Rmu_sc0018838.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018838.1
Physical Location & Seq
Reverse (-)
1 .. 448
448 bp
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UTR
Exon/CDS
Intron
Rmu_sc0018838.1_g000001.1.cds

Sequence Viewer

Length: 441 bp
atgccagacatggatgatcaatatcttagtggatttaatctagaagataatgtggaacagggaacaaagtatttctcatttaaattatttgacacttccgcagcatatctagacatctcttcacagggaaaaccaaagcttatgttttcaaaaaatggtcggaactggtcagtctactgggagacaaaaaagaataaatgtgacatctatggagcatgtggaccttttggggtttgcaacatctctgaatctccaatctgcaagtgtttgaaagggtttgtgccaagttcaaaacaggaatggagcaaaggaaaccggacagctgggtgcgtaaggcaaaccgaattgttctgtgagagacaaacagataagaagtcatactcattgcaaggaaaacaaggttacaatgatgataagttttggaagatgataggggtaaaa

Protein Analysis

147

Amino Acids

16.8

Weight (kDa)

8.77

Isoelectric Point (pI)

37.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018511)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 174
AciI CCGC 1 cut(s) 99
AgsI TTSAA 3 cut(s) 150, 271, 291
AluBI AGCT 2 cut(s) 139, 323
AluI AGCT 2 cut(s) 139, 323
Alw26I GTCTC 2 cut(s) 176, 352
ApeKI GCWGC 1 cut(s) 101
AspS9I GGNCC 1 cut(s) 221
AvaII GGWCC 1 cut(s) 221
BbvI GCAGC 1 cut(s) 113
BclI TGATCA 1 cut(s) 16
BcoDI GTCTC 2 cut(s) 176, 352
BfaI CTAG 2 cut(s) 41, 110
BisI GCNGC 1 cut(s) 102
BlsI GCNGC 1 cut(s) 103
Bme18I GGWCC 1 cut(s) 221
BmgT120I GGNCC 1 cut(s) 221
BmrI ACTGGG 1 cut(s) 187
BmuI ACTGGG 1 cut(s) 187
BsaBI GATNNNNATC 1 cut(s) 21
BsaWI WCCGGW 1 cut(s) 315
Bse1I ACTGG 2 cut(s) 170, 182
Bse3DI GCAATG 1 cut(s) 383
Bse8I GATNNNNATC 1 cut(s) 21
BseGI GGATG 1 cut(s) 19
BseJI GATNNNNATC 1 cut(s) 21
BseMI GCAATG 1 cut(s) 383
BseNI ACTGG 2 cut(s) 170, 182
BseXI GCAGC 1 cut(s) 113
BseYI CCCAGC 1 cut(s) 323
BsiSI CCGG 1 cut(s) 316
BsmAI GTCTC 2 cut(s) 176, 352
Bsp143I GATC 1 cut(s) 16
BspACI CCGC 1 cut(s) 99
BsrDI GCAATG 1 cut(s) 383
BsrI ACTGG 2 cut(s) 170, 182
BssMI GATC 1 cut(s) 16
Bst6I CTCTTC 1 cut(s) 124
BstDEI CTNAG 1 cut(s) 26
BstF5I GGATG 1 cut(s) 19
BstKTI GATC 1 cut(s) 19
BstMAI GTCTC 2 cut(s) 176, 352
BstMBI GATC 1 cut(s) 16
BstNSI RCATGY 1 cut(s) 219
BstV1I GCAGC 1 cut(s) 113
BtsCI GGATG 1 cut(s) 19
Cfr13I GGNCC 1 cut(s) 221
CviAII CATG 2 cut(s) 10, 216
CviJI RGCY 2 cut(s) 139, 323
CviKI_1 RGCY 2 cut(s) 139, 323
DdeI CTNAG 1 cut(s) 26
DpnI GATC 1 cut(s) 18
DpnII GATC 1 cut(s) 16
DraI TTTAAA 1 cut(s) 82
Eam1104I CTCTTC 1 cut(s) 124
EarI CTCTTC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 221
FaeI CATG 2 cut(s) 13, 219
FaiI YATR 6 cut(s) 11, 106, 143, 210, 217, 379
FatI CATG 2 cut(s) 9, 215
FbaI TGATCA 1 cut(s) 16
FblI GTMKAC 1 cut(s) 174
Fnu4HI GCNGC 1 cut(s) 102
FokI GGATG 1 cut(s) 26
Fsp4HI GCNGC 1 cut(s) 102
FspBI CTAG 2 cut(s) 41, 110
GluI GCNGC 1 cut(s) 102
GsaI CCCAGC 1 cut(s) 327
HapII CCGG 1 cut(s) 316
Hin1II CATG 2 cut(s) 13, 219
HindIII AAGCTT 1 cut(s) 137
HinfI GANTC 1 cut(s) 248
HpaII CCGG 1 cut(s) 316
Hpy166II GTNNAC 2 cut(s) 175, 221
Hpy188I TCNGA 2 cut(s) 162, 247
Hpy188III TCNNGA 2 cut(s) 41, 110
Hpy8I GTNNAC 2 cut(s) 175, 221
HpyCH4V TGCA 3 cut(s) 237, 261, 388
HpyF3I CTNAG 1 cut(s) 26
Hsp92II CATG 2 cut(s) 13, 219
Ksp22I TGATCA 1 cut(s) 16
Kzo9I GATC 1 cut(s) 16
LmnI GCTCC 2 cut(s) 212, 303
LpnPI CCDG 8 cut(s) 18, 44, 110, 151, 163, 281, 309, 329
Lsp1109I GCAGC 1 cut(s) 113
MaeI CTAG 2 cut(s) 41, 110
MaeIII GTNAC 2 cut(s) 200, 401
MalI GATC 1 cut(s) 18
MboI GATC 1 cut(s) 16
MboII GAAGA 3 cut(s) 56, 111, 436
MluCI AATT 2 cut(s) 83, 344
MmeI TCCRAC 1 cut(s) 140
MseI TTAA 2 cut(s) 36, 81
MspA1I CMGCKG 1 cut(s) 323
MspI CCGG 1 cut(s) 316
NdeII GATC 1 cut(s) 16
NlaIII CATG 2 cut(s) 13, 219
NmuCI GTSAC 1 cut(s) 200
NspI RCATGY 1 cut(s) 219
PfeI GAWTC 1 cut(s) 248
PkrI GCNGC 1 cut(s) 103
PspFI CCCAGC 1 cut(s) 323
PspPI GGNCC 1 cut(s) 221
PvuII CAGCTG 1 cut(s) 323
SaqAI TTAA 2 cut(s) 36, 81
SatI GCNGC 1 cut(s) 102
Sau3AI GATC 1 cut(s) 16
Sau96I GGNCC 1 cut(s) 221
SetI ASST 4 cut(s) 141, 226, 325, 403
SinI GGWCC 1 cut(s) 221
SmiI ATTTAAAT 1 cut(s) 82
Sse9I AATT 2 cut(s) 83, 344
SsiI CCGC 1 cut(s) 99
SspMI CTAG 2 cut(s) 41, 110
SwaI ATTTAAAT 1 cut(s) 82
TasI AATT 2 cut(s) 83, 344
TfiI GAWTC 1 cut(s) 248
Tru1I TTAA 2 cut(s) 36, 81
Tru9I TTAA 2 cut(s) 36, 81
TseFI GTSAC 1 cut(s) 200
TseI GCWGC 1 cut(s) 101
Tsp45I GTSAC 1 cut(s) 200
VpaK11BI GGWCC 1 cut(s) 221
XbaI TCTAGA 2 cut(s) 40, 109
XceI RCATGY 1 cut(s) 219
XmiI GTMKAC 1 cut(s) 174
XspI CTAG 2 cut(s) 41, 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.