Rmu_sc0007193.1_g000008

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007193.1
OG0014594
Physical Location & Seq
Forward (+)
45047 .. 50369
5323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007193.1_g000008.1.cds

Sequence Viewer

Length: 2334 bp
atgaagctccgagctctcattctcatgcctgttatcttcttctccaccctcatcttcctcattgatctcaccgagtcaactcagcccccatattcatgtgactcgtccaacccatcaaccgagtcgtaccctttttgcaaaacaaccctcccaatccacgaaagagtccatgacctcgtctcgcgtctcacattggacgagaagatctcccaactcgtcaactcggcccctccgattccccgactcggtatcccgagttacgagtggtggtcggaggctcttcacggcgtcgccgacgtcggcaaaggcgttcgtctctatggcaccgtctccagcgccaccagcttccctcaagtcattttaaccgctgcttcattcaatgagcatctctggtacagaatcggtcaggcgatcggaaccgaagctagggcggtgtacaatgcaggacaagcgacagggatgacattttgggcaccaaacatcaacattttcagggacccaagatggggaagagggcaagagactcccggggaagacccaatgatgacgggaaaatacgccgtggcgtatgttcgaggtgttcaaggtgattcatatgagggagggaagctggctggccatctcaaggcctcggcttgctgtaagcatttcacggcgtacgatctggatagctggaataatgtgactcgttttgggtttaatgcaaaggtgactcagcaagacctagcagacacgtaccaacctccattcaagagttgcgtcgagcagggcaaagccagtggcattatgtgtgcttataatcaagtcaatggagtcccaagctgtgcagatcgcaatctcttaaccaagactgctcgaggacaatggaactttcacgggtacatcacgtcggactgcgatgccgtcggcatcatccacgacgtgcagggatacgctaagcagccggaagatgccgtcgtcgatgtactcaaagcaggcatggatgtgaactgtggaacctacttgcagaattacacgaaaagtgcagtgcagcagaaaaagctgcccataacatacatagacaaagccctccacaacctgttctctataaggatgaggttaggtctgtttgatggcaacccaaccaagctacttttcggcaacattggtccagaccaagtgtgctctaaacagcaccaagttttagccctagaagctgcagaagatggcattgtgcttttgaagaacgcagacaagctactcccactacctaaatcaaaggggatttctcttgctgtaatcggtcccaatgccaatgcttccgaaacacttctcggaaactatcatggcccaccatgcaaggtcattacgccattagaaggactgctaggttatgctaagaaaacagtgtatcaccctggatgtgatacagttaaatgccctaatcctacgattgatcaagctgtgaaagtagcagaacaggcagattatgtggttttgattgtgggattggaccaaagtgaagaaagagaggcgcatgatagagaccacttatacttgcctggtaagcaacaacaactcattagcagtgtggctaaagctgccaagaaaccagtaattcttgtgattctctctgggggtccagttgacatatctgcagccaaggataatccaaaaataggaagcatcttgtgggctggatacccaggtgaagctggtggaattgccctggcagaaatcatctttggtgatcacaacccaggtggaagactgccagtaacatggtatacacaagattacatcaaaacaccaatgactgacatgaggatgaggcatgacaaaaaatcaggctatcctgggcgcacttacagattctacacaggcgaaagagtgtttgatttcggttatggcctcagctactccaactacgcttatcactttgtatcttcattaacccaaaagaacctctacctaaatgagtcatcggttggtctaccagctaagaattcggactctagacgctaccagttagtttcagatctaggtgaagaattctgtcagaagaatttgttcaaggtcactgtcagggctaagaatgacggagagatggctggtaagcatccagtgttgctatttgtaagtcagaaaaatccgtcaaatggaagtccaataaaacagttggttggattcaaaagcgtgatactaagcgccggggaaaaagctgaatttgaattcatgctgaacccttgtgagcatttcagccatgcaaatgaggatggatcgatggtggtagaagaaggttctcgtttcttggttgtgggtgatgtagagcaccctattcatgtcatagtttga

Protein Analysis

777

Amino Acids

85.36

Weight (kDa)

6.89

Isoelectric Point (pI)

29.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014594)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78060
fragaria_vesca FvH4_5g37840
malus_domestica MD08G1179900.v1.1 MD15G1365200.v1.1
prunus_persica Prupe.1G513200_v2.0.a1
pyrus_communis pycom08g15400 pycom15g32750
rosa_chinensis RchiOBHm_Chr7g0239821
rosa_laevigata RLG00000000728
rosa_multiflora Rmu_sc0007193.1_g000008
rosa_roxburghii Rroxscaffold_3G00220790
rosa_rugosa Rorug07G0329500
rosa_samantha Rh7AG483700 Rh7BG456700 Rh7CG501200 Rh7DG469400
rosa_wichuraiana Rw7G040570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 798
AatII GACGTC 1 cut(s) 300
AccB1I GGYRCC 2 cut(s) 323, 472
AccI GTMKAC 2 cut(s) 1766, 1972
AccII CGCG 1 cut(s) 184
AciI CCGC 2 cut(s) 366, 431
AclWI GGATC 1 cut(s) 2266
AcoI YGGCCR 1 cut(s) 616
AcsI RAATTY 5 cut(s) 1984, 2030, 2044, 2204, 2210
AcyI GRCGYC 2 cut(s) 288, 297
AdeI CACNNNGTG 1 cut(s) 922
AfaI GTAC 7 cut(s) 128, 395, 437, 659, 737, 881, 966
AfiI CCNNNNNNNGG 8 cut(s) 245, 426, 505, 506, 625, 1358, 1658, 2138
AflIII ACRYGT 1 cut(s) 732
AgsI TTSAA 7 cut(s) 379, 584, 751, 1222, 2053, 2170, 2210
AjiI CACGTC 2 cut(s) 888, 922
AjnI CCWGG 6 cut(s) 1396, 1540, 1684, 1707, 1738, 1834
AjuI GAANNNNNNNTTGG 4 cut(s) 1118, 1150, 1707, 1739
Alw21I GWGCWC 3 cut(s) 16, 1166, 2313
Alw26I GTCTC 6 cut(s) 184, 191, 320, 334, 515, 1518
AlwI GGATC 1 cut(s) 2266
Ama87I CYCGRG 3 cut(s) 253, 527, 855
AoxI GGCC 5 cut(s) 225, 616, 627, 1327, 1888
ApeKI GCWGC 7 cut(s) 368, 940, 1030, 1042, 1196, 1580, 1637
ApoI RAATTY 5 cut(s) 1984, 2030, 2044, 2204, 2210
Asp700I GAANNNNTTC 2 cut(s) 1308, 2048
AspLEI GCGC 4 cut(s) 338, 1516, 1842, 2189
AspS9I GGNCC 7 cut(s) 226, 496, 1148, 1283, 1328, 1492, 1619
AsuC2I CCSGG 3 cut(s) 528, 529, 2191
AsuHPI GGTGA 8 cut(s) 61, 599, 721, 1385, 1700, 1739, 2036, 2312
AvaI CYCGRG 3 cut(s) 253, 527, 855
AvaII GGWCC 5 cut(s) 496, 1148, 1283, 1492, 1619
BaeGI GKGCMC 1 cut(s) 475
BaeI ACNNNNGTAYC 2 cut(s) 1672, 1705
BalI TGGCCA 1 cut(s) 618
BanI GGYRCC 2 cut(s) 323, 472
BanII GRGCYC 1 cut(s) 16
BbsI GAAGAC 2 cut(s) 540, 1753
Bbv12I GWGCWC 3 cut(s) 16, 1166, 2313
BbvCI CCTCAGC 1 cut(s) 1892
BbvI GCAGC 7 cut(s) 355, 952, 1029, 1042, 1183, 1567, 1649
BccI CCATC 8 cut(s) 121, 498, 627, 1106, 1199, 2080, 2249, 2257
BceAI ACGGC 5 cut(s) 301, 545, 669, 887, 938
BciT130I CCWGG 6 cut(s) 1398, 1542, 1686, 1709, 1740, 1836
BciVI GTATCC 3 cut(s) 260, 923, 1673
BclI TGATCA 2 cut(s) 1435, 1729
BcnI CCSGG 3 cut(s) 528, 529, 2191
BcoDI GTCTC 6 cut(s) 184, 191, 320, 334, 515, 1518
BfaI CTAG 6 cut(s) 426, 725, 1190, 1367, 1995, 2021
BfmI CTRYAG 2 cut(s) 1197, 1635
BfoI RGCGCY 2 cut(s) 339, 2190
BfuI GTATCC 3 cut(s) 260, 923, 1673
BglII AGATCT 2 cut(s) 204, 2017
BisI GCNGC 7 cut(s) 369, 941, 1031, 1043, 1197, 1581, 1638
BlpI GCTNAGC 1 cut(s) 936
BlsI GCNGC 7 cut(s) 370, 942, 1032, 1044, 1198, 1582, 1639
Bme1390I CCNGG 9 cut(s) 528, 529, 1398, 1542, 1686, 1709, 1740, 1836, 2191
Bme18I GGWCC 5 cut(s) 496, 1148, 1283, 1492, 1619
BmeT110I CYCGRG 3 cut(s) 253, 527, 855
BmgBI CACGTC 2 cut(s) 888, 922
BmgT120I GGNCC 7 cut(s) 226, 496, 1148, 1283, 1328, 1492, 1619
BmiI GGNNCC 9 cut(s) 228, 325, 418, 474, 497, 498, 997, 1285, 1620
BmrFI CCNGG 9 cut(s) 528, 529, 1398, 1542, 1686, 1709, 1740, 1836, 2191
BmsI GCATC 6 cut(s) 394, 889, 918, 940, 1674, 2107
BpiI GAAGAC 2 cut(s) 540, 1753
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 1 cut(s) 316
Bpu10I CCTNAGC 1 cut(s) 1892
Bpu1102I GCTNAGC 1 cut(s) 936
BpuEI CTTGAG 2 cut(s) 336, 608
BpuMI CCSGG 3 cut(s) 528, 529, 2191
Bsa29I ATCGAT 1 cut(s) 2261
BsaAI YACGTR 1 cut(s) 735
BsaBI GATNNNNATC 1 cut(s) 834
BsaHI GRCGYC 2 cut(s) 288, 297
BsaI GGTCTC 1 cut(s) 1518
Bsc4I CCNNNNNNNGG 8 cut(s) 245, 426, 505, 506, 625, 1358, 1658, 2138
Bse1I ACTGG 6 cut(s) 777, 1592, 1622, 1754, 2005, 2102
Bse8I GATNNNNATC 1 cut(s) 834
BseBI CCWGG 6 cut(s) 1398, 1542, 1686, 1709, 1740, 1836
BseCI ATCGAT 1 cut(s) 2261
BseGI GGATG 8 cut(s) 465, 912, 988, 1098, 1406, 1812, 2098, 2260
BseJI GATNNNNATC 1 cut(s) 834
BseLI CCNNNNNNNGG 8 cut(s) 245, 426, 505, 506, 625, 1358, 1658, 2138
BseMII CTCAG 3 cut(s) 95, 728, 1906
BseNI ACTGG 6 cut(s) 777, 1592, 1622, 1754, 2005, 2102
BseSI GKGCMC 1 cut(s) 475
BseXI GCAGC 7 cut(s) 355, 952, 1029, 1042, 1183, 1567, 1649
BsgI GTGCAG 4 cut(s) 846, 944, 1044, 1049
Bsh1236I CGCG 1 cut(s) 184
Bsh1285I CGRYCG 1 cut(s) 414
BshFI GGCC 5 cut(s) 227, 618, 629, 1329, 1890
BshNI GGYRCC 2 cut(s) 323, 472
BshVI ATCGAT 1 cut(s) 2261
BsiEI CGRYCG 1 cut(s) 414
BsiHKAI GWGCWC 3 cut(s) 16, 1166, 2313
BsiHKCI CYCGRG 3 cut(s) 253, 527, 855
BsiSI CCGG 3 cut(s) 528, 944, 2190
BsiWI CGTACG 1 cut(s) 657
BslFI GGGAC 3 cut(s) 509, 800, 1269
BslI CCNNNNNNNGG 8 cut(s) 245, 426, 505, 506, 625, 1358, 1658, 2138
BsmAI GTCTC 6 cut(s) 184, 191, 320, 334, 515, 1518
BsmBI CGTCTC 4 cut(s) 184, 191, 320, 334
BsmFI GGGAC 3 cut(s) 509, 800, 1269
BsnI GGCC 5 cut(s) 227, 618, 629, 1329, 1890
Bso31I GGTCTC 1 cut(s) 1518
BsoBI CYCGRG 3 cut(s) 253, 527, 855
Bsp1286I GDGCHC 4 cut(s) 16, 475, 1166, 2313
Bsp1407I TGTACA 1 cut(s) 435
Bsp143I GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
Bsp1720I GCTNAGC 1 cut(s) 936
BspACI CCGC 2 cut(s) 366, 431
BspANI GGCC 5 cut(s) 227, 618, 629, 1329, 1890
BspCNI CTCAG 3 cut(s) 94, 727, 1905
BspDI ATCGAT 1 cut(s) 2261
BspFNI CGCG 1 cut(s) 184
BspLI GGNNCC 9 cut(s) 228, 325, 418, 474, 497, 498, 997, 1285, 1620
BspMAI CTGCAG 2 cut(s) 1201, 1639
BspPI GGATC 1 cut(s) 2266
BspQI GCTCTTC 1 cut(s) 285
BspT107I GGYRCC 2 cut(s) 323, 472
BspTNI GGTCTC 1 cut(s) 1518
BsrGI TGTACA 1 cut(s) 435
BsrI ACTGG 6 cut(s) 777, 1592, 1622, 1754, 2005, 2102
BssMI GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
BssNAI GTATAC 1 cut(s) 1767
BssNI GRCGYC 2 cut(s) 288, 297
BssT1I CCWWGG 1 cut(s) 1641
Bst1107I GTATAC 1 cut(s) 1767
Bst2UI CCWGG 6 cut(s) 1398, 1542, 1686, 1709, 1740, 1836
Bst4CI ACNGT 6 cut(s) 328, 992, 1387, 1411, 2062, 2157
Bst6I CTCTTC 2 cut(s) 285, 505
BstACI GRCGYC 2 cut(s) 288, 297
BstAUI TGTACA 1 cut(s) 435
BstBAI YACGTR 1 cut(s) 735
BstC8I GCNNGC 4 cut(s) 612, 616, 637, 976
BstDEI CTNAG 8 cut(s) 81, 714, 936, 1377, 1892, 1980, 2070, 2183
BstDSI CCRYGG 1 cut(s) 561
BstF5I GGATG 8 cut(s) 465, 912, 988, 1098, 1406, 1812, 2098, 2260
BstFNI CGCG 1 cut(s) 184
BstH2I RGCGCY 2 cut(s) 339, 2190
BstHHI GCGC 4 cut(s) 338, 1516, 1842, 2189
BstKTI GATC 9 cut(s) 67, 207, 414, 664, 832, 1438, 1732, 2020, 2261
BstMAI GTCTC 6 cut(s) 184, 191, 320, 334, 515, 1518
BstMBI GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
BstMCI CGRYCG 1 cut(s) 414
BstMWI GCNNNNNNNGC 8 cut(s) 342, 449, 1039, 1193, 1335, 1460, 1546, 1580
BstNI CCWGG 6 cut(s) 1398, 1542, 1686, 1709, 1740, 1836
BstSCI CCNGG 9 cut(s) 526, 527, 1396, 1540, 1684, 1707, 1738, 1834, 2189
BstSFI CTRYAG 2 cut(s) 1197, 1635
BstSLI GKGCMC 1 cut(s) 475
BstUI CGCG 1 cut(s) 184
BstV1I GCAGC 7 cut(s) 355, 952, 1029, 1042, 1183, 1567, 1649
BstV2I GAAGAC 2 cut(s) 540, 1753
BstX2I RGATCY 2 cut(s) 204, 2017
BstXI CCANNNNNNTGG 1 cut(s) 1761
BstYI RGATCY 2 cut(s) 204, 2017
BstZ17I GTATAC 1 cut(s) 1767
Bsu15I ATCGAT 1 cut(s) 2261
BsuI GTATCC 3 cut(s) 260, 923, 1673
BsuRI GGCC 5 cut(s) 227, 618, 629, 1329, 1890
BsuTUI ATCGAT 1 cut(s) 2261
BtgI CCRYGG 1 cut(s) 561
BtgZI GCGATG 1 cut(s) 912
BtrI CACGTC 2 cut(s) 888, 922
BtsCI GGATG 8 cut(s) 465, 912, 988, 1098, 1406, 1812, 2098, 2260
BtsI GCAGTG 2 cut(s) 1032, 1573
BtsIMutI CAGTG 6 cut(s) 784, 1032, 1392, 1573, 2058, 2109
Cac8I GCNNGC 4 cut(s) 612, 616, 637, 976
CfoI GCGC 4 cut(s) 338, 1516, 1842, 2189
Cfr13I GGNCC 7 cut(s) 226, 496, 1148, 1283, 1328, 1492, 1619
Cfr9I CCCGGG 1 cut(s) 527
ClaI ATCGAT 1 cut(s) 2261
CseI GACGC 4 cut(s) 173, 277, 748, 2007
Csp6I GTAC 7 cut(s) 127, 394, 436, 658, 736, 880, 965
CspCI CAANNNNNGTGG 4 cut(s) 760, 795, 1723, 1758
CviQI GTAC 7 cut(s) 127, 394, 436, 658, 736, 880, 965
DdeI CTNAG 8 cut(s) 81, 714, 936, 1377, 1892, 1980, 2070, 2183
DpnI GATC 9 cut(s) 66, 206, 413, 663, 831, 1437, 1731, 2019, 2260
DpnII GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
DraIII CACNNNGTG 1 cut(s) 922
EaeI YGGCCR 1 cut(s) 616
Eam1104I CTCTTC 2 cut(s) 285, 505
EarI CTCTTC 2 cut(s) 285, 505
Ecl136II GAGCTC 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 1641
Eco147I AGGCCT 1 cut(s) 629
Eco24I GRGCYC 1 cut(s) 16
Eco31I GGTCTC 1 cut(s) 1518
Eco47I GGWCC 5 cut(s) 496, 1148, 1283, 1492, 1619
Eco53kI GAGCTC 1 cut(s) 14
Eco88I CYCGRG 3 cut(s) 253, 527, 855
EcoICRI GAGCTC 1 cut(s) 14
EcoO109I RGGNCCY 1 cut(s) 496
EcoRI GAATTC 3 cut(s) 1984, 2030, 2210
EcoRII CCWGG 6 cut(s) 1396, 1540, 1684, 1707, 1738, 1834
EcoT14I CCWWGG 1 cut(s) 1641
EcoT38I GRGCYC 1 cut(s) 16
ErhI CCWWGG 1 cut(s) 1641
Esp3I CGTCTC 4 cut(s) 184, 191, 320, 334
FaqI GGGAC 3 cut(s) 509, 800, 1269
FauNDI CATATG 1 cut(s) 595
FbaI TGATCA 2 cut(s) 1435, 1729
FblI GTMKAC 2 cut(s) 1766, 1972
Fnu4HI GCNGC 7 cut(s) 369, 941, 1031, 1043, 1197, 1581, 1638
FokI GGATG 8 cut(s) 472, 899, 995, 1105, 1413, 1819, 2085, 2267
FriOI GRGCYC 1 cut(s) 16
Fsp4HI GCNGC 7 cut(s) 369, 941, 1031, 1043, 1197, 1581, 1638
FspBI CTAG 6 cut(s) 426, 725, 1190, 1367, 1995, 2021
GlaI GCGC 4 cut(s) 337, 1515, 1841, 2188
GluI GCNGC 7 cut(s) 369, 941, 1031, 1043, 1197, 1581, 1638
GsuI CTGGAG 1 cut(s) 316
HaeII RGCGCY 2 cut(s) 339, 2190
HaeIII GGCC 5 cut(s) 227, 618, 629, 1329, 1890
HapII CCGG 3 cut(s) 528, 944, 2190
HgaI GACGC 4 cut(s) 173, 277, 748, 2007
HhaI GCGC 4 cut(s) 338, 1516, 1842, 2189
Hin1I GRCGYC 2 cut(s) 288, 297
Hin6I GCGC 4 cut(s) 336, 1514, 1840, 2187
HinP1I GCGC 4 cut(s) 336, 1514, 1840, 2187
HincII GTYRAC 3 cut(s) 78, 220, 1627
HindII GTYRAC 3 cut(s) 78, 220, 1627
HpaII CCGG 3 cut(s) 528, 944, 2190
HphI GGTGA 8 cut(s) 61, 599, 721, 1385, 1700, 1739, 2036, 2312
Hpy166II GTNNAC 7 cut(s) 78, 220, 436, 988, 1627, 1767, 1973
Hpy188III TCNNGA 5 cut(s) 253, 665, 751, 1151, 1995
Hpy8I GTNNAC 7 cut(s) 78, 220, 436, 988, 1627, 1767, 1973
Hpy99I CGWCG 9 cut(s) 293, 299, 302, 764, 892, 908, 923, 959, 962
HpyAV CCTTC 2 cut(s) 1352, 2270
HpyCH4III ACNGT 6 cut(s) 328, 992, 1387, 1411, 2062, 2157
HpyCH4IV ACGT 4 cut(s) 297, 734, 887, 921
HpyF10VI GCNNNNNNNGC 8 cut(s) 342, 449, 1039, 1193, 1335, 1460, 1546, 1580
HpyF3I CTNAG 8 cut(s) 81, 714, 936, 1377, 1892, 1980, 2070, 2183
HpySE526I ACGT 4 cut(s) 297, 734, 887, 921
Hsp92I GRCGYC 2 cut(s) 288, 297
HspAI GCGC 4 cut(s) 336, 1514, 1840, 2187
KflI GGGWCCC 1 cut(s) 496
Ksp22I TGATCA 2 cut(s) 1435, 1729
Kzo9I GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
LguI GCTCTTC 1 cut(s) 285
LmnI GCTCC 1 cut(s) 12
Lsp1109I GCAGC 7 cut(s) 355, 952, 1029, 1042, 1183, 1567, 1649
LweI GCATC 6 cut(s) 394, 889, 918, 940, 1674, 2107
MaeI CTAG 6 cut(s) 426, 725, 1190, 1367, 1995, 2021
MaeII ACGT 4 cut(s) 297, 734, 887, 921
MaeIII GTNAC 6 cut(s) 98, 257, 682, 709, 1756, 2056
MalI GATC 9 cut(s) 66, 206, 413, 663, 831, 1437, 1731, 2019, 2260
MboI GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
MflI RGATCY 2 cut(s) 204, 2017
MhlI GDGCHC 4 cut(s) 16, 475, 1166, 2313
MlsI TGGCCA 1 cut(s) 618
MluCI AATT 8 cut(s) 1009, 1596, 1701, 1984, 2030, 2044, 2204, 2210
MluNI TGGCCA 1 cut(s) 618
MmeI TCCRAC 5 cut(s) 132, 252, 870, 1926, 2143
Mox20I TGGCCA 1 cut(s) 618
MroXI GAANNNNTTC 2 cut(s) 1308, 2048
MscI TGGCCA 1 cut(s) 618
MseI TTAA 5 cut(s) 362, 699, 842, 1413, 1931
MslI CAYNNNNRTG 5 cut(s) 23, 94, 983, 1805, 2247
Msp20I TGGCCA 1 cut(s) 618
MspA1I CMGCKG 1 cut(s) 368
MspI CCGG 3 cut(s) 528, 944, 2190
MspR9I CCNGG 9 cut(s) 528, 529, 1398, 1542, 1686, 1709, 1740, 1836, 2191
MvaI CCWGG 6 cut(s) 1398, 1542, 1686, 1709, 1740, 1836
MvnI CGCG 1 cut(s) 184
MwoI GCNNNNNNNGC 8 cut(s) 342, 449, 1039, 1193, 1335, 1460, 1546, 1580
NciI CCSGG 3 cut(s) 528, 529, 2191
NdeI CATATG 1 cut(s) 595
NdeII GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
NlaIV GGNNCC 9 cut(s) 228, 325, 418, 474, 497, 498, 997, 1285, 1620
NmeAIII GCCGAG 2 cut(s) 203, 611
NmuCI GTSAC 4 cut(s) 98, 682, 709, 2056
PaeR7I CTCGAG 1 cut(s) 855
PceI AGGCCT 1 cut(s) 629
PciSI GCTCTTC 1 cut(s) 285
PcsI WCGNNNNNNNCGW 3 cut(s) 230, 291, 306
PdmI GAANNNNTTC 2 cut(s) 1308, 2048
PfeI GAWTC 6 cut(s) 235, 399, 590, 1606, 1851, 2166
Pfl23II CGTACG 1 cut(s) 657
PflFI GACNNNGTC 1 cut(s) 176
PkrI GCNGC 7 cut(s) 370, 942, 1032, 1044, 1198, 1582, 1639
Ple19I CGATCG 1 cut(s) 414
Ppu21I YACGTR 1 cut(s) 735
PpuMI RGGWCCY 1 cut(s) 496
PsiI TTATAA 1 cut(s) 798
Psp124BI GAGCTC 1 cut(s) 16
Psp5II RGGWCCY 1 cut(s) 496
Psp6I CCWGG 6 cut(s) 1396, 1540, 1684, 1707, 1738, 1834
PspGI CCWGG 6 cut(s) 1396, 1540, 1684, 1707, 1738, 1834
PspLI CGTACG 1 cut(s) 657
PspN4I GGNNCC 9 cut(s) 228, 325, 418, 474, 497, 498, 997, 1285, 1620
PspPI GGNCC 7 cut(s) 226, 496, 1148, 1283, 1328, 1492, 1619
PspPPI RGGWCCY 1 cut(s) 496
PspXI VCTCGAGB 1 cut(s) 855
PstI CTGCAG 2 cut(s) 1201, 1639
PsuI RGATCY 2 cut(s) 204, 2017
PsyI GACNNNGTC 1 cut(s) 176
PvuI CGATCG 1 cut(s) 414
RsaI GTAC 7 cut(s) 128, 395, 437, 659, 737, 881, 966
RsaNI GTAC 7 cut(s) 127, 394, 436, 658, 736, 880, 965
RseI CAYNNNNRTG 5 cut(s) 23, 94, 983, 1805, 2247
SacI GAGCTC 1 cut(s) 16
SapI GCTCTTC 1 cut(s) 285
SaqAI TTAA 5 cut(s) 362, 699, 842, 1413, 1931
SatI GCNGC 7 cut(s) 369, 941, 1031, 1043, 1197, 1581, 1638
Sau3AI GATC 9 cut(s) 64, 204, 411, 661, 829, 1435, 1729, 2017, 2258
Sau96I GGNCC 7 cut(s) 226, 496, 1148, 1283, 1328, 1492, 1619
ScrFI CCNGG 9 cut(s) 528, 529, 1398, 1542, 1686, 1709, 1740, 1836, 2191
SduI GDGCHC 4 cut(s) 16, 475, 1166, 2313
SfaNI GCATC 6 cut(s) 394, 889, 918, 940, 1674, 2107
SfcI CTRYAG 2 cut(s) 1197, 1635
Sfr274I CTCGAG 1 cut(s) 855
SinI GGWCC 5 cut(s) 496, 1148, 1283, 1492, 1619
SlaI CTCGAG 1 cut(s) 855
SmaI CCCGGG 1 cut(s) 529
SmiMI CAYNNNNRTG 5 cut(s) 23, 94, 983, 1805, 2247
SmlI CTYRAG 3 cut(s) 351, 623, 855
SmoI CTYRAG 3 cut(s) 351, 623, 855
Sse9I AATT 8 cut(s) 1009, 1596, 1701, 1984, 2030, 2044, 2204, 2210
SseBI AGGCCT 1 cut(s) 629
SsiI CCGC 2 cut(s) 366, 431
SspMI CTAG 6 cut(s) 426, 725, 1190, 1367, 1995, 2021
SstI GAGCTC 1 cut(s) 16
StuI AGGCCT 1 cut(s) 629
StyD4I CCNGG 9 cut(s) 526, 527, 1396, 1540, 1684, 1707, 1738, 1834, 2189
StyI CCWWGG 1 cut(s) 1641
TaaI ACNGT 6 cut(s) 328, 992, 1387, 1411, 2062, 2157
TaiI ACGT 4 cut(s) 300, 737, 890, 924
TaqI TCGA 5 cut(s) 574, 762, 856, 960, 2261
TaqII GACCGA 2 cut(s) 392, 1271
TasI AATT 8 cut(s) 1009, 1596, 1701, 1984, 2030, 2044, 2204, 2210
TatI WGTACW 2 cut(s) 435, 964
TfiI GAWTC 6 cut(s) 235, 399, 590, 1606, 1851, 2166
Tru1I TTAA 5 cut(s) 362, 699, 842, 1413, 1931
Tru9I TTAA 5 cut(s) 362, 699, 842, 1413, 1931
TscAI CASTG 6 cut(s) 784, 1032, 1392, 1573, 2065, 2109
TseFI GTSAC 4 cut(s) 98, 682, 709, 2056
TseI GCWGC 7 cut(s) 368, 940, 1030, 1042, 1196, 1580, 1637
Tsp45I GTSAC 4 cut(s) 98, 682, 709, 2056
TspDTI ATGAA 7 cut(s) 17, 84, 363, 582, 1917, 2203, 2309
TspGWI ACGGA 2 cut(s) 2094, 2121
TspMI CCCGGG 1 cut(s) 527
TspRI CASTG 6 cut(s) 784, 1032, 1392, 1573, 2065, 2109
Tth111I GACNNNGTC 1 cut(s) 176
VpaK11BI GGWCC 5 cut(s) 496, 1148, 1283, 1492, 1619
XapI RAATTY 5 cut(s) 1984, 2030, 2044, 2204, 2210
XbaI TCTAGA 1 cut(s) 1994
XhoI CTCGAG 1 cut(s) 855
XmaI CCCGGG 1 cut(s) 527
XmiI GTMKAC 2 cut(s) 1766, 1972
XmnI GAANNNNTTC 2 cut(s) 1308, 2048
XspI CTAG 6 cut(s) 426, 725, 1190, 1367, 1995, 2021
ZraI GACGTC 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.