Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0017485

Physical Location & Seq

Genomic Coordinates Reverse (-)

83456 .. 86076

Gene Structure 2621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG000300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGTCTCGTCTTCTTCGTCGTCTGTCTTTCTTGCTCCTCCTCCACATCTGCTACGCTGCTGCTGCTGATGACTCACTCAAATTTGAGAACCCAAGGCTTGCCAAGGCTTACACCGCCCTCCAAGCCTGGAAGTCTGCCATCTTCTCGGACCCATTCAACTTCACCTCGAACTGGAACGGGTCGGACGTGTGCTCCTACATGGGAGTCTTCTGCACCGCCCTCCCCTCAATCGGGCGTGTTGTCGCCGGCATTGACCTCAACCACGCTGACATTGCCGGCTACCTGCCTCCAGAGCTAGGCCTCCTCTCCGACCTCGCTCTCTTCCACATCAACTCCAACCGCTTCTGCGGCGTCGTCCCCACAAGCTTTCGGCGACTGAAGCTGCTCCATGAGCTGGATCTCAGCAACAACCGCTTTGTGGGGAACTTCCCCAAAGTGGTGCTCTCCTTGCCTTCCCTCAAGTACTTGGATCTCCGTTTTAACGAGTTCGAAGGATCCGTTCCTTCCCAGCTCTTCGACAAGGATCTCGATGCCATTTTCCTCAACGACAACAGGTTCCGCTTCGGCATCCCTCAGAATCTCGGAAACTCGCCGGTTTCCGTGCTGGTGTTGGCCAACAATAATCTTGGGGGTTGCATTCCAGGTAGCATCGGCAACATGTGGAAGACGGTCAACGAGATCATTCTGTTGAATGACAATCTCACCGGCTGCTTGCCTCCCCAGATCGGCCGCCTACGCAATCTCACCGTCTTTGATGTGAGCTTCAACCAGCTTCAAGGCCCTCTGCCCTCCGCCTCCATAGCCAAAATGAAGAGCTTGGAGGAGCTGGACGTCGCCCATAACAGATTCACCGGTGTAATACCAGTCAGCATTTGCCAATTGCCAGCCTTGCACAACTTCACCTATTCCTTCAACTACTTCACCGGAGAGGCTCCTGCTTGCACTGCAACTCCTGTCTCTCATAATGGTAGCAAGAACTGCATTCCTGGCAAGTTGGATCAAAGATCTACACGGGAATGTGCTTCCCCAGCTGCTCGTCCCGTGGACTGCAGCAAGCTCAAATGCGGAGGTGGCGGTGGGGGCGGCCGCGGCGGGTCTGTCACAAAGCCGCGCCCTCCTCGGGCTTCAACACCTCCTTCGCAAAGAATTCCTGTTCCTAAAGTTGCTCCTCCTCCACCCCCTCCGACTTCAAAGTCATCGCCTTCCACTAGATCACATCCTCCACCGCCAATATCAACATCAACATCACCCCCGCCTTCTTCACCTTCACCGACCAAGTCAAAGCCGCCTTCACCTCCTCCGCCACCTACTGAAAAAGTATCACCCAGGACTCATCTTCATGTTCCTCCACCCCCACCTACCCAAAAGGTATCACCAAGTACCCATCTAGCTCCACCTCCCCCCAGTTCGACCCATTTCAACTATTCGTCCCCACCACTAGTACCAGTACCTGCACCAGCTGTACCACCGGTTTACCATGCCTCCCCGCCTGATCATCACTCTCATATAGTGCCTCCATCATCCCCGTCACCATCACCACCAAGTTATCATTCTTATGCTTCACCACCACCGCCGCCGCCTCCACAACAGTCTGTTGAGATTCCAACTCCTGCCCCACCATCACCACAACACTACTACTCCCCTCATGTCCCACCAACAGAAGCTCCGAGCTACCAACATTCTTACAGTTCACCACCTCCACCCCCGTCACCGCCTCCGCCACAGTACTCTTCCCATGTCCCAACTGCACCACCACCTTGGCACACTCCCGAGCATTATTCCCCACCCAAAACAGCTGCTAGTCCACCTCCGCCCCCGACCAATGAGCATTACACAAATGCACCACCACCCTGGCACACGCCCGAGCATTATTCACCACCCAAAACAGCTGCAAGTCCACCTCCCCCTCCCCCATCAGCTCCTATTTCACCGACCGAGCCATCACCTTCCCATCCTCTGCCGCCGCCCATAGGCTGTATCACTCCAGCACCAATTCTGCCACCTCCACCAAGCCATCACCACTCACCTCCTCAACAATGGCATCATCCACCACCACCATCATCGTCGCACCAACAACCTCCTCCACATGTTGAGCCCCCCAAGTTTGATAACAACCCTCCGCTTCCACCAGTGATTGGAGTCTCATATGCATCTCCTCCTCCTCCTGCAATTCCTTACTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0005198 GO:0005199 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0007275 GO:0008150 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016043 GO:0016049 GO:0022622 GO:0030054 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044464 GO:0048364 GO:0048468 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0055044 GO:0060560 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8

Protein Analysis

727

Amino Acids

77.86

Weight (kDa)

8.89

Isoelectric Point (pI)

86.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	38 - 72	2.8e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	105 - 162	1.4e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62440
fragaria_vesca	FvH4_4g00070
malus_domestica	MD04G1000500.v1.1
prunus_persica	Prupe.1G000500_v2.0.a1
rosa_laevigata	RLG00000010279
rosa_multiflora	Rmu_sc0006822.1_g000025
rosa_roxburghii	Rroxscaffold_5G00332680
rosa_rugosa	Rorug03G0296900
rosa_samantha	Rh4BG000400 Rh4CG000300 Rh4DG000400
rosa_wichuraiana	Rw4G000850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1192
AatII	GACGTC	1 cut(s)	834
Acc36I	ACCTGC	2 cut(s)	291, 1459
AccB7I	CCANNNNNTGG	2 cut(s)	394, 2135
AccII	CGCG	2 cut(s)	1089, 1111
AclWI	GGATC	6 cut(s)	405, 477, 489, 502, 531, 1005
AcoI	YGGCCR	3 cut(s)	612, 727, 1084
AcsI	RAATTY	2 cut(s)	80, 1146
AcuI	CTGAAG	1 cut(s)	398
AcyI	GRCGYC	2 cut(s)	351, 831
AfaI	GTAC	6 cut(s)	464, 1381, 1443, 1449, 1464, 1727
AflIII	ACRYGT	3 cut(s)	186, 657, 2086
AgeI	ACCGGT	2 cut(s)	851, 1468
AgsI	TTSAA	8 cut(s)	157, 691, 766, 776, 913, 1128, 1191, 1420
AhlI	ACTAGT	1 cut(s)	1438
AjiI	CACGTC	1 cut(s)	187
AjnI	CCWGG	5 cut(s)	125, 640, 985, 1325, 1850
AjuI	GAANNNNNNNTTGG	2 cut(s)	1534, 1566
Alw21I	GWGCWC	2 cut(s)	194, 444
Alw26I	GTCTC	3 cut(s)	9, 961, 2146
AlwI	GGATC	6 cut(s)	405, 477, 489, 502, 531, 1005
AlwNI	CAGNNNCTG	1 cut(s)	1451
Ama87I	CYCGRG	3 cut(s)	1119, 1769, 1862
AoxI	GGCC	5 cut(s)	298, 612, 727, 778, 1084
ApeKI	GCWGC	9 cut(s)	56, 59, 62, 382, 708, 1031, 1050, 1796, 1889
ApoI	RAATTY	2 cut(s)	80, 1146
AsiGI	ACCGGT	2 cut(s)	851, 1468
AspLEI	GCGC	1 cut(s)	1113
AspS9I	GGNCC	2 cut(s)	148, 779
AsuII	TTCGAA	1 cut(s)	489
AvaI	CYCGRG	3 cut(s)	1119, 1769, 1862
AvaII	GGWCC	1 cut(s)	148
BalI	TGGCCA	1 cut(s)	614
BamHI	GGATCC	1 cut(s)	494
BanII	GRGCYC	1 cut(s)	2097
BbsI	GAAGAC	3 cut(s)	2, 199, 671
Bbv12I	GWGCWC	2 cut(s)	194, 444
BbvI	GCAGC	9 cut(s)	43, 46, 49, 369, 695, 1018, 1062, 1783, 1876
BciT130I	CCWGG	5 cut(s)	127, 642, 987, 1327, 1852
BclI	TGATCA	1 cut(s)	1492
BcoDI	GTCTC	3 cut(s)	9, 961, 2146
BcuI	ACTAGT	1 cut(s)	1438
BfaI	CTAG	5 cut(s)	296, 1209, 1388, 1439, 1800
BfmI	CTRYAG	1 cut(s)	1048
BfuAI	ACCTGC	2 cut(s)	291, 1459
BglII	AGATCT	1 cut(s)	1004
BmcAI	AGTACT	2 cut(s)	464, 1727
Bme1390I	CCNGG	5 cut(s)	127, 642, 987, 1327, 1852
Bme18I	GGWCC	1 cut(s)	148
BmeT110I	CYCGRG	3 cut(s)	1119, 1769, 1862
BmgBI	CACGTC	1 cut(s)	187
BmgT120I	GGNCC	2 cut(s)	148, 779
BmiI	GGNNCC	4 cut(s)	150, 496, 557, 933
BmrFI	CCNGG	5 cut(s)	127, 642, 987, 1327, 1852
BmrI	ACTGGG	1 cut(s)	1398
BmsI	GCATC	5 cut(s)	520, 576, 657, 2050, 2159
BmuI	ACTGGG	1 cut(s)	1398
BpiI	GAAGAC	3 cut(s)	2, 199, 671
BpmI	CTGGAG	2 cut(s)	273, 1968
Bpu14I	TTCGAA	1 cut(s)	489
BpuEI	CTTGAG	1 cut(s)	443
BsaHI	GRCGYC	2 cut(s)	351, 831
BsaJI	CCNNGG	8 cut(s)	92, 102, 1041, 1087, 1118, 1325, 1757, 1850
BsaWI	WCCGGW	3 cut(s)	851, 923, 1468
Bse118I	RCCGGY	6 cut(s)	245, 275, 592, 704, 851, 1468
Bse1I	ACTGG	5 cut(s)	176, 863, 1404, 1445, 2129
Bse3DI	GCAATG	1 cut(s)	270
BseBI	CCWGG	5 cut(s)	127, 642, 987, 1327, 1852
BseDI	CCNNGG	8 cut(s)	92, 102, 1041, 1087, 1118, 1325, 1757, 1850
BseGI	GGATG	5 cut(s)	567, 1216, 1520, 1951, 2044
BseMI	GCAATG	1 cut(s)	270
BseMII	CTCAG	2 cut(s)	415, 587
BseNI	ACTGG	5 cut(s)	176, 863, 1404, 1445, 2129
BseX3I	CGGCCG	2 cut(s)	727, 1084
BseXI	GCAGC	9 cut(s)	43, 46, 49, 369, 695, 1018, 1062, 1783, 1876
BseYI	CCCAGC	2 cut(s)	507, 1027
BsgI	GTGCAG	3 cut(s)	196, 1437, 1731
Bsh1236I	CGCG	2 cut(s)	1089, 1111
Bsh1285I	CGRYCG	3 cut(s)	730, 1087, 1935
BshFI	GGCC	5 cut(s)	300, 614, 729, 780, 1086
BshTI	ACCGGT	2 cut(s)	851, 1468
BsiEI	CGRYCG	3 cut(s)	730, 1087, 1935
BsiHKAI	GWGCWC	2 cut(s)	194, 444
BsiHKCI	CYCGRG	3 cut(s)	1119, 1769, 1862
BsiSI	CCGG	7 cut(s)	246, 276, 593, 705, 852, 924, 1469
BslFI	GGGAC	5 cut(s)	341, 1023, 1414, 1634, 1724
BsmAI	GTCTC	3 cut(s)	9, 961, 2146
BsmFI	GGGAC	5 cut(s)	341, 1023, 1414, 1634, 1724
BsmI	GAATGC	2 cut(s)	636, 981
BsnI	GGCC	5 cut(s)	300, 614, 729, 780, 1086
BsoBI	CYCGRG	3 cut(s)	1119, 1769, 1862
Bsp119I	TTCGAA	1 cut(s)	489
Bsp1286I	GDGCHC	3 cut(s)	194, 444, 2097
BspANI	GGCC	5 cut(s)	300, 614, 729, 780, 1086
BspCNI	CTCAG	2 cut(s)	414, 586
BspFNI	CGCG	2 cut(s)	1089, 1111
BspLI	GGNNCC	4 cut(s)	150, 496, 557, 933
BspMAI	CTGCAG	1 cut(s)	1052
BspMI	ACCTGC	2 cut(s)	291, 1459
BspPI	GGATC	6 cut(s)	405, 477, 489, 502, 531, 1005
BspQI	GCTCTTC	2 cut(s)	518, 806
BspT104I	TTCGAA	1 cut(s)	489
BsrDI	GCAATG	1 cut(s)	270
BsrFI	RCCGGY	6 cut(s)	245, 275, 592, 704, 851, 1468
BsrI	ACTGG	5 cut(s)	176, 863, 1404, 1445, 2129
BssAI	RCCGGY	6 cut(s)	245, 275, 592, 704, 851, 1468
BssECI	CCNNGG	8 cut(s)	92, 102, 1041, 1087, 1118, 1325, 1757, 1850
BssNI	GRCGYC	2 cut(s)	351, 831
BssT1I	CCWWGG	3 cut(s)	92, 102, 1757
Bst2UI	CCWGG	5 cut(s)	127, 642, 987, 1327, 1852
Bst4CI	ACNGT	5 cut(s)	670, 748, 1590, 1688, 1725
Bst6I	CTCTTC	4 cut(s)	326, 518, 806, 1735
BstACI	GRCGYC	2 cut(s)	351, 831
BstAPI	GCANNNNNTGC	1 cut(s)	978
BstBI	TTCGAA	1 cut(s)	489
BstC8I	GCNNGC	7 cut(s)	99, 247, 277, 713, 885, 940, 1055
BstDEI	CTNAG	2 cut(s)	401, 573
BstDSI	CCRYGG	2 cut(s)	1041, 1087
BstF5I	GGATG	5 cut(s)	567, 1216, 1520, 1951, 2044
BstFNI	CGCG	2 cut(s)	1089, 1111
BstHHI	GCGC	1 cut(s)	1113
BstMAI	GTCTC	3 cut(s)	9, 961, 2146
BstMCI	CGRYCG	3 cut(s)	730, 1087, 1935
BstNI	CCWGG	5 cut(s)	127, 642, 987, 1327, 1852
BstNSI	RCATGY	2 cut(s)	661, 2090
BstSCI	CCNGG	5 cut(s)	125, 640, 985, 1325, 1850
BstSFI	CTRYAG	1 cut(s)	1048
BstUI	CGCG	2 cut(s)	1089, 1111
BstV1I	GCAGC	9 cut(s)	43, 46, 49, 369, 695, 1018, 1062, 1783, 1876
BstV2I	GAAGAC	3 cut(s)	2, 199, 671
BstX2I	RGATCY	5 cut(s)	397, 469, 494, 523, 1004
BstXI	CCANNNNNNTGG	2 cut(s)	1758, 1851
BstYI	RGATCY	5 cut(s)	397, 469, 494, 523, 1004
BstZI	CGGCCG	2 cut(s)	727, 1084
BsuRI	GGCC	5 cut(s)	300, 614, 729, 780, 1086
BtgI	CCRYGG	2 cut(s)	1041, 1087
BtgZI	GCGATG	1 cut(s)	1182
BtrI	CACGTC	1 cut(s)	187
BtsCI	GGATG	5 cut(s)	567, 1216, 1520, 1951, 2044
BtsI	GCAGTG	1 cut(s)	942
BtsIMutI	CAGTG	2 cut(s)	942, 2136
BveI	ACCTGC	2 cut(s)	291, 1459
Cac8I	GCNNGC	7 cut(s)	99, 247, 277, 713, 885, 940, 1055
CaiI	CAGNNNCTG	1 cut(s)	1451
CciNI	GCGGCCGC	1 cut(s)	1084
CfoI	GCGC	1 cut(s)	1113
Cfr10I	RCCGGY	6 cut(s)	245, 275, 592, 704, 851, 1468
Cfr13I	GGNCC	2 cut(s)	148, 779
Cfr42I	CCGCGG	1 cut(s)	1090
CseI	GACGC	1 cut(s)	340
Csp6I	GTAC	6 cut(s)	463, 1380, 1442, 1448, 1463, 1726
CspAI	ACCGGT	2 cut(s)	851, 1468
CviAII	CATG	8 cut(s)	199, 389, 658, 1340, 1478, 1646, 1736, 2087
CviQI	GTAC	6 cut(s)	463, 1380, 1442, 1448, 1463, 1726
DdeI	CTNAG	2 cut(s)	401, 573
DrdI	GACNNNNNNGTC	1 cut(s)	1192
DseDI	GACNNNNNNGTC	1 cut(s)	1192
EaeI	YGGCCR	3 cut(s)	612, 727, 1084
EagI	CGGCCG	2 cut(s)	727, 1084
Eam1104I	CTCTTC	4 cut(s)	326, 518, 806, 1735
EarI	CTCTTC	4 cut(s)	326, 518, 806, 1735
EciI	GGCGGA	4 cut(s)	781, 1290, 1707, 1800
EclXI	CGGCCG	2 cut(s)	727, 1084
Eco130I	CCWWGG	3 cut(s)	92, 102, 1757
Eco147I	AGGCCT	1 cut(s)	300
Eco24I	GRGCYC	1 cut(s)	2097
Eco47I	GGWCC	1 cut(s)	148
Eco52I	CGGCCG	2 cut(s)	727, 1084
Eco57I	CTGAAG	1 cut(s)	398
Eco88I	CYCGRG	3 cut(s)	1119, 1769, 1862
EcoO109I	RGGNCCY	1 cut(s)	779
EcoRI	GAATTC	1 cut(s)	1146
EcoRII	CCWGG	5 cut(s)	125, 640, 985, 1325, 1850
EcoT14I	CCWWGG	3 cut(s)	92, 102, 1757
EcoT22I	ATGCAT	1 cut(s)	2152
EcoT38I	GRGCYC	1 cut(s)	2097
ErhI	CCWWGG	3 cut(s)	92, 102, 1757
FaeI	CATG	8 cut(s)	202, 392, 661, 1343, 1481, 1649, 1739, 2090
FaqI	GGGAC	5 cut(s)	341, 1023, 1414, 1634, 1724
FatI	CATG	8 cut(s)	198, 388, 657, 1339, 1477, 1645, 1735, 2086
FauI	CCCGC	3 cut(s)	1085, 1260, 1494
FauNDI	CATATG	1 cut(s)	2146
FbaI	TGATCA	1 cut(s)	1492
FokI	GGATG	5 cut(s)	554, 1203, 1507, 1938, 2031
FriOI	GRGCYC	1 cut(s)	2097
FspBI	CTAG	5 cut(s)	296, 1209, 1388, 1439, 1800
GlaI	GCGC	1 cut(s)	1112
GsaI	CCCAGC	2 cut(s)	511, 1031
GsuI	CTGGAG	2 cut(s)	273, 1968
HaeIII	GGCC	5 cut(s)	300, 614, 729, 780, 1086
HapII	CCGG	7 cut(s)	246, 276, 593, 705, 852, 924, 1469
HgaI	GACGC	1 cut(s)	340
HhaI	GCGC	1 cut(s)	1113
Hin1I	GRCGYC	2 cut(s)	351, 831
Hin1II	CATG	8 cut(s)	202, 392, 661, 1343, 1481, 1649, 1739, 2090
Hin6I	GCGC	1 cut(s)	1111
HinP1I	GCGC	1 cut(s)	1111
HincII	GTYRAC	1 cut(s)	673
HindII	GTYRAC	1 cut(s)	673
HindIII	AAGCTT	1 cut(s)	364
HinfI	GANTC	7 cut(s)	71, 204, 577, 846, 1330, 1600, 2139
HpaII	CCGG	7 cut(s)	246, 276, 593, 705, 852, 924, 1469
Hpy166II	GTNNAC	6 cut(s)	673, 1045, 1474, 1691, 1805, 1898
Hpy188I	TCNGA	7 cut(s)	148, 184, 310, 576, 584, 1185, 1668
Hpy188III	TCNNGA	3 cut(s)	290, 527, 1769
Hpy8I	GTNNAC	6 cut(s)	673, 1045, 1474, 1691, 1805, 1898
Hpy99I	CGWCG	4 cut(s)	21, 356, 836, 2068
HpyCH4III	ACNGT	5 cut(s)	670, 748, 1590, 1688, 1725
HpyCH4IV	ACGT	2 cut(s)	186, 831
HpyF3I	CTNAG	2 cut(s)	401, 573
HpySE526I	ACGT	2 cut(s)	186, 831
Hsp92I	GRCGYC	2 cut(s)	351, 831
Hsp92II	CATG	8 cut(s)	202, 392, 661, 1343, 1481, 1649, 1739, 2090
HspAI	GCGC	1 cut(s)	1111
KroI	GCCGGC	2 cut(s)	245, 275
KroNI	GCCGGC	2 cut(s)	247, 277
Ksp22I	TGATCA	1 cut(s)	1492
KspI	CCGCGG	1 cut(s)	1090
LguI	GCTCTTC	2 cut(s)	518, 806
LmnI	GCTCC	9 cut(s)	39, 197, 390, 823, 937, 1171, 1396, 1669, 1924
Lsp1109I	GCAGC	9 cut(s)	43, 46, 49, 369, 695, 1018, 1062, 1783, 1876
LweI	GCATC	5 cut(s)	520, 576, 657, 2050, 2159
MaeI	CTAG	5 cut(s)	296, 1209, 1388, 1439, 1800
MaeII	ACGT	2 cut(s)	186, 831
MaeIII	GTNAC	3 cut(s)	1099, 1527, 1707
MfeI	CAATTG	1 cut(s)	878
MflI	RGATCY	5 cut(s)	397, 469, 494, 523, 1004
MhlI	GDGCHC	3 cut(s)	194, 444, 2097
MlsI	TGGCCA	1 cut(s)	614
MluCI	AATT	5 cut(s)	80, 878, 1146, 1992, 2169
MluNI	TGGCCA	1 cut(s)	614
MlyI	GAGTC	4 cut(s)	65, 213, 1324, 2148
MmeI	TCCRAC	6 cut(s)	162, 333, 360, 975, 1208, 1628
Mox20I	TGGCCA	1 cut(s)	614
Mph1103I	ATGCAT	1 cut(s)	2152
MroNI	GCCGGC	2 cut(s)	245, 275
MscI	TGGCCA	1 cut(s)	614
MseI	TTAA	1 cut(s)	480
MslI	CAYNNNNRTG	3 cut(s)	1015, 1338, 1554
Msp20I	TGGCCA	1 cut(s)	614
MspA1I	CMGCKG	5 cut(s)	1031, 1089, 1460, 1796, 1889
MspI	CCGG	7 cut(s)	246, 276, 593, 705, 852, 924, 1469
MspR9I	CCNGG	5 cut(s)	127, 642, 987, 1327, 1852
MunI	CAATTG	1 cut(s)	878
Mva1269I	GAATGC	2 cut(s)	636, 981
MvaI	CCWGG	5 cut(s)	127, 642, 987, 1327, 1852
MvnI	CGCG	2 cut(s)	1089, 1111
NaeI	GCCGGC	2 cut(s)	247, 277
NdeI	CATATG	1 cut(s)	2146
NgoMIV	GCCGGC	2 cut(s)	245, 275
NlaIII	CATG	8 cut(s)	202, 392, 661, 1343, 1481, 1649, 1739, 2090
NlaIV	GGNNCC	4 cut(s)	150, 496, 557, 933
NmuCI	GTSAC	3 cut(s)	1099, 1527, 1707
NotI	GCGGCCGC	1 cut(s)	1084
NsiI	ATGCAT	1 cut(s)	2152
NspI	RCATGY	2 cut(s)	661, 2090
NspV	TTCGAA	1 cut(s)	489
PceI	AGGCCT	1 cut(s)	300
PciI	ACATGT	2 cut(s)	657, 2086
PciSI	GCTCTTC	2 cut(s)	518, 806
PcsI	WCGNNNNNNNCGW	3 cut(s)	13, 183, 495
PctI	GAATGC	2 cut(s)	636, 981
PdiI	GCCGGC	2 cut(s)	247, 277
PfeI	GAWTC	3 cut(s)	577, 846, 1600
PflFI	GACNNNGTC	1 cut(s)	1276
PflMI	CCANNNNNTGG	2 cut(s)	394, 2135
PinAI	ACCGGT	2 cut(s)	851, 1468
PleI	GAGTC	4 cut(s)	65, 212, 1324, 2147
PpsI	GAGTC	4 cut(s)	65, 212, 1324, 2147
PscI	ACATGT	2 cut(s)	657, 2086
Psp6I	CCWGG	5 cut(s)	125, 640, 985, 1325, 1850
PspFI	CCCAGC	2 cut(s)	507, 1027
PspGI	CCWGG	5 cut(s)	125, 640, 985, 1325, 1850
PspN4I	GGNNCC	4 cut(s)	150, 496, 557, 933
PspPI	GGNCC	2 cut(s)	148, 779
PstI	CTGCAG	1 cut(s)	1052
PstNI	CAGNNNCTG	1 cut(s)	1451
PsuI	RGATCY	5 cut(s)	397, 469, 494, 523, 1004
PsyI	GACNNNGTC	1 cut(s)	1276
PvuII	CAGCTG	4 cut(s)	1031, 1460, 1796, 1889
RsaI	GTAC	6 cut(s)	464, 1381, 1443, 1449, 1464, 1727
RsaNI	GTAC	6 cut(s)	463, 1380, 1442, 1448, 1463, 1726
RseI	CAYNNNNRTG	3 cut(s)	1015, 1338, 1554
SacII	CCGCGG	1 cut(s)	1090
SapI	GCTCTTC	2 cut(s)	518, 806
SaqAI	TTAA	1 cut(s)	480
Sau96I	GGNCC	2 cut(s)	148, 779
ScaI	AGTACT	2 cut(s)	464, 1727
SchI	GAGTC	4 cut(s)	65, 213, 1324, 2148
ScrFI	CCNGG	5 cut(s)	127, 642, 987, 1327, 1852
SduI	GDGCHC	3 cut(s)	194, 444, 2097
SfaNI	GCATC	5 cut(s)	520, 576, 657, 2050, 2159
SfcI	CTRYAG	1 cut(s)	1048
Sfr303I	CCGCGG	1 cut(s)	1090
SfuI	TTCGAA	1 cut(s)	489
SgrAI	CRCCGGYG	1 cut(s)	851
SgrBI	CCGCGG	1 cut(s)	1090
SinI	GGWCC	1 cut(s)	148
SmiMI	CAYNNNNRTG	3 cut(s)	1015, 1338, 1554
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
SpeI	ACTAGT	1 cut(s)	1438
Sse9I	AATT	5 cut(s)	80, 878, 1146, 1992, 2169
SseBI	AGGCCT	1 cut(s)	300
SspMI	CTAG	5 cut(s)	296, 1209, 1388, 1439, 1800
StuI	AGGCCT	1 cut(s)	300
StyD4I	CCNGG	5 cut(s)	125, 640, 985, 1325, 1850
StyI	CCWWGG	3 cut(s)	92, 102, 1757
TaaI	ACNGT	5 cut(s)	670, 748, 1590, 1688, 1725
TaiI	ACGT	2 cut(s)	189, 834
TaqI	TCGA	5 cut(s)	167, 489, 516, 528, 1409
TaqII	GACCGA	1 cut(s)	1949
TasI	AATT	5 cut(s)	80, 878, 1146, 1992, 2169
TatI	WGTACW	2 cut(s)	462, 1725
TfiI	GAWTC	3 cut(s)	577, 846, 1600
Tru1I	TTAA	1 cut(s)	480
Tru9I	TTAA	1 cut(s)	480
TscAI	CASTG	2 cut(s)	949, 2136
TseFI	GTSAC	3 cut(s)	1099, 1527, 1707
TseI	GCWGC	9 cut(s)	56, 59, 62, 382, 708, 1031, 1050, 1796, 1889
Tsp45I	GTSAC	3 cut(s)	1099, 1527, 1707
TspDTI	ATGAA	2 cut(s)	824, 1328
TspGWI	ACGGA	3 cut(s)	464, 487, 589
TspRI	CASTG	2 cut(s)	949, 2136
Tth111I	GACNNNGTC	1 cut(s)	1276
Van91I	CCANNNNNTGG	2 cut(s)	394, 2135
VpaK11BI	GGWCC	1 cut(s)	148
XapI	RAATTY	2 cut(s)	80, 1146
XceI	RCATGY	2 cut(s)	661, 2090
XspI	CTAG	5 cut(s)	296, 1209, 1388, 1439, 1800
ZraI	GACGTC	1 cut(s)	832
ZrmI	AGTACT	2 cut(s)	464, 1727
Zsp2I	ATGCAT	1 cut(s)	2152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.