Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0017485

Physical Location & Seq

Genomic Coordinates Reverse (-)

58796 .. 61065

Gene Structure 2270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00332680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGTCTCGTCTTCTTCGTCGTCTGTCTTTCTTGCTCCTCCTCCTCCTCCTCCACATCTGCTACGCTGCTGCTGCTGATGACTCACTCAAATTTGAGAACCCAAGGCTTGCCAAGGCTTACACCGCCCTCCAAGCCTGGAAGTCTGCCATCTTCTCGGACCCATTCAACTTCACCTCGAACTGGAACGGGTCGGACGTGTGCTCCTACATGGGAGTCTTCTGCACCGCCCTCCCCTCAATCGGGCGTGTTGTCGCCGGCATTGACCTCAACCACGCTGACATTGCCGGCTACCTGCCTCCAGAGCTAGGCCTCCTCTCCGACCTCGCTCTCTTCCACATCAACTCCAACCGCTTCTGCGGCGTCGTCCCCACAAGCTTTCGGCGACTGAAGCTGCTCCATGAGCTGGATCTCAGCAACAACCGCTTTGTGGGGAACTTCCCCAGAGTGGTGCTCTCCTTGCCTTCCCTCAAGTACTTGGATCTCCGTTTTAACGAGTTCGAAGGCTCCGTTCCTTCCCAGCTCTTCGACAAGGATCTCGATGCCATTTTCCTCAACGACAACAGGTTCCGCTTCGGCATCCCTCAGAATCTCGGAAACTCGCCGGTTTCGGTGCTGGTGTTGGCCAACAATAATCTTGGGGGTTGCATTCCAGGTAGCATCGGCAACATGTGGAAGACGCTTAACGAGATCATTCTGTTGAATGACAATCTCACCGGCTGCTTGCCTCCCCAGATCGGCCGCCTACGCAATCTCACCGTCTTTGATGTGAGCTTCAACCAGCTTCAAGGCCCTCTGCCCTCCGCCTCCATAGCCAAAATGAAGAGCTTGGAGGAGCTGGACGTCGCCCATAACAGATTCACCGGTGTAATACCAGCCAGCATTTGCCAATTGCCAGCCTTGCACAACTTCACCTATTCCTTCAACTACTTCACCGGAGAGGCTCCTGCTTGCACTGCAACTCCTGTCTCTCATAATGGTAGCAAGAACTGCATTCCTGGCAAGTTGGATCAAAGATCTACAAGGGAATGTGCTTCCCCAGCTGCACGTCCCGTGGACTGCAGCAAGCTCAAATGCGGAGGTGGAGGCGGTGGCGGTGGGGGTGGCCGCGGCGGGTCTGTCACAAAGCCGCGCCCTCCTCGGGCTTCAACACCTCCATCGCAAAGAATTCCTGTTCCTAAAGTTGCTCCTCCTCCACCCCCTCCGACTTCAAAGTCATCGCCTTCCACTAGATCACATCCTCCACCGCCAATATCAACATCAACATCACCCCCGCCTTCTTCACCTTCACCTTCACCGACCAAGTCAAAGCCGCCTTCACCTCCTCCACCACCTACTGAAAAAGACTCATCTTCATGTTCCTCCACCCCCACCTACCCAAAAGGTATCGCCAAGTACCCATCTAGCTCCACCTCCCCCAGTTCGACCCATTCCAACTATTCATCCCCGCCACTAGTACCAGTACCTGCACCAGCTGTACCACCGGTTTACCATGCCTCCCCGCCTGATCATCACTCTCATATAGTGCCTCCATCATCCCCGTCACCATCACCACCAAGTTATCATTCTTATGCTTCACCACCACCGCCGCCGCCTCCACAACAGTCTGTTGAGATTCCAACTCCTGCCCCACCATCACCACAACACTACTACTCACCGCATGTCCCACCAACAGAAGCTCCAAGCTACCAACATTCTTACAGTTCACCACCTCCACCCCTGTCACCGCCTCCGCCACAGTACTCTTCCCATGTCCCATCTCCAAACTATCATCATAGTCCGGGTTACACTTCACCTCCTCCACCTCCGCCCCCGGCCAATGAACATTATACAAAAGCACCACCACCTTGGCACACTCCCGAGCATTATTCCCCACCCAAAACAGCTGATAGTCCACCTCCGCCCCCGGCCAAGGAACATTATACAAAAGCTCCACCACCTTATTGGCACACTCCCGAGCATCATTCGCCACCCAAAACAGCTGCTAGTCCGCCTCCGCCTCCGACCAATGAGCATTATACAAATGCACCAACACCTTGGCACACGCCCGAGCATTATTCACCACCCAAAACAGCTGCAAGTCCACCTCCCCCTCCCCCATCAGCTCCTAATTCACCGACCGAGCCATCACCTTCCCATCCTCTGCCGCCCATAGGCTGCATCATTCCAGCACCAATTCTGCCATCACCACTCACCTCCTCAACAATGGCATCATCCACCACCACCATCATCATCGCATCAACAACCTCCTCCACATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0005198 GO:0005199 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0007275 GO:0008150 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016043 GO:0016049 GO:0022622 GO:0030054 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044464 GO:0048364 GO:0048468 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0055044 GO:0060560 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8

Protein Analysis

752

Amino Acids

80.18

Weight (kDa)

8.83

Isoelectric Point (pI)

85.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	41 - 75	2.9e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	108 - 165	9.9e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62440
fragaria_vesca	FvH4_4g00070
malus_domestica	MD04G1000500.v1.1
prunus_persica	Prupe.1G000500_v2.0.a1
rosa_laevigata	RLG00000010279
rosa_multiflora	Rmu_sc0006822.1_g000025
rosa_roxburghii	Rroxscaffold_5G00332680
rosa_rugosa	Rorug03G0296900
rosa_samantha	Rh4BG000400 Rh4CG000300 Rh4DG000400
rosa_wichuraiana	Rw4G000850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1210
AatII	GACGTC	1 cut(s)	843
Acc36I	ACCTGC	2 cut(s)	300, 1471
AccB7I	CCANNNNNTGG	1 cut(s)	403
AccII	CGCG	2 cut(s)	1107, 1129
AclWI	GGATC	4 cut(s)	414, 486, 540, 1014
AcoI	YGGCCR	5 cut(s)	621, 736, 1102, 1812, 1905
AcsI	RAATTY	2 cut(s)	89, 1164
AcuI	CTGAAG	1 cut(s)	407
AcyI	GRCGYC	2 cut(s)	360, 840
AdeI	CACNNNGTG	1 cut(s)	2256
AfaI	GTAC	6 cut(s)	473, 1394, 1455, 1461, 1476, 1739
AflIII	ACRYGT	2 cut(s)	195, 666
AgeI	ACCGGT	2 cut(s)	860, 1480
AgsI	TTSAA	7 cut(s)	166, 700, 775, 785, 922, 1146, 1209
AhlI	ACTAGT	1 cut(s)	1450
AjiI	CACGTC	2 cut(s)	196, 1046
AjnI	CCWGG	3 cut(s)	134, 649, 994
AjuI	GAANNNNNNNTTGG	2 cut(s)	1546, 1578
Alw21I	GWGCWC	2 cut(s)	203, 453
Alw26I	GTCTC	2 cut(s)	9, 970
AlwI	GGATC	4 cut(s)	414, 486, 540, 1014
AlwNI	CAGNNNCTG	1 cut(s)	1463
Ama87I	CYCGRG	4 cut(s)	1137, 1856, 1952, 2045
AoxI	GGCC	7 cut(s)	307, 621, 736, 787, 1102, 1812, 1905
ApoI	RAATTY	2 cut(s)	89, 1164
AsiGI	ACCGGT	2 cut(s)	860, 1480
AspLEI	GCGC	1 cut(s)	1131
AspS9I	GGNCC	2 cut(s)	157, 788
AsuC2I	CCSGG	3 cut(s)	1779, 1811, 1904
AsuII	TTCGAA	1 cut(s)	498
AvaI	CYCGRG	4 cut(s)	1137, 1856, 1952, 2045
AvaII	GGWCC	1 cut(s)	157
BalI	TGGCCA	1 cut(s)	623
BbsI	GAAGAC	3 cut(s)	2, 208, 680
Bbv12I	GWGCWC	2 cut(s)	203, 453
BciT130I	CCWGG	3 cut(s)	136, 651, 996
BclI	TGATCA	1 cut(s)	1504
BcnI	CCSGG	3 cut(s)	1779, 1811, 1904
BcoDI	GTCTC	2 cut(s)	9, 970
BcuI	ACTAGT	1 cut(s)	1450
BfaI	CTAG	5 cut(s)	305, 1227, 1401, 1451, 1983
BfmI	CTRYAG	1 cut(s)	1057
BfuAI	ACCTGC	2 cut(s)	300, 1471
BglII	AGATCT	1 cut(s)	1013
BmcAI	AGTACT	2 cut(s)	473, 1739
Bme1390I	CCNGG	6 cut(s)	136, 651, 996, 1779, 1811, 1904
Bme18I	GGWCC	1 cut(s)	157
BmeT110I	CYCGRG	4 cut(s)	1137, 1856, 1952, 2045
BmgBI	CACGTC	2 cut(s)	196, 1046
BmgT120I	GGNCC	2 cut(s)	157, 788
BmiI	GGNNCC	4 cut(s)	159, 505, 566, 942
BmrFI	CCNGG	6 cut(s)	136, 651, 996, 1779, 1811, 1904
BmrI	ACTGGG	1 cut(s)	1410
BmsI	GCATC	7 cut(s)	529, 585, 666, 1966, 2166, 2216, 2243
BmuI	ACTGGG	1 cut(s)	1410
BpiI	GAAGAC	3 cut(s)	2, 208, 680
BplI	GAGNNNNNCTC	2 cut(s)	435, 467
BpmI	CTGGAG	1 cut(s)	282
Bpu14I	TTCGAA	1 cut(s)	498
BpuEI	CTTGAG	1 cut(s)	452
BpuMI	CCSGG	3 cut(s)	1779, 1811, 1904
BsaHI	GRCGYC	2 cut(s)	360, 840
BsaWI	WCCGGW	3 cut(s)	860, 932, 1480
Bse118I	RCCGGY	6 cut(s)	254, 284, 601, 713, 860, 1480
Bse1I	ACTGG	3 cut(s)	185, 1416, 1457
Bse3DI	GCAATG	1 cut(s)	279
BseBI	CCWGG	3 cut(s)	136, 651, 996
BseGI	GGATG	6 cut(s)	576, 1234, 1439, 1532, 2134, 2210
BseMI	GCAATG	1 cut(s)	279
BseMII	CTCAG	2 cut(s)	424, 596
BseNI	ACTGG	3 cut(s)	185, 1416, 1457
BseX3I	CGGCCG	1 cut(s)	736
BseYI	CCCAGC	2 cut(s)	516, 1036
BsgI	GTGCAG	3 cut(s)	205, 1026, 1449
Bsh1236I	CGCG	2 cut(s)	1107, 1129
Bsh1285I	CGRYCG	2 cut(s)	739, 2118
BshFI	GGCC	7 cut(s)	309, 623, 738, 789, 1104, 1814, 1907
BshTI	ACCGGT	2 cut(s)	860, 1480
BsiEI	CGRYCG	2 cut(s)	739, 2118
BsiHKAI	GWGCWC	2 cut(s)	203, 453
BsiHKCI	CYCGRG	4 cut(s)	1137, 1856, 1952, 2045
BslFI	GGGAC	4 cut(s)	350, 1032, 1646, 1736
BsmAI	GTCTC	2 cut(s)	9, 970
BsmFI	GGGAC	4 cut(s)	350, 1032, 1646, 1736
BsmI	GAATGC	2 cut(s)	645, 990
BsnI	GGCC	7 cut(s)	309, 623, 738, 789, 1104, 1814, 1907
BsoBI	CYCGRG	4 cut(s)	1137, 1856, 1952, 2045
Bsp119I	TTCGAA	1 cut(s)	498
Bsp1286I	GDGCHC	2 cut(s)	203, 453
Bsp143I	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
BspANI	GGCC	7 cut(s)	309, 623, 738, 789, 1104, 1814, 1907
BspCNI	CTCAG	2 cut(s)	423, 595
BspFNI	CGCG	2 cut(s)	1107, 1129
BspLI	GGNNCC	4 cut(s)	159, 505, 566, 942
BspMAI	CTGCAG	1 cut(s)	1061
BspMI	ACCTGC	2 cut(s)	300, 1471
BspPI	GGATC	4 cut(s)	414, 486, 540, 1014
BspQI	GCTCTTC	2 cut(s)	527, 815
BspT104I	TTCGAA	1 cut(s)	498
BsrDI	GCAATG	1 cut(s)	279
BsrFI	RCCGGY	6 cut(s)	254, 284, 601, 713, 860, 1480
BsrI	ACTGG	3 cut(s)	185, 1416, 1457
BssAI	RCCGGY	6 cut(s)	254, 284, 601, 713, 860, 1480
BssMI	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
BssNI	GRCGYC	2 cut(s)	360, 840
BssT1I	CCWWGG	5 cut(s)	101, 111, 1844, 1908, 2033
Bst2UI	CCWGG	3 cut(s)	136, 651, 996
Bst4CI	ACNGT	4 cut(s)	757, 1602, 1700, 1737
Bst6I	CTCTTC	4 cut(s)	335, 527, 815, 1747
BstACI	GRCGYC	2 cut(s)	360, 840
BstAPI	GCANNNNNTGC	1 cut(s)	987
BstBI	TTCGAA	1 cut(s)	498
BstC8I	GCNNGC	8 cut(s)	108, 256, 286, 722, 877, 894, 949, 1064
BstDEI	CTNAG	2 cut(s)	410, 582
BstDSI	CCRYGG	2 cut(s)	1050, 1105
BstF5I	GGATG	6 cut(s)	576, 1234, 1439, 1532, 2134, 2210
BstFNI	CGCG	2 cut(s)	1107, 1129
BstHHI	GCGC	1 cut(s)	1131
BstKTI	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1232, 1507
BstMAI	GTCTC	2 cut(s)	9, 970
BstMBI	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
BstMCI	CGRYCG	2 cut(s)	739, 2118
BstNI	CCWGG	3 cut(s)	136, 651, 996
BstNSI	RCATGY	2 cut(s)	670, 1661
BstSCI	CCNGG	6 cut(s)	134, 649, 994, 1777, 1809, 1902
BstSFI	CTRYAG	1 cut(s)	1057
BstUI	CGCG	2 cut(s)	1107, 1129
BstV2I	GAAGAC	3 cut(s)	2, 208, 680
BstX2I	RGATCY	4 cut(s)	406, 478, 532, 1013
BstXI	CCANNNNNNTGG	3 cut(s)	1845, 1941, 2034
BstYI	RGATCY	4 cut(s)	406, 478, 532, 1013
BstZI	CGGCCG	1 cut(s)	736
BsuRI	GGCC	7 cut(s)	309, 623, 738, 789, 1104, 1814, 1907
BtgI	CCRYGG	2 cut(s)	1050, 1105
BtgZI	GCGATG	3 cut(s)	1140, 1200, 2215
BtrI	CACGTC	2 cut(s)	196, 1046
BtsCI	GGATG	6 cut(s)	576, 1234, 1439, 1532, 2134, 2210
BtsI	GCAGTG	1 cut(s)	951
BtsIMutI	CAGTG	1 cut(s)	951
BveI	ACCTGC	2 cut(s)	300, 1471
Cac8I	GCNNGC	8 cut(s)	108, 256, 286, 722, 877, 894, 949, 1064
CaiI	CAGNNNCTG	1 cut(s)	1463
CfoI	GCGC	1 cut(s)	1131
Cfr10I	RCCGGY	6 cut(s)	254, 284, 601, 713, 860, 1480
Cfr13I	GGNCC	2 cut(s)	157, 788
Cfr42I	CCGCGG	1 cut(s)	1108
CseI	GACGC	2 cut(s)	349, 685
Csp6I	GTAC	6 cut(s)	472, 1393, 1454, 1460, 1475, 1738
CspAI	ACCGGT	2 cut(s)	860, 1480
CviAII	CATG	8 cut(s)	208, 398, 667, 1353, 1490, 1658, 1748, 2253
CviQI	GTAC	6 cut(s)	472, 1393, 1454, 1460, 1475, 1738
DdeI	CTNAG	2 cut(s)	410, 582
DpnI	GATC	9 cut(s)	408, 480, 534, 689, 734, 1008, 1015, 1231, 1506
DpnII	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
DraIII	CACNNNGTG	1 cut(s)	2256
DrdI	GACNNNNNNGTC	1 cut(s)	1210
DseDI	GACNNNNNNGTC	1 cut(s)	1210
EaeI	YGGCCR	5 cut(s)	621, 736, 1102, 1812, 1905
EagI	CGGCCG	1 cut(s)	736
Eam1104I	CTCTTC	4 cut(s)	335, 527, 815, 1747
EarI	CTCTTC	4 cut(s)	335, 527, 815, 1747
EciI	GGCGGA	6 cut(s)	790, 1719, 1794, 1887, 1977, 1983
EclXI	CGGCCG	1 cut(s)	736
Eco130I	CCWWGG	5 cut(s)	101, 111, 1844, 1908, 2033
Eco147I	AGGCCT	1 cut(s)	309
Eco47I	GGWCC	1 cut(s)	157
Eco52I	CGGCCG	1 cut(s)	736
Eco57I	CTGAAG	1 cut(s)	407
Eco88I	CYCGRG	4 cut(s)	1137, 1856, 1952, 2045
EcoO109I	RGGNCCY	1 cut(s)	788
EcoRI	GAATTC	1 cut(s)	1164
EcoRII	CCWGG	3 cut(s)	134, 649, 994
EcoT14I	CCWWGG	5 cut(s)	101, 111, 1844, 1908, 2033
ErhI	CCWWGG	5 cut(s)	101, 111, 1844, 1908, 2033
FaeI	CATG	8 cut(s)	211, 401, 670, 1356, 1493, 1661, 1751, 2256
FaqI	GGGAC	4 cut(s)	350, 1032, 1646, 1736
FatI	CATG	8 cut(s)	207, 397, 666, 1352, 1489, 1657, 1747, 2252
FauI	CCCGC	4 cut(s)	1103, 1278, 1452, 1506
FbaI	TGATCA	1 cut(s)	1504
FokI	GGATG	6 cut(s)	563, 1221, 1426, 1519, 2121, 2197
FspBI	CTAG	5 cut(s)	305, 1227, 1401, 1451, 1983
GlaI	GCGC	1 cut(s)	1130
GsaI	CCCAGC	2 cut(s)	520, 1040
GsuI	CTGGAG	1 cut(s)	282
HaeIII	GGCC	7 cut(s)	309, 623, 738, 789, 1104, 1814, 1907
HgaI	GACGC	2 cut(s)	349, 685
HhaI	GCGC	1 cut(s)	1131
Hin1I	GRCGYC	2 cut(s)	360, 840
Hin1II	CATG	8 cut(s)	211, 401, 670, 1356, 1493, 1661, 1751, 2256
Hin6I	GCGC	1 cut(s)	1129
HinP1I	GCGC	1 cut(s)	1129
HindIII	AAGCTT	1 cut(s)	373
HinfI	GANTC	6 cut(s)	80, 213, 586, 855, 1343, 1612
Hpy166II	GTNNAC	5 cut(s)	1054, 1486, 1703, 1892, 2081
Hpy188I	TCNGA	7 cut(s)	157, 193, 319, 585, 593, 1203, 2001
Hpy188III	TCNNGA	4 cut(s)	299, 536, 1856, 1952
Hpy8I	GTNNAC	5 cut(s)	1054, 1486, 1703, 1892, 2081
Hpy99I	CGWCG	3 cut(s)	21, 365, 845
HpyCH4III	ACNGT	4 cut(s)	757, 1602, 1700, 1737
HpyCH4IV	ACGT	3 cut(s)	195, 840, 1045
HpyF3I	CTNAG	2 cut(s)	410, 582
HpySE526I	ACGT	3 cut(s)	195, 840, 1045
Hsp92I	GRCGYC	2 cut(s)	360, 840
Hsp92II	CATG	8 cut(s)	211, 401, 670, 1356, 1493, 1661, 1751, 2256
HspAI	GCGC	1 cut(s)	1129
KroI	GCCGGC	2 cut(s)	254, 284
KroNI	GCCGGC	2 cut(s)	256, 286
Ksp22I	TGATCA	1 cut(s)	1504
KspI	CCGCGG	1 cut(s)	1108
Kzo9I	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
LguI	GCTCTTC	2 cut(s)	527, 815
LweI	GCATC	7 cut(s)	529, 585, 666, 1966, 2166, 2216, 2243
MaeI	CTAG	5 cut(s)	305, 1227, 1401, 1451, 1983
MaeII	ACGT	3 cut(s)	195, 840, 1045
MaeIII	GTNAC	4 cut(s)	1117, 1539, 1719, 1781
MalI	GATC	9 cut(s)	408, 480, 534, 689, 734, 1008, 1015, 1231, 1506
MboI	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
MfeI	CAATTG	1 cut(s)	887
MflI	RGATCY	4 cut(s)	406, 478, 532, 1013
MhlI	GDGCHC	2 cut(s)	203, 453
MlsI	TGGCCA	1 cut(s)	623
MluCI	AATT	5 cut(s)	89, 887, 1164, 2107, 2172
MluNI	TGGCCA	1 cut(s)	623
MlyI	GAGTC	3 cut(s)	74, 222, 1337
MmeI	TCCRAC	8 cut(s)	171, 342, 369, 984, 1226, 1455, 1640, 2024
Mox20I	TGGCCA	1 cut(s)	623
MroNI	GCCGGC	2 cut(s)	254, 284
MscI	TGGCCA	1 cut(s)	623
MseI	TTAA	2 cut(s)	489, 681
MslI	CAYNNNNRTG	2 cut(s)	1351, 1566
Msp20I	TGGCCA	1 cut(s)	623
MspA1I	CMGCKG	6 cut(s)	1040, 1107, 1472, 1883, 1979, 2072
MspR9I	CCNGG	6 cut(s)	136, 651, 996, 1779, 1811, 1904
MunI	CAATTG	1 cut(s)	887
Mva1269I	GAATGC	2 cut(s)	645, 990
MvaI	CCWGG	3 cut(s)	136, 651, 996
MvnI	CGCG	2 cut(s)	1107, 1129
NaeI	GCCGGC	2 cut(s)	256, 286
NciI	CCSGG	3 cut(s)	1779, 1811, 1904
NdeII	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
NgoMIV	GCCGGC	2 cut(s)	254, 284
NlaIII	CATG	8 cut(s)	211, 401, 670, 1356, 1493, 1661, 1751, 2256
NlaIV	GGNNCC	4 cut(s)	159, 505, 566, 942
NmuCI	GTSAC	3 cut(s)	1117, 1539, 1719
NspI	RCATGY	2 cut(s)	670, 1661
NspV	TTCGAA	1 cut(s)	498
PceI	AGGCCT	1 cut(s)	309
PciI	ACATGT	1 cut(s)	666
PciSI	GCTCTTC	2 cut(s)	527, 815
PcsI	WCGNNNNNNNCGW	3 cut(s)	13, 192, 504
PctI	GAATGC	2 cut(s)	645, 990
PdiI	GCCGGC	2 cut(s)	256, 286
PfeI	GAWTC	3 cut(s)	586, 855, 1612
PflFI	GACNNNGTC	1 cut(s)	1300
PflMI	CCANNNNNTGG	1 cut(s)	403
PinAI	ACCGGT	2 cut(s)	860, 1480
PleI	GAGTC	3 cut(s)	74, 221, 1337
PpsI	GAGTC	3 cut(s)	74, 221, 1337
PscI	ACATGT	1 cut(s)	666
Psp6I	CCWGG	3 cut(s)	134, 649, 994
PspFI	CCCAGC	2 cut(s)	516, 1036
PspGI	CCWGG	3 cut(s)	134, 649, 994
PspN4I	GGNNCC	4 cut(s)	159, 505, 566, 942
PspPI	GGNCC	2 cut(s)	157, 788
PstI	CTGCAG	1 cut(s)	1061
PstNI	CAGNNNCTG	1 cut(s)	1463
PsuI	RGATCY	4 cut(s)	406, 478, 532, 1013
PsyI	GACNNNGTC	1 cut(s)	1300
PvuII	CAGCTG	5 cut(s)	1040, 1472, 1883, 1979, 2072
RsaI	GTAC	6 cut(s)	473, 1394, 1455, 1461, 1476, 1739
RsaNI	GTAC	6 cut(s)	472, 1393, 1454, 1460, 1475, 1738
RseI	CAYNNNNRTG	2 cut(s)	1351, 1566
SacII	CCGCGG	1 cut(s)	1108
SapI	GCTCTTC	2 cut(s)	527, 815
SaqAI	TTAA	2 cut(s)	489, 681
Sau3AI	GATC	9 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1229, 1504
Sau96I	GGNCC	2 cut(s)	157, 788
ScaI	AGTACT	2 cut(s)	473, 1739
SchI	GAGTC	3 cut(s)	74, 222, 1337
ScrFI	CCNGG	6 cut(s)	136, 651, 996, 1779, 1811, 1904
SduI	GDGCHC	2 cut(s)	203, 453
SfaNI	GCATC	7 cut(s)	529, 585, 666, 1966, 2166, 2216, 2243
SfcI	CTRYAG	1 cut(s)	1057
Sfr303I	CCGCGG	1 cut(s)	1108
SfuI	TTCGAA	1 cut(s)	498
SgrAI	CRCCGGYG	1 cut(s)	860
SgrBI	CCGCGG	1 cut(s)	1108
SinI	GGWCC	1 cut(s)	157
SmiMI	CAYNNNNRTG	2 cut(s)	1351, 1566
SmlI	CTYRAG	1 cut(s)	467
SmoI	CTYRAG	1 cut(s)	467
SpeI	ACTAGT	1 cut(s)	1450
Sse9I	AATT	5 cut(s)	89, 887, 1164, 2107, 2172
SseBI	AGGCCT	1 cut(s)	309
SspMI	CTAG	5 cut(s)	305, 1227, 1401, 1451, 1983
StuI	AGGCCT	1 cut(s)	309
StyD4I	CCNGG	6 cut(s)	134, 649, 994, 1777, 1809, 1902
StyI	CCWWGG	5 cut(s)	101, 111, 1844, 1908, 2033
TaaI	ACNGT	4 cut(s)	757, 1602, 1700, 1737
TaiI	ACGT	3 cut(s)	198, 843, 1048
TaqI	TCGA	5 cut(s)	176, 498, 525, 537, 1421
TaqII	GACCGA	1 cut(s)	2132
TasI	AATT	5 cut(s)	89, 887, 1164, 2107, 2172
TatI	WGTACW	2 cut(s)	471, 1737
TauI	GCSGC	9 cut(s)	360, 741, 1107, 1110, 1129, 1312, 1588, 1591, 2146
TfiI	GAWTC	3 cut(s)	586, 855, 1612
Tru1I	TTAA	2 cut(s)	489, 681
Tru9I	TTAA	2 cut(s)	489, 681
TscAI	CASTG	1 cut(s)	958
TseFI	GTSAC	3 cut(s)	1117, 1539, 1719
Tsp45I	GTSAC	3 cut(s)	1117, 1539, 1719
TspDTI	ATGAA	4 cut(s)	833, 1341, 1428, 1833
TspGWI	ACGGA	2 cut(s)	473, 496
TspRI	CASTG	1 cut(s)	958
Tth111I	GACNNNGTC	1 cut(s)	1300
Van91I	CCANNNNNTGG	1 cut(s)	403
VpaK11BI	GGWCC	1 cut(s)	157
XapI	RAATTY	2 cut(s)	89, 1164
XceI	RCATGY	2 cut(s)	670, 1661
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1938
XspI	CTAG	5 cut(s)	305, 1227, 1401, 1451, 1983
ZraI	GACGTC	1 cut(s)	841
ZrmI	AGTACT	2 cut(s)	473, 1739

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.