Rmu_sc0006801.1_g000009

serine-threonine kinase receptor-associated

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006801.1
Physical Location & Seq
Forward (+)
45704 .. 46213
510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006801.1_g000009.1.cds

Sequence Viewer

Length: 510 bp
atgaaaaagcatgatgcggttgctggatcagtcagggctgtaggatgcctatcccctcatacttttgtgagcacatacaataatatgactggtgttagattttgggattcaagatgtccgagttttttggctcacaaattggagactcgtgtagatgtacccaattgtgaagtgagtcgagatgaagccagtattacttctgctggtatccgtgttggtgtgcaagttttgacgcttgataataatcagtggactacgcaacattatctaataagctgtagaacagcttccctacacaagcatccatgtttcggaaatataattgctgcaggaggagatgatggttatgttcatttatacgatcataatcatgttgagattgattccaataatgttgctgaaagtcatcctattcaatgtgtgcgattttcgccaacagagagatattatgcatcaggacataaggatcaccagcctaagatgacaagagtgcgagacagtttgtggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

169

Amino Acids

18.99

Weight (kDa)

7.19

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0019030)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 17
AclWI GGATC 2 cut(s) 34, 474
AfaI GTAC 1 cut(s) 159
AfiI CCNNNNNNNGG 1 cut(s) 311
AgsI TTSAA 2 cut(s) 111, 416
AluBI AGCT 2 cut(s) 276, 287
AluI AGCT 2 cut(s) 276, 287
Alw21I GWGCWC 1 cut(s) 74
Alw26I GTCTC 2 cut(s) 137, 489
AlwI GGATC 2 cut(s) 34, 474
ApeKI GCWGC 1 cut(s) 326
Asp700I GAANNNNTTC 1 cut(s) 286
AsuHPI GGTGA 1 cut(s) 461
BarI GAAGNNNNNNTAC 2 cut(s) 271, 303
BauI CACGAG 1 cut(s) 147
Bbv12I GWGCWC 1 cut(s) 74
BbvI GCAGC 1 cut(s) 313
BccI CCATC 1 cut(s) 335
BciVI GTATCC 1 cut(s) 218
BcoDI GTCTC 2 cut(s) 137, 489
BfmI CTRYAG 3 cut(s) 39, 277, 327
BfuI GTATCC 1 cut(s) 218
BisI GCNGC 1 cut(s) 327
BlsI GCNGC 1 cut(s) 328
BmsI GCATC 4 cut(s) 4, 35, 310, 461
BsaBI GATNNNNATC 3 cut(s) 49, 243, 366
Bsc4I CCNNNNNNNGG 1 cut(s) 311
Bse1I ACTGG 2 cut(s) 94, 189
Bse8I GATNNNNATC 3 cut(s) 49, 243, 366
BseGI GGATG 3 cut(s) 50, 301, 406
BseJI GATNNNNATC 3 cut(s) 49, 243, 366
BseLI CCNNNNNNNGG 1 cut(s) 311
BseNI ACTGG 2 cut(s) 94, 189
BseRI GAGGAG 1 cut(s) 348
BseXI GCAGC 1 cut(s) 313
BsiHKAI GWGCWC 1 cut(s) 74
BslI CCNNNNNNNGG 1 cut(s) 311
BsmAI GTCTC 2 cut(s) 137, 489
Bsp1286I GDGCHC 1 cut(s) 74
Bsp143I GATC 3 cut(s) 26, 361, 466
BspACI CCGC 1 cut(s) 17
BspMAI CTGCAG 1 cut(s) 331
BspPI GGATC 2 cut(s) 34, 474
BsrI ACTGG 2 cut(s) 94, 189
BssMI GATC 3 cut(s) 26, 361, 466
BssSI CACGAG 1 cut(s) 147
Bst2BI CACGAG 1 cut(s) 147
Bst4CI ACNGT 1 cut(s) 500
BstDEI CTNAG 1 cut(s) 477
BstF5I GGATG 3 cut(s) 50, 301, 406
BstKTI GATC 3 cut(s) 29, 364, 469
BstMAI GTCTC 2 cut(s) 137, 489
BstMBI GATC 3 cut(s) 26, 361, 466
BstMWI GCNNNNNNNGC 1 cut(s) 430
BstSFI CTRYAG 3 cut(s) 39, 277, 327
BstV1I GCAGC 1 cut(s) 313
BsuI GTATCC 1 cut(s) 218
BtsCI GGATG 3 cut(s) 50, 301, 406
BtsIMutI CAGTG 1 cut(s) 254
CseI GACGC 1 cut(s) 241
Csp6I GTAC 1 cut(s) 158
CviAII CATG 3 cut(s) 11, 306, 371
CviJI RGCY 6 cut(s) 38, 131, 188, 276, 287, 475
CviKI_1 RGCY 6 cut(s) 38, 131, 188, 276, 287, 475
CviQI GTAC 1 cut(s) 158
DdeI CTNAG 1 cut(s) 477
DpnI GATC 3 cut(s) 28, 363, 468
DpnII GATC 3 cut(s) 26, 361, 466
EcoT22I ATGCAT 1 cut(s) 454
FaeI CATG 3 cut(s) 14, 309, 374
FatI CATG 3 cut(s) 10, 305, 370
Fnu4HI GCNGC 1 cut(s) 327
FokI GGATG 3 cut(s) 57, 288, 393
Fsp4HI GCNGC 1 cut(s) 327
GluI GCNGC 1 cut(s) 327
HgaI GACGC 1 cut(s) 241
Hin1II CATG 3 cut(s) 14, 309, 374
HinfI GANTC 4 cut(s) 107, 145, 175, 383
HphI GGTGA 1 cut(s) 461
Hpy166II GTNNAC 1 cut(s) 252
Hpy188I TCNGA 2 cut(s) 120, 314
Hpy188III TCNNGA 3 cut(s) 111, 179, 456
Hpy8I GTNNAC 1 cut(s) 252
HpyCH4III ACNGT 1 cut(s) 500
HpyCH4V TGCA 3 cut(s) 223, 329, 452
HpyF10VI GCNNNNNNNGC 1 cut(s) 430
HpyF3I CTNAG 1 cut(s) 477
Hsp92II CATG 3 cut(s) 14, 309, 374
Kzo9I GATC 3 cut(s) 26, 361, 466
LpnPI CCDG 8 cut(s) 9, 19, 75, 189, 202, 315, 441, 485
Lsp1109I GCAGC 1 cut(s) 313
LweI GCATC 4 cut(s) 4, 35, 310, 461
MalI GATC 3 cut(s) 28, 363, 468
MboI GATC 3 cut(s) 26, 361, 466
MfeI CAATTG 1 cut(s) 163
MhlI GDGCHC 1 cut(s) 74
MluCI AATT 3 cut(s) 137, 163, 321
MlyI GAGTC 2 cut(s) 139, 184
MnlI CCTC 2 cut(s) 66, 326
Mph1103I ATGCAT 1 cut(s) 454
MroXI GAANNNNTTC 1 cut(s) 286
MslI CAYNNNNRTG 1 cut(s) 369
MunI CAATTG 1 cut(s) 163
MwoI GCNNNNNNNGC 1 cut(s) 430
NdeII GATC 3 cut(s) 26, 361, 466
NlaIII CATG 3 cut(s) 14, 309, 374
NsiI ATGCAT 1 cut(s) 454
PdmI GAANNNNTTC 1 cut(s) 286
PfeI GAWTC 2 cut(s) 107, 383
PkrI GCNGC 1 cut(s) 328
PleI GAGTC 2 cut(s) 139, 183
PpsI GAGTC 2 cut(s) 139, 183
PstI CTGCAG 1 cut(s) 331
RsaI GTAC 1 cut(s) 159
RsaNI GTAC 1 cut(s) 158
RseI CAYNNNNRTG 1 cut(s) 369
SatI GCNGC 1 cut(s) 327
Sau3AI GATC 3 cut(s) 26, 361, 466
SchI GAGTC 2 cut(s) 139, 184
SduI GDGCHC 1 cut(s) 74
SetI ASST 2 cut(s) 278, 289
SfaNI GCATC 4 cut(s) 4, 35, 310, 461
SfcI CTRYAG 3 cut(s) 39, 277, 327
SmiMI CAYNNNNRTG 1 cut(s) 369
Sse9I AATT 3 cut(s) 137, 163, 321
SsiI CCGC 1 cut(s) 17
TaaI ACNGT 1 cut(s) 500
TaqI TCGA 1 cut(s) 178
TasI AATT 3 cut(s) 137, 163, 321
TfiI GAWTC 2 cut(s) 107, 383
TscAI CASTG 1 cut(s) 254
TseI GCWGC 1 cut(s) 326
TspDTI ATGAA 3 cut(s) 17, 198, 341
TspGWI ACGGA 1 cut(s) 200
TspRI CASTG 1 cut(s) 254
XmnI GAANNNNTTC 1 cut(s) 286
Zsp2I ATGCAT 1 cut(s) 454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.