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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g29841 |
| rosa_multiflora | Rmu_sc0007408.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00235700 |
| rosa_samantha | Rh2CG299200 Rh2CG367200 Rh2DG336500 Rh6CG404700 Rh7BG351000 Rh7DG355900 |
| rosa_wichuraiana | Rw7G030660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 84 |
| AccII | CGCG | 1 cut(s) | 249 |
| AciI | CCGC | 4 cut(s) | 231, 244, 249, 267 |
| AgsI | TTSAA | 1 cut(s) | 29 |
| AluBI | AGCT | 2 cut(s) | 15, 228 |
| AluI | AGCT | 2 cut(s) | 15, 228 |
| Ama87I | CYCGRG | 1 cut(s) | 155 |
| AoxI | GGCC | 2 cut(s) | 136, 197 |
| ApeKI | GCWGC | 7 cut(s) | 118, 121, 124, 168, 179, 228, 257 |
| AspLEI | GCGC | 1 cut(s) | 249 |
| AvaI | CYCGRG | 1 cut(s) | 155 |
| BanI | GGYRCC | 1 cut(s) | 84 |
| BbvI | GCAGC | 7 cut(s) | 130, 133, 136, 155, 191, 215, 244 |
| BccI | CCATC | 3 cut(s) | 52, 178, 228 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 123, 136, 157, 170 |
| BfaI | CTAG | 1 cut(s) | 68 |
| BisI | GCNGC | 8 cut(s) | 119, 122, 125, 169, 180, 229, 245, 258 |
| BlsI | GCNGC | 8 cut(s) | 120, 123, 126, 170, 181, 230, 246, 259 |
| BmeT110I | CYCGRG | 1 cut(s) | 155 |
| BmiI | GGNNCC | 1 cut(s) | 86 |
| BmsI | GCATC | 2 cut(s) | 105, 254 |
| BpmI | CTGGAG | 1 cut(s) | 214 |
| Bse118I | RCCGGY | 2 cut(s) | 138, 199 |
| Bse1I | ACTGG | 1 cut(s) | 197 |
| BseGI | GGATG | 3 cut(s) | 120, 239, 243 |
| BseNI | ACTGG | 1 cut(s) | 197 |
| BseXI | GCAGC | 7 cut(s) | 130, 133, 136, 155, 191, 215, 244 |
| BsgI | GTGCAG | 2 cut(s) | 153, 166 |
| Bsh1236I | CGCG | 1 cut(s) | 249 |
| Bsh1285I | CGRYCG | 1 cut(s) | 143 |
| BshFI | GGCC | 2 cut(s) | 138, 199 |
| BshNI | GGYRCC | 1 cut(s) | 84 |
| BsiEI | CGRYCG | 1 cut(s) | 143 |
| BsiHKCI | CYCGRG | 1 cut(s) | 155 |
| BsiSI | CCGG | 2 cut(s) | 139, 200 |
| BsnI | GGCC | 2 cut(s) | 138, 199 |
| BsoBI | CYCGRG | 1 cut(s) | 155 |
| Bsp143I | GATC | 1 cut(s) | 70 |
| BspACI | CCGC | 4 cut(s) | 231, 244, 249, 267 |
| BspANI | GGCC | 2 cut(s) | 138, 199 |
| BspFNI | CGCG | 1 cut(s) | 249 |
| BspLI | GGNNCC | 1 cut(s) | 86 |
| BspT107I | GGYRCC | 1 cut(s) | 84 |
| BsrFI | RCCGGY | 2 cut(s) | 138, 199 |
| BsrI | ACTGG | 1 cut(s) | 197 |
| BssAI | RCCGGY | 2 cut(s) | 138, 199 |
| BssMI | GATC | 1 cut(s) | 70 |
| BstC8I | GCNNGC | 1 cut(s) | 136 |
| BstF5I | GGATG | 3 cut(s) | 120, 239, 243 |
| BstFNI | CGCG | 1 cut(s) | 249 |
| BstHHI | GCGC | 1 cut(s) | 249 |
| BstKTI | GATC | 1 cut(s) | 73 |
| BstMBI | GATC | 1 cut(s) | 70 |
| BstMCI | CGRYCG | 1 cut(s) | 143 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 124, 144, 185 |
| BstUI | CGCG | 1 cut(s) | 249 |
| BstV1I | GCAGC | 7 cut(s) | 130, 133, 136, 155, 191, 215, 244 |
| BsuRI | GGCC | 2 cut(s) | 138, 199 |
| BtgZI | GCGATG | 1 cut(s) | 197 |
| BtsCI | GGATG | 3 cut(s) | 120, 239, 243 |
| Cac8I | GCNNGC | 1 cut(s) | 136 |
| CfoI | GCGC | 1 cut(s) | 249 |
| Cfr10I | RCCGGY | 2 cut(s) | 138, 199 |
| DpnI | GATC | 1 cut(s) | 72 |
| DpnII | GATC | 1 cut(s) | 70 |
| Eco88I | CYCGRG | 1 cut(s) | 155 |
| FaiI | YATR | 1 cut(s) | 22 |
| FauI | CCCGC | 2 cut(s) | 242, 260 |
| Fnu4HI | GCNGC | 8 cut(s) | 119, 122, 125, 169, 180, 229, 245, 258 |
| FokI | GGATG | 3 cut(s) | 127, 246, 250 |
| Fsp4HI | GCNGC | 8 cut(s) | 119, 122, 125, 169, 180, 229, 245, 258 |
| FspBI | CTAG | 1 cut(s) | 68 |
| GlaI | GCGC | 1 cut(s) | 248 |
| GluI | GCNGC | 8 cut(s) | 119, 122, 125, 169, 180, 229, 245, 258 |
| GsuI | CTGGAG | 1 cut(s) | 214 |
| HaeIII | GGCC | 2 cut(s) | 138, 199 |
| HapII | CCGG | 2 cut(s) | 139, 200 |
| HhaI | GCGC | 1 cut(s) | 249 |
| Hin6I | GCGC | 1 cut(s) | 247 |
| HinP1I | GCGC | 1 cut(s) | 247 |
| HinfI | GANTC | 2 cut(s) | 25, 36 |
| HpaII | CCGG | 2 cut(s) | 139, 200 |
| Hpy188III | TCNNGA | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 4 cut(s) | 118, 134, 147, 260 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 124, 144, 185 |
| HspAI | GCGC | 1 cut(s) | 247 |
| Kzo9I | GATC | 1 cut(s) | 70 |
| LpnPI | CCDG | 7 cut(s) | 120, 152, 161, 178, 190, 195, 213 |
| Lsp1109I | GCAGC | 7 cut(s) | 130, 133, 136, 155, 191, 215, 244 |
| LweI | GCATC | 2 cut(s) | 105, 254 |
| MaeI | CTAG | 1 cut(s) | 68 |
| MalI | GATC | 1 cut(s) | 72 |
| MboI | GATC | 1 cut(s) | 70 |
| MboII | GAAGA | 4 cut(s) | 64, 226, 229, 232 |
| MluCI | AATT | 1 cut(s) | 95 |
| MnlI | CCTC | 2 cut(s) | 42, 189 |
| MseI | TTAA | 1 cut(s) | 280 |
| MspA1I | CMGCKG | 1 cut(s) | 228 |
| MspI | CCGG | 2 cut(s) | 139, 200 |
| MvnI | CGCG | 1 cut(s) | 249 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 124, 144, 185 |
| NdeII | GATC | 1 cut(s) | 70 |
| NlaIV | GGNNCC | 1 cut(s) | 86 |
| NmeAIII | GCCGAG | 1 cut(s) | 113 |
| PfeI | GAWTC | 2 cut(s) | 25, 36 |
| PkrI | GCNGC | 8 cut(s) | 120, 123, 126, 170, 181, 230, 246, 259 |
| PspN4I | GGNNCC | 1 cut(s) | 86 |
| PvuII | CAGCTG | 1 cut(s) | 228 |
| SaqAI | TTAA | 1 cut(s) | 280 |
| SatI | GCNGC | 8 cut(s) | 119, 122, 125, 169, 180, 229, 245, 258 |
| Sau3AI | GATC | 1 cut(s) | 70 |
| SetI | ASST | 2 cut(s) | 17, 230 |
| SfaNI | GCATC | 2 cut(s) | 105, 254 |
| Sse9I | AATT | 1 cut(s) | 95 |
| SsiI | CCGC | 4 cut(s) | 231, 244, 249, 267 |
| SspMI | CTAG | 1 cut(s) | 68 |
| TaqI | TCGA | 1 cut(s) | 44 |
| TasI | AATT | 1 cut(s) | 95 |
| TauI | GCSGC | 1 cut(s) | 247 |
| TfiI | GAWTC | 2 cut(s) | 25, 36 |
| Tru1I | TTAA | 1 cut(s) | 280 |
| Tru9I | TTAA | 1 cut(s) | 280 |
| TseI | GCWGC | 7 cut(s) | 118, 121, 124, 168, 179, 228, 257 |
| XbaI | TCTAGA | 1 cut(s) | 67 |
| XspI | CTAG | 1 cut(s) | 68 |