Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0017485

Physical Location & Seq

Genomic Coordinates Forward (+)

66346 .. 69525

Gene Structure 3180 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG000400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGTCTCGTCTTCTTCGTCGTCTGTCTTTCTTGCTCCTCCTCCTCCTCAACCTCCACATCTGCTACGCTGCTGCTGCTGATGACTCACTCAAATTTGAGAACCCAAGGCTTGCCAAGGCTTACACCGCCCTCCAAGCCTGGAAGTCTGCCATCTTCTCGGACCCATTCAACTTCACCTCGAACTGGAACGGGTCGGACGTGTGCTCCTACATGGGAGTCTTCTGCACCGCCCTTCCCTCAATCGGGCGTGTTGTCGCCGGCATTGACCTCAACCACGCTGACATTGCCGGCTACCTGCCTCCAGAGCTAGGCCTCCTCTCCGACCTCGCTCTCTTACACATCAACTCCAACCGCTTCTGCGGCGTCGTCCCCACAAGCTTTCGGCGACTGAAGCTGCTCCATGAGCTGGATCTCAGCAACAACCGCTTTGTGGGGAACTTCCCCAAAGTGGTGCTCTCTTTGCCATCCCTCAAGTACTTGGATCTCCGTTTTAACGAGTTCGAAGGCTCCGTTCCTTCCCAGCTCTTCGACAAGGATCTCGATGCCATTTTCCTCAACGACAACAGGTTCCACTTCGGCATCCCTCAGAATCTCGGAAACTCGCCGGTTTCGGTGCTGGTGTTGGCCAACAATAATCTTGGGGGTTGCATTCCAGGTAGCATCGGCAACATGTGGAAGACGCTCAACGAGATCATTCTGTTGAATGACAATCTCACCGGCTGCTTGCCTCCCCAGATCGGCCGCCTACGCAATCTCACCGTCTTTGATGTGAGCTTCAACCAGCTTCAAGGCCCTCTGCCCTCCGCCTCCATAGCCAAAATGAAGAGCTTGGAGGAGCTGGACGTCGCCCATAACAGATTCACCGGTGTAATACCAGCCAGCATTTGCCAATTGCCAGCCTTGCACAACTTCACCTATTCCTTCAACTACTTCACCGGAGAGGCTCCTGCTTGCACTGCAACTCCTGTCTCTCATAATGGTAGCAAGAACTGCATTCCTGGCAAGTTAGATCAAAGATCTACAAGGGAATGTGCTTCCCCAGCTGCACGTCCCGTGGACTGCAGCAAACTCAAATGCGGAGGTGGCGGTGGCGGTGGCCGCGGCGGGTCTGTCACAAAGCCGCGCCCTCCTCGGGCTTCAACACCTCCATCGCAAAGAATTCCTGTTCCTAAAGTTGCTCCTCCACCCCCTCCGACTTCAAAGTCATCGCCTTCCACTAGATCACATCCTCCACCGCCAATATCAACATCAACATCACCCCCGCCTTCTTCACCTTCACCTTCACCTTCACCTTCACCGACCAAGTCAAAGCCGCCTTCACCTCCTCCACCACCTACTGAAAAAGTATCACCCAGGACTCATCTTCATGTTCCTCCACCCCCACCGACCCAAAAGGTATCACCAAGTACCCATCTAGCTCCACCTCCCCCCAGTTCGACCCATTTCAACTATTCGTCCCCACCACTAGTACCAGTACCTGCACCAGCTGTACCACCGGTTTACCATGCCTCCCCGCCTGATCATCACTCTCATATAGTGCCTCCATCATCCCCGTCACCATCACCACCACCACCAAGTTATCATTCTTATGCTTCACCACCACCGCCGCCGCCTCCACAACAGTCTGTTGAGATTCCAACTCCTGCCCCACCATCACCACAACACTACTACTCACCTCATGTCCCACCAACAGAAGCTCCAAGCTACCAACATTCTTACAGTTCACCACCTCCACCCCCGTCACCGCCTCCGCCACAGTACTCTTCCCATGTCCCATCTCCAAACTATCATCATAGTCCGGGTTACACTTCACCTCCTCCACCTCCGCCCCCGGCCAATGAACATTATACAAAAGCACCACCACCTTGGCACACTCCCGAGCATTATTCCCCACCCAAAACAGCTGATAGTCCACCTCCGCCCCCGGCCAAGGAACATTATACAAATGCACCACCACCTTGGCACACGCCCGAGCATTATTCACCACCCAAAACAGTTGCAAGTCCACCTCCCCCTCCCCCATCAGCTCCTATTTCACCGACCGAGCCATCACCTTCCCATCCTCTGCCGCCCATAGGCTGTATCATTCCAGCACCAATTCTGCCACCTCCACCAAGCCATCACCACTCACCTCCTCAACAATGGCATCATCCACCACCACCGTCATCGTCGCATCAACAACCTCCTCCACATGGAATTGAGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0005198 GO:0005199 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0007275 GO:0008150 GO:0009505 GO:0009506 GO:0009653 GO:0009826 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016043 GO:0016049 GO:0022622 GO:0030054 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044464 GO:0048364 GO:0048468 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0055044 GO:0060560 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8

Protein Analysis

735

Amino Acids

78.7

Weight (kDa)

8.79

Isoelectric Point (pI)

90.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	42 - 76	2.9e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	109 - 166	2.9e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62440
fragaria_vesca	FvH4_4g00070
malus_domestica	MD04G1000500.v1.1
prunus_persica	Prupe.1G000500_v2.0.a1
rosa_laevigata	RLG00000010279
rosa_multiflora	Rmu_sc0006822.1_g000025
rosa_roxburghii	Rroxscaffold_5G00332680
rosa_rugosa	Rorug03G0296900
rosa_samantha	Rh4BG000400 Rh4CG000300 Rh4DG000400
rosa_wichuraiana	Rw4G000850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1201
AatII	GACGTC	1 cut(s)	846
Acc36I	ACCTGC	2 cut(s)	303, 1486
AccB7I	CCANNNNNTGG	1 cut(s)	406
AccII	CGCG	2 cut(s)	1101, 1123
AclWI	GGATC	3 cut(s)	417, 489, 543
AcoI	YGGCCR	5 cut(s)	624, 739, 1096, 1833, 1926
AcsI	RAATTY	2 cut(s)	92, 1158
AcuI	CTGAAG	1 cut(s)	410
AcyI	GRCGYC	2 cut(s)	363, 843
AfaI	GTAC	6 cut(s)	476, 1408, 1470, 1476, 1491, 1760
AflIII	ACRYGT	2 cut(s)	198, 669
AgeI	ACCGGT	2 cut(s)	863, 1495
AgsI	TTSAA	8 cut(s)	169, 703, 778, 788, 925, 1140, 1200, 1447
AhlI	ACTAGT	1 cut(s)	1465
AjiI	CACGTC	2 cut(s)	199, 1049
AjnI	CCWGG	4 cut(s)	137, 652, 997, 1352
AjuI	GAANNNNNNNTTGG	2 cut(s)	1567, 1599
Alw21I	GWGCWC	2 cut(s)	206, 456
Alw26I	GTCTC	2 cut(s)	9, 973
AlwI	GGATC	3 cut(s)	417, 489, 543
AlwNI	CAGNNNCTG	1 cut(s)	1478
Ama87I	CYCGRG	3 cut(s)	1131, 1877, 1970
AoxI	GGCC	7 cut(s)	310, 624, 739, 790, 1096, 1833, 1926
ApeKI	GCWGC	7 cut(s)	68, 71, 74, 394, 720, 1043, 1062
ApoI	RAATTY	2 cut(s)	92, 1158
AsiGI	ACCGGT	2 cut(s)	863, 1495
AspLEI	GCGC	1 cut(s)	1125
AspS9I	GGNCC	2 cut(s)	160, 791
AsuC2I	CCSGG	3 cut(s)	1800, 1832, 1925
AsuII	TTCGAA	1 cut(s)	501
AvaI	CYCGRG	3 cut(s)	1131, 1877, 1970
AvaII	GGWCC	1 cut(s)	160
BalI	TGGCCA	1 cut(s)	626
BbsI	GAAGAC	3 cut(s)	2, 211, 683
Bbv12I	GWGCWC	2 cut(s)	206, 456
BbvI	GCAGC	7 cut(s)	55, 58, 61, 381, 707, 1030, 1074
BciT130I	CCWGG	4 cut(s)	139, 654, 999, 1354
BclI	TGATCA	1 cut(s)	1519
BcnI	CCSGG	3 cut(s)	1800, 1832, 1925
BcoDI	GTCTC	2 cut(s)	9, 973
BcuI	ACTAGT	1 cut(s)	1465
BfaI	CTAG	4 cut(s)	308, 1218, 1415, 1466
BfmI	CTRYAG	1 cut(s)	1060
BfuAI	ACCTGC	2 cut(s)	303, 1486
BglII	AGATCT	1 cut(s)	1016
BmcAI	AGTACT	2 cut(s)	476, 1760
Bme1390I	CCNGG	7 cut(s)	139, 654, 999, 1354, 1800, 1832, 1925
Bme18I	GGWCC	1 cut(s)	160
BmeT110I	CYCGRG	3 cut(s)	1131, 1877, 1970
BmgBI	CACGTC	2 cut(s)	199, 1049
BmgT120I	GGNCC	2 cut(s)	160, 791
BmiI	GGNNCC	4 cut(s)	162, 508, 569, 945
BmrFI	CCNGG	7 cut(s)	139, 654, 999, 1354, 1800, 1832, 1925
BmrI	ACTGGG	1 cut(s)	1425
BmsI	GCATC	5 cut(s)	532, 588, 669, 2155, 2182
BmuI	ACTGGG	1 cut(s)	1425
BpiI	GAAGAC	3 cut(s)	2, 211, 683
BpmI	CTGGAG	1 cut(s)	285
Bpu14I	TTCGAA	1 cut(s)	501
BpuEI	CTTGAG	1 cut(s)	455
BpuMI	CCSGG	3 cut(s)	1800, 1832, 1925
BsaHI	GRCGYC	2 cut(s)	363, 843
BsaWI	WCCGGW	3 cut(s)	863, 935, 1495
Bse118I	RCCGGY	6 cut(s)	257, 287, 604, 716, 863, 1495
Bse1I	ACTGG	3 cut(s)	188, 1431, 1472
Bse3DI	GCAATG	1 cut(s)	282
BseBI	CCWGG	4 cut(s)	139, 654, 999, 1354
BseGI	GGATG	6 cut(s)	464, 579, 1225, 1547, 2059, 2149
BseMI	GCAATG	1 cut(s)	282
BseMII	CTCAG	2 cut(s)	427, 599
BseNI	ACTGG	3 cut(s)	188, 1431, 1472
BseX3I	CGGCCG	1 cut(s)	739
BseXI	GCAGC	7 cut(s)	55, 58, 61, 381, 707, 1030, 1074
BseYI	CCCAGC	2 cut(s)	519, 1039
BsgI	GTGCAG	3 cut(s)	208, 1029, 1464
Bsh1236I	CGCG	2 cut(s)	1101, 1123
Bsh1285I	CGRYCG	2 cut(s)	742, 2043
BshFI	GGCC	7 cut(s)	312, 626, 741, 792, 1098, 1835, 1928
BshTI	ACCGGT	2 cut(s)	863, 1495
BsiEI	CGRYCG	2 cut(s)	742, 2043
BsiHKAI	GWGCWC	2 cut(s)	206, 456
BsiHKCI	CYCGRG	3 cut(s)	1131, 1877, 1970
BslFI	GGGAC	5 cut(s)	353, 1035, 1441, 1667, 1757
BsmAI	GTCTC	2 cut(s)	9, 973
BsmFI	GGGAC	5 cut(s)	353, 1035, 1441, 1667, 1757
BsmI	GAATGC	2 cut(s)	648, 993
BsnI	GGCC	7 cut(s)	312, 626, 741, 792, 1098, 1835, 1928
BsoBI	CYCGRG	3 cut(s)	1131, 1877, 1970
Bsp119I	TTCGAA	1 cut(s)	501
Bsp1286I	GDGCHC	2 cut(s)	206, 456
Bsp143I	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
BspANI	GGCC	7 cut(s)	312, 626, 741, 792, 1098, 1835, 1928
BspCNI	CTCAG	2 cut(s)	426, 598
BspFNI	CGCG	2 cut(s)	1101, 1123
BspLI	GGNNCC	4 cut(s)	162, 508, 569, 945
BspMAI	CTGCAG	1 cut(s)	1064
BspMI	ACCTGC	2 cut(s)	303, 1486
BspPI	GGATC	3 cut(s)	417, 489, 543
BspQI	GCTCTTC	2 cut(s)	530, 818
BspT104I	TTCGAA	1 cut(s)	501
BsrDI	GCAATG	1 cut(s)	282
BsrFI	RCCGGY	6 cut(s)	257, 287, 604, 716, 863, 1495
BsrI	ACTGG	3 cut(s)	188, 1431, 1472
BssAI	RCCGGY	6 cut(s)	257, 287, 604, 716, 863, 1495
BssMI	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
BssNI	GRCGYC	2 cut(s)	363, 843
BssT1I	CCWWGG	5 cut(s)	104, 114, 1865, 1929, 1958
Bst2UI	CCWGG	4 cut(s)	139, 654, 999, 1354
Bst4CI	ACNGT	6 cut(s)	760, 1623, 1721, 1758, 1996, 2163
Bst6I	CTCTTC	3 cut(s)	530, 818, 1768
BstACI	GRCGYC	2 cut(s)	363, 843
BstAPI	GCANNNNNTGC	1 cut(s)	990
BstBI	TTCGAA	1 cut(s)	501
BstC8I	GCNNGC	7 cut(s)	111, 259, 289, 725, 880, 897, 952
BstDEI	CTNAG	2 cut(s)	413, 585
BstDSI	CCRYGG	2 cut(s)	1053, 1099
BstF5I	GGATG	6 cut(s)	464, 579, 1225, 1547, 2059, 2149
BstFNI	CGCG	2 cut(s)	1101, 1123
BstHHI	GCGC	1 cut(s)	1125
BstKTI	GATC	9 cut(s)	412, 484, 538, 693, 738, 1012, 1019, 1223, 1522
BstMAI	GTCTC	2 cut(s)	9, 973
BstMBI	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
BstMCI	CGRYCG	2 cut(s)	742, 2043
BstNI	CCWGG	4 cut(s)	139, 654, 999, 1354
BstNSI	RCATGY	1 cut(s)	673
BstSCI	CCNGG	7 cut(s)	137, 652, 997, 1352, 1798, 1830, 1923
BstSFI	CTRYAG	1 cut(s)	1060
BstUI	CGCG	2 cut(s)	1101, 1123
BstV1I	GCAGC	7 cut(s)	55, 58, 61, 381, 707, 1030, 1074
BstV2I	GAAGAC	3 cut(s)	2, 211, 683
BstX2I	RGATCY	4 cut(s)	409, 481, 535, 1016
BstXI	CCANNNNNNTGG	2 cut(s)	1866, 1959
BstYI	RGATCY	4 cut(s)	409, 481, 535, 1016
BstZI	CGGCCG	1 cut(s)	739
BsuRI	GGCC	7 cut(s)	312, 626, 741, 792, 1098, 1835, 1928
BtgI	CCRYGG	2 cut(s)	1053, 1099
BtgZI	GCGATG	2 cut(s)	1134, 1191
BtrI	CACGTC	2 cut(s)	199, 1049
BtsCI	GGATG	6 cut(s)	464, 579, 1225, 1547, 2059, 2149
BtsI	GCAGTG	1 cut(s)	954
BtsIMutI	CAGTG	1 cut(s)	954
BveI	ACCTGC	2 cut(s)	303, 1486
Cac8I	GCNNGC	7 cut(s)	111, 259, 289, 725, 880, 897, 952
CaiI	CAGNNNCTG	1 cut(s)	1478
CfoI	GCGC	1 cut(s)	1125
Cfr10I	RCCGGY	6 cut(s)	257, 287, 604, 716, 863, 1495
Cfr13I	GGNCC	2 cut(s)	160, 791
Cfr42I	CCGCGG	1 cut(s)	1102
CseI	GACGC	2 cut(s)	352, 688
Csp6I	GTAC	6 cut(s)	475, 1407, 1469, 1475, 1490, 1759
CspAI	ACCGGT	2 cut(s)	863, 1495
CviAII	CATG	8 cut(s)	211, 401, 670, 1367, 1505, 1679, 1769, 2192
CviQI	GTAC	6 cut(s)	475, 1407, 1469, 1475, 1490, 1759
DdeI	CTNAG	2 cut(s)	413, 585
DpnI	GATC	9 cut(s)	411, 483, 537, 692, 737, 1011, 1018, 1222, 1521
DpnII	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
DrdI	GACNNNNNNGTC	1 cut(s)	1201
DseDI	GACNNNNNNGTC	1 cut(s)	1201
EaeI	YGGCCR	5 cut(s)	624, 739, 1096, 1833, 1926
EagI	CGGCCG	1 cut(s)	739
Eam1104I	CTCTTC	3 cut(s)	530, 818, 1768
EarI	CTCTTC	3 cut(s)	530, 818, 1768
EciI	GGCGGA	4 cut(s)	793, 1740, 1815, 1908
EclXI	CGGCCG	1 cut(s)	739
Eco130I	CCWWGG	5 cut(s)	104, 114, 1865, 1929, 1958
Eco147I	AGGCCT	1 cut(s)	312
Eco47I	GGWCC	1 cut(s)	160
Eco52I	CGGCCG	1 cut(s)	739
Eco57I	CTGAAG	1 cut(s)	410
Eco88I	CYCGRG	3 cut(s)	1131, 1877, 1970
EcoO109I	RGGNCCY	1 cut(s)	791
EcoRI	GAATTC	1 cut(s)	1158
EcoRII	CCWGG	4 cut(s)	137, 652, 997, 1352
EcoT14I	CCWWGG	5 cut(s)	104, 114, 1865, 1929, 1958
ErhI	CCWWGG	5 cut(s)	104, 114, 1865, 1929, 1958
FaeI	CATG	8 cut(s)	214, 404, 673, 1370, 1508, 1682, 1772, 2195
FaqI	GGGAC	5 cut(s)	353, 1035, 1441, 1667, 1757
FatI	CATG	8 cut(s)	210, 400, 669, 1366, 1504, 1678, 1768, 2191
FauI	CCCGC	3 cut(s)	1097, 1269, 1521
FbaI	TGATCA	1 cut(s)	1519
FokI	GGATG	6 cut(s)	451, 566, 1212, 1534, 2046, 2136
FspBI	CTAG	4 cut(s)	308, 1218, 1415, 1466
GlaI	GCGC	1 cut(s)	1124
GsaI	CCCAGC	2 cut(s)	523, 1043
GsuI	CTGGAG	1 cut(s)	285
HaeIII	GGCC	7 cut(s)	312, 626, 741, 792, 1098, 1835, 1928
HgaI	GACGC	2 cut(s)	352, 688
HhaI	GCGC	1 cut(s)	1125
Hin1I	GRCGYC	2 cut(s)	363, 843
Hin1II	CATG	8 cut(s)	214, 404, 673, 1370, 1508, 1682, 1772, 2195
Hin6I	GCGC	1 cut(s)	1123
HinP1I	GCGC	1 cut(s)	1123
HindIII	AAGCTT	1 cut(s)	376
HinfI	GANTC	6 cut(s)	83, 216, 589, 858, 1357, 1633
Hpy166II	GTNNAC	5 cut(s)	1057, 1501, 1724, 1913, 2006
Hpy188I	TCNGA	6 cut(s)	160, 196, 322, 588, 596, 1194
Hpy188III	TCNNGA	3 cut(s)	302, 539, 1877
Hpy8I	GTNNAC	5 cut(s)	1057, 1501, 1724, 1913, 2006
Hpy99I	CGWCG	4 cut(s)	21, 368, 848, 2173
HpyCH4III	ACNGT	6 cut(s)	760, 1623, 1721, 1758, 1996, 2163
HpyCH4IV	ACGT	3 cut(s)	198, 843, 1048
HpyF3I	CTNAG	2 cut(s)	413, 585
HpySE526I	ACGT	3 cut(s)	198, 843, 1048
Hsp92I	GRCGYC	2 cut(s)	363, 843
Hsp92II	CATG	8 cut(s)	214, 404, 673, 1370, 1508, 1682, 1772, 2195
HspAI	GCGC	1 cut(s)	1123
KroI	GCCGGC	2 cut(s)	257, 287
KroNI	GCCGGC	2 cut(s)	259, 289
Ksp22I	TGATCA	1 cut(s)	1519
KspI	CCGCGG	1 cut(s)	1102
Kzo9I	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
LguI	GCTCTTC	2 cut(s)	530, 818
Lsp1109I	GCAGC	7 cut(s)	55, 58, 61, 381, 707, 1030, 1074
LweI	GCATC	5 cut(s)	532, 588, 669, 2155, 2182
MaeI	CTAG	4 cut(s)	308, 1218, 1415, 1466
MaeII	ACGT	3 cut(s)	198, 843, 1048
MaeIII	GTNAC	4 cut(s)	1111, 1554, 1740, 1802
MalI	GATC	9 cut(s)	411, 483, 537, 692, 737, 1011, 1018, 1222, 1521
MboI	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
MboII	GAAGA	9 cut(s)	5, 145, 211, 517, 688, 835, 1260, 1355, 1755
MfeI	CAATTG	1 cut(s)	890
MflI	RGATCY	4 cut(s)	409, 481, 535, 1016
MhlI	GDGCHC	2 cut(s)	206, 456
MlsI	TGGCCA	1 cut(s)	626
MluCI	AATT	5 cut(s)	92, 890, 1158, 2097, 2196
MluNI	TGGCCA	1 cut(s)	626
MlyI	GAGTC	3 cut(s)	77, 225, 1351
MmeI	TCCRAC	5 cut(s)	174, 345, 372, 1217, 1661
Mox20I	TGGCCA	1 cut(s)	626
MroNI	GCCGGC	2 cut(s)	257, 287
MscI	TGGCCA	1 cut(s)	626
MseI	TTAA	2 cut(s)	492, 2206
MslI	CAYNNNNRTG	2 cut(s)	1365, 1587
Msp20I	TGGCCA	1 cut(s)	626
MspA1I	CMGCKG	4 cut(s)	1043, 1101, 1487, 1904
MspR9I	CCNGG	7 cut(s)	139, 654, 999, 1354, 1800, 1832, 1925
MunI	CAATTG	1 cut(s)	890
Mva1269I	GAATGC	2 cut(s)	648, 993
MvaI	CCWGG	4 cut(s)	139, 654, 999, 1354
MvnI	CGCG	2 cut(s)	1101, 1123
NaeI	GCCGGC	2 cut(s)	259, 289
NciI	CCSGG	3 cut(s)	1800, 1832, 1925
NdeII	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
NgoMIV	GCCGGC	2 cut(s)	257, 287
NlaIII	CATG	8 cut(s)	214, 404, 673, 1370, 1508, 1682, 1772, 2195
NlaIV	GGNNCC	4 cut(s)	162, 508, 569, 945
NmuCI	GTSAC	3 cut(s)	1111, 1554, 1740
NspI	RCATGY	1 cut(s)	673
NspV	TTCGAA	1 cut(s)	501
PceI	AGGCCT	1 cut(s)	312
PciI	ACATGT	1 cut(s)	669
PciSI	GCTCTTC	2 cut(s)	530, 818
PcsI	WCGNNNNNNNCGW	3 cut(s)	13, 195, 507
PctI	GAATGC	2 cut(s)	648, 993
PdiI	GCCGGC	2 cut(s)	259, 289
PfeI	GAWTC	3 cut(s)	589, 858, 1633
PflFI	GACNNNGTC	1 cut(s)	1303
PflMI	CCANNNNNTGG	1 cut(s)	406
PinAI	ACCGGT	2 cut(s)	863, 1495
PleI	GAGTC	3 cut(s)	77, 224, 1351
PpsI	GAGTC	3 cut(s)	77, 224, 1351
PscI	ACATGT	1 cut(s)	669
Psp6I	CCWGG	4 cut(s)	137, 652, 997, 1352
PspFI	CCCAGC	2 cut(s)	519, 1039
PspGI	CCWGG	4 cut(s)	137, 652, 997, 1352
PspN4I	GGNNCC	4 cut(s)	162, 508, 569, 945
PspPI	GGNCC	2 cut(s)	160, 791
PstI	CTGCAG	1 cut(s)	1064
PstNI	CAGNNNCTG	1 cut(s)	1478
PsuI	RGATCY	4 cut(s)	409, 481, 535, 1016
PsyI	GACNNNGTC	1 cut(s)	1303
PvuII	CAGCTG	3 cut(s)	1043, 1487, 1904
RsaI	GTAC	6 cut(s)	476, 1408, 1470, 1476, 1491, 1760
RsaNI	GTAC	6 cut(s)	475, 1407, 1469, 1475, 1490, 1759
RseI	CAYNNNNRTG	2 cut(s)	1365, 1587
SacII	CCGCGG	1 cut(s)	1102
SapI	GCTCTTC	2 cut(s)	530, 818
SaqAI	TTAA	2 cut(s)	492, 2206
Sau3AI	GATC	9 cut(s)	409, 481, 535, 690, 735, 1009, 1016, 1220, 1519
Sau96I	GGNCC	2 cut(s)	160, 791
ScaI	AGTACT	2 cut(s)	476, 1760
SchI	GAGTC	3 cut(s)	77, 225, 1351
ScrFI	CCNGG	7 cut(s)	139, 654, 999, 1354, 1800, 1832, 1925
SduI	GDGCHC	2 cut(s)	206, 456
SfaNI	GCATC	5 cut(s)	532, 588, 669, 2155, 2182
SfcI	CTRYAG	1 cut(s)	1060
Sfr303I	CCGCGG	1 cut(s)	1102
SfuI	TTCGAA	1 cut(s)	501
SgrAI	CRCCGGYG	1 cut(s)	863
SgrBI	CCGCGG	1 cut(s)	1102
SinI	GGWCC	1 cut(s)	160
SmiMI	CAYNNNNRTG	2 cut(s)	1365, 1587
SmlI	CTYRAG	1 cut(s)	470
SmoI	CTYRAG	1 cut(s)	470
SpeI	ACTAGT	1 cut(s)	1465
Sse9I	AATT	5 cut(s)	92, 890, 1158, 2097, 2196
SseBI	AGGCCT	1 cut(s)	312
SspMI	CTAG	4 cut(s)	308, 1218, 1415, 1466
StuI	AGGCCT	1 cut(s)	312
StyD4I	CCNGG	7 cut(s)	137, 652, 997, 1352, 1798, 1830, 1923
StyI	CCWWGG	5 cut(s)	104, 114, 1865, 1929, 1958
TaaI	ACNGT	6 cut(s)	760, 1623, 1721, 1758, 1996, 2163
TaiI	ACGT	3 cut(s)	201, 846, 1051
TaqI	TCGA	5 cut(s)	179, 501, 528, 540, 1436
TaqII	GACCGA	1 cut(s)	2057
TasI	AATT	5 cut(s)	92, 890, 1158, 2097, 2196
TatI	WGTACW	2 cut(s)	474, 1758
TauI	GCSGC	9 cut(s)	363, 744, 1101, 1104, 1123, 1315, 1609, 1612, 2071
TfiI	GAWTC	3 cut(s)	589, 858, 1633
Tru1I	TTAA	2 cut(s)	492, 2206
Tru9I	TTAA	2 cut(s)	492, 2206
TscAI	CASTG	1 cut(s)	961
TseFI	GTSAC	3 cut(s)	1111, 1554, 1740
TseI	GCWGC	7 cut(s)	68, 71, 74, 394, 720, 1043, 1062
Tsp45I	GTSAC	3 cut(s)	1111, 1554, 1740
TspDTI	ATGAA	3 cut(s)	836, 1355, 1854
TspGWI	ACGGA	2 cut(s)	476, 499
TspRI	CASTG	1 cut(s)	961
Tth111I	GACNNNGTC	1 cut(s)	1303
Van91I	CCANNNNNTGG	1 cut(s)	406
VpaK11BI	GGWCC	1 cut(s)	160
XapI	RAATTY	2 cut(s)	92, 1158
XceI	RCATGY	1 cut(s)	673
XspI	CTAG	4 cut(s)	308, 1218, 1415, 1466
ZraI	GACGTC	1 cut(s)	844
ZrmI	AGTACT	2 cut(s)	476, 1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.