PAS fold
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0411111 |
| rosa_laevigata | RLG00000023310 |
| rosa_multiflora | Rmu_sc0008540.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00109050 Rroxscaffold_2G00109120 |
| rosa_samantha | Rh2CG341000 Rh7AG504900 Rh7BG361000 Rh7BG476700 |
| rosa_wichuraiana | Rw2G014720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 168 |
| AciI | CCGC | 1 cut(s) | 166 |
| AclWI | GGATC | 3 cut(s) | 57, 92, 212 |
| AfaI | GTAC | 1 cut(s) | 161 |
| AgsI | TTSAA | 2 cut(s) | 11, 203 |
| AluBI | AGCT | 2 cut(s) | 141, 151 |
| AluI | AGCT | 2 cut(s) | 141, 151 |
| Alw26I | GTCTC | 1 cut(s) | 206 |
| AlwI | GGATC | 3 cut(s) | 57, 92, 212 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 227 |
| ApeKI | GCWGC | 1 cut(s) | 106 |
| AspS9I | GGNCC | 1 cut(s) | 206 |
| AvaII | GGWCC | 1 cut(s) | 206 |
| BbvI | GCAGC | 1 cut(s) | 93 |
| BcoDI | GTCTC | 1 cut(s) | 206 |
| BisI | GCNGC | 2 cut(s) | 107, 166 |
| BlsI | GCNGC | 2 cut(s) | 108, 167 |
| Bme18I | GGWCC | 1 cut(s) | 206 |
| BmgT120I | GGNCC | 1 cut(s) | 206 |
| BmsI | GCATC | 1 cut(s) | 140 |
| BsaJI | CCNNGG | 1 cut(s) | 101 |
| BseDI | CCNNGG | 1 cut(s) | 101 |
| BseGI | GGATG | 1 cut(s) | 131 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BseXI | GCAGC | 1 cut(s) | 93 |
| Bsh1236I | CGCG | 1 cut(s) | 168 |
| BsmAI | GTCTC | 1 cut(s) | 206 |
| Bsp143I | GATC | 3 cut(s) | 49, 97, 217 |
| BspACI | CCGC | 1 cut(s) | 166 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspFNI | CGCG | 1 cut(s) | 168 |
| BspPI | GGATC | 3 cut(s) | 57, 92, 212 |
| BssECI | CCNNGG | 1 cut(s) | 101 |
| BssMI | GATC | 3 cut(s) | 49, 97, 217 |
| BssT1I | CCWWGG | 1 cut(s) | 101 |
| Bst4CI | ACNGT | 1 cut(s) | 229 |
| BstDEI | CTNAG | 2 cut(s) | 145, 210 |
| BstF5I | GGATG | 1 cut(s) | 131 |
| BstFNI | CGCG | 1 cut(s) | 168 |
| BstKTI | GATC | 3 cut(s) | 52, 100, 220 |
| BstMAI | GTCTC | 1 cut(s) | 206 |
| BstMBI | GATC | 3 cut(s) | 49, 97, 217 |
| BstUI | CGCG | 1 cut(s) | 168 |
| BstV1I | GCAGC | 1 cut(s) | 93 |
| BstX2I | RGATCY | 1 cut(s) | 49 |
| BstYI | RGATCY | 1 cut(s) | 49 |
| BtsCI | GGATG | 1 cut(s) | 131 |
| CaiI | CAGNNNCTG | 1 cut(s) | 227 |
| Cfr13I | GGNCC | 1 cut(s) | 206 |
| CseI | GACGC | 1 cut(s) | 70 |
| Csp6I | GTAC | 1 cut(s) | 160 |
| CviJI | RGCY | 4 cut(s) | 106, 141, 151, 165 |
| CviKI_1 | RGCY | 4 cut(s) | 106, 141, 151, 165 |
| CviQI | GTAC | 1 cut(s) | 160 |
| DdeI | CTNAG | 2 cut(s) | 145, 210 |
| DpnI | GATC | 3 cut(s) | 51, 99, 219 |
| DpnII | GATC | 3 cut(s) | 49, 97, 217 |
| Eco130I | CCWWGG | 1 cut(s) | 101 |
| Eco47I | GGWCC | 1 cut(s) | 206 |
| EcoO109I | RGGNCCY | 1 cut(s) | 206 |
| EcoT14I | CCWWGG | 1 cut(s) | 101 |
| ErhI | CCWWGG | 1 cut(s) | 101 |
| FaiI | YATR | 4 cut(s) | 47, 74, 125, 241 |
| Fnu4HI | GCNGC | 2 cut(s) | 107, 166 |
| FokI | GGATG | 1 cut(s) | 118 |
| Fsp4HI | GCNGC | 2 cut(s) | 107, 166 |
| GluI | GCNGC | 2 cut(s) | 107, 166 |
| HgaI | GACGC | 1 cut(s) | 70 |
| HinfI | GANTC | 2 cut(s) | 4, 195 |
| Hpy188I | TCNGA | 1 cut(s) | 136 |
| Hpy188III | TCNNGA | 1 cut(s) | 8 |
| Hpy99I | CGWCG | 1 cut(s) | 64 |
| HpyAV | CCTTC | 3 cut(s) | 22, 34, 209 |
| HpyCH4III | ACNGT | 1 cut(s) | 229 |
| HpyCH4IV | ACGT | 1 cut(s) | 70 |
| HpyCH4V | TGCA | 2 cut(s) | 131, 192 |
| HpyF3I | CTNAG | 2 cut(s) | 145, 210 |
| HpySE526I | ACGT | 1 cut(s) | 70 |
| Kzo9I | GATC | 3 cut(s) | 49, 97, 217 |
| LpnPI | CCDG | 4 cut(s) | 50, 123, 222, 234 |
| Lsp1109I | GCAGC | 1 cut(s) | 93 |
| LweI | GCATC | 1 cut(s) | 140 |
| MaeII | ACGT | 1 cut(s) | 70 |
| MalI | GATC | 3 cut(s) | 51, 99, 219 |
| MboI | GATC | 3 cut(s) | 49, 97, 217 |
| MboII | GAAGA | 4 cut(s) | 23, 37, 182, 195 |
| MflI | RGATCY | 1 cut(s) | 49 |
| MluCI | AATT | 1 cut(s) | 187 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 1 cut(s) | 159 |
| MnlI | CCTC | 2 cut(s) | 15, 30 |
| MvnI | CGCG | 1 cut(s) | 168 |
| NdeII | GATC | 3 cut(s) | 49, 97, 217 |
| PfeI | GAWTC | 1 cut(s) | 195 |
| PkrI | GCNGC | 2 cut(s) | 108, 167 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| PpuMI | RGGWCCY | 1 cut(s) | 206 |
| Psp5II | RGGWCCY | 1 cut(s) | 206 |
| PspPI | GGNCC | 1 cut(s) | 206 |
| PspPPI | RGGWCCY | 1 cut(s) | 206 |
| PstNI | CAGNNNCTG | 1 cut(s) | 227 |
| PsuI | RGATCY | 1 cut(s) | 49 |
| RsaI | GTAC | 1 cut(s) | 161 |
| RsaNI | GTAC | 1 cut(s) | 160 |
| SatI | GCNGC | 2 cut(s) | 107, 166 |
| Sau3AI | GATC | 3 cut(s) | 49, 97, 217 |
| Sau96I | GGNCC | 1 cut(s) | 206 |
| SchI | GAGTC | 1 cut(s) | 13 |
| SetI | ASST | 4 cut(s) | 73, 143, 153, 211 |
| SfaNI | GCATC | 1 cut(s) | 140 |
| SinI | GGWCC | 1 cut(s) | 206 |
| Sse9I | AATT | 1 cut(s) | 187 |
| SsiI | CCGC | 1 cut(s) | 166 |
| SspI | AATATT | 1 cut(s) | 177 |
| StyI | CCWWGG | 1 cut(s) | 101 |
| TaaI | ACNGT | 1 cut(s) | 229 |
| TaiI | ACGT | 1 cut(s) | 73 |
| TasI | AATT | 1 cut(s) | 187 |
| TatI | WGTACW | 1 cut(s) | 159 |
| TauI | GCSGC | 1 cut(s) | 168 |
| TfiI | GAWTC | 1 cut(s) | 195 |
| TseI | GCWGC | 1 cut(s) | 106 |
| TspGWI | ACGGA | 1 cut(s) | 170 |
| VpaK11BI | GGWCC | 1 cut(s) | 206 |