Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006822.1

Orthogroup ID

OG0017485

Physical Location & Seq

Genomic Coordinates Reverse (-)

73931 .. 76243

Gene Structure 2313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

atgtctcgtcttcttcgtcgtctgtctttcttgctcctcctcctcctccacatcagctacgctgctgctgctgatgactcactcaaatttgagaacccaaagcttgccaaggcttacaccgccctccaagcctggaagtctgccatcttctcggacccattcaacttcacctcgaactggaacgggtcggaagtgtgctcctacatgggagtcttctgcaccgccctcccctcaatcgggcgtgttgtcgccggcattgacctcaaccacgctgacattgccggctacctgcctccagagctaggcctcctctccgacctcgctctcttccacatcaactccaaccgcttctgcggcgtcgtccccacaagctttcggcgactgaagctgctccatgagctggatctcagcaacaaccgctttgtggggaacttccccaaagtggtgctctccttgccttccctcaagtacttggatctccgttttaacgagttcgaaggctccgttccttcccagctcttcgacaaggatctcgatgccattttcctcaacgacaacaggttccgctttggcatccctcagaatctcggaaactcgccggtttcggtgctggtgttggccaacaataatcttgggggttgcattccaggtagcatcggcaacatgtggaagacgctcaacgagatcattctgttgaatgacaatctcaccggctgcttgcctccccagatcggccgcctacgcaatctcaccgtcttggatgtgagcttcaaccagcttcaaggccctctgccctccgcctccatagccaaaatgaagagcttggaggagctggacgtcgcccataatagattcaccggtgtaataccagccagcatttgccaattgccagccttgcacaacttcacctattccttcaactacttcaccggagaggctcctgcttgcactgcaactcctgtctctcacaatggtagcaagaactgcattcctggcaagttggatcaaagatctacaagggaatgtgcttccccagctgcacgtccagtggactgcagcaagctcaaatgcggaggtggtggcggtggcggtgggggtggccgcggcgggtctgtcacaaagccgcgccctcctcgggcttcaacacctccttcgcaaagaattcctgttcctaaagttgctcctcctccaccccctccgacttcaaagtcatcgccttccactagatcacatcctccaccgccaatatcaacatcaacatcacccccgccttcttcaccatcaccgaccaagtcaaagccgccttcacctcctccgccacctactgaaaaagtatcacccaggactcatcttcatgttcctccacccccacctacccaaaaggtatcaccaagtacccatctagctccacctccccccagttcgacccatttcaactattcgtccccaccactagtaccagtacctgcaccagctgtaccaccggtttaccatgcctccccgcctgatcatcactctcatatagtgcctccatcatccccgtcaccatcaccaccaagttatcgttcttatgcttcaccaccaccgccgccgcctccacaacagtctgttgagattccaactcctgccccaccatcaccacaacactactactcacctcatgtcccaccaacagaagctccaagtccaccccggtcaccgcctccgccacagtactcttcccatgtcccaactgcacctcctccacctccgcccccggccaatgaacattatacaaaagcaccaccaccttggcacactcccgagcattattccccacccaaaacagctgatagtccacctccgccccccgccaaggaacattatgcaaaagctccaccaccttattggcacactcccgagcatcattcgccacccaaaacagctgctagtccacctccgcccccgaccaatgagcattacacaaatgcaccaccaccttggcacacgcccgagcattattcaccacccaaaacagctgcaagtccacctccccctcccccatcagctcctatttcaccgaccgagccatcaccttcccatcctctgccgccgcccataggctgtatcattccagcaccaattctgccacctccaccaagccatcaccactcacctcctcaacaatggcatcatccaccaccaccatcatcgtcgcatcaacaacctcctccacatggtgagccccccaagtttgattacaaccctccgcttccaccagtgattggagtctcatatgcatctcctcctcctcctgcaattccttactactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0005198 GO:0005199 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0007275 GO:0008150 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016043 GO:0016049 GO:0022622 GO:0030054 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044464 GO:0048364 GO:0048468 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0055044 GO:0060560 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8

Protein Analysis

770

Amino Acids

82.37

Weight (kDa)

9.01

Isoelectric Point (pI)

89.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	107 - 164	1.5e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62440
fragaria_vesca	FvH4_4g00070
malus_domestica	MD04G1000500.v1.1
prunus_persica	Prupe.1G000500_v2.0.a1
rosa_laevigata	RLG00000010279
rosa_multiflora	Rmu_sc0006822.1_g000025
rosa_roxburghii	Rroxscaffold_5G00332680
rosa_rugosa	Rorug03G0296900
rosa_samantha	Rh4BG000400 Rh4CG000300 Rh4DG000400
rosa_wichuraiana	Rw4G000850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1207
AatII	GACGTC	1 cut(s)	840
Acc36I	ACCTGC	2 cut(s)	297, 1474
AccB7I	CCANNNNNTGG	2 cut(s)	400, 2264
AccII	CGCG	2 cut(s)	1104, 1126
AclWI	GGATC	4 cut(s)	411, 483, 537, 1011
AcoI	YGGCCR	4 cut(s)	618, 733, 1099, 1758
AcsI	RAATTY	2 cut(s)	86, 1161
AcuI	CTGAAG	1 cut(s)	404
AcyI	GRCGYC	2 cut(s)	357, 837
AdeI	CACNNNGTG	1 cut(s)	2219
AfaI	GTAC	6 cut(s)	470, 1396, 1458, 1464, 1479, 1715
AflIII	ACRYGT	1 cut(s)	663
AgeI	ACCGGT	2 cut(s)	857, 1483
AgsI	TTSAA	8 cut(s)	163, 697, 772, 782, 919, 1143, 1206, 1435
AhlI	ACTAGT	1 cut(s)	1453
AjiI	CACGTC	1 cut(s)	1043
AjnI	CCWGG	4 cut(s)	131, 646, 991, 1340
AjuI	GAANNNNNNNTTGG	2 cut(s)	1549, 1581
Alw21I	GWGCWC	2 cut(s)	200, 450
Alw26I	GTCTC	3 cut(s)	9, 967, 2275
AlwI	GGATC	4 cut(s)	411, 483, 537, 1011
AlwNI	CAGNNNCTG	1 cut(s)	1466
Ama87I	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
AoxI	GGCC	6 cut(s)	304, 618, 733, 784, 1099, 1758
ApeKI	GCWGC	9 cut(s)	62, 65, 68, 388, 714, 1037, 1056, 1925, 2018
ApoI	RAATTY	2 cut(s)	86, 1161
AsiGI	ACCGGT	2 cut(s)	857, 1483
AspLEI	GCGC	1 cut(s)	1128
AspS9I	GGNCC	2 cut(s)	154, 785
AsuC2I	CCSGG	2 cut(s)	1693, 1757
AsuII	TTCGAA	1 cut(s)	495
AvaI	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
AvaII	GGWCC	1 cut(s)	154
BalI	TGGCCA	1 cut(s)	620
BanII	GRGCYC	1 cut(s)	2226
BbsI	GAAGAC	3 cut(s)	2, 205, 677
Bbv12I	GWGCWC	2 cut(s)	200, 450
BbvI	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
BciT130I	CCWGG	4 cut(s)	133, 648, 993, 1342
BclI	TGATCA	1 cut(s)	1507
BcnI	CCSGG	2 cut(s)	1693, 1757
BcoDI	GTCTC	3 cut(s)	9, 967, 2275
BcuI	ACTAGT	1 cut(s)	1453
BfaI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
BfmI	CTRYAG	1 cut(s)	1054
BfuAI	ACCTGC	2 cut(s)	297, 1474
BglII	AGATCT	1 cut(s)	1010
BmcAI	AGTACT	2 cut(s)	470, 1715
Bme1390I	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
Bme18I	GGWCC	1 cut(s)	154
BmeT110I	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
BmgBI	CACGTC	1 cut(s)	1043
BmgT120I	GGNCC	2 cut(s)	154, 785
BmiI	GGNNCC	4 cut(s)	156, 502, 563, 939
BmrFI	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
BmrI	ACTGGG	1 cut(s)	1413
BmsI	GCATC	7 cut(s)	526, 582, 663, 1912, 2179, 2206, 2288
BmuI	ACTGGG	1 cut(s)	1413
BpiI	GAAGAC	3 cut(s)	2, 205, 677
BpmI	CTGGAG	1 cut(s)	279
Bpu14I	TTCGAA	1 cut(s)	495
BpuEI	CTTGAG	1 cut(s)	449
BpuMI	CCSGG	2 cut(s)	1693, 1757
BsaHI	GRCGYC	2 cut(s)	357, 837
BsaJI	CCNNGG	9 cut(s)	108, 1102, 1133, 1340, 1691, 1755, 1790, 1854, 1979
BsaWI	WCCGGW	3 cut(s)	857, 929, 1483
Bse118I	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
Bse1I	ACTGG	5 cut(s)	182, 1046, 1419, 1460, 2258
Bse3DI	GCAATG	1 cut(s)	276
BseBI	CCWGG	4 cut(s)	133, 648, 993, 1342
BseDI	CCNNGG	9 cut(s)	108, 1102, 1133, 1340, 1691, 1755, 1790, 1854, 1979
BseGI	GGATG	6 cut(s)	573, 766, 1231, 1535, 2080, 2173
BseMI	GCAATG	1 cut(s)	276
BseMII	CTCAG	2 cut(s)	421, 593
BseNI	ACTGG	5 cut(s)	182, 1046, 1419, 1460, 2258
BseX3I	CGGCCG	1 cut(s)	733
BseXI	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
BseYI	CCCAGC	2 cut(s)	513, 1033
BsgI	GTGCAG	4 cut(s)	202, 1023, 1452, 1719
Bsh1236I	CGCG	2 cut(s)	1104, 1126
Bsh1285I	CGRYCG	2 cut(s)	736, 2064
BshFI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BshTI	ACCGGT	2 cut(s)	857, 1483
BsiEI	CGRYCG	2 cut(s)	736, 2064
BsiHKAI	GWGCWC	2 cut(s)	200, 450
BsiHKCI	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
BsiSI	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
BslFI	GGGAC	4 cut(s)	347, 1429, 1649, 1712
BsmAI	GTCTC	3 cut(s)	9, 967, 2275
BsmFI	GGGAC	4 cut(s)	347, 1429, 1649, 1712
BsmI	GAATGC	2 cut(s)	642, 987
BsnI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BsoBI	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
Bsp119I	TTCGAA	1 cut(s)	495
Bsp1286I	GDGCHC	3 cut(s)	200, 450, 2226
Bsp143I	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
BspANI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BspCNI	CTCAG	2 cut(s)	420, 592
BspFNI	CGCG	2 cut(s)	1104, 1126
BspLI	GGNNCC	4 cut(s)	156, 502, 563, 939
BspMAI	CTGCAG	1 cut(s)	1058
BspMI	ACCTGC	2 cut(s)	297, 1474
BspPI	GGATC	4 cut(s)	411, 483, 537, 1011
BspQI	GCTCTTC	2 cut(s)	524, 812
BspT104I	TTCGAA	1 cut(s)	495
BsrDI	GCAATG	1 cut(s)	276
BsrFI	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
BsrI	ACTGG	5 cut(s)	182, 1046, 1419, 1460, 2258
BssAI	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
BssECI	CCNNGG	9 cut(s)	108, 1102, 1133, 1340, 1691, 1755, 1790, 1854, 1979
BssMI	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
BssNI	GRCGYC	2 cut(s)	357, 837
BssT1I	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
Bst2UI	CCWGG	4 cut(s)	133, 648, 993, 1342
Bst4CI	ACNGT	3 cut(s)	754, 1605, 1713
Bst6I	CTCTTC	4 cut(s)	332, 524, 812, 1723
BstACI	GRCGYC	2 cut(s)	357, 837
BstAPI	GCANNNNNTGC	1 cut(s)	984
BstBI	TTCGAA	1 cut(s)	495
BstC8I	GCNNGC	8 cut(s)	105, 253, 283, 719, 874, 891, 946, 1061
BstDEI	CTNAG	2 cut(s)	407, 579
BstDSI	CCRYGG	1 cut(s)	1102
BstEII	GGTNACC	1 cut(s)	1695
BstF5I	GGATG	6 cut(s)	573, 766, 1231, 1535, 2080, 2173
BstFNI	CGCG	2 cut(s)	1104, 1126
BstHHI	GCGC	1 cut(s)	1128
BstKTI	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1510
BstMAI	GTCTC	3 cut(s)	9, 967, 2275
BstMBI	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
BstMCI	CGRYCG	2 cut(s)	736, 2064
BstNI	CCWGG	4 cut(s)	133, 648, 993, 1342
BstNSI	RCATGY	1 cut(s)	667
BstPI	GGTNACC	1 cut(s)	1695
BstSCI	CCNGG	6 cut(s)	131, 646, 991, 1340, 1691, 1755
BstSFI	CTRYAG	1 cut(s)	1054
BstUI	CGCG	2 cut(s)	1104, 1126
BstV1I	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
BstV2I	GAAGAC	3 cut(s)	2, 205, 677
BstX2I	RGATCY	4 cut(s)	403, 475, 529, 1010
BstXI	CCANNNNNNTGG	3 cut(s)	1791, 1887, 1980
BstYI	RGATCY	4 cut(s)	403, 475, 529, 1010
BstZI	CGGCCG	1 cut(s)	733
BsuRI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BtgI	CCRYGG	1 cut(s)	1102
BtgZI	GCGATG	1 cut(s)	1197
BtrI	CACGTC	1 cut(s)	1043
BtsCI	GGATG	6 cut(s)	573, 766, 1231, 1535, 2080, 2173
BtsI	GCAGTG	1 cut(s)	948
BtsIMutI	CAGTG	3 cut(s)	948, 1053, 2265
BveI	ACCTGC	2 cut(s)	297, 1474
Cac8I	GCNNGC	8 cut(s)	105, 253, 283, 719, 874, 891, 946, 1061
CaiI	CAGNNNCTG	1 cut(s)	1466
CfoI	GCGC	1 cut(s)	1128
Cfr10I	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
Cfr13I	GGNCC	2 cut(s)	154, 785
Cfr42I	CCGCGG	1 cut(s)	1105
CseI	GACGC	2 cut(s)	346, 682
Csp6I	GTAC	6 cut(s)	469, 1395, 1457, 1463, 1478, 1714
CspAI	ACCGGT	2 cut(s)	857, 1483
CviAII	CATG	8 cut(s)	205, 395, 664, 1355, 1493, 1661, 1724, 2216
CviQI	GTAC	6 cut(s)	469, 1395, 1457, 1463, 1478, 1714
DdeI	CTNAG	2 cut(s)	407, 579
DpnI	GATC	9 cut(s)	405, 477, 531, 686, 731, 1005, 1012, 1228, 1509
DpnII	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
DraIII	CACNNNGTG	1 cut(s)	2219
DrdI	GACNNNNNNGTC	1 cut(s)	1207
DseDI	GACNNNNNNGTC	1 cut(s)	1207
EaeI	YGGCCR	4 cut(s)	618, 733, 1099, 1758
EagI	CGGCCG	1 cut(s)	733
Eam1104I	CTCTTC	4 cut(s)	332, 524, 812, 1723
EarI	CTCTTC	4 cut(s)	332, 524, 812, 1723
EciI	GGCGGA	6 cut(s)	787, 1305, 1695, 1740, 1833, 1929
EclXI	CGGCCG	1 cut(s)	733
Eco130I	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
Eco147I	AGGCCT	1 cut(s)	306
Eco24I	GRGCYC	1 cut(s)	2226
Eco47I	GGWCC	1 cut(s)	154
Eco52I	CGGCCG	1 cut(s)	733
Eco57I	CTGAAG	1 cut(s)	404
Eco88I	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
Eco91I	GGTNACC	1 cut(s)	1695
EcoO109I	RGGNCCY	1 cut(s)	785
EcoO65I	GGTNACC	1 cut(s)	1695
EcoRI	GAATTC	1 cut(s)	1161
EcoRII	CCWGG	4 cut(s)	131, 646, 991, 1340
EcoT14I	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
EcoT22I	ATGCAT	1 cut(s)	2281
EcoT38I	GRGCYC	1 cut(s)	2226
ErhI	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
FaeI	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2219
FaqI	GGGAC	4 cut(s)	347, 1429, 1649, 1712
FatI	CATG	8 cut(s)	204, 394, 663, 1354, 1492, 1660, 1723, 2215
FauI	CCCGC	4 cut(s)	1100, 1275, 1509, 1858
FauNDI	CATATG	1 cut(s)	2275
FbaI	TGATCA	1 cut(s)	1507
FokI	GGATG	6 cut(s)	560, 773, 1218, 1522, 2067, 2160
FriOI	GRGCYC	1 cut(s)	2226
FspBI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
GlaI	GCGC	1 cut(s)	1127
GsaI	CCCAGC	2 cut(s)	517, 1037
GsuI	CTGGAG	1 cut(s)	279
HaeIII	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
HapII	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
HgaI	GACGC	2 cut(s)	346, 682
HhaI	GCGC	1 cut(s)	1128
Hin1I	GRCGYC	2 cut(s)	357, 837
Hin1II	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2219
Hin6I	GCGC	1 cut(s)	1126
HinP1I	GCGC	1 cut(s)	1126
HindIII	AAGCTT	2 cut(s)	101, 370
HinfI	GANTC	7 cut(s)	77, 210, 583, 852, 1345, 1615, 2268
HpaII	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
Hpy166II	GTNNAC	6 cut(s)	1051, 1489, 1688, 1838, 1934, 2027
Hpy188I	TCNGA	6 cut(s)	154, 190, 316, 582, 590, 1200
Hpy188III	TCNNGA	4 cut(s)	296, 533, 1802, 1898
Hpy8I	GTNNAC	6 cut(s)	1051, 1489, 1688, 1838, 1934, 2027
Hpy99I	CGWCG	4 cut(s)	21, 362, 842, 2197
HpyAV	CCTTC	9 cut(s)	468, 491, 519, 925, 1161, 1227, 1281, 1314, 2085
HpyCH4III	ACNGT	3 cut(s)	754, 1605, 1713
HpyCH4IV	ACGT	2 cut(s)	837, 1042
HpyF3I	CTNAG	2 cut(s)	407, 579
HpySE526I	ACGT	2 cut(s)	837, 1042
Hsp92I	GRCGYC	2 cut(s)	357, 837
Hsp92II	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2219
HspAI	GCGC	1 cut(s)	1126
KroI	GCCGGC	2 cut(s)	251, 281
KroNI	GCCGGC	2 cut(s)	253, 283
Ksp22I	TGATCA	1 cut(s)	1507
KspI	CCGCGG	1 cut(s)	1105
Kzo9I	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
LguI	GCTCTTC	2 cut(s)	524, 812
Lsp1109I	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
LweI	GCATC	7 cut(s)	526, 582, 663, 1912, 2179, 2206, 2288
MaeI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
MaeII	ACGT	2 cut(s)	837, 1042
MaeIII	GTNAC	3 cut(s)	1114, 1542, 1695
MalI	GATC	9 cut(s)	405, 477, 531, 686, 731, 1005, 1012, 1228, 1509
MboI	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
MfeI	CAATTG	1 cut(s)	884
MflI	RGATCY	4 cut(s)	403, 475, 529, 1010
MhlI	GDGCHC	3 cut(s)	200, 450, 2226
MlsI	TGGCCA	1 cut(s)	620
MluCI	AATT	5 cut(s)	86, 884, 1161, 2121, 2298
MluNI	TGGCCA	1 cut(s)	620
MlyI	GAGTC	4 cut(s)	71, 219, 1339, 2277
MmeI	TCCRAC	6 cut(s)	168, 339, 366, 981, 1223, 1643
Mox20I	TGGCCA	1 cut(s)	620
Mph1103I	ATGCAT	1 cut(s)	2281
MroNI	GCCGGC	2 cut(s)	251, 281
MscI	TGGCCA	1 cut(s)	620
MseI	TTAA	1 cut(s)	486
MslI	CAYNNNNRTG	1 cut(s)	1353
Msp20I	TGGCCA	1 cut(s)	620
MspA1I	CMGCKG	6 cut(s)	1037, 1104, 1475, 1829, 1925, 2018
MspI	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
MspR9I	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
MunI	CAATTG	1 cut(s)	884
Mva1269I	GAATGC	2 cut(s)	642, 987
MvaI	CCWGG	4 cut(s)	133, 648, 993, 1342
MvnI	CGCG	2 cut(s)	1104, 1126
NaeI	GCCGGC	2 cut(s)	253, 283
NciI	CCSGG	2 cut(s)	1693, 1757
NdeI	CATATG	1 cut(s)	2275
NdeII	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
NgoMIV	GCCGGC	2 cut(s)	251, 281
NlaIII	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2219
NlaIV	GGNNCC	4 cut(s)	156, 502, 563, 939
NmuCI	GTSAC	3 cut(s)	1114, 1542, 1695
NsiI	ATGCAT	1 cut(s)	2281
NspI	RCATGY	1 cut(s)	667
NspV	TTCGAA	1 cut(s)	495
PceI	AGGCCT	1 cut(s)	306
PciI	ACATGT	1 cut(s)	663
PciSI	GCTCTTC	2 cut(s)	524, 812
PcsI	WCGNNNNNNNCGW	2 cut(s)	13, 501
PctI	GAATGC	2 cut(s)	642, 987
PdiI	GCCGGC	2 cut(s)	253, 283
PfeI	GAWTC	3 cut(s)	583, 852, 1615
PflFI	GACNNNGTC	1 cut(s)	1291
PflMI	CCANNNNNTGG	2 cut(s)	400, 2264
PinAI	ACCGGT	2 cut(s)	857, 1483
PleI	GAGTC	4 cut(s)	71, 218, 1339, 2276
PpsI	GAGTC	4 cut(s)	71, 218, 1339, 2276
PscI	ACATGT	1 cut(s)	663
Psp6I	CCWGG	4 cut(s)	131, 646, 991, 1340
PspEI	GGTNACC	1 cut(s)	1695
PspFI	CCCAGC	2 cut(s)	513, 1033
PspGI	CCWGG	4 cut(s)	131, 646, 991, 1340
PspN4I	GGNNCC	4 cut(s)	156, 502, 563, 939
PspPI	GGNCC	2 cut(s)	154, 785
PstI	CTGCAG	1 cut(s)	1058
PstNI	CAGNNNCTG	1 cut(s)	1466
PsuI	RGATCY	4 cut(s)	403, 475, 529, 1010
PsyI	GACNNNGTC	1 cut(s)	1291
PvuII	CAGCTG	5 cut(s)	1037, 1475, 1829, 1925, 2018
RsaI	GTAC	6 cut(s)	470, 1396, 1458, 1464, 1479, 1715
RsaNI	GTAC	6 cut(s)	469, 1395, 1457, 1463, 1478, 1714
RseI	CAYNNNNRTG	1 cut(s)	1353
SacII	CCGCGG	1 cut(s)	1105
SapI	GCTCTTC	2 cut(s)	524, 812
SaqAI	TTAA	1 cut(s)	486
Sau3AI	GATC	9 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1226, 1507
Sau96I	GGNCC	2 cut(s)	154, 785
ScaI	AGTACT	2 cut(s)	470, 1715
SchI	GAGTC	4 cut(s)	71, 219, 1339, 2277
ScrFI	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
SduI	GDGCHC	3 cut(s)	200, 450, 2226
SfaNI	GCATC	7 cut(s)	526, 582, 663, 1912, 2179, 2206, 2288
SfcI	CTRYAG	1 cut(s)	1054
Sfr303I	CCGCGG	1 cut(s)	1105
SfuI	TTCGAA	1 cut(s)	495
SgrAI	CRCCGGYG	1 cut(s)	857
SgrBI	CCGCGG	1 cut(s)	1105
SinI	GGWCC	1 cut(s)	154
SmiMI	CAYNNNNRTG	1 cut(s)	1353
SmlI	CTYRAG	1 cut(s)	464
SmoI	CTYRAG	1 cut(s)	464
SpeI	ACTAGT	1 cut(s)	1453
Sse9I	AATT	5 cut(s)	86, 884, 1161, 2121, 2298
SseBI	AGGCCT	1 cut(s)	306
SspMI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
StuI	AGGCCT	1 cut(s)	306
StyD4I	CCNGG	6 cut(s)	131, 646, 991, 1340, 1691, 1755
StyI	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
TaaI	ACNGT	3 cut(s)	754, 1605, 1713
TaiI	ACGT	2 cut(s)	840, 1045
TaqI	TCGA	5 cut(s)	173, 495, 522, 534, 1424
TaqII	GACCGA	1 cut(s)	2078
TasI	AATT	5 cut(s)	86, 884, 1161, 2121, 2298
TatI	WGTACW	2 cut(s)	468, 1713
TfiI	GAWTC	3 cut(s)	583, 852, 1615
Tru1I	TTAA	1 cut(s)	486
Tru9I	TTAA	1 cut(s)	486
TscAI	CASTG	3 cut(s)	955, 1053, 2265
TseFI	GTSAC	3 cut(s)	1114, 1542, 1695
TseI	GCWGC	9 cut(s)	62, 65, 68, 388, 714, 1037, 1056, 1925, 2018
Tsp45I	GTSAC	3 cut(s)	1114, 1542, 1695
TspDTI	ATGAA	3 cut(s)	830, 1343, 1779
TspGWI	ACGGA	2 cut(s)	470, 493
TspRI	CASTG	3 cut(s)	955, 1053, 2265
Tth111I	GACNNNGTC	1 cut(s)	1291
Van91I	CCANNNNNTGG	2 cut(s)	400, 2264
VpaK11BI	GGWCC	1 cut(s)	154
XapI	RAATTY	2 cut(s)	86, 1161
XceI	RCATGY	1 cut(s)	667
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1884
XspI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
ZraI	GACGTC	1 cut(s)	838
ZrmI	AGTACT	2 cut(s)	470, 1715
Zsp2I	ATGCAT	1 cut(s)	2281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.