Core-2/I-Branching enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32290 |
| fragaria_vesca | FvH4_2g29000 |
| malus_domestica | MD00G1144500.v1.1 |
| prunus_persica | Prupe.7G026200_v2.0.a1 |
| pyrus_communis | pycom15g11340 |
| rosa_chinensis | RchiOBHm_Chr6g0297881 |
| rosa_laevigata | RLG00000011554 |
| rosa_multiflora | Rmu_co8427971.1_g000001 Rmu_sc0019614.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00170120 |
| rosa_rugosa | Rorug06G0276500 |
| rosa_samantha | Rh6AG387000 Rh6BG395500 Rh6CG401300 Rh6DG387800 |
| rosa_wichuraiana | Rw6G033720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 655 |
| AatII | GACGTC | 1 cut(s) | 1098 |
| Acc36I | ACCTGC | 1 cut(s) | 655 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1005 |
| AccBSI | CCGCTC | 1 cut(s) | 781 |
| AccI | GTMKAC | 1 cut(s) | 894 |
| AccII | CGCG | 7 cut(s) | 460, 479, 512, 575, 640, 837, 1043 |
| AccIII | TCCGGA | 1 cut(s) | 684 |
| AclWI | GGATC | 3 cut(s) | 485, 695, 1022 |
| AcoI | YGGCCR | 3 cut(s) | 400, 570, 898 |
| AcuI | CTGAAG | 2 cut(s) | 295, 731 |
| AcvI | CACGTG | 2 cut(s) | 792, 874 |
| AcyI | GRCGYC | 3 cut(s) | 149, 390, 1095 |
| AdeI | CACNNNGTG | 1 cut(s) | 907 |
| AfaI | GTAC | 5 cut(s) | 335, 560, 623, 914, 974 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 386, 429, 568, 930, 974, 1005 |
| AflIII | ACRYGT | 2 cut(s) | 789, 791 |
| AgsI | TTSAA | 3 cut(s) | 238, 550, 766 |
| AjiI | CACGTC | 1 cut(s) | 928 |
| AjnI | CCWGG | 3 cut(s) | 230, 672, 968 |
| AleI | CACNNNNGTG | 1 cut(s) | 872 |
| AluBI | AGCT | 2 cut(s) | 588, 769 |
| AluI | AGCT | 2 cut(s) | 588, 769 |
| Alw26I | GTCTC | 1 cut(s) | 1101 |
| AlwI | GGATC | 3 cut(s) | 485, 695, 1022 |
| Ama87I | CYCGRG | 2 cut(s) | 210, 220 |
| Aor13HI | TCCGGA | 1 cut(s) | 684 |
| AoxI | GGCC | 8 cut(s) | 224, 318, 400, 570, 644, 898, 932, 965 |
| ApeKI | GCWGC | 4 cut(s) | 172, 280, 481, 1014 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 587 |
| AspLEI | GCGC | 5 cut(s) | 462, 481, 514, 640, 837 |
| AspS9I | GGNCC | 9 cut(s) | 319, 644, 706, 756, 882, 932, 937, 966, 1008 |
| AsuC2I | CCSGG | 6 cut(s) | 211, 212, 404, 496, 886, 905 |
| AsuHPI | GGTGA | 8 cut(s) | 64, 70, 259, 427, 679, 748, 919, 997 |
| AsuII | TTCGAA | 1 cut(s) | 416 |
| AvaI | CYCGRG | 2 cut(s) | 210, 220 |
| AvaII | GGWCC | 5 cut(s) | 706, 756, 882, 937, 1008 |
| AxyI | CCTNAGG | 1 cut(s) | 801 |
| BaeGI | GKGCMC | 1 cut(s) | 40 |
| BauI | CACGAG | 1 cut(s) | 526 |
| BbrPI | CACGTG | 2 cut(s) | 792, 874 |
| BbsI | GAAGAC | 2 cut(s) | 61, 385 |
| BbvCI | CCTCAGC | 1 cut(s) | 953 |
| BbvI | GCAGC | 4 cut(s) | 159, 267, 468, 1026 |
| BceAI | ACGGC | 5 cut(s) | 47, 268, 913, 991, 1057 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 40, 74 |
| BciT130I | CCWGG | 3 cut(s) | 232, 674, 970 |
| BcnI | CCSGG | 6 cut(s) | 211, 212, 404, 496, 886, 905 |
| BcoDI | GTCTC | 1 cut(s) | 1101 |
| BfuAI | ACCTGC | 1 cut(s) | 655 |
| Bme1390I | CCNGG | 9 cut(s) | 211, 212, 232, 404, 496, 674, 886, 905, 970 |
| Bme18I | GGWCC | 5 cut(s) | 706, 756, 882, 937, 1008 |
| BmeT110I | CYCGRG | 2 cut(s) | 210, 220 |
| BmgBI | CACGTC | 1 cut(s) | 928 |
| BmgT120I | GGNCC | 9 cut(s) | 319, 644, 706, 756, 882, 932, 937, 966, 1008 |
| BmiI | GGNNCC | 3 cut(s) | 321, 707, 933 |
| BmrFI | CCNGG | 9 cut(s) | 211, 212, 232, 404, 496, 674, 886, 905, 970 |
| BmsI | GCATC | 2 cut(s) | 197, 540 |
| BpiI | GAAGAC | 2 cut(s) | 61, 385 |
| BpmI | CTGGAG | 1 cut(s) | 695 |
| Bpu10I | CCTNAGC | 1 cut(s) | 953 |
| Bpu14I | TTCGAA | 1 cut(s) | 416 |
| BpuMI | CCSGG | 6 cut(s) | 211, 212, 404, 496, 886, 905 |
| BsaAI | YACGTR | 3 cut(s) | 558, 792, 874 |
| BsaHI | GRCGYC | 3 cut(s) | 149, 390, 1095 |
| BsaJI | CCNNGG | 4 cut(s) | 210, 230, 494, 968 |
| BsaWI | WCCGGW | 3 cut(s) | 132, 561, 684 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 905, 935 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 386, 429, 568, 930, 974, 1005 |
| Bse118I | RCCGGY | 1 cut(s) | 398 |
| Bse1I | ACTGG | 1 cut(s) | 884 |
| Bse21I | CCTNAGG | 1 cut(s) | 801 |
| BseAI | TCCGGA | 1 cut(s) | 684 |
| BseBI | CCWGG | 3 cut(s) | 232, 674, 970 |
| BseDI | CCNNGG | 4 cut(s) | 210, 230, 494, 968 |
| BseGI | GGATG | 1 cut(s) | 531 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 386, 429, 568, 930, 974, 1005 |
| BseMII | CTCAG | 2 cut(s) | 792, 944 |
| BseNI | ACTGG | 1 cut(s) | 884 |
| BseRI | GAGGAG | 2 cut(s) | 282, 692 |
| BseSI | GKGCMC | 1 cut(s) | 40 |
| BseX3I | CGGCCG | 1 cut(s) | 400 |
| BseXI | GCAGC | 4 cut(s) | 159, 267, 468, 1026 |
| BseYI | CCCAGC | 1 cut(s) | 426 |
| Bsh1236I | CGCG | 7 cut(s) | 460, 479, 512, 575, 640, 837, 1043 |
| Bsh1285I | CGRYCG | 1 cut(s) | 403 |
| BshFI | GGCC | 8 cut(s) | 226, 320, 402, 572, 646, 900, 934, 967 |
| BsiEI | CGRYCG | 1 cut(s) | 403 |
| BsiHKCI | CYCGRG | 2 cut(s) | 210, 220 |
| BsiWI | CGTACG | 1 cut(s) | 621 |
| BslFI | GGGAC | 1 cut(s) | 800 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 386, 429, 568, 930, 974, 1005 |
| BsmAI | GTCTC | 1 cut(s) | 1101 |
| BsmFI | GGGAC | 1 cut(s) | 800 |
| BsnI | GGCC | 8 cut(s) | 226, 320, 402, 572, 646, 900, 934, 967 |
| BsoBI | CYCGRG | 2 cut(s) | 210, 220 |
| Bsp119I | TTCGAA | 1 cut(s) | 416 |
| Bsp1286I | GDGCHC | 1 cut(s) | 40 |
| Bsp13I | TCCGGA | 1 cut(s) | 684 |
| Bsp1407I | TGTACA | 1 cut(s) | 333 |
| Bsp143I | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| Bsp68I | TCGCGA | 1 cut(s) | 1043 |
| BspANI | GGCC | 8 cut(s) | 226, 320, 402, 572, 646, 900, 934, 967 |
| BspCNI | CTCAG | 2 cut(s) | 793, 945 |
| BspEI | TCCGGA | 1 cut(s) | 684 |
| BspFNI | CGCG | 7 cut(s) | 460, 479, 512, 575, 640, 837, 1043 |
| BspLI | GGNNCC | 3 cut(s) | 321, 707, 933 |
| BspMI | ACCTGC | 1 cut(s) | 655 |
| BspPI | GGATC | 3 cut(s) | 485, 695, 1022 |
| BspQI | GCTCTTC | 1 cut(s) | 578 |
| BspT104I | TTCGAA | 1 cut(s) | 416 |
| BsrBI | CCGCTC | 1 cut(s) | 781 |
| BsrFI | RCCGGY | 1 cut(s) | 398 |
| BsrGI | TGTACA | 1 cut(s) | 333 |
| BsrI | ACTGG | 1 cut(s) | 884 |
| BssAI | RCCGGY | 1 cut(s) | 398 |
| BssECI | CCNNGG | 4 cut(s) | 210, 230, 494, 968 |
| BssMI | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| BssNI | GRCGYC | 3 cut(s) | 149, 390, 1095 |
| BssSI | CACGAG | 1 cut(s) | 526 |
| Bst2BI | CACGAG | 1 cut(s) | 526 |
| Bst2UI | CCWGG | 3 cut(s) | 232, 674, 970 |
| Bst4CI | ACNGT | 1 cut(s) | 76 |
| Bst6I | CTCTTC | 1 cut(s) | 578 |
| BstACI | GRCGYC | 3 cut(s) | 149, 390, 1095 |
| BstAUI | TGTACA | 1 cut(s) | 333 |
| BstBAI | YACGTR | 3 cut(s) | 558, 792, 874 |
| BstBI | TTCGAA | 1 cut(s) | 416 |
| BstC8I | GCNNGC | 8 cut(s) | 53, 165, 400, 570, 723, 779, 854, 858 |
| BstDEI | CTNAG | 2 cut(s) | 801, 953 |
| BstF5I | GGATG | 1 cut(s) | 531 |
| BstFNI | CGCG | 7 cut(s) | 460, 479, 512, 575, 640, 837, 1043 |
| BstHHI | GCGC | 5 cut(s) | 462, 481, 514, 640, 837 |
| BstKTI | GATC | 6 cut(s) | 9, 493, 615, 690, 945, 1030 |
| BstMAI | GTCTC | 1 cut(s) | 1101 |
| BstMBI | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| BstMCI | CGRYCG | 1 cut(s) | 403 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 10, 169, 727, 862, 1020 |
| BstNI | CCWGG | 3 cut(s) | 232, 674, 970 |
| BstNSI | RCATGY | 2 cut(s) | 55, 835 |
| BstSCI | CCNGG | 9 cut(s) | 209, 210, 230, 402, 494, 672, 884, 903, 968 |
| BstSLI | GKGCMC | 1 cut(s) | 40 |
| BstUI | CGCG | 7 cut(s) | 460, 479, 512, 575, 640, 837, 1043 |
| BstV1I | GCAGC | 4 cut(s) | 159, 267, 468, 1026 |
| BstV2I | GAAGAC | 2 cut(s) | 61, 385 |
| BstZI | CGGCCG | 1 cut(s) | 400 |
| Bsu36I | CCTNAGG | 1 cut(s) | 801 |
| BsuRI | GGCC | 8 cut(s) | 226, 320, 402, 572, 646, 900, 934, 967 |
| BtrI | CACGTC | 1 cut(s) | 928 |
| BtsCI | GGATG | 1 cut(s) | 531 |
| BtuMI | TCGCGA | 1 cut(s) | 1043 |
| BveI | ACCTGC | 1 cut(s) | 655 |
| Cac8I | GCNNGC | 8 cut(s) | 53, 165, 400, 570, 723, 779, 854, 858 |
| CfoI | GCGC | 5 cut(s) | 462, 481, 514, 640, 837 |
| Cfr10I | RCCGGY | 1 cut(s) | 398 |
| Cfr13I | GGNCC | 9 cut(s) | 319, 644, 706, 756, 882, 932, 937, 966, 1008 |
| Cfr9I | CCCGGG | 1 cut(s) | 210 |
| CseI | GACGC | 7 cut(s) | 157, 194, 379, 564, 574, 659, 1070 |
| Csp6I | GTAC | 5 cut(s) | 334, 559, 622, 913, 973 |
| CviAII | CATG | 3 cut(s) | 52, 259, 832 |
| CviQI | GTAC | 5 cut(s) | 334, 559, 622, 913, 973 |
| DdeI | CTNAG | 2 cut(s) | 801, 953 |
| DpnI | GATC | 6 cut(s) | 8, 492, 614, 689, 944, 1029 |
| DpnII | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| DraIII | CACNNNGTG | 1 cut(s) | 907 |
| EaeI | YGGCCR | 3 cut(s) | 400, 570, 898 |
| EagI | CGGCCG | 1 cut(s) | 400 |
| Eam1104I | CTCTTC | 1 cut(s) | 578 |
| EarI | CTCTTC | 1 cut(s) | 578 |
| EciI | GGCGGA | 2 cut(s) | 150, 442 |
| EclXI | CGGCCG | 1 cut(s) | 400 |
| Eco47I | GGWCC | 5 cut(s) | 706, 756, 882, 937, 1008 |
| Eco52I | CGGCCG | 1 cut(s) | 400 |
| Eco57I | CTGAAG | 2 cut(s) | 295, 731 |
| Eco72I | CACGTG | 2 cut(s) | 792, 874 |
| Eco81I | CCTNAGG | 1 cut(s) | 801 |
| Eco88I | CYCGRG | 2 cut(s) | 210, 220 |
| EcoO109I | RGGNCCY | 2 cut(s) | 319, 706 |
| EcoRII | CCWGG | 3 cut(s) | 230, 672, 968 |
| FaeI | CATG | 3 cut(s) | 55, 262, 835 |
| FaiI | YATR | 6 cut(s) | 44, 53, 260, 656, 833, 1085 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 572, 604 |
| FaqI | GGGAC | 1 cut(s) | 800 |
| FatI | CATG | 3 cut(s) | 51, 258, 831 |
| FauI | CCCGC | 4 cut(s) | 285, 430, 669, 1062 |
| FblI | GTMKAC | 1 cut(s) | 894 |
| FokI | GGATG | 1 cut(s) | 518 |
| GlaI | GCGC | 5 cut(s) | 461, 480, 513, 639, 836 |
| GsaI | CCCAGC | 1 cut(s) | 430 |
| GsuI | CTGGAG | 1 cut(s) | 695 |
| HaeIII | GGCC | 8 cut(s) | 226, 320, 402, 572, 646, 900, 934, 967 |
| HgaI | GACGC | 7 cut(s) | 157, 194, 379, 564, 574, 659, 1070 |
| HhaI | GCGC | 5 cut(s) | 462, 481, 514, 640, 837 |
| Hin1I | GRCGYC | 3 cut(s) | 149, 390, 1095 |
| Hin1II | CATG | 3 cut(s) | 55, 262, 835 |
| Hin6I | GCGC | 5 cut(s) | 460, 479, 512, 638, 835 |
| HinP1I | GCGC | 5 cut(s) | 460, 479, 512, 638, 835 |
| HincII | GTYRAC | 4 cut(s) | 217, 829, 895, 994 |
| HindII | GTYRAC | 4 cut(s) | 217, 829, 895, 994 |
| HinfI | GANTC | 4 cut(s) | 201, 306, 339, 363 |
| HpaI | GTTAAC | 1 cut(s) | 217 |
| HphI | GGTGA | 8 cut(s) | 64, 70, 259, 427, 679, 748, 919, 997 |
| Hpy166II | GTNNAC | 8 cut(s) | 217, 349, 435, 829, 877, 895, 988, 994 |
| Hpy188I | TCNGA | 2 cut(s) | 925, 1106 |
| Hpy188III | TCNNGA | 4 cut(s) | 238, 685, 709, 1042 |
| Hpy8I | GTNNAC | 8 cut(s) | 217, 349, 435, 829, 877, 895, 988, 994 |
| Hpy99I | CGWCG | 6 cut(s) | 68, 491, 580, 899, 929, 983 |
| HpyAV | CCTTC | 3 cut(s) | 164, 265, 556 |
| HpyCH4III | ACNGT | 1 cut(s) | 76 |
| HpyCH4IV | ACGT | 8 cut(s) | 345, 557, 791, 873, 911, 927, 990, 1095 |
| HpyCH4V | TGCA | 2 cut(s) | 51, 531 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 10, 169, 727, 862, 1020 |
| HpyF3I | CTNAG | 2 cut(s) | 801, 953 |
| HpySE526I | ACGT | 8 cut(s) | 345, 557, 791, 873, 911, 927, 990, 1095 |
| Hsp92I | GRCGYC | 3 cut(s) | 149, 390, 1095 |
| Hsp92II | CATG | 3 cut(s) | 55, 262, 835 |
| HspAI | GCGC | 5 cut(s) | 460, 479, 512, 638, 835 |
| Kpn2I | TCCGGA | 1 cut(s) | 684 |
| KroI | GCCGGC | 1 cut(s) | 398 |
| KroNI | GCCGGC | 1 cut(s) | 400 |
| KspAI | GTTAAC | 1 cut(s) | 217 |
| Kzo9I | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| LguI | GCTCTTC | 1 cut(s) | 578 |
| LmnI | GCTCC | 5 cut(s) | 172, 295, 301, 663, 774 |
| Lsp1109I | GCAGC | 4 cut(s) | 159, 267, 468, 1026 |
| LweI | GCATC | 2 cut(s) | 197, 540 |
| MaeII | ACGT | 8 cut(s) | 345, 557, 791, 873, 911, 927, 990, 1095 |
| MaeIII | GTNAC | 5 cut(s) | 76, 740, 794, 907, 1091 |
| MalI | GATC | 6 cut(s) | 8, 492, 614, 689, 944, 1029 |
| MbiI | CCGCTC | 1 cut(s) | 781 |
| MboI | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| MboII | GAAGA | 5 cut(s) | 61, 301, 385, 592, 595 |
| MhlI | GDGCHC | 1 cut(s) | 40 |
| MluCI | AATT | 1 cut(s) | 808 |
| MmeI | TCCRAC | 1 cut(s) | 948 |
| MroI | TCCGGA | 1 cut(s) | 684 |
| MroNI | GCCGGC | 1 cut(s) | 398 |
| MroXI | GAANNNNTTC | 1 cut(s) | 587 |
| MseI | TTAA | 1 cut(s) | 216 |
| MslI | CAYNNNNRTG | 1 cut(s) | 872 |
| MspA1I | CMGCKG | 4 cut(s) | 172, 280, 430, 748 |
| MspR9I | CCNGG | 9 cut(s) | 211, 212, 232, 404, 496, 674, 886, 905, 970 |
| MvaI | CCWGG | 3 cut(s) | 232, 674, 970 |
| MvnI | CGCG | 7 cut(s) | 460, 479, 512, 575, 640, 837, 1043 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 10, 169, 727, 862, 1020 |
| NaeI | GCCGGC | 1 cut(s) | 400 |
| NciI | CCSGG | 6 cut(s) | 211, 212, 404, 496, 886, 905 |
| NdeII | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| NgoMIV | GCCGGC | 1 cut(s) | 398 |
| NlaIII | CATG | 3 cut(s) | 55, 262, 835 |
| NlaIV | GGNNCC | 3 cut(s) | 321, 707, 933 |
| NmeAIII | GCCGAG | 1 cut(s) | 706 |
| NmuCI | GTSAC | 4 cut(s) | 76, 740, 907, 1091 |
| NruI | TCGCGA | 1 cut(s) | 1043 |
| NspI | RCATGY | 2 cut(s) | 55, 835 |
| NspV | TTCGAA | 1 cut(s) | 416 |
| OliI | CACNNNNGTG | 1 cut(s) | 872 |
| PaeI | GCATGC | 1 cut(s) | 55 |
| PaeR7I | CTCGAG | 1 cut(s) | 220 |
| PaqCI | CACCTGC | 1 cut(s) | 655 |
| PciSI | GCTCTTC | 1 cut(s) | 578 |
| PcsI | WCGNNNNNNNCGW | 8 cut(s) | 72, 351, 483, 572, 600, 621, 924, 987 |
| PdiI | GCCGGC | 1 cut(s) | 400 |
| PdmI | GAANNNNTTC | 1 cut(s) | 587 |
| PfeI | GAWTC | 4 cut(s) | 201, 306, 339, 363 |
| Pfl23II | CGTACG | 1 cut(s) | 621 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1005 |
| PmaCI | CACGTG | 2 cut(s) | 792, 874 |
| PmlI | CACGTG | 2 cut(s) | 792, 874 |
| Ppu21I | YACGTR | 3 cut(s) | 558, 792, 874 |
| PpuMI | RGGWCCY | 1 cut(s) | 706 |
| Psp5II | RGGWCCY | 1 cut(s) | 706 |
| Psp6I | CCWGG | 3 cut(s) | 230, 672, 968 |
| PspCI | CACGTG | 2 cut(s) | 792, 874 |
| PspFI | CCCAGC | 1 cut(s) | 426 |
| PspGI | CCWGG | 3 cut(s) | 230, 672, 968 |
| PspLI | CGTACG | 1 cut(s) | 621 |
| PspN4I | GGNNCC | 3 cut(s) | 321, 707, 933 |
| PspPI | GGNCC | 9 cut(s) | 319, 644, 706, 756, 882, 932, 937, 966, 1008 |
| PspPPI | RGGWCCY | 1 cut(s) | 706 |
| PspXI | VCTCGAGB | 1 cut(s) | 220 |
| RruI | TCGCGA | 1 cut(s) | 1043 |
| RsaI | GTAC | 5 cut(s) | 335, 560, 623, 914, 974 |
| RsaNI | GTAC | 5 cut(s) | 334, 559, 622, 913, 973 |
| RseI | CAYNNNNRTG | 1 cut(s) | 872 |
| SalI | GTCGAC | 1 cut(s) | 893 |
| SapI | GCTCTTC | 1 cut(s) | 578 |
| SaqAI | TTAA | 1 cut(s) | 216 |
| Sau3AI | GATC | 6 cut(s) | 6, 490, 612, 687, 942, 1027 |
| Sau96I | GGNCC | 9 cut(s) | 319, 644, 706, 756, 882, 932, 937, 966, 1008 |
| ScrFI | CCNGG | 9 cut(s) | 211, 212, 232, 404, 496, 674, 886, 905, 970 |
| SduI | GDGCHC | 1 cut(s) | 40 |
| SfaNI | GCATC | 2 cut(s) | 197, 540 |
| Sfr274I | CTCGAG | 1 cut(s) | 220 |
| SfuI | TTCGAA | 1 cut(s) | 416 |
| SinI | GGWCC | 5 cut(s) | 706, 756, 882, 937, 1008 |
| SlaI | CTCGAG | 1 cut(s) | 220 |
| SmaI | CCCGGG | 1 cut(s) | 212 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 872 |
| SmlI | CTYRAG | 1 cut(s) | 220 |
| SmoI | CTYRAG | 1 cut(s) | 220 |
| SphI | GCATGC | 1 cut(s) | 55 |
| Sse9I | AATT | 1 cut(s) | 808 |
| StyD4I | CCNGG | 9 cut(s) | 209, 210, 230, 402, 494, 672, 884, 903, 968 |
| TaaI | ACNGT | 1 cut(s) | 76 |
| TaiI | ACGT | 8 cut(s) | 348, 560, 794, 876, 914, 930, 993, 1098 |
| TaqI | TCGA | 9 cut(s) | 221, 416, 486, 503, 578, 594, 603, 894, 1068 |
| TasI | AATT | 1 cut(s) | 808 |
| TatI | WGTACW | 1 cut(s) | 333 |
| TauI | GCSGC | 6 cut(s) | 209, 229, 465, 575, 638, 751 |
| TfiI | GAWTC | 4 cut(s) | 201, 306, 339, 363 |
| Tru1I | TTAA | 1 cut(s) | 216 |
| Tru9I | TTAA | 1 cut(s) | 216 |
| TseFI | GTSAC | 4 cut(s) | 76, 740, 907, 1091 |
| TseI | GCWGC | 4 cut(s) | 172, 280, 481, 1014 |
| Tsp45I | GTSAC | 4 cut(s) | 76, 740, 907, 1091 |
| TspDTI | ATGAA | 3 cut(s) | 247, 401, 580 |
| TspGWI | ACGGA | 1 cut(s) | 1020 |
| TspMI | CCCGGG | 1 cut(s) | 210 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1005 |
| VpaK11BI | GGWCC | 5 cut(s) | 706, 756, 882, 937, 1008 |
| XceI | RCATGY | 2 cut(s) | 55, 835 |
| XhoI | CTCGAG | 1 cut(s) | 220 |
| XmaI | CCCGGG | 1 cut(s) | 210 |
| XmiI | GTMKAC | 1 cut(s) | 894 |
| XmnI | GAANNNNTTC | 1 cut(s) | 587 |
| ZraI | GACGTC | 1 cut(s) | 1096 |