Rmu_sc0010190.1_g000023

Protein of unknown function (DUF1666)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010190.1
Physical Location & Seq
Forward (+)
93947 .. 96511
2565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010190.1_g000023.1.cds

Sequence Viewer

Length: 1761 bp
atgccatgttcaacagaggaagcacttgctaggctcttctacaatacttcatcctccgtctacctcctccttctcttcctctatgtctcgtccattgttcttgccaagttcttctacttcgttggcagcaacccaatattcccaagaaaccagaatggatacgagaattatctgttttcggatgaagaagaggaggaagaagaagaattagaagaaaggcacagctttcatgttcatggtcatcagtactacactgaaaacgatcatctggtggccgacatcattcatggaggtgaagcactaaagtttttgcctaatgacaaccttcagaaggatcgatcaagtttttctgatcaagagttcattagcgccggggggagcctaattgaagaagaccaaaatgatatgtcacaaggttcagaatcagaacaagatcatattgcagaggaaatccctgtcagagatactgcttctgtttgcaattctgtcccgaatgatcaagtctggaccacttctccgatcactatagaactacacagaagtgagttgaggagaaatgacaaaagatgtgacgatcataatcatgaggattctgatcagattaccgaaaacaatacagagacaaaattatctggggatgaaaattttctagtatttaggccgccccagtcggagaccaagaaattaatcaaggttcaagaaaacaaggaggatgaaatttttggtgactcgacagttggatcaacttctaagagctcttctgaatggagaagctcaatcaattgttctgcgaccgaagatccattttcttcctcatcacggagaagctgccccaagtgggagtcttacactgtctttcagaaatatgatgaagaaatgatgtacctagacagaattagtgctcaaaagctccatgaaacagaatcacttaggtctattcaggtttgtccaagatcaatttcagagaggattgttcatcgaatctcattagcaaccaaacggccatctgacgtacgtcacaacccttatcatgaactagaggctgcttatgttgctcaaatttgcataacgtgggaagcacttaactggaactacaagaaattcgagcaaaaaagggcctcgtcgcatcacgattttgaccctggctgtcctggccagattgcgcagcagtttcagcagttccaagttcttttgcagagatatgtagagaatgagccctacgagcagggccggagacctgagatttacgctaggatgaggcttttggcaccgaagctacttcaagttccagaatatcgagaagatgatgatcatgaaaaggaagaaggttttggctcgagaatctcctcagctgcgtttctaatgataatggaagatggaatccgaacgttcatggaatttcttaaggctgataaagagaaaccctgccaaaagttatcagccatgtttaggagaaaacgaagaggttcagttgatccaactcttctaaatctcatgaaaaaagttaaccaaaagaagaagatgaagatcaaagaccttcgccgttcgcacaaatgcttgagaaagaaaagcttaaaggtggaggaagagatggagatactgcttggcctaattgacctaaaactggtatctagggttttgagaatgggtgacttgagtgcggagcaactacattggtgtgaagagaagatgagcaaagtgttagtcctggatggaaaataccatagagattccacaccacttttcttcccagcacagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

586

Amino Acids

68.25

Weight (kDa)

5.52

Isoelectric Point (pI)

64.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1164
AccB1I GGYRCC 1 cut(s) 1267
AccI GTMKAC 1 cut(s) 60
AciI CCGC 2 cut(s) 662, 1661
AclI AACGTT 1 cut(s) 1388
AclWI GGATC 4 cut(s) 342, 748, 794, 1469
AcoI YGGCCR 3 cut(s) 273, 1001, 1153
AcsI RAATTY 5 cut(s) 643, 717, 1059, 1100, 1397
AcuI CTGAAG 1 cut(s) 311
AfaI GTAC 3 cut(s) 248, 884, 1014
AfiI CCNNNNNNNGG 5 cut(s) 331, 819, 838, 1449, 1624
AflII CTTAAG 1 cut(s) 1403
AgsI TTSAA 4 cut(s) 12, 389, 698, 1283
AjnI CCWGG 3 cut(s) 1141, 1150, 1707
AjuI GAANNNNNNNTTGG 4 cut(s) 943, 975, 1314, 1346
AleI CACNNNNGTG 1 cut(s) 540
AluBI AGCT 8 cut(s) 225, 756, 774, 828, 910, 1276, 1352, 1572
AluI AGCT 8 cut(s) 225, 756, 774, 828, 910, 1276, 1352, 1572
Alw21I GWGCWC 2 cut(s) 758, 904
Alw26I GTCTC 4 cut(s) 91, 614, 668, 1228
AlwI GGATC 4 cut(s) 342, 748, 794, 1469
Ama87I CYCGRG 1 cut(s) 1336
AoxI GGCC 7 cut(s) 273, 659, 1001, 1116, 1153, 1228, 1606
ApeKI GCWGC 5 cut(s) 126, 828, 1043, 1165, 1352
ApoI RAATTY 5 cut(s) 643, 717, 1059, 1100, 1397
ArsI GACNNNNNNTTYG 2 cut(s) 1689, 1721
AseI ATTAAT 1 cut(s) 686
Asp700I GAANNNNTTC 2 cut(s) 645, 1465
AspLEI GCGC 2 cut(s) 371, 1165
AspS9I GGNCC 3 cut(s) 507, 1116, 1228
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 3 cut(s) 305, 737, 1661
AvaI CYCGRG 1 cut(s) 1336
AvaII GGWCC 1 cut(s) 507
BalI TGGCCA 1 cut(s) 1155
BanI GGYRCC 1 cut(s) 1267
BanII GRGCYC 2 cut(s) 758, 1218
BbsI GAAGAC 1 cut(s) 399
Bbv12I GWGCWC 2 cut(s) 758, 904
BbvCI CCTCAGC 1 cut(s) 1348
BbvI GCAGC 5 cut(s) 138, 815, 1030, 1177, 1339
BccI CCATC 4 cut(s) 1012, 1370, 1585, 1706
BceAI ACGGC 2 cut(s) 1016, 1527
BciT130I CCWGG 3 cut(s) 1143, 1152, 1709
BciVI GTATCC 1 cut(s) 152
BclI TGATCA 4 cut(s) 352, 496, 595, 1309
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 4 cut(s) 91, 614, 668, 1228
BfaI CTAG 6 cut(s) 30, 650, 887, 1037, 1251, 1632
BfmI CTRYAG 1 cut(s) 525
BfoI RGCGCY 1 cut(s) 372
BfrI CTTAAG 1 cut(s) 1403
BfuI GTATCC 1 cut(s) 152
BisI GCNGC 6 cut(s) 127, 662, 829, 1044, 1166, 1353
BlsI GCNGC 6 cut(s) 128, 663, 830, 1045, 1167, 1354
BmcAI AGTACT 1 cut(s) 248
Bme1390I CCNGG 4 cut(s) 373, 1143, 1152, 1709
Bme18I GGWCC 1 cut(s) 507
BmeT110I CYCGRG 1 cut(s) 1336
BmgT120I GGNCC 3 cut(s) 507, 1116, 1228
BmiI GGNNCC 2 cut(s) 380, 1269
BmrFI CCNGG 4 cut(s) 373, 1143, 1152, 1709
BmrI ACTGGG 1 cut(s) 661
BmsI GCATC 1 cut(s) 1135
BmuI ACTGGG 1 cut(s) 661
BoxI GACNNNNGTC 1 cut(s) 1014
BpiI GAAGAC 1 cut(s) 399
Bpu10I CCTNAGC 1 cut(s) 1348
BpuEI CTTGAG 2 cut(s) 1579, 1675
BpuMI CCSGG 1 cut(s) 373
Bsa29I ATCGAT 1 cut(s) 337
BsaBI GATNNNNATC 4 cut(s) 579, 594, 1308, 1526
BsaI GGTCTC 2 cut(s) 668, 1228
BsaJI CCNNGG 2 cut(s) 372, 1141
BsaXI ACNNNNNCTCC 2 cut(s) 499, 529
Bsc4I CCNNNNNNNGG 5 cut(s) 331, 819, 838, 1449, 1624
Bse1I ACTGG 3 cut(s) 667, 1091, 1629
Bse8I GATNNNNATC 4 cut(s) 579, 594, 1308, 1526
BseBI CCWGG 3 cut(s) 1143, 1152, 1709
BseCI ATCGAT 1 cut(s) 337
BseDI CCNNGG 2 cut(s) 372, 1141
BseGI GGATG 6 cut(s) 50, 187, 643, 718, 1260, 1717
BseJI GATNNNNATC 4 cut(s) 579, 594, 1308, 1526
BseLI CCNNNNNNNGG 5 cut(s) 331, 819, 838, 1449, 1624
BseMII CTCAG 2 cut(s) 1230, 1362
BseNI ACTGG 3 cut(s) 667, 1091, 1629
BseRI GAGGAG 4 cut(s) 56, 206, 565, 1336
BseXI GCAGC 5 cut(s) 138, 815, 1030, 1177, 1339
BseYI CCCAGC 1 cut(s) 1750
Bsh1285I CGRYCG 1 cut(s) 795
BshFI GGCC 7 cut(s) 275, 661, 1003, 1118, 1155, 1230, 1608
BshNI GGYRCC 1 cut(s) 1267
BshVI ATCGAT 1 cut(s) 337
BsiEI CGRYCG 1 cut(s) 795
BsiHKAI GWGCWC 2 cut(s) 758, 904
BsiHKCI CYCGRG 1 cut(s) 1336
BsiSI CCGG 2 cut(s) 372, 1231
BsiWI CGTACG 1 cut(s) 1012
BslFI GGGAC 1 cut(s) 473
BslI CCNNNNNNNGG 5 cut(s) 331, 819, 838, 1449, 1624
BsmAI GTCTC 4 cut(s) 91, 614, 668, 1228
BsmFI GGGAC 1 cut(s) 473
BsnI GGCC 7 cut(s) 275, 661, 1003, 1118, 1155, 1230, 1608
Bso31I GGTCTC 2 cut(s) 668, 1228
BsoBI CYCGRG 1 cut(s) 1336
Bsp1286I GDGCHC 3 cut(s) 758, 904, 1218
BspACI CCGC 2 cut(s) 662, 1661
BspANI GGCC 7 cut(s) 275, 661, 1003, 1118, 1155, 1230, 1608
BspCNI CTCAG 2 cut(s) 1231, 1361
BspDI ATCGAT 1 cut(s) 337
BspHI TCATGA 4 cut(s) 583, 1030, 1312, 1494
BspLI GGNNCC 2 cut(s) 380, 1269
BspPI GGATC 4 cut(s) 342, 748, 794, 1469
BspQI GCTCTTC 2 cut(s) 41, 763
BspT107I GGYRCC 1 cut(s) 1267
BspTI CTTAAG 1 cut(s) 1403
BspTNI GGTCTC 2 cut(s) 668, 1228
BsrI ACTGG 3 cut(s) 667, 1091, 1629
BssECI CCNNGG 2 cut(s) 372, 1141
Bst2UI CCWGG 3 cut(s) 1143, 1152, 1709
Bst4CI ACNGT 3 cut(s) 736, 853, 1758
Bst6I CTCTTC 8 cut(s) 41, 80, 183, 763, 1456, 1488, 1581, 1677
BstAFI CTTAAG 1 cut(s) 1403
BstDEI CTNAG 4 cut(s) 750, 929, 1239, 1348
BstENI CCTNNNNNAGG 1 cut(s) 329
BstF5I GGATG 6 cut(s) 50, 187, 643, 718, 1260, 1717
BstH2I RGCGCY 1 cut(s) 372
BstHHI GCGC 2 cut(s) 371, 1165
BstMAI GTCTC 4 cut(s) 91, 614, 668, 1228
BstMCI CGRYCG 1 cut(s) 795
BstMWI GCNNNNNNNGC 4 cut(s) 1052, 1152, 1174, 1222
BstNI CCWGG 3 cut(s) 1143, 1152, 1709
BstPAI GACNNNNGTC 1 cut(s) 1014
BstSCI CCNGG 4 cut(s) 371, 1141, 1150, 1707
BstSFI CTRYAG 1 cut(s) 525
BstV1I GCAGC 5 cut(s) 138, 815, 1030, 1177, 1339
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 1 cut(s) 799
BstYI RGATCY 1 cut(s) 799
Bsu15I ATCGAT 1 cut(s) 337
BsuI GTATCC 1 cut(s) 152
BsuRI GGCC 7 cut(s) 275, 661, 1003, 1118, 1155, 1230, 1608
BsuTUI ATCGAT 1 cut(s) 337
BtsCI GGATG 6 cut(s) 50, 187, 643, 718, 1260, 1717
BtsIMutI CAGTG 2 cut(s) 252, 849
CciI TCATGA 4 cut(s) 583, 1030, 1312, 1494
CfoI GCGC 2 cut(s) 371, 1165
Cfr13I GGNCC 3 cut(s) 507, 1116, 1228
ClaI ATCGAT 1 cut(s) 337
Csp6I GTAC 3 cut(s) 247, 883, 1013
CviQI GTAC 3 cut(s) 247, 883, 1013
DdeI CTNAG 4 cut(s) 750, 929, 1239, 1348
EaeI YGGCCR 3 cut(s) 273, 1001, 1153
Eam1104I CTCTTC 8 cut(s) 41, 80, 183, 763, 1456, 1488, 1581, 1677
EarI CTCTTC 8 cut(s) 41, 80, 183, 763, 1456, 1488, 1581, 1677
Ecl136II GAGCTC 1 cut(s) 756
Eco24I GRGCYC 2 cut(s) 758, 1218
Eco31I GGTCTC 2 cut(s) 668, 1228
Eco47I GGWCC 1 cut(s) 507
Eco53kI GAGCTC 1 cut(s) 756
Eco57I CTGAAG 1 cut(s) 311
Eco88I CYCGRG 1 cut(s) 1336
EcoICRI GAGCTC 1 cut(s) 756
EcoNI CCTNNNNNAGG 1 cut(s) 329
EcoO109I RGGNCCY 1 cut(s) 1116
EcoRII CCWGG 3 cut(s) 1141, 1150, 1707
EcoT38I GRGCYC 2 cut(s) 758, 1218
FalI AAGNNNNNCTT 2 cut(s) 1556, 1588
FaqI GGGAC 1 cut(s) 473
FbaI TGATCA 4 cut(s) 352, 496, 595, 1309
FblI GTMKAC 1 cut(s) 60
Fnu4HI GCNGC 6 cut(s) 127, 662, 829, 1044, 1166, 1353
FokI GGATG 6 cut(s) 37, 194, 650, 725, 1267, 1724
FriOI GRGCYC 2 cut(s) 758, 1218
Fsp4HI GCNGC 6 cut(s) 127, 662, 829, 1044, 1166, 1353
FspBI CTAG 6 cut(s) 30, 650, 887, 1037, 1251, 1632
FspI TGCGCA 1 cut(s) 1164
GlaI GCGC 2 cut(s) 370, 1164
GluI GCNGC 6 cut(s) 127, 662, 829, 1044, 1166, 1353
GsaI CCCAGC 1 cut(s) 1754
HaeII RGCGCY 1 cut(s) 372
HaeIII GGCC 7 cut(s) 275, 661, 1003, 1118, 1155, 1230, 1608
HapII CCGG 2 cut(s) 372, 1231
HhaI GCGC 2 cut(s) 371, 1165
Hin6I GCGC 2 cut(s) 369, 1163
HinP1I GCGC 2 cut(s) 369, 1163
HincII GTYRAC 1 cut(s) 1507
HindII GTYRAC 1 cut(s) 1507
HindIII AAGCTT 1 cut(s) 1570
HinfI GANTC 9 cut(s) 422, 590, 728, 842, 923, 981, 1341, 1380, 1730
HpaI GTTAAC 1 cut(s) 1507
HpaII CCGG 2 cut(s) 372, 1231
HphI GGTGA 3 cut(s) 305, 737, 1661
Hpy166II GTNNAC 2 cut(s) 61, 1507
Hpy8I GTNNAC 2 cut(s) 61, 1507
Hpy99I CGWCG 1 cut(s) 1126
HpyAV CCTTC 5 cut(s) 80, 325, 335, 1319, 1547
HpyCH4III ACNGT 3 cut(s) 736, 853, 1758
HpyCH4IV ACGT 4 cut(s) 1011, 1015, 1070, 1388
HpyCH4V TGCA 4 cut(s) 443, 480, 1065, 1195
HpyF10VI GCNNNNNNNGC 4 cut(s) 1052, 1152, 1174, 1222
HpyF3I CTNAG 4 cut(s) 750, 929, 1239, 1348
HpySE526I ACGT 4 cut(s) 1011, 1015, 1070, 1388
HspAI GCGC 2 cut(s) 369, 1163
Ksp22I TGATCA 4 cut(s) 352, 496, 595, 1309
KspAI GTTAAC 1 cut(s) 1507
LguI GCTCTTC 2 cut(s) 41, 763
LmnI GCTCC 3 cut(s) 378, 915, 1663
Lsp1109I GCAGC 5 cut(s) 138, 815, 1030, 1177, 1339
LweI GCATC 1 cut(s) 1135
MaeI CTAG 6 cut(s) 30, 650, 887, 1037, 1251, 1632
MaeII ACGT 4 cut(s) 1011, 1015, 1070, 1388
MaeIII GTNAC 5 cut(s) 408, 569, 725, 1016, 1649
MfeI CAATTG 1 cut(s) 781
MflI RGATCY 1 cut(s) 799
MhlI GDGCHC 3 cut(s) 758, 904, 1218
MlsI TGGCCA 1 cut(s) 1155
MluNI TGGCCA 1 cut(s) 1155
MlyI GAGTC 2 cut(s) 722, 851
MmeI TCCRAC 3 cut(s) 651, 718, 1502
Mox20I TGGCCA 1 cut(s) 1155
MroXI GAANNNNTTC 2 cut(s) 645, 1465
MscI TGGCCA 1 cut(s) 1155
MseI TTAA 5 cut(s) 686, 1083, 1404, 1506, 1574
MslI CAYNNNNRTG 5 cut(s) 234, 291, 540, 582, 1677
Msp20I TGGCCA 1 cut(s) 1155
MspA1I CMGCKG 1 cut(s) 1352
MspCI CTTAAG 1 cut(s) 1403
MspI CCGG 2 cut(s) 372, 1231
MspR9I CCNGG 4 cut(s) 373, 1143, 1152, 1709
MunI CAATTG 1 cut(s) 781
MvaI CCWGG 3 cut(s) 1143, 1152, 1709
MwoI GCNNNNNNNGC 4 cut(s) 1052, 1152, 1174, 1222
NciI CCSGG 1 cut(s) 373
NlaIV GGNNCC 2 cut(s) 380, 1269
NmuCI GTSAC 5 cut(s) 408, 569, 725, 1016, 1649
NsbI TGCGCA 1 cut(s) 1164
OliI CACNNNNGTG 1 cut(s) 540
PaeR7I CTCGAG 1 cut(s) 1336
PagI TCATGA 4 cut(s) 583, 1030, 1312, 1494
PciSI GCTCTTC 2 cut(s) 41, 763
PdmI GAANNNNTTC 2 cut(s) 645, 1465
PfeI GAWTC 7 cut(s) 422, 590, 923, 981, 1341, 1380, 1730
Pfl23II CGTACG 1 cut(s) 1012
PfoI TCCNGGA 1 cut(s) 1707
PkrI GCNGC 6 cut(s) 128, 663, 830, 1045, 1167, 1354
PleI GAGTC 2 cut(s) 722, 850
PpsI GAGTC 2 cut(s) 722, 850
PshAI GACNNNNGTC 1 cut(s) 1014
PshBI ATTAAT 1 cut(s) 686
Psp124BI GAGCTC 1 cut(s) 758
Psp1406I AACGTT 1 cut(s) 1388
Psp6I CCWGG 3 cut(s) 1141, 1150, 1707
PspFI CCCAGC 1 cut(s) 1750
PspGI CCWGG 3 cut(s) 1141, 1150, 1707
PspLI CGTACG 1 cut(s) 1012
PspN4I GGNNCC 2 cut(s) 380, 1269
PspPI GGNCC 3 cut(s) 507, 1116, 1228
PsuI RGATCY 1 cut(s) 799
PvuII CAGCTG 1 cut(s) 1352
RsaI GTAC 3 cut(s) 248, 884, 1014
RsaNI GTAC 3 cut(s) 247, 883, 1013
RseI CAYNNNNRTG 5 cut(s) 234, 291, 540, 582, 1677
SacI GAGCTC 1 cut(s) 758
SapI GCTCTTC 2 cut(s) 41, 763
SaqAI TTAA 5 cut(s) 686, 1083, 1404, 1506, 1574
SatI GCNGC 6 cut(s) 127, 662, 829, 1044, 1166, 1353
Sau96I GGNCC 3 cut(s) 507, 1116, 1228
ScaI AGTACT 1 cut(s) 248
SchI GAGTC 2 cut(s) 722, 851
ScrFI CCNGG 4 cut(s) 373, 1143, 1152, 1709
SduI GDGCHC 3 cut(s) 758, 904, 1218
SfaNI GCATC 1 cut(s) 1135
SfcI CTRYAG 1 cut(s) 525
Sfr274I CTCGAG 1 cut(s) 1336
SinI GGWCC 1 cut(s) 507
SlaI CTCGAG 1 cut(s) 1336
SmiMI CAYNNNNRTG 5 cut(s) 234, 291, 540, 582, 1677
SmlI CTYRAG 4 cut(s) 1336, 1403, 1558, 1654
SmoI CTYRAG 4 cut(s) 1336, 1403, 1558, 1654
SsiI CCGC 2 cut(s) 662, 1661
SspI AATATT 1 cut(s) 138
SspMI CTAG 6 cut(s) 30, 650, 887, 1037, 1251, 1632
SstI GAGCTC 1 cut(s) 758
StyD4I CCNGG 4 cut(s) 371, 1141, 1150, 1707
TaaI ACNGT 3 cut(s) 736, 853, 1758
TaiI ACGT 4 cut(s) 1014, 1018, 1073, 1391
TaqI TCGA 6 cut(s) 337, 731, 979, 1104, 1297, 1337
TaqII GACCGA 1 cut(s) 809
TatI WGTACW 1 cut(s) 246
TauI GCSGC 1 cut(s) 664
TfiI GAWTC 7 cut(s) 422, 590, 923, 981, 1341, 1380, 1730
Tru1I TTAA 5 cut(s) 686, 1083, 1404, 1506, 1574
Tru9I TTAA 5 cut(s) 686, 1083, 1404, 1506, 1574
TscAI CASTG 2 cut(s) 259, 856
TseFI GTSAC 5 cut(s) 408, 569, 725, 1016, 1649
TseI GCWGC 5 cut(s) 126, 828, 1043, 1165, 1352
Tsp45I GTSAC 5 cut(s) 408, 569, 725, 1016, 1649
TspGWI ACGGA 2 cut(s) 46, 835
TspRI CASTG 2 cut(s) 259, 856
Vha464I CTTAAG 1 cut(s) 1403
VpaK11BI GGWCC 1 cut(s) 507
VspI ATTAAT 1 cut(s) 686
XagI CCTNNNNNAGG 1 cut(s) 329
XapI RAATTY 5 cut(s) 643, 717, 1059, 1100, 1397
XhoI CTCGAG 1 cut(s) 1336
XmiI GTMKAC 1 cut(s) 60
XmnI GAANNNNTTC 2 cut(s) 645, 1465
XspI CTAG 6 cut(s) 30, 650, 887, 1037, 1251, 1632
ZrmI AGTACT 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.