Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008044.1

Orthogroup ID

OG0017703

Physical Location & Seq

Genomic Coordinates Forward (+)

65497 .. 70678

Gene Structure 5182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008044.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

atgaaactcccaaaagggtttgtcggtagagagccccgagtcggtggagaggtcggccaagtagtcgttgacggcggtctcgtcgtcaacgccggaggagacggggtggtgaaggacgatgacatggcggtcagggtcgatttgggtggttttgtgccaacgttctcggtcgtgggagtcatgtatcatgaggctagagaatcttgggtgggtgagcatgacggaggacttgacctgggatttgatggagtcaatgtctattgggtttttgaagccgatgatgcagtggattatttggttcatttggggctgcaggaagagacggcaggctggggtcaggccatcacaggctcatcagagttggttgttgcagttatcgccgatgaacccatactggattctctattggcagcaatgagcacgggtcccacaacccataaaccaggaacaggcctaggaagcccaaatcatggaaattgctataggcaccccacagctacttcccataactttcaggccaccggcaccgtgagtctgcgctgccactgcatgacatcctccaccgagagctcgtacaaccgccaaaaatcttccaccaccgtacctcgcgccgccgctgaaaagcttcggcgtctcaaggctttagattctattaagatagactatccacttacaaacccaacttggggggcggtgcggaggcgcacgcccggagcaagcagtatgagtatcgggccaactcgagcctggggaagaccggcggagacggacgacgagattagcaagtcgtcgaagaggaagaaggagcgtgatgctgaagctgaagccgagcctggttcacttcgccggaaacgacgtcggattaaggagcagagcgtactgaatgatgaagaggaaggtgtgtatcagcctaagacgagggagacgcaggcggcgtatgaggctttgcttggtgtgattcaggaacagttgggtggtcagccgccgagtacagtcggtggcgcggcggatgaggttttggctgtgttgaagaatgagaatttgaagaattcgaagaagaaatcggagattgagaagttgttgaatgctataccggattcggtgtttgatctttttgtgaggattggggctaggattactgattaccaagatgggagtgatgctggtggggctaatggggatgaagggcttgatgatgtgggcgtttcggttgagtttgaagagaatgaagacaatgaggagggaagtgatgttgatttggtgcaggaggatgaggaagaggaggattctgatgtggaggagagagccgggtttggggctatgcaagtgggtaaggggattgatgatgtcgaaatgcaggaagccaatgagggtgtgaggcttaatgtgcaggacattgatgcttattggcttcagaggaaggtttcggaagctttcgacaaacagatggatgcagagcagtgccagaagcttgctgaagaggttctggggatactacctcaaggtaacgatattaatgtcgaaaataagctgatgcagtaccttggtattcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000354 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009506 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0042623 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0055044 GO:0065003 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C Sec63

Protein Analysis

518

Amino Acids

56.21

Weight (kDa)

4.58

Isoelectric Point (pI)

41.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017703)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g47191
pyrus_communis	pycom12g23590
rosa_laevigata	RLG00000000403 RLG00000012895 RLG00000012897
rosa_multiflora	Rmu_co8119870.1_g000001 Rmu_sc0008044.1_g000011
rosa_samantha	Rh3BG010400 Rh3CG010100 Rh3DG010800 Rh7AG391900 Rh7CG410800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	1 cut(s)	859
AccB1I	GGYRCC	2 cut(s)	486, 524
AccB7I	CCANNNNNTGG	1 cut(s)	470
AccII	CGCG	2 cut(s)	609, 1004
AclI	AACGTT	1 cut(s)	161
AcoI	YGGCCR	1 cut(s)	55
AcsI	RAATTY	2 cut(s)	1039, 1048
AcuI	CTGAAG	4 cut(s)	837, 843, 1397, 1497
AcyI	GRCGYC	2 cut(s)	631, 856
AfaI	GTAC	5 cut(s)	575, 603, 879, 991, 1541
AfiI	CCNNNNNNNGG	6 cut(s)	41, 449, 470, 685, 686, 1314
AgsI	TTSAA	6 cut(s)	272, 1030, 1045, 1084, 1220, 1553
AjnI	CCWGG	4 cut(s)	234, 442, 746, 832
AluBI	AGCT	7 cut(s)	497, 570, 625, 821, 1433, 1471, 1531
AluI	AGCT	7 cut(s)	497, 570, 625, 821, 1433, 1471, 1531
Alw21I	GWGCWC	2 cut(s)	422, 572
Alw26I	GTCTC	6 cut(s)	83, 93, 314, 638, 758, 917
Ama87I	CYCGRG	2 cut(s)	36, 741
AoxI	GGCC	5 cut(s)	55, 339, 451, 516, 734
ApeKI	GCWGC	3 cut(s)	310, 410, 540
ApoI	RAATTY	2 cut(s)	1039, 1048
ArsI	GACNNNNNNTTYG	2 cut(s)	224, 256
AseI	ATTAAT	1 cut(s)	1515
Asp700I	GAANNNNTTC	2 cut(s)	624, 1482
AspA2I	CCTAGG	1 cut(s)	454
AspLEI	GCGC	4 cut(s)	540, 611, 705, 1004
AspS9I	GGNCC	2 cut(s)	425, 734
AsuC2I	CCSGG	2 cut(s)	711, 1309
AsuHPI	GGTGA	2 cut(s)	121, 224
AsuII	TTCGAA	1 cut(s)	1052
AvaI	CYCGRG	2 cut(s)	36, 741
AvaII	GGWCC	1 cut(s)	425
AvrII	CCTAGG	1 cut(s)	454
BaeI	ACNNNNGTAYC	2 cut(s)	585, 618
BanI	GGYRCC	2 cut(s)	486, 524
BanII	GRGCYC	2 cut(s)	36, 572
BbsI	GAAGAC	2 cut(s)	760, 1236
Bbv12I	GWGCWC	2 cut(s)	422, 572
BbvI	GCAGC	3 cut(s)	297, 422, 527
BccI	CCATC	4 cut(s)	239, 350, 1145, 1441
BceAI	ACGGC	2 cut(s)	88, 339
BciT130I	CCWGG	4 cut(s)	236, 444, 748, 834
BciVI	GTATCC	1 cut(s)	1485
BcnI	CCSGG	2 cut(s)	711, 1309
BcoDI	GTCTC	6 cut(s)	83, 93, 314, 638, 758, 917
BfaI	CTAG	3 cut(s)	195, 455, 1131
BfmI	CTRYAG	2 cut(s)	311, 481
BfuI	GTATCC	1 cut(s)	1485
BisI	GCNGC	8 cut(s)	311, 411, 541, 612, 615, 933, 983, 1005
BlnI	CCTAGG	1 cut(s)	454
BlsI	GCNGC	8 cut(s)	312, 412, 542, 613, 616, 934, 984, 1006
Bme1390I	CCNGG	6 cut(s)	236, 444, 711, 748, 834, 1309
Bme18I	GGWCC	1 cut(s)	425
BmeT110I	CYCGRG	2 cut(s)	36, 741
BmgT120I	GGNCC	2 cut(s)	425, 734
BmiI	GGNNCC	4 cut(s)	426, 427, 488, 526
BmrFI	CCNGG	6 cut(s)	236, 444, 711, 748, 834, 1309
BmsI	GCATC	6 cut(s)	271, 802, 1150, 1390, 1441, 1524
BoxI	GACNNNNGTC	1 cut(s)	75
BpiI	GAAGAC	2 cut(s)	760, 1236
Bpu14I	TTCGAA	1 cut(s)	1052
BpuEI	CTTGAG	2 cut(s)	620, 1485
BpuMI	CCSGG	2 cut(s)	711, 1309
BsaHI	GRCGYC	2 cut(s)	631, 856
BsaI	GGTCTC	1 cut(s)	83
BsaJI	CCNNGG	4 cut(s)	235, 454, 747, 1543
BsaWI	WCCGGW	1 cut(s)	1093
BsaXI	ACNNNNNCTCC	4 cut(s)	90, 120, 240, 270
Bsc4I	CCNNNNNNNGG	6 cut(s)	41, 449, 470, 685, 686, 1314
Bse118I	RCCGGY	2 cut(s)	521, 757
Bse1I	ACTGG	1 cut(s)	399
Bse3DI	GCAATG	1 cut(s)	420
BseBI	CCWGG	4 cut(s)	236, 444, 748, 834
BseDI	CCNNGG	4 cut(s)	235, 454, 747, 1543
BseGI	GGATG	5 cut(s)	554, 1015, 1186, 1276, 1456
BseLI	CCNNNNNNNGG	6 cut(s)	41, 449, 470, 685, 686, 1314
BseMI	GCAATG	1 cut(s)	420
BseNI	ACTGG	1 cut(s)	399
BseRI	GAGGAG	4 cut(s)	111, 1253, 1295, 1313
BseXI	GCAGC	3 cut(s)	297, 422, 527
BseYI	CCCAGC	1 cut(s)	330
BsgI	GTGCAG	2 cut(s)	1283, 1409
Bsh1236I	CGCG	2 cut(s)	609, 1004
Bsh1285I	CGRYCG	1 cut(s)	171
BshFI	GGCC	5 cut(s)	57, 341, 453, 518, 736
BshNI	GGYRCC	2 cut(s)	486, 524
BsiEI	CGRYCG	1 cut(s)	171
BsiHKAI	GWGCWC	2 cut(s)	422, 572
BsiHKCI	CYCGRG	2 cut(s)	36, 741
BsiSI	CCGG	7 cut(s)	93, 522, 711, 758, 847, 1094, 1308
BslFI	GGGAC	1 cut(s)	411
BslI	CCNNNNNNNGG	6 cut(s)	41, 449, 470, 685, 686, 1314
BsmAI	GTCTC	6 cut(s)	83, 93, 314, 638, 758, 917
BsmBI	CGTCTC	5 cut(s)	93, 314, 638, 758, 917
BsmFI	GGGAC	1 cut(s)	411
BsmI	GAATGC	1 cut(s)	1090
BsnI	GGCC	5 cut(s)	57, 341, 453, 518, 736
Bso31I	GGTCTC	1 cut(s)	83
BsoBI	CYCGRG	2 cut(s)	36, 741
Bsp119I	TTCGAA	1 cut(s)	1052
Bsp1286I	GDGCHC	3 cut(s)	36, 422, 572
Bsp143I	GATC	1 cut(s)	1108
BspANI	GGCC	5 cut(s)	57, 341, 453, 518, 736
BspFNI	CGCG	2 cut(s)	609, 1004
BspHI	TCATGA	1 cut(s)	187
BspLI	GGNNCC	4 cut(s)	426, 427, 488, 526
BspMAI	CTGCAG	1 cut(s)	315
BspT104I	TTCGAA	1 cut(s)	1052
BspT107I	GGYRCC	2 cut(s)	486, 524
BspTNI	GGTCTC	1 cut(s)	83
BsrDI	GCAATG	1 cut(s)	420
BsrFI	RCCGGY	2 cut(s)	521, 757
BsrI	ACTGG	1 cut(s)	399
BssAI	RCCGGY	2 cut(s)	521, 757
BssECI	CCNNGG	4 cut(s)	235, 454, 747, 1543
BssMI	GATC	1 cut(s)	1108
BssNI	GRCGYC	2 cut(s)	631, 856
BssT1I	CCWWGG	2 cut(s)	454, 1543
Bst2UI	CCWGG	4 cut(s)	236, 444, 748, 834
Bst4CI	ACNGT	4 cut(s)	529, 601, 969, 994
Bst6I	CTCTTC	6 cut(s)	312, 788, 885, 1215, 1272, 1473
BstACI	GRCGYC	2 cut(s)	631, 856
BstBI	TTCGAA	1 cut(s)	1052
BstC8I	GCNNGC	5 cut(s)	328, 707, 718, 930, 1473
BstDEI	CTNAG	1 cut(s)	912
BstF5I	GGATG	5 cut(s)	554, 1015, 1186, 1276, 1456
BstFNI	CGCG	2 cut(s)	609, 1004
BstHHI	GCGC	4 cut(s)	540, 611, 705, 1004
BstKTI	GATC	1 cut(s)	1111
BstMAI	GTCTC	6 cut(s)	83, 93, 314, 638, 758, 917
BstMBI	GATC	1 cut(s)	1108
BstMCI	CGRYCG	1 cut(s)	171
BstMWI	GCNNNNNNNGC	7 cut(s)	281, 377, 459, 546, 941, 1169, 1387
BstNI	CCWGG	4 cut(s)	236, 444, 748, 834
BstPAI	GACNNNNGTC	1 cut(s)	75
BstSCI	CCNGG	6 cut(s)	234, 442, 709, 746, 832, 1307
BstSFI	CTRYAG	2 cut(s)	311, 481
BstUI	CGCG	2 cut(s)	609, 1004
BstV1I	GCAGC	3 cut(s)	297, 422, 527
BstV2I	GAAGAC	2 cut(s)	760, 1236
BsuI	GTATCC	1 cut(s)	1485
BsuRI	GGCC	5 cut(s)	57, 341, 453, 518, 736
BtsCI	GGATG	5 cut(s)	554, 1015, 1186, 1276, 1456
BtsI	GCAGTG	3 cut(s)	291, 544, 1466
BtsIMutI	CAGTG	3 cut(s)	291, 544, 1466
Cac8I	GCNNGC	5 cut(s)	328, 707, 718, 930, 1473
CciI	TCATGA	1 cut(s)	187
CfoI	GCGC	4 cut(s)	540, 611, 705, 1004
Cfr10I	RCCGGY	2 cut(s)	521, 757
Cfr13I	GGNCC	2 cut(s)	425, 734
CseI	GACGC	2 cut(s)	620, 934
Csp6I	GTAC	5 cut(s)	574, 602, 878, 990, 1540
CviAII	CATG	6 cut(s)	124, 181, 188, 218, 470, 550
CviQI	GTAC	5 cut(s)	574, 602, 878, 990, 1540
DdeI	CTNAG	1 cut(s)	912
DpnI	GATC	1 cut(s)	1110
DpnII	GATC	1 cut(s)	1108
DrdI	GACNNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	1 cut(s)	55
Eam1104I	CTCTTC	6 cut(s)	312, 788, 885, 1215, 1272, 1473
EarI	CTCTTC	6 cut(s)	312, 788, 885, 1215, 1272, 1473
EciI	GGCGGA	2 cut(s)	776, 1022
Ecl136II	GAGCTC	1 cut(s)	570
Eco130I	CCWWGG	2 cut(s)	454, 1543
Eco147I	AGGCCT	1 cut(s)	453
Eco24I	GRGCYC	2 cut(s)	36, 572
Eco31I	GGTCTC	1 cut(s)	83
Eco47I	GGWCC	1 cut(s)	425
Eco53kI	GAGCTC	1 cut(s)	570
Eco57I	CTGAAG	4 cut(s)	837, 843, 1397, 1497
Eco88I	CYCGRG	2 cut(s)	36, 741
EcoICRI	GAGCTC	1 cut(s)	570
EcoO109I	RGGNCCY	1 cut(s)	425
EcoRI	GAATTC	1 cut(s)	1048
EcoRII	CCWGG	4 cut(s)	234, 442, 746, 832
EcoT14I	CCWWGG	2 cut(s)	454, 1543
EcoT38I	GRGCYC	2 cut(s)	36, 572
ErhI	CCWWGG	2 cut(s)	454, 1543
Esp3I	CGTCTC	5 cut(s)	93, 314, 638, 758, 917
FaeI	CATG	6 cut(s)	127, 184, 191, 221, 473, 553
FaqI	GGGAC	1 cut(s)	411
FatI	CATG	6 cut(s)	123, 180, 187, 217, 469, 549
Fnu4HI	GCNGC	8 cut(s)	311, 411, 541, 612, 615, 933, 983, 1005
FokI	GGATG	5 cut(s)	541, 1022, 1193, 1283, 1463
FriOI	GRGCYC	2 cut(s)	36, 572
Fsp4HI	GCNGC	8 cut(s)	311, 411, 541, 612, 615, 933, 983, 1005
FspBI	CTAG	3 cut(s)	195, 455, 1131
GlaI	GCGC	4 cut(s)	539, 610, 704, 1003
GluI	GCNGC	8 cut(s)	311, 411, 541, 612, 615, 933, 983, 1005
GsaI	CCCAGC	1 cut(s)	334
HaeIII	GGCC	5 cut(s)	57, 341, 453, 518, 736
HapII	CCGG	7 cut(s)	93, 522, 711, 758, 847, 1094, 1308
HgaI	GACGC	2 cut(s)	620, 934
HhaI	GCGC	4 cut(s)	540, 611, 705, 1004
Hin1I	GRCGYC	2 cut(s)	631, 856
Hin1II	CATG	6 cut(s)	127, 184, 191, 221, 473, 553
Hin6I	GCGC	4 cut(s)	538, 609, 703, 1002
HinP1I	GCGC	4 cut(s)	538, 609, 703, 1002
HincII	GTYRAC	2 cut(s)	70, 88
HindII	GTYRAC	2 cut(s)	70, 88
HindIII	AAGCTT	3 cut(s)	623, 1431, 1469
HpaII	CCGG	7 cut(s)	93, 522, 711, 758, 847, 1094, 1308
HphI	GGTGA	2 cut(s)	121, 224
Hpy166II	GTNNAC	3 cut(s)	70, 88, 839
Hpy188I	TCNGA	6 cut(s)	358, 861, 1066, 1291, 1416, 1429
Hpy188III	TCNNGA	2 cut(s)	188, 962
Hpy8I	GTNNAC	3 cut(s)	70, 88, 839
Hpy99I	CGWCG	5 cut(s)	86, 776, 793, 858, 861
HpyAV	CCTTC	5 cut(s)	106, 796, 890, 1178, 1414
HpyCH4III	ACNGT	4 cut(s)	529, 601, 969, 994
HpyCH4IV	ACGT	2 cut(s)	161, 856
HpyF10VI	GCNNNNNNNGC	7 cut(s)	281, 377, 459, 546, 941, 1169, 1387
HpyF3I	CTNAG	1 cut(s)	912
HpySE526I	ACGT	2 cut(s)	161, 856
Hsp92I	GRCGYC	2 cut(s)	631, 856
Hsp92II	CATG	6 cut(s)	127, 184, 191, 221, 473, 553
HspAI	GCGC	4 cut(s)	538, 609, 703, 1002
KflI	GGGWCCC	1 cut(s)	425
Kzo9I	GATC	1 cut(s)	1108
LmnI	GCTCC	3 cut(s)	713, 805, 868
Lsp1109I	GCAGC	3 cut(s)	297, 422, 527
LweI	GCATC	6 cut(s)	271, 802, 1150, 1390, 1441, 1524
MaeI	CTAG	3 cut(s)	195, 455, 1131
MaeII	ACGT	2 cut(s)	161, 856
MaeIII	GTNAC	1 cut(s)	1505
MalI	GATC	1 cut(s)	1110
MboI	GATC	1 cut(s)	1108
MhlI	GDGCHC	3 cut(s)	36, 422, 572
MluCI	AATT	3 cut(s)	475, 1039, 1048
MlyI	GAGTC	4 cut(s)	48, 186, 258, 541
MmeI	TCCRAC	1 cut(s)	839
MroXI	GAANNNNTTC	2 cut(s)	624, 1482
MseI	TTAA	4 cut(s)	654, 864, 1383, 1515
MspA1I	CMGCKG	1 cut(s)	617
MspI	CCGG	7 cut(s)	93, 522, 711, 758, 847, 1094, 1308
MspR9I	CCNGG	6 cut(s)	236, 444, 711, 748, 834, 1309
Mva1269I	GAATGC	1 cut(s)	1090
MvaI	CCWGG	4 cut(s)	236, 444, 748, 834
MvnI	CGCG	2 cut(s)	609, 1004
MwoI	GCNNNNNNNGC	7 cut(s)	281, 377, 459, 546, 941, 1169, 1387
NciI	CCSGG	2 cut(s)	711, 1309
NdeII	GATC	1 cut(s)	1108
NlaIII	CATG	6 cut(s)	127, 184, 191, 221, 473, 553
NlaIV	GGNNCC	4 cut(s)	426, 427, 488, 526
NmeAIII	GCCGAG	2 cut(s)	853, 1011
NspV	TTCGAA	1 cut(s)	1052
PaeR7I	CTCGAG	1 cut(s)	741
PagI	TCATGA	1 cut(s)	187
PceI	AGGCCT	1 cut(s)	453
PcsI	WCGNNNNNNNCGW	3 cut(s)	78, 850, 932
PctI	GAATGC	1 cut(s)	1090
PdmI	GAANNNNTTC	2 cut(s)	624, 1482
PfeI	GAWTC	6 cut(s)	200, 398, 647, 958, 1097, 1286
PflMI	CCANNNNNTGG	1 cut(s)	470
PkrI	GCNGC	8 cut(s)	312, 412, 542, 613, 616, 934, 984, 1006
PleI	GAGTC	4 cut(s)	47, 185, 257, 540
PpsI	GAGTC	4 cut(s)	47, 185, 257, 540
PpuMI	RGGWCCY	1 cut(s)	425
PshAI	GACNNNNGTC	1 cut(s)	75
PshBI	ATTAAT	1 cut(s)	1515
Psp124BI	GAGCTC	1 cut(s)	572
Psp1406I	AACGTT	1 cut(s)	161
Psp5II	RGGWCCY	1 cut(s)	425
Psp6I	CCWGG	4 cut(s)	234, 442, 746, 832
PspFI	CCCAGC	1 cut(s)	330
PspGI	CCWGG	4 cut(s)	234, 442, 746, 832
PspN4I	GGNNCC	4 cut(s)	426, 427, 488, 526
PspPI	GGNCC	2 cut(s)	425, 734
PspPPI	RGGWCCY	1 cut(s)	425
PspXI	VCTCGAGB	1 cut(s)	741
PstI	CTGCAG	1 cut(s)	315
RsaI	GTAC	5 cut(s)	575, 603, 879, 991, 1541
RsaNI	GTAC	5 cut(s)	574, 602, 878, 990, 1540
SacI	GAGCTC	1 cut(s)	572
SaqAI	TTAA	4 cut(s)	654, 864, 1383, 1515
SatI	GCNGC	8 cut(s)	311, 411, 541, 612, 615, 933, 983, 1005
Sau3AI	GATC	1 cut(s)	1108
Sau96I	GGNCC	2 cut(s)	425, 734
SchI	GAGTC	4 cut(s)	48, 186, 258, 541
ScrFI	CCNGG	6 cut(s)	236, 444, 711, 748, 834, 1309
SduI	GDGCHC	3 cut(s)	36, 422, 572
SfaNI	GCATC	6 cut(s)	271, 802, 1150, 1390, 1441, 1524
SfcI	CTRYAG	2 cut(s)	311, 481
Sfr274I	CTCGAG	1 cut(s)	741
SfuI	TTCGAA	1 cut(s)	1052
SinI	GGWCC	1 cut(s)	425
SlaI	CTCGAG	1 cut(s)	741
SmlI	CTYRAG	3 cut(s)	635, 741, 1500
SmoI	CTYRAG	3 cut(s)	635, 741, 1500
Sse9I	AATT	3 cut(s)	475, 1039, 1048
SseBI	AGGCCT	1 cut(s)	453
SspMI	CTAG	3 cut(s)	195, 455, 1131
SstI	GAGCTC	1 cut(s)	572
StuI	AGGCCT	1 cut(s)	453
StyD4I	CCNGG	6 cut(s)	234, 442, 709, 746, 832, 1307
StyI	CCWWGG	2 cut(s)	454, 1543
TaaI	ACNGT	4 cut(s)	529, 601, 969, 994
TaiI	ACGT	2 cut(s)	164, 859
TaqI	TCGA	7 cut(s)	138, 742, 791, 1052, 1350, 1437, 1521
TaqII	GACCGA	1 cut(s)	157
TasI	AATT	3 cut(s)	475, 1039, 1048
TatI	WGTACW	1 cut(s)	989
TauI	GCSGC	5 cut(s)	614, 617, 935, 985, 1007
TfiI	GAWTC	6 cut(s)	200, 398, 647, 958, 1097, 1286
Tru1I	TTAA	4 cut(s)	654, 864, 1383, 1515
Tru9I	TTAA	4 cut(s)	654, 864, 1383, 1515
TscAI	CASTG	3 cut(s)	291, 551, 1466
TseI	GCWGC	3 cut(s)	310, 410, 540
TspDTI	ATGAA	6 cut(s)	17, 290, 399, 903, 1197, 1242
TspGWI	ACGGA	2 cut(s)	237, 782
TspRI	CASTG	3 cut(s)	291, 551, 1466
Van91I	CCANNNNNTGG	1 cut(s)	470
VpaK11BI	GGWCC	1 cut(s)	425
VspI	ATTAAT	1 cut(s)	1515
XapI	RAATTY	2 cut(s)	1039, 1048
XcmI	CCANNNNNNNNNTGG	1 cut(s)	744
XhoI	CTCGAG	1 cut(s)	741
XmaJI	CCTAGG	1 cut(s)	454
XmnI	GAANNNNTTC	2 cut(s)	624, 1482
XspI	CTAG	3 cut(s)	195, 455, 1131
ZraI	GACGTC	1 cut(s)	857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.