No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g29841 |
| rosa_multiflora | Rmu_sc0007408.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00235700 |
| rosa_samantha | Rh2CG299200 Rh2CG367200 Rh2DG336500 Rh6CG404700 Rh7BG351000 Rh7DG355900 |
| rosa_wichuraiana | Rw7G030660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 201 |
| AfaI | GTAC | 2 cut(s) | 56, 163 |
| AgsI | TTSAA | 1 cut(s) | 40 |
| AleI | CACNNNNGTG | 1 cut(s) | 31 |
| AluBI | AGCT | 1 cut(s) | 277 |
| AluI | AGCT | 1 cut(s) | 277 |
| Alw26I | GTCTC | 1 cut(s) | 128 |
| Ama87I | CYCGRG | 2 cut(s) | 29, 202 |
| AoxI | GGCC | 1 cut(s) | 42 |
| ApeKI | GCWGC | 1 cut(s) | 274 |
| AsuHPI | GGTGA | 4 cut(s) | 84, 96, 111, 120 |
| AvaI | CYCGRG | 2 cut(s) | 29, 202 |
| BccI | CCATC | 1 cut(s) | 133 |
| BcoDI | GTCTC | 1 cut(s) | 128 |
| BisI | GCNGC | 1 cut(s) | 275 |
| BlsI | GCNGC | 1 cut(s) | 276 |
| BmeT110I | CYCGRG | 2 cut(s) | 29, 202 |
| BpmI | CTGGAG | 1 cut(s) | 124 |
| BsaI | GGTCTC | 1 cut(s) | 128 |
| BshFI | GGCC | 1 cut(s) | 44 |
| BsiHKCI | CYCGRG | 2 cut(s) | 29, 202 |
| BsmAI | GTCTC | 1 cut(s) | 128 |
| BsnI | GGCC | 1 cut(s) | 44 |
| Bso31I | GGTCTC | 1 cut(s) | 128 |
| BsoBI | CYCGRG | 2 cut(s) | 29, 202 |
| Bsp1407I | TGTACA | 1 cut(s) | 54 |
| BspANI | GGCC | 1 cut(s) | 44 |
| BspTNI | GGTCTC | 1 cut(s) | 128 |
| BsrGI | TGTACA | 1 cut(s) | 54 |
| Bst4CI | ACNGT | 1 cut(s) | 117 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 271 |
| BstAUI | TGTACA | 1 cut(s) | 54 |
| BstMAI | GTCTC | 1 cut(s) | 128 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 271 |
| BsuRI | GGCC | 1 cut(s) | 44 |
| BtgZI | GCGATG | 1 cut(s) | 159 |
| BtsIMutI | CAGTG | 1 cut(s) | 113 |
| Csp6I | GTAC | 2 cut(s) | 55, 162 |
| CviJI | RGCY | 2 cut(s) | 44, 277 |
| CviKI_1 | RGCY | 2 cut(s) | 44, 277 |
| CviQI | GTAC | 2 cut(s) | 55, 162 |
| Eco31I | GGTCTC | 1 cut(s) | 128 |
| Eco57I | CTGAAG | 1 cut(s) | 201 |
| Eco88I | CYCGRG | 2 cut(s) | 29, 202 |
| FaiI | YATR | 2 cut(s) | 68, 284 |
| Fnu4HI | GCNGC | 1 cut(s) | 275 |
| Fsp4HI | GCNGC | 1 cut(s) | 275 |
| GluI | GCNGC | 1 cut(s) | 275 |
| GsuI | CTGGAG | 1 cut(s) | 124 |
| HaeIII | GGCC | 1 cut(s) | 44 |
| HinfI | GANTC | 2 cut(s) | 61, 200 |
| HphI | GGTGA | 4 cut(s) | 84, 96, 111, 120 |
| Hpy166II | GTNNAC | 1 cut(s) | 55 |
| Hpy188III | TCNNGA | 2 cut(s) | 204, 217 |
| Hpy8I | GTNNAC | 1 cut(s) | 55 |
| HpyAV | CCTTC | 2 cut(s) | 34, 176 |
| HpyCH4III | ACNGT | 1 cut(s) | 117 |
| HpyCH4V | TGCA | 1 cut(s) | 274 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 271 |
| LmnI | GCTCC | 1 cut(s) | 255 |
| LpnPI | CCDG | 4 cut(s) | 144, 154, 192, 245 |
| MaeIII | GTNAC | 3 cut(s) | 62, 102, 117 |
| MlyI | GAGTC | 2 cut(s) | 70, 194 |
| MmeI | TCCRAC | 1 cut(s) | 267 |
| MnlI | CCTC | 4 cut(s) | 117, 132, 142, 148 |
| MslI | CAYNNNNRTG | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 271 |
| NmeAIII | GCCGAG | 1 cut(s) | 70 |
| NmuCI | GTSAC | 3 cut(s) | 62, 102, 117 |
| OliI | CACNNNNGTG | 1 cut(s) | 31 |
| PaeR7I | CTCGAG | 2 cut(s) | 29, 202 |
| PkrI | GCNGC | 1 cut(s) | 276 |
| PleI | GAGTC | 2 cut(s) | 69, 194 |
| PpsI | GAGTC | 2 cut(s) | 69, 194 |
| PspXI | VCTCGAGB | 1 cut(s) | 29 |
| RsaI | GTAC | 2 cut(s) | 56, 163 |
| RsaNI | GTAC | 2 cut(s) | 55, 162 |
| RseI | CAYNNNNRTG | 1 cut(s) | 31 |
| SatI | GCNGC | 1 cut(s) | 275 |
| SchI | GAGTC | 2 cut(s) | 70, 194 |
| SetI | ASST | 5 cut(s) | 109, 124, 140, 181, 279 |
| Sfr274I | CTCGAG | 2 cut(s) | 29, 202 |
| SlaI | CTCGAG | 2 cut(s) | 29, 202 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 31 |
| SmlI | CTYRAG | 2 cut(s) | 29, 202 |
| SmoI | CTYRAG | 2 cut(s) | 29, 202 |
| TaaI | ACNGT | 1 cut(s) | 117 |
| TaqI | TCGA | 2 cut(s) | 30, 203 |
| TatI | WGTACW | 1 cut(s) | 54 |
| TscAI | CASTG | 1 cut(s) | 120 |
| TseFI | GTSAC | 3 cut(s) | 62, 102, 117 |
| TseI | GCWGC | 1 cut(s) | 274 |
| Tsp45I | GTSAC | 3 cut(s) | 62, 102, 117 |
| TspRI | CASTG | 1 cut(s) | 120 |
| XhoI | CTCGAG | 2 cut(s) | 29, 202 |