Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007103.1

Orthogroup ID

OG0007514

Physical Location & Seq

Genomic Coordinates Forward (+)

55682 .. 61866

Gene Structure 6185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007103.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

atgagacttcgccggagccggtcaccggtcgccggaatccggccaactttcaccggaatccggtcacaggccgccggattccggccaactttcgccggattcctgtcgcctgctgcctctcaccggacttttcaaaaacctcaccggaaatgtgtattacccaatagaggggcaatagagtttctgcaaaattcagacctcgctggaaagtgtggccggagaatgagggcgaattcgacgaagaagtcgcggttatcgggaaatccttgccggaggagaaggcggcactgcgagagagactccaccgacaatgatctgcaatctgagcccatctccgtcgtcggagctctgaagcagctcgccggagaaggtggcaacatagattcaggccaagggaggagatgcaggaggccgccggcgtcgactttctggtctagatggaggtgggatggcgacagggactgtgagctccgcgaacgattggagacggcgaggtactcaagaagggtgagatggcccaaagtcgagctcttggtgcaccagacagtcctgtggctccgattctccgactggaaccctttttgcgccgtgacgctgaaggcgaaggcagtgctggtcgacggtgtctatcgagtggaggagaacgagaaggagttggaccaggtgattgggtggaaatgtgccgctgagccggagaagctgatggcagcagagtggagggttttagaggaggctacatatgttgattctgagagacccagaaatcagtccgaatcagacccagaaatcggtcttgccttctcccatttcttcgtcgtcttcaacctcctcagtggcctctccggcaagggcattagagtgataatttgttgtgaggaaatcagcgaagtcggtgagcaaaaccagaacagtgaggatcggagcctacctgactcttttgagtgttcccagaacatggctcttctcaactccgtttgtgttgtgtttgttcttgtttctcaaatatttgcattgagtttagttgattatgtaagcaccgcctcagaggaatacttatcagcactgggagacccgggaatgaagaacccaaatgttagagttgcgttggaagcttggaacttctgcaatgaagttggagttgaagaacccaacatgagcagccccaggttggcttattgtgctgatctctcttgcccacttataaccggaattgacagtaagtgtgtgattcatcacagagtaaatgaatcagacaacaacttaagggcaggtgataagtttcctgtaacggattttaagccatacacaaaccctgacttgtatgcaccgcaaaaggaactatatcttggttctttatgtgaggtgcatgattcatcagatccttggcagttttggatgatcatgcttaagaatgggaattttgacaagaacactactctttgtcctgaaaatggtaagcaggtgagtagaattgtaacttataggaactttccatgttttggtccaggttgtatgaatcagccacttgtctaccatagttactcaagattggtttctaatgcgaaccaaatgccatcagtagttggagggttttatggaacttatgatcttgatgccgatttaagcaaaggtattgggcagaactcctatttttcagtctcatgggagaaagacttgagcactggaagttggattttctcaaagagattgacaacatctgcgaagtatccttggctaatgttgtatctacgttcagatgcaacaaaaggacctaatggtggttatcactacgatggccgtggcatgatgaaaaagttgccagtctctccaaattttaaagtaagattgagacttaatgttaaacgaggaggagggtccaacagtcaattttatcttcttgatataggaagctgttggaagaacaatggaaaaccatgcgacggtaatgttttgacagatgtgactagatatagtgaaatgataataaacccagcaactacaaactggtgccgaccagatctctccagccggttgtacttctaccaggacccaggaacagaacctgcaaagcgcgtatggtcttcaatcaatgttggtacagaaatatatgtcagtagcgcaggagagactgcagaatggactgtaagtgagtttgatgtactagttcctcaaggtgttgaagatgatgattcaagctcctactgtaaccacccattatgtggtggggcaaagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

744

Amino Acids

83.71

Weight (kDa)

8.28

Isoelectric Point (pI)

50.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007514)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g32760
malus_domestica	MD15G1400500.v1.1
prunus_persica	Prupe.1G548100_v2.0.a1
pyrus_communis	pycom15g35910
rosa_chinensis	RchiOBHm_Chr7g0230431 RchiOBHm_Chr7g0230451
rosa_laevigata	RLG00000001493 RLG00000001495
rosa_multiflora	Rmu_sc0002541.1_g000025 Rmu_sc0002541.1_g000027 Rmu_sc0007103.1_g000011 Rmu_sc0007103.1_g000013
rosa_roxburghii	Rroxscaffold_3G00230150 Rroxscaffold_3G00230160
rosa_rugosa	Rorug07G0260500
rosa_samantha	Rh7AG411100 Rh7AG411600 Rh7AG411800 Rh7BG389700 Rh7CG429200 Rh7CG429300 Rh7DG407700 Rh7DG407900
rosa_wichuraiana	Rw7G034120 Rw7G034140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1202
AarI	CACCTGC	2 cut(s)	1259, 1450
AasI	GACNNNNNNGTC	2 cut(s)	244, 430
Acc36I	ACCTGC	3 cut(s)	1259, 1450, 2071
AccB1I	GGYRCC	1 cut(s)	2007
AccB7I	CCANNNNNTGG	3 cut(s)	955, 1499, 2219
AccI	GTMKAC	3 cut(s)	422, 618, 1530
AccII	CGCG	3 cut(s)	250, 474, 2073
AciI	CCGC	8 cut(s)	72, 250, 283, 413, 472, 684, 1038, 1328
AclWI	GGATC	2 cut(s)	924, 1373
AcoI	YGGCCR	4 cut(s)	41, 83, 214, 1795
AcsI	RAATTY	4 cut(s)	190, 232, 1417, 1831
AcuI	CTGAAG	2 cut(s)	371, 617
AcyI	GRCGYC	1 cut(s)	419
AfaI	GTAC	4 cut(s)	497, 2036, 2098, 2160
AflII	CTTAAG	2 cut(s)	1261, 1406
AgeI	ACCGGT	1 cut(s)	25
AgsI	TTSAA	6 cut(s)	134, 823, 1142, 2085, 2180, 2193
AhlI	ACTAGT	1 cut(s)	2161
AjnI	CCWGG	5 cut(s)	660, 1163, 1504, 2043, 2050
AjuI	GAANNNNNNNTTGG	2 cut(s)	1329, 1361
AluBI	AGCT	8 cut(s)	347, 358, 469, 529, 700, 1112, 1911, 2196
AluI	AGCT	8 cut(s)	347, 358, 469, 529, 700, 1112, 1911, 2196
Alw21I	GWGCWC	5 cut(s)	349, 471, 531, 540, 1682
Alw26I	GTCTC	8 cut(s)	291, 479, 748, 1062, 1663, 1828, 1843, 2120
Alw44I	GTGCAC	1 cut(s)	536
AlwI	GGATC	2 cut(s)	924, 1373
AlwNI	CAGNNNCTG	2 cut(s)	462, 2063
Ama87I	CYCGRG	1 cut(s)	1072
AoxI	GGCC	9 cut(s)	41, 69, 83, 214, 388, 410, 515, 835, 1795
ApaLI	GTGCAC	1 cut(s)	536
ApeKI	GCWGC	4 cut(s)	113, 355, 707, 1158
ApoI	RAATTY	4 cut(s)	190, 232, 1417, 1831
AsiGI	ACCGGT	1 cut(s)	25
AspLEI	GCGC	3 cut(s)	587, 2073, 2120
AspS9I	GGNCC	6 cut(s)	516, 658, 1502, 1769, 1875, 2047
AsuC2I	CCSGG	2 cut(s)	1073, 1074
AsuHPI	GGTGA	9 cut(s)	15, 43, 113, 134, 520, 676, 905, 1283, 1474
AvaI	CYCGRG	1 cut(s)	1072
AvaII	GGWCC	5 cut(s)	658, 1502, 1769, 1875, 2047
BaeGI	GKGCMC	1 cut(s)	540
BanI	GGYRCC	1 cut(s)	2007
BanII	GRGCYC	4 cut(s)	330, 349, 471, 531
BbsI	GAAGAC	2 cut(s)	811, 2073
Bbv12I	GWGCWC	5 cut(s)	349, 471, 531, 540, 1682
BbvI	GCAGC	4 cut(s)	100, 367, 719, 1170
BccI	CCATC	7 cut(s)	338, 432, 443, 507, 697, 1582, 1787
BceAI	ACGGC	3 cut(s)	504, 572, 1782
BcgI	CGANNNNNNTGC	4 cut(s)	592, 626, 1552, 1586
BciT130I	CCWGG	5 cut(s)	662, 1165, 1506, 2045, 2052
BciVI	GTATCC	1 cut(s)	1737
BclI	TGATCA	1 cut(s)	1398
BcnI	CCSGG	2 cut(s)	1073, 1074
BcoDI	GTCTC	8 cut(s)	291, 479, 748, 1062, 1663, 1828, 1843, 2120
BcuI	ACTAGT	1 cut(s)	2161
BfaI	CTAG	3 cut(s)	435, 1965, 2162
BfmI	CTRYAG	1 cut(s)	2130
BfrI	CTTAAG	2 cut(s)	1261, 1406
BfuAI	ACCTGC	3 cut(s)	1259, 1450, 2071
BfuI	GTATCC	1 cut(s)	1737
BglI	GCCNNNNNGGC	1 cut(s)	843
BglII	AGATCT	1 cut(s)	2017
BisI	GCNGC	8 cut(s)	72, 114, 284, 356, 413, 684, 708, 1159
BlpI	GCTNAGC	1 cut(s)	687
BlsI	GCNGC	8 cut(s)	73, 115, 285, 357, 414, 685, 709, 1160
Bme1390I	CCNGG	7 cut(s)	662, 1073, 1074, 1165, 1506, 2045, 2052
Bme18I	GGWCC	5 cut(s)	658, 1502, 1769, 1875, 2047
BmeT110I	CYCGRG	1 cut(s)	1072
BmgT120I	GGNCC	6 cut(s)	516, 658, 1502, 1769, 1875, 2047
BmiI	GGNNCC	7 cut(s)	17, 557, 575, 923, 1876, 2009, 2049
BmrFI	CCNGG	7 cut(s)	662, 1073, 1074, 1165, 1506, 2045, 2052
BmrI	ACTGGG	1 cut(s)	1073
BmsI	GCATC	3 cut(s)	392, 1603, 1747
BmuI	ACTGGG	1 cut(s)	1073
BpiI	GAAGAC	2 cut(s)	811, 2073
BplI	GAGNNNNNCTC	4 cut(s)	284, 316, 317, 349
BpmI	CTGGAG	1 cut(s)	2008
Bpu1102I	GCTNAGC	1 cut(s)	687
BpuEI	CTTGAG	4 cut(s)	484, 1528, 1696, 2154
BpuMI	CCSGG	2 cut(s)	1073, 1074
BsaHI	GRCGYC	1 cut(s)	419
BsaI	GGTCTC	2 cut(s)	748, 1062
BsaJI	CCNNGG	7 cut(s)	391, 1072, 1163, 1382, 1730, 1798, 2050
BsaWI	WCCGGW	6 cut(s)	25, 53, 60, 123, 144, 1205
Bse118I	RCCGGY	4 cut(s)	18, 25, 415, 2028
Bse1I	ACTGG	5 cut(s)	575, 1068, 1687, 1820, 2009
Bse3DI	GCAATG	1 cut(s)	1132
BseBI	CCWGG	5 cut(s)	662, 1165, 1506, 2045, 2052
BseDI	CCNNGG	7 cut(s)	391, 1072, 1163, 1382, 1730, 1798, 2050
BseGI	GGATG	2 cut(s)	454, 1401
BseMI	GCAATG	1 cut(s)	1132
BseMII	CTCAG	5 cut(s)	315, 678, 741, 844, 1056
BseNI	ACTGG	5 cut(s)	575, 1068, 1687, 1820, 2009
BseRI	GAGGAG	7 cut(s)	289, 412, 653, 743, 818, 1881, 1884
BseSI	GKGCMC	1 cut(s)	540
BseXI	GCAGC	4 cut(s)	100, 367, 719, 1170
BseYI	CCCAGC	1 cut(s)	1990
Bsh1236I	CGCG	3 cut(s)	250, 474, 2073
Bsh1285I	CGRYCG	1 cut(s)	30
BshFI	GGCC	9 cut(s)	43, 71, 85, 216, 390, 412, 517, 837, 1797
BshNI	GGYRCC	1 cut(s)	2007
BshTI	ACCGGT	1 cut(s)	25
BsiEI	CGRYCG	1 cut(s)	30
BsiHKAI	GWGCWC	5 cut(s)	349, 471, 531, 540, 1682
BsiHKCI	CYCGRG	1 cut(s)	1072
BslFI	GGGAC	1 cut(s)	473
BsmAI	GTCTC	8 cut(s)	291, 479, 748, 1062, 1663, 1828, 1843, 2120
BsmBI	CGTCTC	1 cut(s)	479
BsmFI	GGGAC	1 cut(s)	473
BsnI	GGCC	9 cut(s)	43, 71, 85, 216, 390, 412, 517, 837, 1797
Bso31I	GGTCTC	2 cut(s)	748, 1062
BsoBI	CYCGRG	1 cut(s)	1072
Bsp1286I	GDGCHC	6 cut(s)	330, 349, 471, 531, 540, 1682
Bsp143I	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
Bsp1720I	GCTNAGC	1 cut(s)	687
BspACI	CCGC	8 cut(s)	72, 250, 283, 413, 472, 684, 1038, 1328
BspANI	GGCC	9 cut(s)	43, 71, 85, 216, 390, 412, 517, 837, 1797
BspCNI	CTCAG	5 cut(s)	316, 679, 742, 843, 1055
BspFNI	CGCG	3 cut(s)	250, 474, 2073
BspLI	GGNNCC	7 cut(s)	17, 557, 575, 923, 1876, 2009, 2049
BspMAI	CTGCAG	1 cut(s)	2134
BspMI	ACCTGC	3 cut(s)	1259, 1450, 2071
BspPI	GGATC	2 cut(s)	924, 1373
BspQI	GCTCTTC	1 cut(s)	966
BspT107I	GGYRCC	1 cut(s)	2007
BspTI	CTTAAG	2 cut(s)	1261, 1406
BspTNI	GGTCTC	2 cut(s)	748, 1062
BsrDI	GCAATG	1 cut(s)	1132
BsrFI	RCCGGY	4 cut(s)	18, 25, 415, 2028
BsrI	ACTGG	5 cut(s)	575, 1068, 1687, 1820, 2009
BssAI	RCCGGY	4 cut(s)	18, 25, 415, 2028
BssECI	CCNNGG	7 cut(s)	391, 1072, 1163, 1382, 1730, 1798, 2050
BssMI	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
BssNI	GRCGYC	1 cut(s)	419
BssT1I	CCWWGG	3 cut(s)	391, 1382, 1730
Bst2UI	CCWGG	5 cut(s)	662, 1165, 1506, 2045, 2052
Bst4CI	ACNGT	9 cut(s)	464, 547, 623, 911, 1217, 1883, 1943, 2143, 2204
Bst6I	CTCTTC	1 cut(s)	966
BstACI	GRCGYC	1 cut(s)	419
BstAFI	CTTAAG	2 cut(s)	1261, 1406
BstC8I	GCNNGC	3 cut(s)	111, 360, 417
BstDEI	CTNAG	5 cut(s)	324, 687, 750, 830, 1042
BstDSI	CCRYGG	1 cut(s)	1798
BstEII	GGTNACC	1 cut(s)	21
BstF5I	GGATG	2 cut(s)	454, 1401
BstFNI	CGCG	3 cut(s)	250, 474, 2073
BstHHI	GCGC	3 cut(s)	587, 2073, 2120
BstKTI	GATC	7 cut(s)	316, 919, 1186, 1381, 1401, 1609, 2020
BstMAI	GTCTC	8 cut(s)	291, 479, 748, 1062, 1663, 1828, 1843, 2120
BstMBI	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
BstMCI	CGRYCG	1 cut(s)	30
BstMWI	GCNNNNNNNGC	6 cut(s)	325, 535, 697, 843, 1109, 1178
BstNI	CCWGG	5 cut(s)	662, 1165, 1506, 2045, 2052
BstPI	GGTNACC	1 cut(s)	21
BstSCI	CCNGG	7 cut(s)	660, 1071, 1072, 1163, 1504, 2043, 2050
BstSFI	CTRYAG	1 cut(s)	2130
BstSLI	GKGCMC	1 cut(s)	540
BstUI	CGCG	3 cut(s)	250, 474, 2073
BstV1I	GCAGC	4 cut(s)	100, 367, 719, 1170
BstV2I	GAAGAC	2 cut(s)	811, 2073
BstX2I	RGATCY	2 cut(s)	1378, 2017
BstXI	CCANNNNNNTGG	1 cut(s)	668
BstYI	RGATCY	2 cut(s)	1378, 2017
BsuI	GTATCC	1 cut(s)	1737
BsuRI	GGCC	9 cut(s)	43, 71, 85, 216, 390, 412, 517, 837, 1797
BtgI	CCRYGG	1 cut(s)	1798
BtsCI	GGATG	2 cut(s)	454, 1401
BtsI	GCAGTG	2 cut(s)	286, 615
BtsIMutI	CAGTG	6 cut(s)	286, 615, 838, 916, 1061, 1680
BveI	ACCTGC	3 cut(s)	1259, 1450, 2071
Cac8I	GCNNGC	3 cut(s)	111, 360, 417
CaiI	CAGNNNCTG	2 cut(s)	462, 2063
CfoI	GCGC	3 cut(s)	587, 2073, 2120
Cfr10I	RCCGGY	4 cut(s)	18, 25, 415, 2028
Cfr13I	GGNCC	6 cut(s)	516, 658, 1502, 1769, 1875, 2047
Cfr9I	CCCGGG	1 cut(s)	1072
CseI	GACGC	2 cut(s)	408, 601
CsiI	ACCWGGT	1 cut(s)	660
Csp6I	GTAC	4 cut(s)	496, 2035, 2097, 2159
CspAI	ACCGGT	1 cut(s)	25
CviAII	CATG	8 cut(s)	955, 1153, 1367, 1402, 1494, 1662, 1804, 1935
CviQI	GTAC	4 cut(s)	496, 2035, 2097, 2159
DdeI	CTNAG	5 cut(s)	324, 687, 750, 830, 1042
DpnI	GATC	7 cut(s)	315, 918, 1185, 1380, 1400, 1608, 2019
DpnII	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
DraI	TTTAAA	1 cut(s)	1837
DrdI	GACNNNNNNGTC	2 cut(s)	244, 430
DseDI	GACNNNNNNGTC	2 cut(s)	244, 430
EaeI	YGGCCR	4 cut(s)	41, 83, 214, 1795
Eam1104I	CTCTTC	1 cut(s)	966
EarI	CTCTTC	1 cut(s)	966
Ecl136II	GAGCTC	3 cut(s)	347, 469, 529
Eco130I	CCWWGG	3 cut(s)	391, 1382, 1730
Eco24I	GRGCYC	4 cut(s)	330, 349, 471, 531
Eco31I	GGTCTC	2 cut(s)	748, 1062
Eco47I	GGWCC	5 cut(s)	658, 1502, 1769, 1875, 2047
Eco53kI	GAGCTC	3 cut(s)	347, 469, 529
Eco57I	CTGAAG	2 cut(s)	371, 617
Eco88I	CYCGRG	1 cut(s)	1072
Eco91I	GGTNACC	1 cut(s)	21
EcoICRI	GAGCTC	3 cut(s)	347, 469, 529
EcoO109I	RGGNCCY	2 cut(s)	1769, 2047
EcoO65I	GGTNACC	1 cut(s)	21
EcoRI	GAATTC	1 cut(s)	232
EcoRII	CCWGG	5 cut(s)	660, 1163, 1504, 2043, 2050
EcoT14I	CCWWGG	3 cut(s)	391, 1382, 1730
EcoT38I	GRGCYC	4 cut(s)	330, 349, 471, 531
ErhI	CCWWGG	3 cut(s)	391, 1382, 1730
Esp3I	CGTCTC	1 cut(s)	479
FaeI	CATG	8 cut(s)	958, 1156, 1370, 1405, 1497, 1665, 1807, 1938
FaqI	GGGAC	1 cut(s)	473
FatI	CATG	8 cut(s)	954, 1152, 1366, 1401, 1493, 1661, 1803, 1934
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	1398
FblI	GTMKAC	3 cut(s)	422, 618, 1530
Fnu4HI	GCNGC	8 cut(s)	72, 114, 284, 356, 413, 684, 708, 1159
FokI	GGATG	2 cut(s)	461, 1408
FriOI	GRGCYC	4 cut(s)	330, 349, 471, 531
Fsp4HI	GCNGC	8 cut(s)	72, 114, 284, 356, 413, 684, 708, 1159
FspBI	CTAG	3 cut(s)	435, 1965, 2162
GlaI	GCGC	3 cut(s)	586, 2072, 2119
GluI	GCNGC	8 cut(s)	72, 114, 284, 356, 413, 684, 708, 1159
GsaI	CCCAGC	1 cut(s)	1994
GsuI	CTGGAG	1 cut(s)	2008
HaeIII	GGCC	9 cut(s)	43, 71, 85, 216, 390, 412, 517, 837, 1797
HgaI	GACGC	2 cut(s)	408, 601
HhaI	GCGC	3 cut(s)	587, 2073, 2120
Hin1I	GRCGYC	1 cut(s)	419
Hin1II	CATG	8 cut(s)	958, 1156, 1370, 1405, 1497, 1665, 1807, 1938
Hin6I	GCGC	3 cut(s)	585, 2071, 2118
HinP1I	GCGC	3 cut(s)	585, 2071, 2118
HincII	GTYRAC	2 cut(s)	423, 619
HindII	GTYRAC	2 cut(s)	423, 619
HindIII	AAGCTT	1 cut(s)	1110
HphI	GGTGA	9 cut(s)	15, 43, 113, 134, 520, 676, 905, 1283, 1474
Hpy166II	GTNNAC	4 cut(s)	423, 538, 619, 1531
Hpy188III	TCNNGA	7 cut(s)	258, 435, 501, 1445, 1545, 1610, 1898
Hpy8I	GTNNAC	4 cut(s)	423, 538, 619, 1531
Hpy99I	CGWCG	7 cut(s)	241, 341, 344, 424, 623, 818, 1943
HpyAV	CCTTC	7 cut(s)	273, 362, 498, 592, 598, 643, 808
HpyCH4III	ACNGT	9 cut(s)	464, 547, 623, 911, 1217, 1883, 1943, 2143, 2204
HpyCH4IV	ACGT	1 cut(s)	1750
HpyF10VI	GCNNNNNNNGC	6 cut(s)	325, 535, 697, 843, 1109, 1178
HpyF3I	CTNAG	5 cut(s)	324, 687, 750, 830, 1042
HpySE526I	ACGT	1 cut(s)	1750
Hsp92I	GRCGYC	1 cut(s)	419
Hsp92II	CATG	8 cut(s)	958, 1156, 1370, 1405, 1497, 1665, 1807, 1938
HspAI	GCGC	3 cut(s)	585, 2071, 2118
KroI	GCCGGC	1 cut(s)	415
KroNI	GCCGGC	1 cut(s)	417
Ksp22I	TGATCA	1 cut(s)	1398
Kzo9I	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
LguI	GCTCTTC	1 cut(s)	966
LmnI	GCTCC	6 cut(s)	15, 344, 474, 561, 921, 2201
Lsp1109I	GCAGC	4 cut(s)	100, 367, 719, 1170
LweI	GCATC	3 cut(s)	392, 1603, 1747
MabI	ACCWGGT	1 cut(s)	660
MaeI	CTAG	3 cut(s)	435, 1965, 2162
MaeII	ACGT	1 cut(s)	1750
MaeIII	GTNAC	8 cut(s)	21, 63, 589, 1285, 1474, 1538, 1960, 2204
MalI	GATC	7 cut(s)	315, 918, 1185, 1380, 1400, 1608, 2019
MboI	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
MflI	RGATCY	2 cut(s)	1378, 2017
MhlI	GDGCHC	6 cut(s)	330, 349, 471, 531, 540, 1682
MluCI	AATT	8 cut(s)	190, 232, 864, 1209, 1417, 1470, 1831, 1886
MlyI	GAGTC	2 cut(s)	293, 926
MmeI	TCCRAC	9 cut(s)	322, 591, 636, 1086, 1114, 1564, 1670, 1895, 1902
MreI	CGCCGGCG	1 cut(s)	415
MroNI	GCCGGC	1 cut(s)	415
MseI	TTAA	7 cut(s)	1262, 1296, 1407, 1622, 1836, 1854, 1860
MslI	CAYNNNNRTG	2 cut(s)	857, 1791
MspA1I	CMGCKG	1 cut(s)	686
MspCI	CTTAAG	2 cut(s)	1261, 1406
MspR9I	CCNGG	7 cut(s)	662, 1073, 1074, 1165, 1506, 2045, 2052
MvaI	CCWGG	5 cut(s)	662, 1165, 1506, 2045, 2052
MvnI	CGCG	3 cut(s)	250, 474, 2073
MwoI	GCNNNNNNNGC	6 cut(s)	325, 535, 697, 843, 1109, 1178
NaeI	GCCGGC	1 cut(s)	417
NciI	CCSGG	2 cut(s)	1073, 1074
NdeI	CATATG	1 cut(s)	739
NdeII	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
NgoMIV	GCCGGC	1 cut(s)	415
NlaIII	CATG	8 cut(s)	958, 1156, 1370, 1405, 1497, 1665, 1807, 1938
NlaIV	GGNNCC	7 cut(s)	17, 557, 575, 923, 1876, 2009, 2049
NmuCI	GTSAC	4 cut(s)	21, 63, 589, 1960
PaqCI	CACCTGC	2 cut(s)	1259, 1450
PciSI	GCTCTTC	1 cut(s)	966
PcsI	WCGNNNNNNNCGW	1 cut(s)	599
PdiI	GCCGGC	1 cut(s)	417
PflFI	GACNNNGTC	1 cut(s)	623
PflMI	CCANNNNNTGG	3 cut(s)	955, 1499, 2219
PinAI	ACCGGT	1 cut(s)	25
PkrI	GCNGC	8 cut(s)	73, 115, 285, 357, 414, 685, 709, 1160
PleI	GAGTC	2 cut(s)	293, 926
PpsI	GAGTC	2 cut(s)	293, 926
PpuMI	RGGWCCY	2 cut(s)	1769, 2047
PsiI	TTATAA	1 cut(s)	1202
Psp124BI	GAGCTC	3 cut(s)	349, 471, 531
Psp5II	RGGWCCY	2 cut(s)	1769, 2047
Psp6I	CCWGG	5 cut(s)	660, 1163, 1504, 2043, 2050
PspEI	GGTNACC	1 cut(s)	21
PspFI	CCCAGC	1 cut(s)	1990
PspGI	CCWGG	5 cut(s)	660, 1163, 1504, 2043, 2050
PspN4I	GGNNCC	7 cut(s)	17, 557, 575, 923, 1876, 2009, 2049
PspPI	GGNCC	6 cut(s)	516, 658, 1502, 1769, 1875, 2047
PspPPI	RGGWCCY	2 cut(s)	1769, 2047
PstI	CTGCAG	1 cut(s)	2134
PstNI	CAGNNNCTG	2 cut(s)	462, 2063
PsuI	RGATCY	2 cut(s)	1378, 2017
PsyI	GACNNNGTC	1 cut(s)	623
RsaI	GTAC	4 cut(s)	497, 2036, 2098, 2160
RsaNI	GTAC	4 cut(s)	496, 2035, 2097, 2159
RseI	CAYNNNNRTG	2 cut(s)	857, 1791
SacI	GAGCTC	3 cut(s)	349, 471, 531
SalI	GTCGAC	2 cut(s)	421, 617
SapI	GCTCTTC	1 cut(s)	966
SaqAI	TTAA	7 cut(s)	1262, 1296, 1407, 1622, 1836, 1854, 1860
SatI	GCNGC	8 cut(s)	72, 114, 284, 356, 413, 684, 708, 1159
Sau3AI	GATC	7 cut(s)	313, 916, 1183, 1378, 1398, 1606, 2017
Sau96I	GGNCC	6 cut(s)	516, 658, 1502, 1769, 1875, 2047
SchI	GAGTC	2 cut(s)	293, 926
ScrFI	CCNGG	7 cut(s)	662, 1073, 1074, 1165, 1506, 2045, 2052
SduI	GDGCHC	6 cut(s)	330, 349, 471, 531, 540, 1682
SexAI	ACCWGGT	1 cut(s)	660
SfaNI	GCATC	3 cut(s)	392, 1603, 1747
SfcI	CTRYAG	1 cut(s)	2130
SgrAI	CRCCGGYG	1 cut(s)	415
SinI	GGWCC	5 cut(s)	658, 1502, 1769, 1875, 2047
SmaI	CCCGGG	1 cut(s)	1074
SmiMI	CAYNNNNRTG	2 cut(s)	857, 1791
SmlI	CTYRAG	6 cut(s)	499, 1261, 1406, 1543, 1675, 2169
SmoI	CTYRAG	6 cut(s)	499, 1261, 1406, 1543, 1675, 2169
SpeI	ACTAGT	1 cut(s)	2161
Sse9I	AATT	8 cut(s)	190, 232, 864, 1209, 1417, 1470, 1831, 1886
SsiI	CCGC	8 cut(s)	72, 250, 283, 413, 472, 684, 1038, 1328
SspI	AATATT	1 cut(s)	1005
SspMI	CTAG	3 cut(s)	435, 1965, 2162
SstI	GAGCTC	3 cut(s)	349, 471, 531
StyD4I	CCNGG	7 cut(s)	660, 1071, 1072, 1163, 1504, 2043, 2050
StyI	CCWWGG	3 cut(s)	391, 1382, 1730
TaaI	ACNGT	9 cut(s)	464, 547, 623, 911, 1217, 1883, 1943, 2143, 2204
TaiI	ACGT	1 cut(s)	1753
TaqI	TCGA	5 cut(s)	236, 422, 525, 618, 631
TaqII	GACCGA	1 cut(s)	779
TasI	AATT	8 cut(s)	190, 232, 864, 1209, 1417, 1470, 1831, 1886
TatI	WGTACW	2 cut(s)	2034, 2158
TauI	GCSGC	4 cut(s)	74, 286, 415, 686
Tru1I	TTAA	7 cut(s)	1262, 1296, 1407, 1622, 1836, 1854, 1860
Tru9I	TTAA	7 cut(s)	1262, 1296, 1407, 1622, 1836, 1854, 1860
TscAI	CASTG	6 cut(s)	293, 615, 838, 916, 1068, 1687
TseFI	GTSAC	4 cut(s)	21, 63, 589, 1960
TseI	GCWGC	4 cut(s)	113, 355, 707, 1158
Tsp45I	GTSAC	4 cut(s)	21, 63, 589, 1960
TspDTI	ATGAA	7 cut(s)	1094, 1143, 1220, 1260, 1362, 1529, 1823
TspGWI	ACGGA	3 cut(s)	325, 961, 1304
TspMI	CCCGGG	1 cut(s)	1072
TspRI	CASTG	6 cut(s)	293, 615, 838, 916, 1068, 1687
Tth111I	GACNNNGTC	1 cut(s)	623
Van91I	CCANNNNNTGG	3 cut(s)	955, 1499, 2219
Vha464I	CTTAAG	2 cut(s)	1261, 1406
VneI	GTGCAC	1 cut(s)	536
VpaK11BI	GGWCC	5 cut(s)	658, 1502, 1769, 1875, 2047
XapI	RAATTY	4 cut(s)	190, 232, 1417, 1831
XbaI	TCTAGA	1 cut(s)	434
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2216
XmaI	CCCGGG	1 cut(s)	1072
XmiI	GTMKAC	3 cut(s)	422, 618, 1530
XspI	CTAG	3 cut(s)	435, 1965, 2162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.