Rmu_sc0006732.1_g000012

Haloacid dehalogenase-like hydrolase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006732.1
Physical Location & Seq
Forward (+)
71266 .. 73396
2131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006732.1_g000012.1.cds

Sequence Viewer

Length: 1338 bp
atggttgaatcattggcttcaacctctttcattgggcatagaccgctctttgccggagctttagttaaggatgtctccagcaagaggaggtctgtgaatattgtttggtttcctaaagcaaaatgtcttggtagaagggttattatgtctcctcctttgccgaggctgggagttgatcgctctaaaaattcatcgatcaatgcccttgcaatggagcttgcgcatgagacatattcattcaaggaggatagcattccccggaaatggaattatcctccggatacaggggtagatcaaactggtatagatcgaaggcctggtttgtggccaccggagaataaagcagatatcccttcactacataaccccttgcttcggcaagaacggatgggaagtggttggctagttgccatattcgagtgggaaggtgttctgattgaagacaaccctgaccttgagaagcaagcctggctggctctttgtgaagaagaaggtaaatctcctcccccagctttccttcttagaagaatagaaggtatgaagaatgagcaggcgatttctgaagttctctgctggtcaagagacccagcgcagatgagaagaatggctgctcgtaaggaagacatttaccaagctttgcaaggtggaatatatagattgcgagctggatcaagagagtttgtgaatgttttgatgcattacaagataccaatggcattggtctctacacgtcctaggaaaactcttgaggctgcagttgggaacattggtattgaagaatacttcaatgtgatgataggtgcagaagatgttcaaagggggaagcctgatcctgaaatgtttgtgtatgcggcacagcttctcaaattcatacctgagcggtgcattgtatttggtaactcaaatcaaacagtggaggctgcccatgatgcgcggatgaagtgtgtggctgttgctagcaagcatcctgtatatgagcttgcagctgcagacttggtggttaggcgcttggatgagctatctgtggttgatttgaaaaatcttgctgcggtagaatcagctgaatttggtgaagagccagagttggaactggaggaggaagaagaagatacatctccgtctaccagggtagcatttgatgataatttctgtcttacagctcaaacatggtttaaccctcttgacgggtcgatggcaattgcttcattcctggagaggctaagcttttcaagaatggactggttgctggttaccaatattgttaggcctgcgttccaatcagatagtcaagacatgtacactgagctggttaccaatattgttaggcctgcgttctaa

Protein Analysis

445

Amino Acids

50.22

Weight (kDa)

5.25

Isoelectric Point (pI)

56.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015417)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11570 AT4G11570
fragaria_vesca FvH4_5g02360
malus_domestica MD06G1082600.v1.1 MD14G1104100.v1.1
prunus_persica Prupe.5G099800_v2.0.a1
pyrus_communis pycom06g07960
rosa_chinensis RchiOBHm_Chr7g0197751
rosa_laevigata RLG00000003913
rosa_multiflora Rmu_sc0006732.1_g000012
rosa_roxburghii Rroxscaffold_3G00258250
rosa_rugosa Rorug07G0043000
rosa_samantha Rh7AG167200 Rh7CG175900 Rh7DG169000
rosa_wichuraiana Rw7G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 222
AccBSI CCGCTC 2 cut(s) 46, 880
AccI GTMKAC 1 cut(s) 1121
AccII CGCG 1 cut(s) 934
AccIII TCCGGA 1 cut(s) 277
AciI CCGC 5 cut(s) 44, 851, 880, 934, 1049
AclWI GGATC 2 cut(s) 676, 824
AcoI YGGCCR 1 cut(s) 326
AcsI RAATTY 3 cut(s) 187, 866, 1064
AcuI CTGAAG 1 cut(s) 582
AfaI GTAC 1 cut(s) 1298
AfiI CCNNNNNNNGG 7 cut(s) 84, 167, 211, 264, 284, 375, 1184
AflIII ACRYGT 2 cut(s) 728, 1293
AgsI TTSAA 9 cut(s) 8, 21, 241, 440, 776, 787, 815, 1036, 1230
AjiI CACGTC 1 cut(s) 731
AjnI CCWGG 4 cut(s) 316, 467, 1124, 1209
Alw26I GTCTC 5 cut(s) 79, 153, 221, 576, 727
AlwI GGATC 2 cut(s) 676, 824
Aor13HI TCCGGA 1 cut(s) 277
AoxI GGCC 4 cut(s) 314, 326, 1265, 1325
ApeKI GCWGC 6 cut(s) 608, 752, 920, 983, 986, 1046
ApoI RAATTY 3 cut(s) 187, 866, 1064
Asp700I GAANNNNTTC 2 cut(s) 429, 810
AspA2I CCTAGG 1 cut(s) 734
AspLEI GCGC 4 cut(s) 223, 592, 934, 1008
AsuC2I CCSGG 1 cut(s) 259
AsuHPI GGTGA 1 cut(s) 1082
AsuNHI GCTAGC 1 cut(s) 956
AvrII CCTAGG 1 cut(s) 734
BaeI ACNNNNGTAYC 2 cut(s) 273, 306
BalI TGGCCA 1 cut(s) 328
BbsI GAAGAC 2 cut(s) 447, 627
BbvI GCAGC 6 cut(s) 595, 739, 907, 973, 995, 1033
BccI CCATC 2 cut(s) 382, 1186
BciT130I CCWGG 4 cut(s) 318, 469, 1126, 1211
BciVI GTATCC 1 cut(s) 274
BcnI CCSGG 1 cut(s) 259
BcoDI GTCTC 5 cut(s) 79, 153, 221, 576, 727
BfaI CTAG 3 cut(s) 404, 735, 957
BfmI CTRYAG 2 cut(s) 753, 987
BfoI RGCGCY 1 cut(s) 1009
BfuI GTATCC 1 cut(s) 274
BglI GCCNNNNNGGC 1 cut(s) 473
BisI GCNGC 7 cut(s) 609, 753, 852, 921, 984, 987, 1047
BlnI CCTAGG 1 cut(s) 734
BlpI GCTNAGC 1 cut(s) 1220
BlsI GCNGC 7 cut(s) 610, 754, 853, 922, 985, 988, 1048
Bme1390I CCNGG 5 cut(s) 259, 318, 469, 1126, 1211
BmgBI CACGTC 1 cut(s) 731
BmrFI CCNGG 5 cut(s) 259, 318, 469, 1126, 1211
BmsI GCATC 3 cut(s) 684, 919, 973
BmtI GCTAGC 1 cut(s) 960
BpiI GAAGAC 2 cut(s) 447, 627
BpmI CTGGAG 3 cut(s) 61, 1112, 1232
Bpu10I CCTNAGC 1 cut(s) 876
Bpu1102I GCTNAGC 1 cut(s) 1220
BpuEI CTTGAG 2 cut(s) 476, 767
BpuMI CCSGG 1 cut(s) 259
Bsa29I ATCGAT 1 cut(s) 194
BsaI GGTCTC 2 cut(s) 576, 727
BsaJI CCNNGG 4 cut(s) 161, 257, 734, 1125
BsaWI WCCGGW 2 cut(s) 277, 331
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bsc4I CCNNNNNNNGG 7 cut(s) 84, 167, 211, 264, 284, 375, 1184
Bse1I ACTGG 3 cut(s) 304, 1095, 1244
Bse3DI GCAATG 1 cut(s) 216
BseAI TCCGGA 1 cut(s) 277
BseBI CCWGG 4 cut(s) 318, 469, 1126, 1211
BseCI ATCGAT 1 cut(s) 194
BseDI CCNNGG 4 cut(s) 161, 257, 734, 1125
BseGI GGATG 5 cut(s) 76, 393, 942, 964, 1018
BseLI CCNNNNNNNGG 7 cut(s) 84, 167, 211, 264, 284, 375, 1184
BseMI GCAATG 1 cut(s) 216
BseMII CTCAG 2 cut(s) 867, 1293
BseNI ACTGG 3 cut(s) 304, 1095, 1244
BseRI GAGGAG 4 cut(s) 100, 141, 492, 1109
BseXI GCAGC 6 cut(s) 595, 739, 907, 973, 995, 1033
BseYI CCCAGC 3 cut(s) 166, 508, 586
BsgI GTGCAG 1 cut(s) 822
Bsh1236I CGCG 1 cut(s) 934
BshFI GGCC 4 cut(s) 316, 328, 1267, 1327
BshVI ATCGAT 1 cut(s) 194
BsiSI CCGG 4 cut(s) 54, 259, 278, 332
BslI CCNNNNNNNGG 7 cut(s) 84, 167, 211, 264, 284, 375, 1184
BsmAI GTCTC 5 cut(s) 79, 153, 221, 576, 727
BsmI GAATGC 1 cut(s) 252
BsnI GGCC 4 cut(s) 316, 328, 1267, 1327
Bso31I GGTCTC 2 cut(s) 576, 727
Bsp13I TCCGGA 1 cut(s) 277
Bsp1407I TGTACA 1 cut(s) 1296
Bsp143I GATC 6 cut(s) 175, 195, 292, 307, 668, 829
Bsp1720I GCTNAGC 1 cut(s) 1220
BspACI CCGC 5 cut(s) 44, 851, 880, 934, 1049
BspANI GGCC 4 cut(s) 316, 328, 1267, 1327
BspCNI CTCAG 2 cut(s) 868, 1294
BspDI ATCGAT 1 cut(s) 194
BspEI TCCGGA 1 cut(s) 277
BspFNI CGCG 1 cut(s) 934
BspMAI CTGCAG 2 cut(s) 757, 991
BspOI GCTAGC 1 cut(s) 960
BspPI GGATC 2 cut(s) 676, 824
BspQI GCTCTTC 1 cut(s) 1068
BspTNI GGTCTC 2 cut(s) 576, 727
BsrBI CCGCTC 2 cut(s) 46, 880
BsrDI GCAATG 1 cut(s) 216
BsrGI TGTACA 1 cut(s) 1296
BsrI ACTGG 3 cut(s) 304, 1095, 1244
BssECI CCNNGG 4 cut(s) 161, 257, 734, 1125
BssMI GATC 6 cut(s) 175, 195, 292, 307, 668, 829
BssT1I CCWWGG 1 cut(s) 734
Bst2UI CCWGG 4 cut(s) 318, 469, 1126, 1211
Bst4CI ACNGT 1 cut(s) 913
Bst6I CTCTTC 1 cut(s) 1068
BstAUI TGTACA 1 cut(s) 1296
BstDEI CTNAG 4 cut(s) 521, 876, 1220, 1302
BstEII GGTNACC 2 cut(s) 1249, 1309
BstF5I GGATG 5 cut(s) 76, 393, 942, 964, 1018
BstFNI CGCG 1 cut(s) 934
BstH2I RGCGCY 1 cut(s) 1009
BstHHI GCGC 4 cut(s) 223, 592, 934, 1008
BstKTI GATC 6 cut(s) 178, 198, 295, 310, 671, 832
BstMAI GTCTC 5 cut(s) 79, 153, 221, 576, 727
BstMBI GATC 6 cut(s) 175, 195, 292, 307, 668, 829
BstMWI GCNNNNNNNGC 4 cut(s) 43, 469, 473, 929
BstNI CCWGG 4 cut(s) 318, 469, 1126, 1211
BstNSI RCATGY 1 cut(s) 1297
BstPI GGTNACC 2 cut(s) 1249, 1309
BstSCI CCNGG 5 cut(s) 257, 316, 467, 1124, 1209
BstSFI CTRYAG 2 cut(s) 753, 987
BstUI CGCG 1 cut(s) 934
BstV1I GCAGC 6 cut(s) 595, 739, 907, 973, 995, 1033
BstV2I GAAGAC 2 cut(s) 447, 627
Bsu15I ATCGAT 1 cut(s) 194
BsuI GTATCC 1 cut(s) 274
BsuRI GGCC 4 cut(s) 316, 328, 1267, 1327
BsuTUI ATCGAT 1 cut(s) 194
BtrI CACGTC 1 cut(s) 731
BtsCI GGATG 5 cut(s) 76, 393, 942, 964, 1018
BtsIMutI CAGTG 2 cut(s) 918, 1299
CfoI GCGC 4 cut(s) 223, 592, 934, 1008
ClaI ATCGAT 1 cut(s) 194
Csp6I GTAC 1 cut(s) 1297
CviAII CATG 4 cut(s) 224, 926, 1167, 1294
CviQI GTAC 1 cut(s) 1297
DdeI CTNAG 4 cut(s) 521, 876, 1220, 1302
DpnI GATC 6 cut(s) 177, 197, 294, 309, 670, 831
DpnII GATC 6 cut(s) 175, 195, 292, 307, 668, 829
EaeI YGGCCR 1 cut(s) 326
Eam1104I CTCTTC 1 cut(s) 1068
EarI CTCTTC 1 cut(s) 1068
Eco130I CCWWGG 1 cut(s) 734
Eco147I AGGCCT 3 cut(s) 316, 1267, 1327
Eco31I GGTCTC 2 cut(s) 576, 727
Eco32I GATATC 1 cut(s) 349
Eco57I CTGAAG 1 cut(s) 582
Eco91I GGTNACC 2 cut(s) 1249, 1309
EcoO65I GGTNACC 2 cut(s) 1249, 1309
EcoRII CCWGG 4 cut(s) 316, 467, 1124, 1209
EcoRV GATATC 1 cut(s) 349
EcoT14I CCWWGG 1 cut(s) 734
EcoT22I ATGCAT 1 cut(s) 699
ErhI CCWWGG 1 cut(s) 734
FaeI CATG 4 cut(s) 227, 929, 1170, 1297
FatI CATG 4 cut(s) 223, 925, 1166, 1293
FblI GTMKAC 1 cut(s) 1121
Fnu4HI GCNGC 7 cut(s) 609, 753, 852, 921, 984, 987, 1047
FokI GGATG 5 cut(s) 83, 400, 949, 951, 1025
Fsp4HI GCNGC 7 cut(s) 609, 753, 852, 921, 984, 987, 1047
FspBI CTAG 3 cut(s) 404, 735, 957
FspI TGCGCA 1 cut(s) 222
GlaI GCGC 4 cut(s) 222, 591, 933, 1007
GluI GCNGC 7 cut(s) 609, 753, 852, 921, 984, 987, 1047
GsaI CCCAGC 3 cut(s) 170, 512, 590
GsuI CTGGAG 3 cut(s) 61, 1112, 1232
HaeII RGCGCY 1 cut(s) 1009
HaeIII GGCC 4 cut(s) 316, 328, 1267, 1327
HapII CCGG 4 cut(s) 54, 259, 278, 332
HhaI GCGC 4 cut(s) 223, 592, 934, 1008
Hin1II CATG 4 cut(s) 227, 929, 1170, 1297
Hin6I GCGC 4 cut(s) 221, 590, 932, 1006
HinP1I GCGC 4 cut(s) 221, 590, 932, 1006
HindIII AAGCTT 2 cut(s) 633, 1222
HinfI GANTC 2 cut(s) 8, 1055
HpaII CCGG 4 cut(s) 54, 259, 278, 332
HphI GGTGA 1 cut(s) 1082
Hpy166II GTNNAC 2 cut(s) 1122, 1299
Hpy188I TCNGA 3 cut(s) 435, 562, 1282
Hpy188III TCNNGA 8 cut(s) 278, 579, 672, 746, 833, 1181, 1230, 1289
Hpy8I GTNNAC 2 cut(s) 1122, 1299
HpyAV CCTTC 7 cut(s) 129, 306, 363, 419, 485, 527, 527
HpyCH4III ACNGT 1 cut(s) 913
HpyCH4IV ACGT 1 cut(s) 730
HpyCH4V TGCA 8 cut(s) 209, 640, 697, 755, 803, 885, 983, 989
HpyF10VI GCNNNNNNNGC 4 cut(s) 43, 469, 473, 929
HpyF3I CTNAG 4 cut(s) 521, 876, 1220, 1302
HpySE526I ACGT 1 cut(s) 730
Hsp92II CATG 4 cut(s) 227, 929, 1170, 1297
HspAI GCGC 4 cut(s) 221, 590, 932, 1006
Kpn2I TCCGGA 1 cut(s) 277
Kzo9I GATC 6 cut(s) 175, 195, 292, 307, 668, 829
LguI GCTCTTC 1 cut(s) 1068
LmnI GCTCC 2 cut(s) 56, 214
Lsp1109I GCAGC 6 cut(s) 595, 739, 907, 973, 995, 1033
LweI GCATC 3 cut(s) 684, 919, 973
MaeI CTAG 3 cut(s) 404, 735, 957
MaeII ACGT 1 cut(s) 730
MaeIII GTNAC 3 cut(s) 896, 1249, 1309
MalI GATC 6 cut(s) 177, 197, 294, 309, 670, 831
MbiI CCGCTC 2 cut(s) 46, 880
MboI GATC 6 cut(s) 175, 195, 292, 307, 668, 829
MfeI CAATTG 1 cut(s) 1197
MlsI TGGCCA 1 cut(s) 328
MluCI AATT 6 cut(s) 187, 268, 866, 1064, 1144, 1197
MluNI TGGCCA 1 cut(s) 328
MmeI TCCRAC 1 cut(s) 1065
Mox20I TGGCCA 1 cut(s) 328
Mph1103I ATGCAT 1 cut(s) 699
MroI TCCGGA 1 cut(s) 277
MroXI GAANNNNTTC 2 cut(s) 429, 810
MscI TGGCCA 1 cut(s) 328
MseI TTAA 2 cut(s) 66, 1173
Msp20I TGGCCA 1 cut(s) 328
MspA1I CMGCKG 2 cut(s) 986, 1061
MspI CCGG 4 cut(s) 54, 259, 278, 332
MspR9I CCNGG 5 cut(s) 259, 318, 469, 1126, 1211
MunI CAATTG 1 cut(s) 1197
Mva1269I GAATGC 1 cut(s) 252
MvaI CCWGG 4 cut(s) 318, 469, 1126, 1211
MvnI CGCG 1 cut(s) 934
MwoI GCNNNNNNNGC 4 cut(s) 43, 469, 473, 929
NciI CCSGG 1 cut(s) 259
NdeII GATC 6 cut(s) 175, 195, 292, 307, 668, 829
NheI GCTAGC 1 cut(s) 956
NlaIII CATG 4 cut(s) 227, 929, 1170, 1297
NmeAIII GCCGAG 1 cut(s) 186
NsbI TGCGCA 1 cut(s) 222
NsiI ATGCAT 1 cut(s) 699
NspI RCATGY 1 cut(s) 1297
PceI AGGCCT 3 cut(s) 316, 1267, 1327
PciI ACATGT 1 cut(s) 1293
PciSI GCTCTTC 1 cut(s) 1068
PctI GAATGC 1 cut(s) 252
PdmI GAANNNNTTC 2 cut(s) 429, 810
PfeI GAWTC 2 cut(s) 8, 1055
PfoI TCCNGGA 1 cut(s) 1209
PkrI GCNGC 7 cut(s) 610, 754, 853, 922, 985, 988, 1048
PscI ACATGT 1 cut(s) 1293
Psp6I CCWGG 4 cut(s) 316, 467, 1124, 1209
PspEI GGTNACC 2 cut(s) 1249, 1309
PspFI CCCAGC 3 cut(s) 166, 508, 586
PspGI CCWGG 4 cut(s) 316, 467, 1124, 1209
PstI CTGCAG 2 cut(s) 757, 991
PvuII CAGCTG 2 cut(s) 986, 1061
RsaI GTAC 1 cut(s) 1298
RsaNI GTAC 1 cut(s) 1297
SapI GCTCTTC 1 cut(s) 1068
SaqAI TTAA 2 cut(s) 66, 1173
SatI GCNGC 7 cut(s) 609, 753, 852, 921, 984, 987, 1047
Sau3AI GATC 6 cut(s) 175, 195, 292, 307, 668, 829
ScrFI CCNGG 5 cut(s) 259, 318, 469, 1126, 1211
SfaNI GCATC 3 cut(s) 684, 919, 973
SfcI CTRYAG 2 cut(s) 753, 987
SmlI CTYRAG 2 cut(s) 455, 746
SmoI CTYRAG 2 cut(s) 455, 746
Sse9I AATT 6 cut(s) 187, 268, 866, 1064, 1144, 1197
SseBI AGGCCT 3 cut(s) 316, 1267, 1327
SsiI CCGC 5 cut(s) 44, 851, 880, 934, 1049
SspI AATATT 3 cut(s) 100, 1258, 1318
SspMI CTAG 3 cut(s) 404, 735, 957
StuI AGGCCT 3 cut(s) 316, 1267, 1327
StyD4I CCNGG 5 cut(s) 257, 316, 467, 1124, 1209
StyI CCWWGG 1 cut(s) 734
TaaI ACNGT 1 cut(s) 913
TaiI ACGT 1 cut(s) 733
TaqI TCGA 4 cut(s) 194, 310, 417, 1190
TasI AATT 6 cut(s) 187, 268, 866, 1064, 1144, 1197
TatI WGTACW 1 cut(s) 1296
TauI GCSGC 1 cut(s) 854
TfiI GAWTC 2 cut(s) 8, 1055
Tru1I TTAA 2 cut(s) 66, 1173
Tru9I TTAA 2 cut(s) 66, 1173
TscAI CASTG 2 cut(s) 918, 1306
TseI GCWGC 6 cut(s) 608, 752, 920, 983, 986, 1046
TspDTI ATGAA 7 cut(s) 19, 180, 225, 554, 859, 953, 1194
TspGWI ACGGA 2 cut(s) 400, 1107
TspRI CASTG 2 cut(s) 918, 1306
XapI RAATTY 3 cut(s) 187, 866, 1064
XceI RCATGY 1 cut(s) 1297
XmaJI CCTAGG 1 cut(s) 734
XmiI GTMKAC 1 cut(s) 1121
XmnI GAANNNNTTC 2 cut(s) 429, 810
XspI CTAG 3 cut(s) 404, 735, 957
Zsp2I ATGCAT 1 cut(s) 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.