Rroxscaffold_3G00267430
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
60474241 .. 60476746
2506 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_3G00267430.1

Sequence Viewer

Length: 183 bp
ATGAGCCCTGCACGAAGTCATGTTGAGCAATCAAACAACACCCTGTTCTTTGCAAGTTGTGCAAAAGAGGTTACTACTAATGCAAAGGTCAATGTGGTAAGGTCGGATAAGGCATTGGTCAACAATTCTCTAGATGCAGAATGTGTTTTCTCAAATGATAAACAAGCTGAATCTTCACACTAG

Protein Analysis

60

Amino Acids

6.53

Weight (kDa)

6.02

Isoelectric Point (pI)

65.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018898)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 1 cut(s) 167
AluI AGCT 1 cut(s) 167
BanII GRGCYC 1 cut(s) 8
BfaI CTAG 2 cut(s) 131, 181
BmsI GCATC 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 8
BstAPI GCANNNNNTGC 1 cut(s) 59
BstMWI GCNNNNNNNGC 1 cut(s) 59
CviAII CATG 1 cut(s) 20
CviJI RGCY 2 cut(s) 6, 167
CviKI_1 RGCY 2 cut(s) 6, 167
Eco24I GRGCYC 1 cut(s) 8
EcoT38I GRGCYC 1 cut(s) 8
FaeI CATG 1 cut(s) 23
FaiI YATR 1 cut(s) 21
FatI CATG 1 cut(s) 19
FriOI GRGCYC 1 cut(s) 8
FspBI CTAG 2 cut(s) 131, 181
Hin1II CATG 1 cut(s) 23
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 1 cut(s) 170
Hpy166II GTNNAC 1 cut(s) 121
Hpy188I TCNGA 1 cut(s) 106
Hpy188III TCNNGA 1 cut(s) 131
Hpy8I GTNNAC 1 cut(s) 121
HpyCH4V TGCA 5 cut(s) 11, 53, 62, 83, 137
HpyF10VI GCNNNNNNNGC 1 cut(s) 59
Hsp92II CATG 1 cut(s) 23
LpnPI CCDG 2 cut(s) 21, 56
LweI GCATC 1 cut(s) 124
MaeI CTAG 2 cut(s) 131, 181
MaeIII GTNAC 1 cut(s) 70
MboII GAAGA 1 cut(s) 165
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 1 cut(s) 124
MmeI TCCRAC 1 cut(s) 84
MnlI CCTC 1 cut(s) 61
MwoI GCNNNNNNNGC 1 cut(s) 59
NlaIII CATG 1 cut(s) 23
PfeI GAWTC 1 cut(s) 170
SduI GDGCHC 1 cut(s) 8
SetI ASST 4 cut(s) 72, 90, 104, 169
SfaNI GCATC 1 cut(s) 124
SgeI CNNG 7 cut(s) 20, 24, 32, 55, 66, 143, 176
Sse9I AATT 1 cut(s) 124
SspMI CTAG 2 cut(s) 131, 181
TasI AATT 1 cut(s) 124
TfiI GAWTC 1 cut(s) 170
XbaI TCTAGA 1 cut(s) 130
XspI CTAG 2 cut(s) 131, 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.