGTGG 4 cut(s) 290, 325, 786, 821
CspI CGGWCCG 1 cut(s) 109
CviQI GTAC 8 cut(s) 228, 361, 562, 1184, 1281, 1676, 1704, 1958
DdeI CTNAG 8 cut(s) 456, 657, 954, 1107, 1707, 2058, 2385, 2468
DpnI GATC 6 cut(s) 141, 883, 1062, 1224, 1428, 1933
DpnII GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
Ecl136II GAGCTC 1 cut(s) 2062
Eco130I CCWWGG 3 cut(s) 1194, 1698, 1731
Eco24I GRGCYC 1 cut(s) 2064
Eco31I GGTCTC 1 cut(s) 2311
Eco47I GGWCC 5 cut(s) 109, 926, 1510, 1735, 1907
Eco53kI GAGCTC 1 cut(s) 2062
Eco57I CTGAAG 2 cut(s) 1932, 2406
Eco91I GGTNACC 1 cut(s) 2168
EcoICRI GAGCTC 1 cut(s) 2062
EcoNI CCTNNNNNAGG 1 cut(s) 2361
EcoO109I RGGNCCY 2 cut(s) 926, 1510
EcoO65I GGTNACC 1 cut(s) 2168
EcoRI GAATTC 3 cut(s) 664, 703, 2451
EcoRII CCWGG 7 cut(s) 368, 633, 1786, 1918, 2219, 2320, 2338
EcoT14I CCWWGG 3 cut(s) 1194, 1698, 1731
EcoT38I GRGCYC 1 cut(s) 2064
ErhI CCWWGG 3 cut(s) 1194, 1698, 1731
Esp3I CGTCTC 1 cut(s) 138
FaqI GGGAC 1 cut(s) 826
FauI CCCGC 1 cut(s) 938
FbaI TGATCA 2 cut(s) 139, 1222
FblI GTMKAC 3 cut(s) 1103, 1204, 1445
Fnu4HI GCNGC 5 cut(s) 453, 726, 789, 1023, 1563
FokI GGATG 8 cut(s) 257, 1625, 1817, 1901, 2196, 2203, 2402, 2532
FriOI GRGCYC 1 cut(s) 2064
Fsp4HI GCNGC 5 cut(s) 453, 726, 789, 1023, 1563
FspBI CTAG 4 cut(s) 231, 570, 2187, 2502
GlaI GCGC 2 cut(s) 1648, 2275
GluI GCNGC 5 cut(s) 453, 726, 789, 1023, 1563
GsaI CCCAGC 2 cut(s) 437, 2512
GsuI CTGGAG 3 cut(s) 1269, 2147, 2322
HaeIII GGCC 3 cut(s) 10, 1297, 1839
HapII CCGG 1 cut(s) 2101
HhaI GCGC 2 cut(s) 1649, 2276
Hin6I GCGC 2 cut(s) 1647, 2274
HinP1I GCGC 2 cut(s) 1647, 2274
HincII GTYRAC 1 cut(s) 631
HindII GTYRAC 1 cut(s) 631
HinfI GANTC 7 cut(s) 101, 284, 442, 643, 773, 860, 1850
HpaII CCGG 1 cut(s) 2101
HphI GGTGA 6 cut(s) 681, 876, 1070, 1071, 2028, 2180
Hpy166II GTNNAC 9 cut(s) 631, 974, 1104, 1205, 1303, 1446, 1724, 2036, 2515
Hpy8I GTNNAC 9 cut(s) 631, 974, 1104, 1205, 1303, 1446, 1724, 2036, 2515
Hpy99I CGWCG 1 cut(s) 703
HpyAV CCTTC 9 cut(s) 368, 569, 839, 1092, 1674, 1850, 1890, 2255, 2427
HpyCH4III ACNGT 9 cut(s) 109, 188, 965, 1070, 1202, 1594, 1721, 1763, 2332
HpyCH4IV ACGT 2 cut(s) 2474, 2581
HpyF10VI GCNNNNNNNGC 3 cut(s) 680, 1559, 2373
HpyF3I CTNAG 8 cut(s) 456, 657, 954, 1107, 1707, 2058, 2385, 2468
HpySE526I ACGT 2 cut(s) 2474, 2581
HspAI GCGC 2 cut(s) 1647, 2274
Ksp22I TGATCA 2 cut(s) 139, 1222
Kzo9I GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
LmnI GCTCC 4 cut(s) 1250, 1264, 2128, 2341
Lsp1109I GCAGC 5 cut(s) 464, 712, 775, 1009, 1549
LweI GCATC 7 cut(s) 670, 1009, 1477, 1592, 2044, 2225, 2285
MabI ACCWGGT 1 cut(s) 2320
MaeI CTAG 4 cut(s) 231, 570, 2187, 2502
MaeII ACGT 2 cut(s) 2474, 2581
MaeIII GTNAC 7 cut(s) 260, 404, 605, 857, 957, 2168, 2582
MalI GATC 6 cut(s) 141, 883, 1062, 1224, 1428, 1933
MbiI CCGCTC 1 cut(s) 661
MboI GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
MfeI CAATTG 2 cut(s) 977, 1898
MhlI GDGCHC 2 cut(s) 2064, 2268
MlyI GAGTC 1 cut(s) 854
MmeI TCCRAC 5 cut(s) 145, 326, 527, 1782, 2457
MroXI GAANNNNTTC 1 cut(s) 1593
MseI TTAA 5 cut(s) 221, 429, 897, 1355, 1367
MslI CAYNNNNRTG 2 cut(s) 84, 720
MspA1I CMGCKG 2 cut(s) 455, 1274
MspI CCGG 1 cut(s) 2101
MspR9I CCNGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
MunI CAATTG 2 cut(s) 977, 1898
Mva1269I GAATGC 1 cut(s) 2399
MvaI CCWGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
MvnI CGCG 1 cut(s) 2274
MwoI GCNNNNNNNGC 3 cut(s) 680, 1559, 2373
NdeII GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
NlaIV GGNNCC 3 cut(s) 928, 1512, 2267
NmuCI GTSAC 2 cut(s) 857, 2168
NspI RCATGY 3 cut(s) 383, 584, 1190
PciI ACATGT 3 cut(s) 379, 580, 1186
PctI GAATGC 1 cut(s) 2399
PdmI GAANNNNTTC 1 cut(s) 1593
PfeI GAWTC 6 cut(s) 101, 284, 442, 643, 773, 1850
PflFI GACNNNGTC 1 cut(s) 2525
PkrI GCNGC 5 cut(s) 454, 727, 790, 1024, 1564
PleI GAGTC 1 cut(s) 854
PpsI GAGTC 1 cut(s) 854
PpuMI RGGWCCY 2 cut(s) 926, 1510
PscI ACATGT 3 cut(s) 379, 580, 1186
Psp124BI GAGCTC 1 cut(s) 2064
Psp5II RGGWCCY 2 cut(s) 926, 1510
Psp6I CCWGG 7 cut(s) 368, 633, 1786, 1918, 2219, 2320, 2338
PspEI GGTNACC 1 cut(s) 2168
PspFI CCCAGC 2 cut(s) 433, 2508
PspGI CCWGG 7 cut(s) 368, 633, 1786, 1918, 2219, 2320, 2338
PspN4I GGNNCC 3 cut(s) 928, 1512, 2267
PspPI GGNCC 5 cut(s) 109, 926, 1510, 1735, 1907
PspPPI RGGWCCY 2 cut(s) 926, 1510
PsrI GAACNNNNNNTAC 2 cut(s) 2397, 2429
PstI CTGCAG 1 cut(s) 1027
PsyI GACNNNGTC 1 cut(s) 2525
PvuII CAGCTG 2 cut(s) 455, 1274
RsaI GTAC 8 cut(s) 229, 362, 563, 1185, 1282, 1677, 1705, 1959
RsaNI GTAC 8 cut(s) 228, 361, 562, 1184, 1281, 1676, 1704, 1958
RseI CAYNNNNRTG 2 cut(s) 84, 720
Rsr2I CGGWCCG 1 cut(s) 109
RsrII CGGWCCG 1 cut(s) 109
SacI GAGCTC 1 cut(s) 2064
SaqAI TTAA 5 cut(s) 221, 429, 897, 1355, 1367
SatI GCNGC 5 cut(s) 453, 726, 789, 1023, 1563
Sau3AI GATC 6 cut(s) 139, 881, 1060, 1222, 1426, 1931
Sau96I GGNCC 5 cut(s) 109, 926, 1510, 1735, 1907
ScaI AGTACT 1 cut(s) 229
SchI GAGTC 1 cut(s) 854
ScrFI CCNGG 7 cut(s) 370, 635, 1788, 1920, 2221, 2322, 2340
SduI GDGCHC 2 cut(s) 2064, 2268
SexAI ACCWGGT 1 cut(s) 2320
SfaNI GCATC 7 cut(s) 670, 1009, 1477, 1592, 2044, 2225, 2285
SfcI CTRYAG 1 cut(s) 1023
SinI GGWCC 5 cut(s) 109, 926, 1510, 1735, 1907
SmiMI CAYNNNNRTG 2 cut(s) 84, 720
SmlI CTYRAG 2 cut(s) 1232, 2157
SmoI CTYRAG 2 cut(s) 1232, 2157
SpeI ACTAGT 2 cut(s) 230, 2186
SsiI CCGC 3 cut(s) 112, 661, 931
SspI AATATT 2 cut(s) 1258, 1688
SspMI CTAG 4 cut(s) 231, 570, 2187, 2502
SstI GAGCTC 1 cut(s) 2064
StyD4I CCNGG 7 cut(s) 368, 633, 1786, 1918, 2219, 2320, 2338
StyI CCWWGG 3 cut(s) 1194, 1698, 1731
TaaI ACNGT 9 cut(s) 109, 188, 965, 1070, 1202, 1594, 1721, 1763, 2332
TaiI ACGT 2 cut(s) 2477, 2584
TaqI TCGA 3 cut(s) 295, 701, 1063
TatI WGTACW 5 cut(s) 227, 360, 561, 1675, 1957
TfiI GAWTC 6 cut(s) 101, 284, 442, 643, 773, 1850
Tru1I TTAA 5 cut(s) 221, 429, 897, 1355, 1367
Tru9I TTAA 5 cut(s) 221, 429, 897, 1355, 1367
TscAI CASTG 6 cut(s) 263, 1073, 1305, 1649, 1768, 1840
TseFI GTSAC 2 cut(s) 857, 2168
TseI GCWGC 5 cut(s) 452, 725, 788, 1022, 1562
Tsp45I GTSAC 2 cut(s) 857, 2168
TspGWI ACGGA 2 cut(s) 687, 857
TspRI CASTG 6 cut(s) 263, 1073, 1305, 1649, 1768, 1840
Tth111I GACNNNGTC 1 cut(s) 2525
VpaK11BI GGWCC 5 cut(s) 109, 926, 1510, 1735, 1907
XagI CCTNNNNNAGG 1 cut(s) 2361
XapI RAATTY 8 cut(s) 664, 703, 1139, 1308, 2121, 2194, 2253, 2451
XceI RCATGY 3 cut(s) 383, 584, 1190
XcmI CCANNNNNNNNNTGG 2 cut(s) 1526, 1976
XmiI GTMKAC 3 cut(s) 1103, 1204, 1445
XmnI GAANNNNTTC 1 cut(s) 1593
XspI CTAG 4 cut(s) 231, 570, 2187, 2502
ZrmI AGTACT 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.