Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007236.1

Orthogroup ID

OG0009747

Physical Location & Seq

Genomic Coordinates Forward (+)

3027 .. 10739

Gene Structure 7713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3006 bp

atgtcgaccttggccgatcccaaagcccaccaccatgaatttgttatccaagcaacaccagtgaagaggctgtgcaagacccacaacaccatcacagtgaacggacagttccctggaccaaccttggaagtaaacaatggcgacactctggtcgtcaaagtcactaacaaagctcgatataatgtcaccattcactggcatggcattcggcaaatgagaaccggatgggctgatgggcccgagtttgttactcaatgtcctattagaccaggagggagttacacctaccggtttacaatccaaggtcaagaaggtactctgtggtggcacgctcatagctcatggcttagagccactgtgtatggagcacttattattcatccgaaacaaggagactcgtatccattcactaaaccgaatcgtcaagcaacacttcttcttggtgagtggtgggatggtaaccctattgacgtggtgaggagggcaactcggacaggagcagctccaaatgtttctaacgcatataccattaacggcaccgtcatagttccaatagactctggtgagaccaacctactaagagtgataaatgccgccctcaaccaacctcttttcttctccgtcgccaaccataaactgactgtggttggtgctgatgcctcgtacaccaagcctttcaccaccaaagttctcatgctaggcccaggccagactactgatgttttaatcaccggggaccagccaccatctcgatactacttggcggcgagtgcctatttcagtgcacaaaatgctgcatttgacaacaccaccaccactgccattcttgaatacaagtccgttcgttgcaacacaacgagttgcaagggtaaaagagttttgacagctattggaaacttctgcatatgctctattgccataggaatggtaatagaactagtggttatgtatccaatacagcgtaggaagtacagggatgggattgacaatctcttggtgcttctcattggagggattccgattgctatgccaacagtgttgtcagttaccatggctattggttctcaccgcctgtccacacaaggcgctatcacaaagaggatgacagccattgaggagatggctggcatggatgtcctatgcagtgataagactgggaccctgactctcaacaagcttacagtagacaagaccatggtgtttgtaaaggatgttgacaaggatggtctcattttgctcggcgccagggcttcgagggttgagaatcaggacgctattgatacatgtattgttggaatgttgggcgaccccaaggaggccagggaaggtataactgaggtccactttttgccctttaatccagttgaaaagcgtacagccataacatacattgatgctgatggcaattggcaccgagttagcaaaggtgcaccggagcagatcattgacctctgcgagctaaaagacgatgcaaggaagaaagcacatgcaattattgacaagtttgcagatcgcggtctccgttcccttgctgttgctagacagactgtgccagaaaaaaacaaagagagtgctggaacaccatggcagtttgtaggcctcttgcctctctttgatcctcccaggcatgacagtgcagagaccattcgacgtgcccttcatcttggtgttaatgttaagatgatcactggtgaccaacttgccattggtaaggaaactggccgcagactcggcatgggaaccaacatgtatccttcttcttccctccttggtgaacacaaggacgagtctgttgcttccctccctattgatgagcttattgaaaaggctgatggctttgctggtgtcttcccagagcacaaatatgaaattgtgaagcggctgcaagacaggaagcatatttgtgggatgactggagatggtgtgaatgatgccccagcgctaaagaaggcagacattggtattgcagttgatgatgcaacggacgctgctcggagcgcctctgacattgtcctaaccgaaccaggattgtctgtgattatcagtgctgtgctgacaagcagagccattttccagaggatgaagaactacaccatctatgctgtttccatcacaattcgtgtcgtcctaggatttttgctccttgctcttatctggaagtttgacttctcacctttcatggttctcattattgccatacttaatgatggaacaatcatgactatttcaaaggatagggtgaagccatctcctcttccagactcatggaagctaaaggagatctttgccactggtatcgtccttggcacctacatggctgtcatgactgttgttttcttctgggctgctaatgattctgactttttctcagacaagtttggtgtaagatctatcagaggcagcgataaggagcttacggcagctgtctaccttcaagttagtattatcagtcaggcacttatctttgtcactcgatcccgaagctggtcttttgtagaacgccccggtgccatgctcatgattgccttttgcatagcacagctgcttgctacaattctcgctgtttatgcaaattggggctttgcaagaatcaaaggtatgggatggggatgggcaggtgttatctggctctacagcatcatcacctacataccattggatattctcaagttcataattcgatatgcattgagtggcaaggcctgggatactgtacttgagaataagactgccttcacaacaaagaaggattatggaaagggagagagggaagcacaatgggcaacagctcaacgaaccctgcatgggctgcagcctcctgaaacatctgaactcttcaatgacaagaacaactaccgagagctgtctgagatcgccgaacaggccaagaggcgagctgaagttgctaggttgagggagcttcatacactcaaggggcacgtggaatcggttgtcaaactcaaaggacttgacatcgacaccattcagcaacactacactgtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008553 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031090 GO:0034220 GO:0036442 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0099131 GO:0099132 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1001

Amino Acids

110.69

Weight (kDa)

8.99

Isoelectric Point (pI)

29.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	16 - 130	6.2e-45	Multicopper oxidase
Cu-oxidase	PF00394	143 - 279	6.3e-37	Multicopper oxidase
Hydrolase	PF00702	377 - 652	2.2e-12	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	437 - 543	8.9e-06	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80660 AT1G80660 AT1G80660 AT1G80660
fragaria_vesca	FvH4_6g28890
malus_domestica	MD09G1223600.v1.1
prunus_persica	Prupe.3G095900_v2.0.a1 Prupe.3G095900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133471
rosa_laevigata	RLG00000019336
rosa_multiflora	Rmu_sc0004887.1_g000004 Rmu_sc0007236.1_g000003
rosa_rugosa	Rorug02G0311900 Rorug02G0311900 Rorug02G0311900 Rorug02G0312000
rosa_samantha	Rh2AG364500 Rh2BG370200 Rh2CG347800 Rh2DG387200
rosa_wichuraiana	Rw2G029710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2606
AasI	GACNNNNNNGTC	1 cut(s)	149
Acc36I	ACCTGC	1 cut(s)	2606
AccB1I	GGYRCC	5 cut(s)	536, 1241, 1410, 2306, 2507
AccB7I	CCANNNNNTGG	1 cut(s)	195
AccI	GTMKAC	3 cut(s)	5, 1185, 2427
AccII	CGCG	1 cut(s)	1515
AciI	CCGC	6 cut(s)	594, 764, 1069, 1515, 1723, 1879
AclWI	GGATC	3 cut(s)	11, 1610, 2469
AcoI	YGGCCR	2 cut(s)	12, 1720
AcsI	RAATTY	1 cut(s)	38
AcuI	CTGAAG	1 cut(s)	2919
AcvI	CACGTG	1 cut(s)	2941
AcyI	GRCGYC	1 cut(s)	1242
AfaI	GTAC	5 cut(s)	316, 665, 971, 1375, 2715
AfeI	AGCGCT	1 cut(s)	1941
AfiI	CCNNNNNNNGG	5 cut(s)	195, 389, 1315, 2484, 2805
AflIII	ACRYGT	2 cut(s)	1283, 1746
AgeI	ACCGGT	1 cut(s)	288
AgsI	TTSAA	6 cut(s)	830, 1367, 1823, 2229, 2435, 2839
AhlI	ACTAGT	1 cut(s)	937
AjiI	CACGTC	2 cut(s)	472, 1652
AjnI	CCWGG	8 cut(s)	112, 268, 703, 1244, 1319, 1622, 2023, 2702
Alw21I	GWGCWC	4 cut(s)	370, 787, 1432, 1860
Alw26I	GTCTC	5 cut(s)	387, 560, 1232, 1523, 1634
Alw44I	GTGCAC	2 cut(s)	783, 1428
AlwI	GGATC	3 cut(s)	11, 1610, 2469
Ama87I	CYCGRG	1 cut(s)	239
Aor51HI	AGCGCT	1 cut(s)	1941
AoxI	GGCC	9 cut(s)	12, 236, 700, 706, 1317, 1597, 1720, 2700, 2883
ApaI	GGGCCC	1 cut(s)	240
ApaLI	GTGCAC	2 cut(s)	783, 1428
ApoI	RAATTY	1 cut(s)	38
AsiGI	ACCGGT	1 cut(s)	288
AspA2I	CCTAGG	1 cut(s)	2128
AspLEI	GCGC	4 cut(s)	1088, 1244, 1942, 2000
AspS9I	GGNCC	7 cut(s)	116, 236, 237, 701, 736, 1158, 1339
AsuC2I	CCSGG	2 cut(s)	733, 2505
AvaI	CYCGRG	1 cut(s)	239
AvaII	GGWCC	4 cut(s)	116, 736, 1158, 1339
AvrII	CCTAGG	1 cut(s)	2128
BaeGI	GKGCMC	5 cut(s)	240, 787, 1432, 1657, 2940
BanI	GGYRCC	5 cut(s)	536, 1241, 1410, 2306, 2507
BanII	GRGCYC	1 cut(s)	240
BbrPI	CACGTG	1 cut(s)	2941
BbsI	GAAGAC	1 cut(s)	1840
Bbv12I	GWGCWC	4 cut(s)	370, 787, 1432, 1860
BceAI	ACGGC	2 cut(s)	550, 2433
BcgI	CGANNNNNNTGC	6 cut(s)	188, 222, 1009, 1043, 1775, 1809
BciT130I	CCWGG	8 cut(s)	114, 270, 705, 1246, 1321, 1624, 2025, 2704
BciVI	GTATCC	4 cut(s)	411, 960, 1761, 2701
BclI	TGATCA	1 cut(s)	1683
BcnI	CCSGG	2 cut(s)	733, 2505
BcoDI	GTCTC	5 cut(s)	387, 560, 1232, 1523, 1634
BcuI	ACTAGT	1 cut(s)	937
BfaI	CTAG	5 cut(s)	698, 938, 1539, 2129, 2907
BfmI	CTRYAG	2 cut(s)	2632, 2810
BfoI	RGCGCY	4 cut(s)	1089, 1245, 1943, 2001
BfuAI	ACCTGC	1 cut(s)	2606
BfuI	GTATCC	4 cut(s)	411, 960, 1761, 2701
BglI	GCCNNNNNGGC	1 cut(s)	2882
BglII	AGATCT	2 cut(s)	2280, 2387
BlnI	CCTAGG	1 cut(s)	2128
Bme18I	GGWCC	4 cut(s)	116, 736, 1158, 1339
BmeT110I	CYCGRG	1 cut(s)	239
BmgBI	CACGTC	2 cut(s)	472, 1652
BmgT120I	GGNCC	7 cut(s)	116, 236, 237, 701, 736, 1158, 1339
BmrI	ACTGGG	1 cut(s)	1164
BmsI	GCATC	6 cut(s)	646, 1384, 1459, 1921, 1966, 2646
BmuI	ACTGGG	1 cut(s)	1164
BpiI	GAAGAC	1 cut(s)	1840
BplI	GAGNNNNNCTC	2 cut(s)	472, 504
BpmI	CTGGAG	1 cut(s)	1935
BpuEI	CTTGAG	3 cut(s)	2651, 2738, 2915
BpuMI	CCSGG	2 cut(s)	733, 2505
BsaAI	YACGTR	1 cut(s)	2941
BsaHI	GRCGYC	1 cut(s)	1242
BsaI	GGTCTC	4 cut(s)	560, 1232, 1523, 1634
BsaWI	WCCGGW	3 cut(s)	221, 288, 1432
BsaXI	ACNNNNNCTCC	2 cut(s)	1908, 1938
Bsc4I	CCNNNNNNNGG	5 cut(s)	195, 389, 1315, 2484, 2805
Bse118I	RCCGGY	1 cut(s)	288
Bse1I	ACTGG	8 cut(s)	59, 200, 1159, 1361, 1693, 1723, 1918, 2296
BseBI	CCWGG	8 cut(s)	114, 270, 705, 1246, 1321, 1624, 2025, 2704
BseLI	CCNNNNNNNGG	5 cut(s)	195, 389, 1315, 2484, 2805
BseMII	CTCAG	3 cut(s)	1326, 2382, 2859
BseNI	ACTGG	8 cut(s)	59, 200, 1159, 1361, 1693, 1723, 1918, 2296
BseRI	GAGGAG	3 cut(s)	493, 1130, 2241
BseSI	GKGCMC	5 cut(s)	240, 787, 1432, 1657, 2940
BseYI	CCCAGC	1 cut(s)	1936
BsgI	GTGCAG	1 cut(s)	1656
Bsh1236I	CGCG	1 cut(s)	1515
BshFI	GGCC	9 cut(s)	14, 238, 702, 708, 1319, 1599, 1722, 2702, 2885
BshNI	GGYRCC	5 cut(s)	536, 1241, 1410, 2306, 2507
BshTI	ACCGGT	1 cut(s)	288
BsiHKAI	GWGCWC	4 cut(s)	370, 787, 1432, 1860
BsiHKCI	CYCGRG	1 cut(s)	239
BsiSI	CCGG	5 cut(s)	222, 289, 732, 1433, 2505
BslFI	GGGAC	2 cut(s)	749, 1171
BslI	CCNNNNNNNGG	5 cut(s)	195, 389, 1315, 2484, 2805
BsmAI	GTCTC	5 cut(s)	387, 560, 1232, 1523, 1634
BsmFI	GGGAC	2 cut(s)	749, 1171
BsmI	GAATGC	1 cut(s)	204
BsnI	GGCC	9 cut(s)	14, 238, 702, 708, 1319, 1599, 1722, 2702, 2885
Bso31I	GGTCTC	4 cut(s)	560, 1232, 1523, 1634
BsoBI	CYCGRG	1 cut(s)	239
Bsp120I	GGGCCC	1 cut(s)	236
Bsp1286I	GDGCHC	7 cut(s)	240, 370, 787, 1432, 1657, 1860, 2940
Bsp143I	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
Bsp19I	CCATGG	3 cut(s)	1050, 1194, 1583
BspACI	CCGC	6 cut(s)	594, 764, 1069, 1515, 1723, 1879
BspANI	GGCC	9 cut(s)	14, 238, 702, 708, 1319, 1599, 1722, 2702, 2885
BspCNI	CTCAG	3 cut(s)	1327, 2381, 2860
BspFNI	CGCG	1 cut(s)	1515
BspHI	TCATGA	3 cut(s)	2217, 2322, 2517
BspMAI	CTGCAG	1 cut(s)	2814
BspMI	ACCTGC	1 cut(s)	2606
BspPI	GGATC	3 cut(s)	11, 1610, 2469
BspT107I	GGYRCC	5 cut(s)	536, 1241, 1410, 2306, 2507
BspTNI	GGTCTC	4 cut(s)	560, 1232, 1523, 1634
BsrFI	RCCGGY	1 cut(s)	288
BsrI	ACTGG	8 cut(s)	59, 200, 1159, 1361, 1693, 1723, 1918, 2296
BssAI	RCCGGY	1 cut(s)	288
BssMI	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
BssNI	GRCGYC	1 cut(s)	1242
Bst2UI	CCWGG	8 cut(s)	114, 270, 705, 1246, 1321, 1624, 2025, 2704
Bst6I	CTCTTC	3 cut(s)	59, 2259, 2840
BstACI	GRCGYC	1 cut(s)	1242
BstAPI	GCANNNNNTGC	2 cut(s)	791, 2809
BstBAI	YACGTR	1 cut(s)	2941
BstC8I	GCNNGC	5 cut(s)	330, 1126, 1457, 2547, 2895
BstDEI	CTNAG	5 cut(s)	347, 578, 1335, 2368, 2868
BstDSI	CCRYGG	3 cut(s)	1050, 1194, 1583
BstEII	GGTNACC	2 cut(s)	458, 1691
BstFNI	CGCG	1 cut(s)	1515
BstH2I	RGCGCY	4 cut(s)	1089, 1245, 1943, 2001
BstHHI	GCGC	4 cut(s)	1088, 1244, 1942, 2000
BstKTI	GATC	9 cut(s)	19, 1443, 1513, 1618, 1686, 2283, 2390, 2477, 2874
BstMAI	GTCTC	5 cut(s)	387, 560, 1232, 1523, 1634
BstMBI	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
BstNI	CCWGG	8 cut(s)	114, 270, 705, 1246, 1321, 1624, 2025, 2704
BstNSI	RCATGY	3 cut(s)	1287, 1490, 1750
BstPI	GGTNACC	2 cut(s)	458, 1691
BstSFI	CTRYAG	2 cut(s)	2632, 2810
BstSLI	GKGCMC	5 cut(s)	240, 787, 1432, 1657, 2940
BstUI	CGCG	1 cut(s)	1515
BstV2I	GAAGAC	1 cut(s)	1840
BstX2I	RGATCY	2 cut(s)	2280, 2387
BstXI	CCANNNNNNTGG	2 cut(s)	925, 2265
BstYI	RGATCY	2 cut(s)	2280, 2387
BsuI	GTATCC	4 cut(s)	411, 960, 1761, 2701
BsuRI	GGCC	9 cut(s)	14, 238, 702, 708, 1319, 1599, 1722, 2702, 2885
BtgI	CCRYGG	3 cut(s)	1050, 1194, 1583
BtrI	CACGTC	2 cut(s)	472, 1652
BtsI	GCAGTG	2 cut(s)	816, 1150
BveI	ACCTGC	1 cut(s)	2606
Cac8I	GCNNGC	5 cut(s)	330, 1126, 1457, 2547, 2895
CciI	TCATGA	3 cut(s)	2217, 2322, 2517
CfoI	GCGC	4 cut(s)	1088, 1244, 1942, 2000
Cfr10I	RCCGGY	1 cut(s)	288
Cfr13I	GGNCC	7 cut(s)	116, 236, 237, 701, 736, 1158, 1339
CseI	GACGC	2 cut(s)	1280, 1994
Csp6I	GTAC	5 cut(s)	315, 664, 970, 1374, 2714
CspAI	ACCGGT	1 cut(s)	288
CviQI	GTAC	5 cut(s)	315, 664, 970, 1374, 2714
DdeI	CTNAG	5 cut(s)	347, 578, 1335, 2368, 2868
DinI	GGCGCC	1 cut(s)	1243
DpnI	GATC	9 cut(s)	18, 1442, 1512, 1617, 1685, 2282, 2389, 2476, 2873
DpnII	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
EaeI	YGGCCR	2 cut(s)	12, 1720
Eam1104I	CTCTTC	3 cut(s)	59, 2259, 2840
EarI	CTCTTC	3 cut(s)	59, 2259, 2840
Eco147I	AGGCCT	2 cut(s)	1599, 2702
Eco24I	GRGCYC	1 cut(s)	240
Eco31I	GGTCTC	4 cut(s)	560, 1232, 1523, 1634
Eco47I	GGWCC	4 cut(s)	116, 736, 1158, 1339
Eco47III	AGCGCT	1 cut(s)	1941
Eco57I	CTGAAG	1 cut(s)	2919
Eco72I	CACGTG	1 cut(s)	2941
Eco88I	CYCGRG	1 cut(s)	239
Eco91I	GGTNACC	2 cut(s)	458, 1691
EcoO109I	RGGNCCY	1 cut(s)	1158
EcoO65I	GGTNACC	2 cut(s)	458, 1691
EcoRII	CCWGG	8 cut(s)	112, 268, 703, 1244, 1319, 1622, 2023, 2702
EcoT22I	ATGCAT	1 cut(s)	2689
EcoT38I	GRGCYC	1 cut(s)	240
EgeI	GGCGCC	1 cut(s)	1243
EheI	GGCGCC	1 cut(s)	1243
FaqI	GGGAC	2 cut(s)	749, 1171
FauNDI	CATATG	1 cut(s)	905
FbaI	TGATCA	1 cut(s)	1683
FblI	GTMKAC	3 cut(s)	5, 1185, 2427
FriOI	GRGCYC	1 cut(s)	240
FspBI	CTAG	5 cut(s)	698, 938, 1539, 2129, 2907
GlaI	GCGC	4 cut(s)	1087, 1243, 1941, 1999
GsaI	CCCAGC	1 cut(s)	1940
GsuI	CTGGAG	1 cut(s)	1935
HaeII	RGCGCY	4 cut(s)	1089, 1245, 1943, 2001
HaeIII	GGCC	9 cut(s)	14, 238, 702, 708, 1319, 1599, 1722, 2702, 2885
HapII	CCGG	5 cut(s)	222, 289, 732, 1433, 2505
HgaI	GACGC	2 cut(s)	1280, 1994
HhaI	GCGC	4 cut(s)	1088, 1244, 1942, 2000
Hin1I	GRCGYC	1 cut(s)	1242
Hin6I	GCGC	4 cut(s)	1086, 1242, 1940, 1998
HinP1I	GCGC	4 cut(s)	1086, 1242, 1940, 1998
HincII	GTYRAC	2 cut(s)	6, 1216
HindII	GTYRAC	2 cut(s)	6, 1216
HindIII	AAGCTT	1 cut(s)	1175
HpaII	CCGG	5 cut(s)	222, 289, 732, 1433, 2505
Hpy99I	CGWCG	2 cut(s)	626, 1653
HpyAV	CCTTC	8 cut(s)	305, 1319, 1667, 1764, 1942, 2441, 2740, 2743
HpyCH4IV	ACGT	3 cut(s)	471, 1651, 2940
HpyF3I	CTNAG	5 cut(s)	347, 578, 1335, 2368, 2868
HpySE526I	ACGT	3 cut(s)	471, 1651, 2940
Hsp92I	GRCGYC	1 cut(s)	1242
HspAI	GCGC	4 cut(s)	1086, 1242, 1940, 1998
KasI	GGCGCC	1 cut(s)	1241
KflI	GGGWCCC	1 cut(s)	1158
Ksp22I	TGATCA	1 cut(s)	1683
Kzo9I	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
LmnI	GCTCC	8 cut(s)	365, 497, 508, 1435, 1995, 2145, 2410, 2917
LweI	GCATC	6 cut(s)	646, 1384, 1459, 1921, 1966, 2646
MaeI	CTAG	5 cut(s)	698, 938, 1539, 2129, 2907
MaeII	ACGT	3 cut(s)	471, 1651, 2940
MaeIII	GTNAC	8 cut(s)	160, 184, 247, 278, 458, 1045, 1691, 2467
MalI	GATC	9 cut(s)	18, 1442, 1512, 1617, 1685, 2282, 2389, 2476, 2873
MboI	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
MfeI	CAATTG	1 cut(s)	1405
MflI	RGATCY	2 cut(s)	2280, 2387
MhlI	GDGCHC	7 cut(s)	240, 370, 787, 1432, 1657, 1860, 2940
MluCI	AATT	8 cut(s)	38, 1405, 1491, 1869, 2115, 2553, 2572, 2676
Mly113I	GGCGCC	1 cut(s)	1242
MlyI	GAGTC	6 cut(s)	389, 551, 1159, 1722, 1796, 2255
MmeI	TCCRAC	1 cut(s)	1273
Mph1103I	ATGCAT	1 cut(s)	2689
MseI	TTAA	6 cut(s)	531, 725, 1356, 1671, 1677, 2202
MspA1I	CMGCKG	2 cut(s)	2423, 2542
MspI	CCGG	5 cut(s)	222, 289, 732, 1433, 2505
MunI	CAATTG	1 cut(s)	1405
Mva1269I	GAATGC	1 cut(s)	204
MvaI	CCWGG	8 cut(s)	114, 270, 705, 1246, 1321, 1624, 2025, 2704
MvnI	CGCG	1 cut(s)	1515
NarI	GGCGCC	1 cut(s)	1242
NciI	CCSGG	2 cut(s)	733, 2505
NcoI	CCATGG	3 cut(s)	1050, 1194, 1583
NdeI	CATATG	1 cut(s)	905
NdeII	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
NmeAIII	GCCGAG	2 cut(s)	1218, 1710
NmuCI	GTSAC	4 cut(s)	160, 184, 1691, 2467
NsiI	ATGCAT	1 cut(s)	2689
NspI	RCATGY	3 cut(s)	1287, 1490, 1750
PagI	TCATGA	3 cut(s)	2217, 2322, 2517
PaqCI	CACCTGC	1 cut(s)	2606
PceI	AGGCCT	2 cut(s)	1599, 2702
PciI	ACATGT	2 cut(s)	1283, 1746
PcsI	WCGNNNNNNNCGW	1 cut(s)	1519
PctI	GAATGC	1 cut(s)	204
PfeI	GAWTC	6 cut(s)	418, 1015, 1264, 2354, 2589, 2945
PflFI	GACNNNGTC	1 cut(s)	2009
PflMI	CCANNNNNTGG	1 cut(s)	195
PinAI	ACCGGT	1 cut(s)	288
PleI	GAGTC	6 cut(s)	389, 551, 1159, 1722, 1795, 2255
PluTI	GGCGCC	1 cut(s)	1245
PmaCI	CACGTG	1 cut(s)	2941
PmlI	CACGTG	1 cut(s)	2941
PpsI	GAGTC	6 cut(s)	389, 551, 1159, 1722, 1795, 2255
Ppu21I	YACGTR	1 cut(s)	2941
PpuMI	RGGWCCY	1 cut(s)	1158
PscI	ACATGT	2 cut(s)	1283, 1746
Psp5II	RGGWCCY	1 cut(s)	1158
Psp6I	CCWGG	8 cut(s)	112, 268, 703, 1244, 1319, 1622, 2023, 2702
PspCI	CACGTG	1 cut(s)	2941
PspEI	GGTNACC	2 cut(s)	458, 1691
PspFI	CCCAGC	1 cut(s)	1936
PspGI	CCWGG	8 cut(s)	112, 268, 703, 1244, 1319, 1622, 2023, 2702
PspOMI	GGGCCC	1 cut(s)	236
PspPI	GGNCC	7 cut(s)	116, 236, 237, 701, 736, 1158, 1339
PspPPI	RGGWCCY	1 cut(s)	1158
PstI	CTGCAG	1 cut(s)	2814
PsuI	RGATCY	2 cut(s)	2280, 2387
PsyI	GACNNNGTC	1 cut(s)	2009
PvuII	CAGCTG	2 cut(s)	2423, 2542
RsaI	GTAC	5 cut(s)	316, 665, 971, 1375, 2715
RsaNI	GTAC	5 cut(s)	315, 664, 970, 1374, 2714
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	6 cut(s)	531, 725, 1356, 1671, 1677, 2202
Sau3AI	GATC	9 cut(s)	16, 1440, 1510, 1615, 1683, 2280, 2387, 2474, 2871
Sau96I	GGNCC	7 cut(s)	116, 236, 237, 701, 736, 1158, 1339
SchI	GAGTC	6 cut(s)	389, 551, 1159, 1722, 1796, 2255
SduI	GDGCHC	7 cut(s)	240, 370, 787, 1432, 1657, 1860, 2940
SfaNI	GCATC	6 cut(s)	646, 1384, 1459, 1921, 1966, 2646
SfcI	CTRYAG	2 cut(s)	2632, 2810
SfoI	GGCGCC	1 cut(s)	1243
SinI	GGWCC	4 cut(s)	116, 736, 1158, 1339
SmlI	CTYRAG	3 cut(s)	2666, 2717, 2930
SmoI	CTYRAG	3 cut(s)	2666, 2717, 2930
SpeI	ACTAGT	1 cut(s)	937
Sse9I	AATT	8 cut(s)	38, 1405, 1491, 1869, 2115, 2553, 2572, 2676
SseBI	AGGCCT	2 cut(s)	1599, 2702
SsiI	CCGC	6 cut(s)	594, 764, 1069, 1515, 1723, 1879
SspDI	GGCGCC	1 cut(s)	1241
SspMI	CTAG	5 cut(s)	698, 938, 1539, 2129, 2907
StuI	AGGCCT	2 cut(s)	1599, 2702
TaiI	ACGT	3 cut(s)	474, 1654, 2943
TaqI	TCGA	8 cut(s)	5, 175, 751, 1253, 1648, 2473, 2680, 2976
TasI	AATT	8 cut(s)	38, 1405, 1491, 1869, 2115, 2553, 2572, 2676
TatI	WGTACW	2 cut(s)	969, 2713
TauI	GCSGC	4 cut(s)	596, 767, 1725, 1882
TfiI	GAWTC	6 cut(s)	418, 1015, 1264, 2354, 2589, 2945
Tru1I	TTAA	6 cut(s)	531, 725, 1356, 1671, 1677, 2202
Tru9I	TTAA	6 cut(s)	531, 725, 1356, 1671, 1677, 2202
TseFI	GTSAC	4 cut(s)	160, 184, 1691, 2467
Tsp45I	GTSAC	4 cut(s)	160, 184, 1691, 2467
TspDTI	ATGAA	8 cut(s)	51, 368, 1649, 1881, 2096, 2167, 2662, 2912
TspGWI	ACGGA	5 cut(s)	117, 610, 829, 1511, 1997
Tth111I	GACNNNGTC	1 cut(s)	2009
Van91I	CCANNNNNTGG	1 cut(s)	195
VneI	GTGCAC	2 cut(s)	783, 1428
VpaK11BI	GGWCC	4 cut(s)	116, 736, 1158, 1339
XapI	RAATTY	1 cut(s)	38
XceI	RCATGY	3 cut(s)	1287, 1490, 1750
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1117, 1703
XmaJI	CCTAGG	1 cut(s)	2128
XmiI	GTMKAC	3 cut(s)	5, 1185, 2427
XspI	CTAG	5 cut(s)	698, 938, 1539, 2129, 2907
Zsp2I	ATGCAT	1 cut(s)	2689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.