Rmu_sc0006794.1_g000003

Monoglyceride

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006794.1
OG0012735
Physical Location & Seq
Reverse (-)
7540 .. 11395
3856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006794.1_g000003.1.cds

Sequence Viewer

Length: 1242 bp
atgaagattcttgtgaagagatatgttgaatgtcaagcctggtttctgatgcttattcttcttggtttttattgtgaatggcaacaacttgttcctgaccttgagcaagttcaagtctctctcaacagccgaatcagatctcaaagatggagcaggctattgatagagaagctttcaagtcatgagctgcttagccaaaagaggtcgcaggaatggaaacccagaagcagtttcaaatcaacctcggtaatctcatgccctttgaccctcatcaccaattcccctccactccatcctccagaaaagacttgctgcctaatacttgtttctgattacaattggcattctgttattgtcatgattaaacaccaactgaatttcaaaatcctccaaagaataaagagttctcggaagttcaggcccaagtgttgttccccaacaaagagaaagaagagcatagaagtaatggcaccccaagtgaggttgcaaggtgttgatgataaattgcagaagcttctggatactaacatggatgaagctccggccagaaggagagctcgtgaagcttttaaggacattcagcttaatattgatcatatgttattcaagacaccaactgatggactgaatataaaagagtcatatgaagtgaactccaggggagtggagatcttctccaagagttggcttccagagacatctcagcccaaagcactactgtgttactgtcatggttacggagatacttgcacatttttctttgaaggaattgcaaggaagttggcatcaatttccccaccgtggctgctagcacaagtcctaattggtgttgctaaattccttccaaagcagaagttggttccacaaaagaatctggctgaggcagcctttaaagacttgaagaaacgggaaatgacggcctataatgttgttgcttacaaggataagccacgcctgcagactgctgtagaaatgctccggacaactcaagagatagaaagtcgattagaagaagtctctcttccattattaatccttcacggagaagctgatactgtgaccgatccatctgtgagtagggcgctttatgagaaagcaagcagttccgacaagaagctaatcctttacgaggatgcatatcattcccttctggaaggtgagccggatgaaatgatagttcaagttttcaatgacatcatatcatggctcaacgaacacagcacaaaatttacagccagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923
Pfam Domains
Protein Families
Hydrolase_4

Protein Analysis

413

Amino Acids

47.69

Weight (kDa)

9.17

Isoelectric Point (pI)

49.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 469
AccB7I CCANNNNNTGG 2 cut(s) 620, 684
AccIII TCCGGA 1 cut(s) 978
AclWI GGATC 1 cut(s) 1058
AcoI YGGCCR 1 cut(s) 543
AcsI RAATTY 3 cut(s) 376, 836, 1226
AfiI CCNNNNNNNGG 5 cut(s) 480, 620, 684, 801, 1129
AjnI CCWGG 2 cut(s) 38, 656
AleI CACNNNNGTG 1 cut(s) 718
AluBI AGCT 9 cut(s) 172, 187, 514, 539, 557, 566, 583, 1049, 1117
AluI AGCT 9 cut(s) 172, 187, 514, 539, 557, 566, 583, 1049, 1117
Alw21I GWGCWC 1 cut(s) 559
Alw26I GTCTC 3 cut(s) 121, 689, 1021
AlwI GGATC 1 cut(s) 1058
Aor13HI TCCGGA 1 cut(s) 978
AoxI GGCC 3 cut(s) 419, 543, 918
ApeKI GCWGC 4 cut(s) 187, 312, 805, 884
ApoI RAATTY 3 cut(s) 376, 836, 1226
AseI ATTAAT 1 cut(s) 1031
AspLEI GCGC 1 cut(s) 1084
AspS9I GGNCC 1 cut(s) 420
AsuHPI GGTGA 2 cut(s) 265, 1169
AsuNHI GCTAGC 1 cut(s) 808
BanI GGYRCC 1 cut(s) 469
BanII GRGCYC 1 cut(s) 559
BauI CACGAG 1 cut(s) 558
Bbv12I GWGCWC 1 cut(s) 559
BbvCI CCTCAGC 1 cut(s) 879
BbvI GCAGC 4 cut(s) 174, 299, 792, 896
BccI CCATC 4 cut(s) 141, 300, 614, 1075
BceAI ACGGC 1 cut(s) 933
BciT130I CCWGG 2 cut(s) 40, 658
BciVI GTATCC 1 cut(s) 514
BclI TGATCA 1 cut(s) 592
BcoDI GTCTC 3 cut(s) 121, 689, 1021
BfaI CTAG 1 cut(s) 809
BfmI CTRYAG 2 cut(s) 956, 966
BfoI RGCGCY 1 cut(s) 1085
BfuI GTATCC 1 cut(s) 514
BglII AGATCT 2 cut(s) 137, 669
BisI GCNGC 4 cut(s) 188, 313, 806, 885
BlpI GCTNAGC 1 cut(s) 191
BlsI GCNGC 4 cut(s) 189, 314, 807, 886
Bme1390I CCNGG 2 cut(s) 40, 658
BmgT120I GGNCC 1 cut(s) 420
BmiI GGNNCC 2 cut(s) 471, 861
BmrFI CCNGG 2 cut(s) 40, 658
BmsI GCATC 3 cut(s) 39, 794, 1123
BmtI GCTAGC 1 cut(s) 812
BplI GAGNNNNNCTC 2 cut(s) 659, 691
BpmI CTGGAG 2 cut(s) 282, 640
Bpu10I CCTNAGC 1 cut(s) 879
Bpu1102I GCTNAGC 1 cut(s) 191
BpuEI CTTGAG 2 cut(s) 122, 972
BsaBI GATNNNNATC 1 cut(s) 1137
BsaJI CCNNGG 3 cut(s) 243, 657, 800
BsaWI WCCGGW 1 cut(s) 978
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bsc4I CCNNNNNNNGG 5 cut(s) 480, 620, 684, 801, 1129
Bse8I GATNNNNATC 1 cut(s) 1137
BseAI TCCGGA 1 cut(s) 978
BseBI CCWGG 2 cut(s) 40, 658
BseDI CCNNGG 3 cut(s) 243, 657, 800
BseGI GGATG 4 cut(s) 292, 538, 1138, 1171
BseJI GATNNNNATC 1 cut(s) 1137
BseLI CCNNNNNNNGG 5 cut(s) 480, 620, 684, 801, 1129
BseMII CTCAG 2 cut(s) 716, 870
BseXI GCAGC 4 cut(s) 174, 299, 792, 896
BshFI GGCC 3 cut(s) 421, 545, 920
BshNI GGYRCC 1 cut(s) 469
BsiHKAI GWGCWC 1 cut(s) 559
BsiSI CCGG 3 cut(s) 542, 979, 1163
BslI CCNNNNNNNGG 5 cut(s) 480, 620, 684, 801, 1129
BsmAI GTCTC 3 cut(s) 121, 689, 1021
BsmI GAATGC 1 cut(s) 343
BsnI GGCC 3 cut(s) 421, 545, 920
Bsp1286I GDGCHC 1 cut(s) 559
Bsp13I TCCGGA 1 cut(s) 978
Bsp143I GATC 4 cut(s) 137, 592, 669, 1063
Bsp1720I GCTNAGC 1 cut(s) 191
BspANI GGCC 3 cut(s) 421, 545, 920
BspCNI CTCAG 2 cut(s) 715, 871
BspEI TCCGGA 1 cut(s) 978
BspHI TCATGA 2 cut(s) 181, 357
BspLI GGNNCC 2 cut(s) 471, 861
BspMAI CTGCAG 1 cut(s) 960
BspOI GCTAGC 1 cut(s) 812
BspPI GGATC 1 cut(s) 1058
BspQI GCTCTTC 1 cut(s) 446
BspT107I GGYRCC 1 cut(s) 469
BssECI CCNNGG 3 cut(s) 243, 657, 800
BssMI GATC 4 cut(s) 137, 592, 669, 1063
BssSI CACGAG 1 cut(s) 558
Bst2BI CACGAG 1 cut(s) 558
Bst2UI CCWGG 2 cut(s) 40, 658
Bst4CI ACNGT 4 cut(s) 720, 728, 801, 1057
Bst6I CTCTTC 3 cut(s) 11, 446, 1026
BstC8I GCNNGC 4 cut(s) 155, 810, 956, 1099
BstDEI CTNAG 3 cut(s) 191, 702, 879
BstDSI CCRYGG 1 cut(s) 800
BstENI CCTNNNNNAGG 1 cut(s) 1127
BstF5I GGATG 4 cut(s) 292, 538, 1138, 1171
BstH2I RGCGCY 1 cut(s) 1085
BstHHI GCGC 1 cut(s) 1084
BstKTI GATC 4 cut(s) 140, 595, 672, 1066
BstMAI GTCTC 3 cut(s) 121, 689, 1021
BstMBI GATC 4 cut(s) 137, 592, 669, 1063
BstMWI GCNNNNNNNGC 3 cut(s) 563, 884, 955
BstNI CCWGG 2 cut(s) 40, 658
BstSCI CCNGG 2 cut(s) 38, 656
BstSFI CTRYAG 2 cut(s) 956, 966
BstV1I GCAGC 4 cut(s) 174, 299, 792, 896
BstX2I RGATCY 2 cut(s) 137, 669
BstXI CCANNNNNNTGG 1 cut(s) 664
BstYI RGATCY 2 cut(s) 137, 669
BsuI GTATCC 1 cut(s) 514
BsuRI GGCC 3 cut(s) 421, 545, 920
BtgI CCRYGG 1 cut(s) 800
BtsCI GGATG 4 cut(s) 292, 538, 1138, 1171
Cac8I GCNNGC 4 cut(s) 155, 810, 956, 1099
CciI TCATGA 2 cut(s) 181, 357
CfoI GCGC 1 cut(s) 1084
Cfr13I GGNCC 1 cut(s) 420
CviAII CATG 6 cut(s) 182, 255, 358, 529, 731, 1203
DdeI CTNAG 3 cut(s) 191, 702, 879
DpnI GATC 4 cut(s) 139, 594, 671, 1065
DpnII GATC 4 cut(s) 137, 592, 669, 1063
DraI TTTAAA 1 cut(s) 892
EaeI YGGCCR 1 cut(s) 543
Eam1104I CTCTTC 3 cut(s) 11, 446, 1026
EarI CTCTTC 3 cut(s) 11, 446, 1026
Ecl136II GAGCTC 1 cut(s) 557
Eco24I GRGCYC 1 cut(s) 559
Eco53kI GAGCTC 1 cut(s) 557
EcoICRI GAGCTC 1 cut(s) 557
EcoNI CCTNNNNNAGG 1 cut(s) 1127
EcoRII CCWGG 2 cut(s) 38, 656
EcoT22I ATGCAT 1 cut(s) 1138
EcoT38I GRGCYC 1 cut(s) 559
FaeI CATG 6 cut(s) 185, 258, 361, 532, 734, 1206
FalI AAGNNNNNCTT 2 cut(s) 1005, 1037
FatI CATG 6 cut(s) 181, 254, 357, 528, 730, 1202
FauNDI CATATG 2 cut(s) 597, 643
FbaI TGATCA 1 cut(s) 592
Fnu4HI GCNGC 4 cut(s) 188, 313, 806, 885
FokI GGATG 4 cut(s) 279, 545, 1145, 1178
FriOI GRGCYC 1 cut(s) 559
Fsp4HI GCNGC 4 cut(s) 188, 313, 806, 885
FspBI CTAG 1 cut(s) 809
GlaI GCGC 1 cut(s) 1083
GluI GCNGC 4 cut(s) 188, 313, 806, 885
GsuI CTGGAG 2 cut(s) 282, 640
HaeII RGCGCY 1 cut(s) 1085
HaeIII GGCC 3 cut(s) 421, 545, 920
HapII CCGG 3 cut(s) 542, 979, 1163
HhaI GCGC 1 cut(s) 1084
Hin1II CATG 6 cut(s) 185, 258, 361, 532, 734, 1206
Hin6I GCGC 1 cut(s) 1082
HinP1I GCGC 1 cut(s) 1082
HindIII AAGCTT 3 cut(s) 170, 512, 564
HinfI GANTC 4 cut(s) 7, 132, 638, 871
HpaII CCGG 3 cut(s) 542, 979, 1163
HphI GGTGA 2 cut(s) 265, 1169
Hpy166II GTNNAC 1 cut(s) 652
Hpy188I TCNGA 5 cut(s) 48, 137, 331, 411, 1108
Hpy8I GTNNAC 1 cut(s) 652
HpyAV CCTTC 6 cut(s) 543, 758, 851, 1046, 1148, 1157
HpyCH4III ACNGT 4 cut(s) 720, 728, 801, 1057
HpyCH4V TGCA 6 cut(s) 487, 508, 750, 773, 958, 1136
HpyF10VI GCNNNNNNNGC 3 cut(s) 563, 884, 955
HpyF3I CTNAG 3 cut(s) 191, 702, 879
Hsp92II CATG 6 cut(s) 185, 258, 361, 532, 734, 1206
HspAI GCGC 1 cut(s) 1082
Kpn2I TCCGGA 1 cut(s) 978
Ksp22I TGATCA 1 cut(s) 592
Kzo9I GATC 4 cut(s) 137, 592, 669, 1063
LguI GCTCTTC 1 cut(s) 446
LmnI GCTCC 3 cut(s) 150, 544, 981
Lsp1109I GCAGC 4 cut(s) 174, 299, 792, 896
LweI GCATC 3 cut(s) 39, 794, 1123
MaeI CTAG 1 cut(s) 809
MaeIII GTNAC 3 cut(s) 722, 734, 1057
MalI GATC 4 cut(s) 139, 594, 671, 1065
MboI GATC 4 cut(s) 137, 592, 669, 1063
MboII GAAGA 8 cut(s) 16, 28, 50, 463, 664, 913, 1013, 1022
MfeI CAATTG 1 cut(s) 337
MflI RGATCY 2 cut(s) 137, 669
MhlI GDGCHC 1 cut(s) 559
MluCI AATT 9 cut(s) 277, 337, 376, 503, 768, 789, 822, 836, 1226
MlyI GAGTC 1 cut(s) 647
MmeI TCCRAC 1 cut(s) 1131
MnlI CCTC 9 cut(s) 195, 253, 278, 294, 306, 398, 474, 874, 1123
Mph1103I ATGCAT 1 cut(s) 1138
MroI TCCGGA 1 cut(s) 978
MseI TTAA 5 cut(s) 363, 570, 585, 891, 1031
MslI CAYNNNNRTG 1 cut(s) 718
MspI CCGG 3 cut(s) 542, 979, 1163
MspR9I CCNGG 2 cut(s) 40, 658
MunI CAATTG 1 cut(s) 337
Mva1269I GAATGC 1 cut(s) 343
MvaI CCWGG 2 cut(s) 40, 658
MwoI GCNNNNNNNGC 3 cut(s) 563, 884, 955
NdeI CATATG 2 cut(s) 597, 643
NdeII GATC 4 cut(s) 137, 592, 669, 1063
NheI GCTAGC 1 cut(s) 808
NlaIII CATG 6 cut(s) 185, 258, 361, 532, 734, 1206
NlaIV GGNNCC 2 cut(s) 471, 861
NmuCI GTSAC 1 cut(s) 1057
NsiI ATGCAT 1 cut(s) 1138
OliI CACNNNNGTG 1 cut(s) 718
PagI TCATGA 2 cut(s) 181, 357
PciSI GCTCTTC 1 cut(s) 446
PctI GAATGC 1 cut(s) 343
PfeI GAWTC 3 cut(s) 7, 132, 871
PflMI CCANNNNNTGG 2 cut(s) 620, 684
PkrI GCNGC 4 cut(s) 189, 314, 807, 886
PleI GAGTC 1 cut(s) 646
PpsI GAGTC 1 cut(s) 646
PshBI ATTAAT 1 cut(s) 1031
Psp124BI GAGCTC 1 cut(s) 559
Psp6I CCWGG 2 cut(s) 38, 656
PspGI CCWGG 2 cut(s) 38, 656
PspN4I GGNNCC 2 cut(s) 471, 861
PspPI GGNCC 1 cut(s) 420
PstI CTGCAG 1 cut(s) 960
PsuI RGATCY 2 cut(s) 137, 669
RseI CAYNNNNRTG 1 cut(s) 718
SacI GAGCTC 1 cut(s) 559
SapI GCTCTTC 1 cut(s) 446
SaqAI TTAA 5 cut(s) 363, 570, 585, 891, 1031
SatI GCNGC 4 cut(s) 188, 313, 806, 885
Sau3AI GATC 4 cut(s) 137, 592, 669, 1063
Sau96I GGNCC 1 cut(s) 420
SchI GAGTC 1 cut(s) 647
ScrFI CCNGG 2 cut(s) 40, 658
SduI GDGCHC 1 cut(s) 559
SfaNI GCATC 3 cut(s) 39, 794, 1123
SfcI CTRYAG 2 cut(s) 956, 966
SmiMI CAYNNNNRTG 1 cut(s) 718
SmlI CTYRAG 2 cut(s) 101, 987
SmoI CTYRAG 2 cut(s) 101, 987
Sse9I AATT 9 cut(s) 277, 337, 376, 503, 768, 789, 822, 836, 1226
SspI AATATT 1 cut(s) 589
SspMI CTAG 1 cut(s) 809
SstI GAGCTC 1 cut(s) 559
StyD4I CCNGG 2 cut(s) 38, 656
TaaI ACNGT 4 cut(s) 720, 728, 801, 1057
TaqI TCGA 1 cut(s) 1003
TaqII GACCGA 1 cut(s) 1076
TasI AATT 9 cut(s) 277, 337, 376, 503, 768, 789, 822, 836, 1226
TfiI GAWTC 3 cut(s) 7, 132, 871
Tru1I TTAA 5 cut(s) 363, 570, 585, 891, 1031
Tru9I TTAA 5 cut(s) 363, 570, 585, 891, 1031
TseFI GTSAC 1 cut(s) 1057
TseI GCWGC 4 cut(s) 187, 312, 805, 884
Tsp45I GTSAC 1 cut(s) 1057
TspDTI ATGAA 4 cut(s) 17, 549, 660, 1182
TspGWI ACGGA 2 cut(s) 753, 1056
Van91I CCANNNNNTGG 2 cut(s) 620, 684
VspI ATTAAT 1 cut(s) 1031
XagI CCTNNNNNAGG 1 cut(s) 1127
XapI RAATTY 3 cut(s) 376, 836, 1226
XspI CTAG 1 cut(s) 809
Zsp2I ATGCAT 1 cut(s) 1138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.