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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g29841 |
| rosa_multiflora | Rmu_sc0007408.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00235700 |
| rosa_samantha | Rh2CG299200 Rh2CG367200 Rh2DG336500 Rh6CG404700 Rh7BG351000 Rh7DG355900 |
| rosa_wichuraiana | Rw7G030660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 337 |
| AcuI | CTGAAG | 1 cut(s) | 105 |
| AfaI | GTAC | 1 cut(s) | 67 |
| AluBI | AGCT | 3 cut(s) | 163, 182, 275 |
| AluI | AGCT | 3 cut(s) | 163, 182, 275 |
| Alw26I | GTCTC | 2 cut(s) | 32, 89 |
| ApeKI | GCWGC | 2 cut(s) | 179, 286 |
| ApoI | RAATTY | 1 cut(s) | 337 |
| AspLEI | GCGC | 1 cut(s) | 258 |
| AsuHPI | GGTGA | 4 cut(s) | 3, 15, 24, 377 |
| BbvI | GCAGC | 2 cut(s) | 191, 298 |
| BccI | CCATC | 1 cut(s) | 37 |
| BclI | TGATCA | 2 cut(s) | 310, 355 |
| BcoDI | GTCTC | 2 cut(s) | 32, 89 |
| BfaI | CTAG | 2 cut(s) | 45, 164 |
| BfmI | CTRYAG | 1 cut(s) | 284 |
| BisI | GCNGC | 2 cut(s) | 180, 287 |
| BlsI | GCNGC | 2 cut(s) | 181, 288 |
| BpmI | CTGGAG | 1 cut(s) | 120 |
| BsaI | GGTCTC | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 381 |
| BseDI | CCNNGG | 1 cut(s) | 381 |
| BseGI | GGATG | 6 cut(s) | 10, 313, 358, 397, 403, 409 |
| BseMII | CTCAG | 2 cut(s) | 99, 429 |
| BseXI | GCAGC | 2 cut(s) | 191, 298 |
| BsmAI | GTCTC | 2 cut(s) | 32, 89 |
| Bso31I | GGTCTC | 1 cut(s) | 32 |
| Bsp143I | GATC | 2 cut(s) | 310, 355 |
| BspCNI | CTCAG | 2 cut(s) | 100, 428 |
| BspMAI | CTGCAG | 1 cut(s) | 288 |
| BspTNI | GGTCTC | 1 cut(s) | 32 |
| BssECI | CCNNGG | 1 cut(s) | 381 |
| BssMI | GATC | 2 cut(s) | 310, 355 |
| Bst4CI | ACNGT | 1 cut(s) | 21 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 176 |
| BstC8I | GCNNGC | 1 cut(s) | 273 |
| BstDEI | CTNAG | 2 cut(s) | 108, 415 |
| BstF5I | GGATG | 6 cut(s) | 10, 313, 358, 397, 403, 409 |
| BstHHI | GCGC | 1 cut(s) | 258 |
| BstKTI | GATC | 2 cut(s) | 313, 358 |
| BstMAI | GTCTC | 2 cut(s) | 32, 89 |
| BstMBI | GATC | 2 cut(s) | 310, 355 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 176, 295 |
| BstSFI | CTRYAG | 1 cut(s) | 284 |
| BstV1I | GCAGC | 2 cut(s) | 191, 298 |
| BtgZI | GCGATG | 1 cut(s) | 63 |
| BtsCI | GGATG | 6 cut(s) | 10, 313, 358, 397, 403, 409 |
| BtsIMutI | CAGTG | 1 cut(s) | 17 |
| Cac8I | GCNNGC | 1 cut(s) | 273 |
| CfoI | GCGC | 1 cut(s) | 258 |
| Csp6I | GTAC | 1 cut(s) | 66 |
| CviAII | CATG | 1 cut(s) | 388 |
| CviJI | RGCY | 3 cut(s) | 163, 182, 275 |
| CviKI_1 | RGCY | 3 cut(s) | 163, 182, 275 |
| CviQI | GTAC | 1 cut(s) | 66 |
| DdeI | CTNAG | 2 cut(s) | 108, 415 |
| DpnI | GATC | 2 cut(s) | 312, 357 |
| DpnII | GATC | 2 cut(s) | 310, 355 |
| Eco31I | GGTCTC | 1 cut(s) | 32 |
| Eco57I | CTGAAG | 1 cut(s) | 105 |
| FaeI | CATG | 1 cut(s) | 391 |
| FaiI | YATR | 4 cut(s) | 189, 260, 360, 389 |
| FatI | CATG | 1 cut(s) | 387 |
| FbaI | TGATCA | 2 cut(s) | 310, 355 |
| Fnu4HI | GCNGC | 2 cut(s) | 180, 287 |
| FokI | GGATG | 6 cut(s) | 17, 320, 365, 404, 410, 416 |
| Fsp4HI | GCNGC | 2 cut(s) | 180, 287 |
| FspBI | CTAG | 2 cut(s) | 45, 164 |
| GlaI | GCGC | 1 cut(s) | 257 |
| GluI | GCNGC | 2 cut(s) | 180, 287 |
| GsuI | CTGGAG | 1 cut(s) | 120 |
| HhaI | GCGC | 1 cut(s) | 258 |
| Hin1II | CATG | 1 cut(s) | 391 |
| Hin6I | GCGC | 1 cut(s) | 256 |
| HinP1I | GCGC | 1 cut(s) | 256 |
| HinfI | GANTC | 6 cut(s) | 104, 113, 302, 347, 371, 413 |
| HphI | GGTGA | 4 cut(s) | 3, 15, 24, 377 |
| Hpy188I | TCNGA | 5 cut(s) | 109, 251, 307, 352, 418 |
| Hpy188III | TCNNGA | 2 cut(s) | 122, 137 |
| Hpy99I | CGWCG | 1 cut(s) | 431 |
| HpyAV | CCTTC | 1 cut(s) | 80 |
| HpyCH4III | ACNGT | 1 cut(s) | 21 |
| HpyCH4IV | ACGT | 1 cut(s) | 435 |
| HpyCH4V | TGCA | 6 cut(s) | 179, 229, 245, 286, 298, 331 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 176, 295 |
| HpyF3I | CTNAG | 2 cut(s) | 108, 415 |
| HpySE526I | ACGT | 1 cut(s) | 435 |
| Hsp92II | CATG | 1 cut(s) | 391 |
| HspAI | GCGC | 1 cut(s) | 256 |
| Ksp22I | TGATCA | 2 cut(s) | 310, 355 |
| Kzo9I | GATC | 2 cut(s) | 310, 355 |
| LmnI | GCTCC | 1 cut(s) | 160 |
| LpnPI | CCDG | 3 cut(s) | 48, 96, 150 |
| Lsp1109I | GCAGC | 2 cut(s) | 191, 298 |
| MaeI | CTAG | 2 cut(s) | 45, 164 |
| MaeII | ACGT | 1 cut(s) | 435 |
| MaeIII | GTNAC | 1 cut(s) | 21 |
| MalI | GATC | 2 cut(s) | 312, 357 |
| MboI | GATC | 2 cut(s) | 310, 355 |
| MboII | GAAGA | 2 cut(s) | 89, 356 |
| MluCI | AATT | 1 cut(s) | 337 |
| MlyI | GAGTC | 3 cut(s) | 98, 365, 407 |
| MmeI | TCCRAC | 1 cut(s) | 172 |
| MnlI | CCTC | 9 cut(s) | 36, 46, 52, 103, 144, 184, 376, 388, 394 |
| MseI | TTAA | 1 cut(s) | 266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 363 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 176, 295 |
| NdeII | GATC | 2 cut(s) | 310, 355 |
| NlaIII | CATG | 1 cut(s) | 391 |
| NmeAIII | GCCGAG | 1 cut(s) | 406 |
| NmuCI | GTSAC | 1 cut(s) | 21 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 432 |
| PfeI | GAWTC | 3 cut(s) | 113, 302, 347 |
| PkrI | GCNGC | 2 cut(s) | 181, 288 |
| PleI | GAGTC | 3 cut(s) | 98, 365, 407 |
| PpsI | GAGTC | 3 cut(s) | 98, 365, 407 |
| PstI | CTGCAG | 1 cut(s) | 288 |
| RsaI | GTAC | 1 cut(s) | 67 |
| RsaNI | GTAC | 1 cut(s) | 66 |
| RseI | CAYNNNNRTG | 1 cut(s) | 363 |
| SaqAI | TTAA | 1 cut(s) | 266 |
| SatI | GCNGC | 2 cut(s) | 180, 287 |
| Sau3AI | GATC | 2 cut(s) | 310, 355 |
| SchI | GAGTC | 3 cut(s) | 98, 365, 407 |
| SetI | ASST | 9 cut(s) | 28, 44, 85, 136, 165, 184, 266, 277, 438 |
| SfcI | CTRYAG | 1 cut(s) | 284 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 363 |
| Sse9I | AATT | 1 cut(s) | 337 |
| SspMI | CTAG | 2 cut(s) | 45, 164 |
| TaaI | ACNGT | 1 cut(s) | 21 |
| TaiI | ACGT | 1 cut(s) | 438 |
| TasI | AATT | 1 cut(s) | 337 |
| TfiI | GAWTC | 3 cut(s) | 113, 302, 347 |
| Tru1I | TTAA | 1 cut(s) | 266 |
| Tru9I | TTAA | 1 cut(s) | 266 |
| TscAI | CASTG | 1 cut(s) | 24 |
| TseFI | GTSAC | 1 cut(s) | 21 |
| TseI | GCWGC | 2 cut(s) | 179, 286 |
| Tsp45I | GTSAC | 1 cut(s) | 21 |
| TspRI | CASTG | 1 cut(s) | 24 |
| XapI | RAATTY | 1 cut(s) | 337 |
| XspI | CTAG | 2 cut(s) | 45, 164 |