Rmu_sc0021237.1_g000001
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021237.1
Physical Location & Seq
Reverse (-)
2 .. 643
642 bp
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UTR
Exon/CDS
Intron
Rmu_sc0021237.1_g000001.1.cds

Sequence Viewer

Length: 222 bp
atgaagctctcagccatagagatatataatgaagttgtcggagatctccttagctccgagaatgctcaacttaggctgctagatgatccagaggtgagtactaaagcttggactacatttgatagcaaagagccaaagacagtaatttcgctcaaaagttcgggtgatgggccaagtggtgggataaagatggatgacgatgtagaagaagaatatcatggt

Protein Analysis

74

Amino Acids

8.09

Weight (kDa)

4.27

Isoelectric Point (pI)

49.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018898)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 179
AclWI GGATC 1 cut(s) 80
AfaI GTAC 1 cut(s) 100
AfiI CCNNNNNNNGG 1 cut(s) 179
AluBI AGCT 3 cut(s) 7, 54, 107
AluI AGCT 3 cut(s) 7, 54, 107
AlwI GGATC 1 cut(s) 80
AoxI GGCC 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 76
ArsI GACNNNNNNTTYG 2 cut(s) 130, 162
AspS9I GGNCC 1 cut(s) 170
AsuHPI GGTGA 2 cut(s) 106, 176
BbvI GCAGC 1 cut(s) 63
BccI CCATC 2 cut(s) 161, 184
BfaI CTAG 1 cut(s) 80
BglII AGATCT 1 cut(s) 43
BisI GCNGC 1 cut(s) 77
BlsI GCNGC 1 cut(s) 78
BmcAI AGTACT 1 cut(s) 100
BmgT120I GGNCC 1 cut(s) 170
Bpu10I CCTNAGC 1 cut(s) 50
Bsc4I CCNNNNNNNGG 1 cut(s) 179
BseGI GGATG 1 cut(s) 199
BseLI CCNNNNNNNGG 1 cut(s) 179
BseMII CTCAG 1 cut(s) 24
BseXI GCAGC 1 cut(s) 63
BshFI GGCC 1 cut(s) 172
BslI CCNNNNNNNGG 1 cut(s) 179
BsmI GAATGC 1 cut(s) 67
BsnI GGCC 1 cut(s) 172
Bsp143I GATC 2 cut(s) 43, 85
BspANI GGCC 1 cut(s) 172
BspCNI CTCAG 1 cut(s) 23
BspPI GGATC 1 cut(s) 80
BssMI GATC 2 cut(s) 43, 85
Bst4CI ACNGT 1 cut(s) 142
BstDEI CTNAG 3 cut(s) 10, 50, 71
BstF5I GGATG 1 cut(s) 199
BstKTI GATC 2 cut(s) 46, 88
BstMBI GATC 2 cut(s) 43, 85
BstV1I GCAGC 1 cut(s) 63
BstX2I RGATCY 1 cut(s) 43
BstYI RGATCY 1 cut(s) 43
BsuRI GGCC 1 cut(s) 172
BtsCI GGATG 1 cut(s) 199
Cfr13I GGNCC 1 cut(s) 170
Csp6I GTAC 1 cut(s) 99
CviAII CATG 1 cut(s) 218
CviJI RGCY 7 cut(s) 7, 14, 54, 76, 107, 133, 172
CviKI_1 RGCY 7 cut(s) 7, 14, 54, 76, 107, 133, 172
CviQI GTAC 1 cut(s) 99
DdeI CTNAG 3 cut(s) 10, 50, 71
DpnI GATC 2 cut(s) 45, 87
DpnII GATC 2 cut(s) 43, 85
FaeI CATG 1 cut(s) 221
FaiI YATR 4 cut(s) 17, 25, 27, 219
FatI CATG 1 cut(s) 217
Fnu4HI GCNGC 1 cut(s) 77
FokI GGATG 1 cut(s) 206
Fsp4HI GCNGC 1 cut(s) 77
FspBI CTAG 1 cut(s) 80
GluI GCNGC 1 cut(s) 77
HaeIII GGCC 1 cut(s) 172
Hin1II CATG 1 cut(s) 221
HindIII AAGCTT 1 cut(s) 105
HphI GGTGA 2 cut(s) 106, 176
Hpy188I TCNGA 2 cut(s) 41, 58
Hpy188III TCNNGA 1 cut(s) 89
HpyCH4III ACNGT 1 cut(s) 142
HpyF3I CTNAG 3 cut(s) 10, 50, 71
Hsp92II CATG 1 cut(s) 221
Kzo9I GATC 2 cut(s) 43, 85
LmnI GCTCC 1 cut(s) 59
LpnPI CCDG 1 cut(s) 102
Lsp1109I GCAGC 1 cut(s) 63
MaeI CTAG 1 cut(s) 80
MalI GATC 2 cut(s) 45, 87
MboI GATC 2 cut(s) 43, 85
MboII GAAGA 2 cut(s) 218, 221
MflI RGATCY 1 cut(s) 43
MluCI AATT 1 cut(s) 144
MmeI TCCRAC 1 cut(s) 19
MnlI CCTC 1 cut(s) 85
Mva1269I GAATGC 1 cut(s) 67
NdeII GATC 2 cut(s) 43, 85
NlaIII CATG 1 cut(s) 221
PctI GAATGC 1 cut(s) 67
PflMI CCANNNNNTGG 1 cut(s) 179
PkrI GCNGC 1 cut(s) 78
PspPI GGNCC 1 cut(s) 170
PsuI RGATCY 1 cut(s) 43
RsaI GTAC 1 cut(s) 100
RsaNI GTAC 1 cut(s) 99
SatI GCNGC 1 cut(s) 77
Sau3AI GATC 2 cut(s) 43, 85
Sau96I GGNCC 1 cut(s) 170
ScaI AGTACT 1 cut(s) 100
SetI ASST 4 cut(s) 9, 56, 96, 109
SgeI CNNG 6 cut(s) 70, 92, 101, 120, 174, 186
Sse9I AATT 1 cut(s) 144
SspMI CTAG 1 cut(s) 80
TaaI ACNGT 1 cut(s) 142
TasI AATT 1 cut(s) 144
TatI WGTACW 1 cut(s) 98
TseI GCWGC 1 cut(s) 76
TspDTI ATGAA 2 cut(s) 17, 45
Van91I CCANNNNNTGG 1 cut(s) 179
XspI CTAG 1 cut(s) 80
ZrmI AGTACT 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.