Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0017485

Physical Location & Seq

Genomic Coordinates Forward (+)

1664736 .. 1667315

Gene Structure 2580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G000850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGTCTCGTCTTCTTCGTCGTCTGTCTTTCTTGCTCCTCCTCCTCCTCCACATCAGCTACGCTGCTGCTGCTGATGACTCACTCAAATTTGAGAACCCAAAGCTTGCCAAGGCTTACACCGCCCTCCAAGCCTGGAAGTCTGCCATCTTCTCGGACCCATTCAACTTCACCTCGAACTGGAACGGGTCGGACGTGTGCTCCTACATGGGAGTCTTCTGCACCGCCCTCCCCTCAATCGGGCGTGTTGTCGCCGGCATTGACCTCAACCACGCTGACATTGCCGGCTACCTGCCTCCAGAGCTAGGCCTCCTCTCCGACCTCGCTCTCTTCCACATCAACTCCAACCGCTTCTGCGGCGTCGTCCCCACAAGCTTTCGGCGACTGAAGCTGCTCCATGAGCTGGATCTCAGCAACAACCGCTTTGTGGGGAACTTCCCCAAAGTGGTGCTCTCCTTGCCTTCCCTCAAGTACTTGGATCTCCGTTTTAACGAGTTCGAAGGCTCCGTTCCTTCCCAGCTCTTCGACAAGGATCTCGATGCCATTTTCCTCAACGACAACAGGTTCCGCTTCGGCATCCCTCAGAATCTCGGAAACTCGCCGGTTTCGGTGCTGGTGTTGGCCAACAATAATCTTGGGGGTTGCATTCCAGGTAGCATCGGCAACATGTGGAAGACGCTCAACGAGATCATTCTGTTGAATGACAATCTCACCGGCTGCTTGCCTCCCCAGATCGGCCGCCTACGCAATCTCACCGTCTTTGATGTGAGCTTCAACCAGCTTCAAGGCCCTCTGCCCTCCGCCTCCATAGCCAAAATGAAGAGCTTGGAGGAGCTGGACGTCGCCCATAACAGATTCACCGGTGTAATACCAGCCAGCATTTGCCAATTGCCAGCCTTGCACAACTTCACCTATTCCTTCAACTACTTCACCGGAGAGGCTCCTGCTTGCACTGCAACTCCTGTCTCTCACAATGGTAGCAAGAACTGCATTCCTGGCAAGTTGGATCAAAGATCTACAAGGGAATGTGCTTCCCCAGCTGCACGTCCAGTGGACTGCAGCAAGCTCAAATGCGGAGGTGGTGGCGGTGGCGGTGGGGGTGGCCGCGGCGGGTCTGTCACAAAGCCGCGCCCTCCTCGGGCTTCAACACCTCCTTCGCAAAGAATTCCTGTTCCTAAAGTTGCTCCTCCTCCACCCCCTCCGACTTCAAAGTCATCGCCTTCCACTAGGTCACATCCTCCACCGCCAATATCAACATCAACATCACCCCCGCCTTCTTCACCTTCACCGACCAAGTCAAAGCCGCCTTCACCTCCTCCGCCACCTACTGAAAAAGTATCACCCAGGACTCATCTTCATGTTCCTCCACCCCCACCAACCCAAAAGGTATCACCAAGTACCCATCTAGCTCCACCTCCCCCCAGTTCGACCCATTTCAACTATTCGTCCCCACCACTAGTACCAGTACCTGCACCAGCTGTACCACCGGTTTACCATGCCTCCCCGCCTGATCATCACTCTCATATAGTGCCTCCATCATCCCCGTCACCATCACCACCAAGTTATCATTCTTATGCTTCACCACCACCGCCGCCGCCTCCACAACAGTCTGTTGAGATTCCAACTCCTGCCCCACCATCACCACAACACTACTACTCACCTCATGTCCCACCAACAGAAGCTCCAAGTCCACCCCGGTCACCGCCTCCGCCACAGTACTCTTCCCATGTCCCAACTGCACCTCCTCCACCTCCGCCCCCGGCCAATGAACATTATACAAAAGCACCACCACCTTGGCACACTCCCGAGCATTATTCCCCACCCAAAACAGCTGATAGTCCACCTCCGCCCCCCGCCAAGGAACATTATGCAAAAGCTCCACCACCTTATTGGCACACTCCCGAGCATCATTCGCCACCCAAAACAGCTGCTAGTCCACCTCCGCCCCCGACCAATGAGCATTACACAAATGCACCACCACCTTGGCACACGCCCGAGCATTATTCACCACCCAAAACAGCTGCAAGTCCACCTCCCCCTCCCCCTCCCCCTCCCCCATCAGCTCCTATTTCACCGACCGAGCCATCACCTTCCCATCCTCTGCCGCCGCCCATAGGCTGTATCATTCCAGCACCAATTCTGCCACCTCCACCAAGCCATCACCACTCACCTCCTCAACAATGGCATCATCCACCACCACCATCATCGTCGCATCAACAACCTCCTCCACATGGTGAGCCCCCCAAGTTTGATTACAACCCTCCGCTTCCACCAGTGATTGGAGTCTCATATGCATCTCCTCCTCCTCCTGCAATTCCTTACTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0005198 GO:0005199 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0007275 GO:0008150 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016043 GO:0016049 GO:0022622 GO:0030054 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044464 GO:0048364 GO:0048468 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0055044 GO:0060560 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8

Protein Analysis

774

Amino Acids

82.76

Weight (kDa)

8.95

Isoelectric Point (pI)

89.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	40 - 74	3e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	107 - 164	1.5e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62440
fragaria_vesca	FvH4_4g00070
malus_domestica	MD04G1000500.v1.1
prunus_persica	Prupe.1G000500_v2.0.a1
rosa_laevigata	RLG00000010279
rosa_multiflora	Rmu_sc0006822.1_g000025
rosa_roxburghii	Rroxscaffold_5G00332680
rosa_rugosa	Rorug03G0296900
rosa_samantha	Rh4BG000400 Rh4CG000300 Rh4DG000400
rosa_wichuraiana	Rw4G000850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1207
AatII	GACGTC	1 cut(s)	840
Acc36I	ACCTGC	2 cut(s)	297, 1474
AccB7I	CCANNNNNTGG	2 cut(s)	400, 2276
AccII	CGCG	2 cut(s)	1104, 1126
AclWI	GGATC	4 cut(s)	411, 483, 537, 1011
AcoI	YGGCCR	4 cut(s)	618, 733, 1099, 1758
AcsI	RAATTY	2 cut(s)	86, 1161
AcuI	CTGAAG	1 cut(s)	404
AcyI	GRCGYC	2 cut(s)	357, 837
AdeI	CACNNNGTG	1 cut(s)	2231
AfaI	GTAC	6 cut(s)	470, 1396, 1458, 1464, 1479, 1715
AflIII	ACRYGT	2 cut(s)	192, 663
AgeI	ACCGGT	2 cut(s)	857, 1483
AgsI	TTSAA	8 cut(s)	163, 697, 772, 782, 919, 1143, 1206, 1435
AhlI	ACTAGT	1 cut(s)	1453
AjiI	CACGTC	2 cut(s)	193, 1043
AjnI	CCWGG	4 cut(s)	131, 646, 991, 1340
AjuI	GAANNNNNNNTTGG	2 cut(s)	1549, 1581
Alw21I	GWGCWC	2 cut(s)	200, 450
Alw26I	GTCTC	3 cut(s)	9, 967, 2287
AlwI	GGATC	4 cut(s)	411, 483, 537, 1011
AlwNI	CAGNNNCTG	1 cut(s)	1466
Ama87I	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
AoxI	GGCC	6 cut(s)	304, 618, 733, 784, 1099, 1758
ApeKI	GCWGC	9 cut(s)	62, 65, 68, 388, 714, 1037, 1056, 1925, 2018
ApoI	RAATTY	2 cut(s)	86, 1161
AsiGI	ACCGGT	2 cut(s)	857, 1483
AspLEI	GCGC	1 cut(s)	1128
AspS9I	GGNCC	2 cut(s)	154, 785
AsuC2I	CCSGG	2 cut(s)	1693, 1757
AsuII	TTCGAA	1 cut(s)	495
AvaI	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
AvaII	GGWCC	1 cut(s)	154
BalI	TGGCCA	1 cut(s)	620
BanII	GRGCYC	1 cut(s)	2238
BbsI	GAAGAC	3 cut(s)	2, 205, 677
Bbv12I	GWGCWC	2 cut(s)	200, 450
BbvI	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
BciT130I	CCWGG	4 cut(s)	133, 648, 993, 1342
BclI	TGATCA	1 cut(s)	1507
BcnI	CCSGG	2 cut(s)	1693, 1757
BcoDI	GTCTC	3 cut(s)	9, 967, 2287
BcuI	ACTAGT	1 cut(s)	1453
BfaI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
BfmI	CTRYAG	1 cut(s)	1054
BfuAI	ACCTGC	2 cut(s)	297, 1474
BglII	AGATCT	1 cut(s)	1010
BmcAI	AGTACT	2 cut(s)	470, 1715
Bme1390I	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
Bme18I	GGWCC	1 cut(s)	154
BmeT110I	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
BmgBI	CACGTC	2 cut(s)	193, 1043
BmgT120I	GGNCC	2 cut(s)	154, 785
BmiI	GGNNCC	4 cut(s)	156, 502, 563, 939
BmrFI	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
BmrI	ACTGGG	1 cut(s)	1413
BmsI	GCATC	7 cut(s)	526, 582, 663, 1912, 2191, 2218, 2300
BmuI	ACTGGG	1 cut(s)	1413
BpiI	GAAGAC	3 cut(s)	2, 205, 677
BpmI	CTGGAG	1 cut(s)	279
Bpu14I	TTCGAA	1 cut(s)	495
BpuEI	CTTGAG	1 cut(s)	449
BpuMI	CCSGG	2 cut(s)	1693, 1757
BsaHI	GRCGYC	2 cut(s)	357, 837
BsaJI	CCNNGG	9 cut(s)	108, 1102, 1133, 1340, 1691, 1755, 1790, 1854, 1979
BsaWI	WCCGGW	3 cut(s)	857, 929, 1483
Bse118I	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
Bse1I	ACTGG	5 cut(s)	182, 1046, 1419, 1460, 2270
Bse3DI	GCAATG	1 cut(s)	276
BseBI	CCWGG	4 cut(s)	133, 648, 993, 1342
BseDI	CCNNGG	9 cut(s)	108, 1102, 1133, 1340, 1691, 1755, 1790, 1854, 1979
BseGI	GGATG	5 cut(s)	573, 1231, 1535, 2092, 2185
BseMI	GCAATG	1 cut(s)	276
BseMII	CTCAG	2 cut(s)	421, 593
BseNI	ACTGG	5 cut(s)	182, 1046, 1419, 1460, 2270
BseX3I	CGGCCG	1 cut(s)	733
BseXI	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
BseYI	CCCAGC	2 cut(s)	513, 1033
BsgI	GTGCAG	4 cut(s)	202, 1023, 1452, 1719
Bsh1236I	CGCG	2 cut(s)	1104, 1126
Bsh1285I	CGRYCG	2 cut(s)	736, 2076
BshFI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BshTI	ACCGGT	2 cut(s)	857, 1483
BsiEI	CGRYCG	2 cut(s)	736, 2076
BsiHKAI	GWGCWC	2 cut(s)	200, 450
BsiHKCI	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
BsiSI	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
BslFI	GGGAC	4 cut(s)	347, 1429, 1649, 1712
BsmAI	GTCTC	3 cut(s)	9, 967, 2287
BsmFI	GGGAC	4 cut(s)	347, 1429, 1649, 1712
BsmI	GAATGC	2 cut(s)	642, 987
BsnI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BsoBI	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
Bsp119I	TTCGAA	1 cut(s)	495
Bsp1286I	GDGCHC	3 cut(s)	200, 450, 2238
Bsp143I	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
BspANI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BspCNI	CTCAG	2 cut(s)	420, 592
BspFNI	CGCG	2 cut(s)	1104, 1126
BspLI	GGNNCC	4 cut(s)	156, 502, 563, 939
BspMAI	CTGCAG	1 cut(s)	1058
BspMI	ACCTGC	2 cut(s)	297, 1474
BspPI	GGATC	4 cut(s)	411, 483, 537, 1011
BspQI	GCTCTTC	2 cut(s)	524, 812
BspT104I	TTCGAA	1 cut(s)	495
BsrDI	GCAATG	1 cut(s)	276
BsrFI	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
BsrI	ACTGG	5 cut(s)	182, 1046, 1419, 1460, 2270
BssAI	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
BssECI	CCNNGG	9 cut(s)	108, 1102, 1133, 1340, 1691, 1755, 1790, 1854, 1979
BssMI	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
BssNI	GRCGYC	2 cut(s)	357, 837
BssT1I	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
Bst2UI	CCWGG	4 cut(s)	133, 648, 993, 1342
Bst4CI	ACNGT	3 cut(s)	754, 1605, 1713
Bst6I	CTCTTC	4 cut(s)	332, 524, 812, 1723
BstACI	GRCGYC	2 cut(s)	357, 837
BstAPI	GCANNNNNTGC	1 cut(s)	984
BstBI	TTCGAA	1 cut(s)	495
BstC8I	GCNNGC	8 cut(s)	105, 253, 283, 719, 874, 891, 946, 1061
BstDEI	CTNAG	2 cut(s)	407, 579
BstDSI	CCRYGG	1 cut(s)	1102
BstEII	GGTNACC	1 cut(s)	1695
BstF5I	GGATG	5 cut(s)	573, 1231, 1535, 2092, 2185
BstFNI	CGCG	2 cut(s)	1104, 1126
BstHHI	GCGC	1 cut(s)	1128
BstKTI	GATC	8 cut(s)	406, 478, 532, 687, 732, 1006, 1013, 1510
BstMAI	GTCTC	3 cut(s)	9, 967, 2287
BstMBI	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
BstMCI	CGRYCG	2 cut(s)	736, 2076
BstNI	CCWGG	4 cut(s)	133, 648, 993, 1342
BstNSI	RCATGY	1 cut(s)	667
BstPI	GGTNACC	1 cut(s)	1695
BstSCI	CCNGG	6 cut(s)	131, 646, 991, 1340, 1691, 1755
BstSFI	CTRYAG	1 cut(s)	1054
BstUI	CGCG	2 cut(s)	1104, 1126
BstV1I	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
BstV2I	GAAGAC	3 cut(s)	2, 205, 677
BstX2I	RGATCY	4 cut(s)	403, 475, 529, 1010
BstXI	CCANNNNNNTGG	3 cut(s)	1791, 1887, 1980
BstYI	RGATCY	4 cut(s)	403, 475, 529, 1010
BstZI	CGGCCG	1 cut(s)	733
BsuRI	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
BtgI	CCRYGG	1 cut(s)	1102
BtgZI	GCGATG	1 cut(s)	1197
BtrI	CACGTC	2 cut(s)	193, 1043
BtsCI	GGATG	5 cut(s)	573, 1231, 1535, 2092, 2185
BtsI	GCAGTG	1 cut(s)	948
BtsIMutI	CAGTG	3 cut(s)	948, 1053, 2277
BveI	ACCTGC	2 cut(s)	297, 1474
Cac8I	GCNNGC	8 cut(s)	105, 253, 283, 719, 874, 891, 946, 1061
CaiI	CAGNNNCTG	1 cut(s)	1466
CfoI	GCGC	1 cut(s)	1128
Cfr10I	RCCGGY	6 cut(s)	251, 281, 598, 710, 857, 1483
Cfr13I	GGNCC	2 cut(s)	154, 785
Cfr42I	CCGCGG	1 cut(s)	1105
CseI	GACGC	2 cut(s)	346, 682
Csp6I	GTAC	6 cut(s)	469, 1395, 1457, 1463, 1478, 1714
CspAI	ACCGGT	2 cut(s)	857, 1483
CviAII	CATG	8 cut(s)	205, 395, 664, 1355, 1493, 1661, 1724, 2228
CviQI	GTAC	6 cut(s)	469, 1395, 1457, 1463, 1478, 1714
DdeI	CTNAG	2 cut(s)	407, 579
DpnI	GATC	8 cut(s)	405, 477, 531, 686, 731, 1005, 1012, 1509
DpnII	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
DraIII	CACNNNGTG	1 cut(s)	2231
DrdI	GACNNNNNNGTC	1 cut(s)	1207
DseDI	GACNNNNNNGTC	1 cut(s)	1207
EaeI	YGGCCR	4 cut(s)	618, 733, 1099, 1758
EagI	CGGCCG	1 cut(s)	733
Eam1104I	CTCTTC	4 cut(s)	332, 524, 812, 1723
EarI	CTCTTC	4 cut(s)	332, 524, 812, 1723
EciI	GGCGGA	6 cut(s)	787, 1305, 1695, 1740, 1833, 1929
EclXI	CGGCCG	1 cut(s)	733
Eco130I	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
Eco147I	AGGCCT	1 cut(s)	306
Eco24I	GRGCYC	1 cut(s)	2238
Eco47I	GGWCC	1 cut(s)	154
Eco52I	CGGCCG	1 cut(s)	733
Eco57I	CTGAAG	1 cut(s)	404
Eco88I	CYCGRG	4 cut(s)	1134, 1802, 1898, 1991
Eco91I	GGTNACC	1 cut(s)	1695
EcoO109I	RGGNCCY	1 cut(s)	785
EcoO65I	GGTNACC	1 cut(s)	1695
EcoRI	GAATTC	1 cut(s)	1161
EcoRII	CCWGG	4 cut(s)	131, 646, 991, 1340
EcoT14I	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
EcoT22I	ATGCAT	1 cut(s)	2293
EcoT38I	GRGCYC	1 cut(s)	2238
ErhI	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
FaeI	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2231
FaqI	GGGAC	4 cut(s)	347, 1429, 1649, 1712
FatI	CATG	8 cut(s)	204, 394, 663, 1354, 1492, 1660, 1723, 2227
FauI	CCCGC	4 cut(s)	1100, 1275, 1509, 1858
FauNDI	CATATG	1 cut(s)	2287
FbaI	TGATCA	1 cut(s)	1507
FokI	GGATG	5 cut(s)	560, 1218, 1522, 2079, 2172
FriOI	GRGCYC	1 cut(s)	2238
FspBI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
GlaI	GCGC	1 cut(s)	1127
GsaI	CCCAGC	2 cut(s)	517, 1037
GsuI	CTGGAG	1 cut(s)	279
HaeIII	GGCC	6 cut(s)	306, 620, 735, 786, 1101, 1760
HapII	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
HgaI	GACGC	2 cut(s)	346, 682
HhaI	GCGC	1 cut(s)	1128
Hin1I	GRCGYC	2 cut(s)	357, 837
Hin1II	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2231
Hin6I	GCGC	1 cut(s)	1126
HinP1I	GCGC	1 cut(s)	1126
HindIII	AAGCTT	2 cut(s)	101, 370
HinfI	GANTC	7 cut(s)	77, 210, 583, 852, 1345, 1615, 2280
HpaII	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
Hpy166II	GTNNAC	6 cut(s)	1051, 1489, 1688, 1838, 1934, 2027
Hpy188I	TCNGA	6 cut(s)	154, 190, 316, 582, 590, 1200
Hpy188III	TCNNGA	4 cut(s)	296, 533, 1802, 1898
Hpy8I	GTNNAC	6 cut(s)	1051, 1489, 1688, 1838, 1934, 2027
Hpy99I	CGWCG	4 cut(s)	21, 362, 842, 2209
HpyCH4III	ACNGT	3 cut(s)	754, 1605, 1713
HpyCH4IV	ACGT	3 cut(s)	192, 837, 1042
HpyF3I	CTNAG	2 cut(s)	407, 579
HpySE526I	ACGT	3 cut(s)	192, 837, 1042
Hsp92I	GRCGYC	2 cut(s)	357, 837
Hsp92II	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2231
HspAI	GCGC	1 cut(s)	1126
KroI	GCCGGC	2 cut(s)	251, 281
KroNI	GCCGGC	2 cut(s)	253, 283
Ksp22I	TGATCA	1 cut(s)	1507
KspI	CCGCGG	1 cut(s)	1105
Kzo9I	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
LguI	GCTCTTC	2 cut(s)	524, 812
Lsp1109I	GCAGC	9 cut(s)	49, 52, 55, 375, 701, 1024, 1068, 1912, 2005
LweI	GCATC	7 cut(s)	526, 582, 663, 1912, 2191, 2218, 2300
MaeI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
MaeII	ACGT	3 cut(s)	192, 837, 1042
MaeIII	GTNAC	4 cut(s)	1114, 1227, 1542, 1695
MalI	GATC	8 cut(s)	405, 477, 531, 686, 731, 1005, 1012, 1509
MboI	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
MfeI	CAATTG	1 cut(s)	884
MflI	RGATCY	4 cut(s)	403, 475, 529, 1010
MhlI	GDGCHC	3 cut(s)	200, 450, 2238
MlsI	TGGCCA	1 cut(s)	620
MluCI	AATT	5 cut(s)	86, 884, 1161, 2133, 2310
MluNI	TGGCCA	1 cut(s)	620
MlyI	GAGTC	4 cut(s)	71, 219, 1339, 2289
MmeI	TCCRAC	6 cut(s)	168, 339, 366, 981, 1223, 1643
Mox20I	TGGCCA	1 cut(s)	620
Mph1103I	ATGCAT	1 cut(s)	2293
MroNI	GCCGGC	2 cut(s)	251, 281
MscI	TGGCCA	1 cut(s)	620
MseI	TTAA	1 cut(s)	486
MslI	CAYNNNNRTG	2 cut(s)	1353, 1569
Msp20I	TGGCCA	1 cut(s)	620
MspA1I	CMGCKG	6 cut(s)	1037, 1104, 1475, 1829, 1925, 2018
MspI	CCGG	9 cut(s)	252, 282, 599, 711, 858, 930, 1484, 1693, 1757
MspR9I	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
MunI	CAATTG	1 cut(s)	884
Mva1269I	GAATGC	2 cut(s)	642, 987
MvaI	CCWGG	4 cut(s)	133, 648, 993, 1342
MvnI	CGCG	2 cut(s)	1104, 1126
NaeI	GCCGGC	2 cut(s)	253, 283
NciI	CCSGG	2 cut(s)	1693, 1757
NdeI	CATATG	1 cut(s)	2287
NdeII	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
NgoMIV	GCCGGC	2 cut(s)	251, 281
NlaIII	CATG	8 cut(s)	208, 398, 667, 1358, 1496, 1664, 1727, 2231
NlaIV	GGNNCC	4 cut(s)	156, 502, 563, 939
NmuCI	GTSAC	4 cut(s)	1114, 1227, 1542, 1695
NsiI	ATGCAT	1 cut(s)	2293
NspI	RCATGY	1 cut(s)	667
NspV	TTCGAA	1 cut(s)	495
PceI	AGGCCT	1 cut(s)	306
PciI	ACATGT	1 cut(s)	663
PciSI	GCTCTTC	2 cut(s)	524, 812
PcsI	WCGNNNNNNNCGW	3 cut(s)	13, 189, 501
PctI	GAATGC	2 cut(s)	642, 987
PdiI	GCCGGC	2 cut(s)	253, 283
PfeI	GAWTC	3 cut(s)	583, 852, 1615
PflFI	GACNNNGTC	1 cut(s)	1291
PflMI	CCANNNNNTGG	2 cut(s)	400, 2276
PinAI	ACCGGT	2 cut(s)	857, 1483
PleI	GAGTC	4 cut(s)	71, 218, 1339, 2288
PpsI	GAGTC	4 cut(s)	71, 218, 1339, 2288
PscI	ACATGT	1 cut(s)	663
Psp6I	CCWGG	4 cut(s)	131, 646, 991, 1340
PspEI	GGTNACC	1 cut(s)	1695
PspFI	CCCAGC	2 cut(s)	513, 1033
PspGI	CCWGG	4 cut(s)	131, 646, 991, 1340
PspN4I	GGNNCC	4 cut(s)	156, 502, 563, 939
PspPI	GGNCC	2 cut(s)	154, 785
PstI	CTGCAG	1 cut(s)	1058
PstNI	CAGNNNCTG	1 cut(s)	1466
PsuI	RGATCY	4 cut(s)	403, 475, 529, 1010
PsyI	GACNNNGTC	1 cut(s)	1291
PvuII	CAGCTG	5 cut(s)	1037, 1475, 1829, 1925, 2018
RsaI	GTAC	6 cut(s)	470, 1396, 1458, 1464, 1479, 1715
RsaNI	GTAC	6 cut(s)	469, 1395, 1457, 1463, 1478, 1714
RseI	CAYNNNNRTG	2 cut(s)	1353, 1569
SacII	CCGCGG	1 cut(s)	1105
SapI	GCTCTTC	2 cut(s)	524, 812
SaqAI	TTAA	1 cut(s)	486
Sau3AI	GATC	8 cut(s)	403, 475, 529, 684, 729, 1003, 1010, 1507
Sau96I	GGNCC	2 cut(s)	154, 785
ScaI	AGTACT	2 cut(s)	470, 1715
SchI	GAGTC	4 cut(s)	71, 219, 1339, 2289
ScrFI	CCNGG	6 cut(s)	133, 648, 993, 1342, 1693, 1757
SduI	GDGCHC	3 cut(s)	200, 450, 2238
SfaNI	GCATC	7 cut(s)	526, 582, 663, 1912, 2191, 2218, 2300
SfcI	CTRYAG	1 cut(s)	1054
Sfr303I	CCGCGG	1 cut(s)	1105
SfuI	TTCGAA	1 cut(s)	495
SgrAI	CRCCGGYG	1 cut(s)	857
SgrBI	CCGCGG	1 cut(s)	1105
SinI	GGWCC	1 cut(s)	154
SmiMI	CAYNNNNRTG	2 cut(s)	1353, 1569
SmlI	CTYRAG	1 cut(s)	464
SmoI	CTYRAG	1 cut(s)	464
SpeI	ACTAGT	1 cut(s)	1453
Sse9I	AATT	5 cut(s)	86, 884, 1161, 2133, 2310
SseBI	AGGCCT	1 cut(s)	306
SspMI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
StuI	AGGCCT	1 cut(s)	306
StyD4I	CCNGG	6 cut(s)	131, 646, 991, 1340, 1691, 1755
StyI	CCWWGG	4 cut(s)	108, 1790, 1854, 1979
TaaI	ACNGT	3 cut(s)	754, 1605, 1713
TaiI	ACGT	3 cut(s)	195, 840, 1045
TaqI	TCGA	5 cut(s)	173, 495, 522, 534, 1424
TaqII	GACCGA	1 cut(s)	2090
TasI	AATT	5 cut(s)	86, 884, 1161, 2133, 2310
TatI	WGTACW	2 cut(s)	468, 1713
TfiI	GAWTC	3 cut(s)	583, 852, 1615
Tru1I	TTAA	1 cut(s)	486
Tru9I	TTAA	1 cut(s)	486
TscAI	CASTG	3 cut(s)	955, 1053, 2277
TseFI	GTSAC	4 cut(s)	1114, 1227, 1542, 1695
TseI	GCWGC	9 cut(s)	62, 65, 68, 388, 714, 1037, 1056, 1925, 2018
Tsp45I	GTSAC	4 cut(s)	1114, 1227, 1542, 1695
TspDTI	ATGAA	3 cut(s)	830, 1343, 1779
TspGWI	ACGGA	2 cut(s)	470, 493
TspRI	CASTG	3 cut(s)	955, 1053, 2277
Tth111I	GACNNNGTC	1 cut(s)	1291
Van91I	CCANNNNNTGG	2 cut(s)	400, 2276
VpaK11BI	GGWCC	1 cut(s)	154
XapI	RAATTY	2 cut(s)	86, 1161
XceI	RCATGY	1 cut(s)	667
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1884
XspI	CTAG	5 cut(s)	302, 1224, 1403, 1454, 1929
ZraI	GACGTC	1 cut(s)	838
ZrmI	AGTACT	2 cut(s)	470, 1715
Zsp2I	ATGCAT	1 cut(s)	2293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.