Rmu_sc0021361.1_g000001

MACPF domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021361.1
Physical Location & Seq
Reverse (-)
1 .. 2061
2061 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021361.1_g000001.1.cds

Sequence Viewer

Length: 1219 bp
atgggtggaaaggatatagttcacgtaaagcagttacaaaactcaaaacttgaccctgctgaactgcagaaattgttaaagcaattagctgaagagagattttctgataatgcaaatgaatcttctatatcaaatactgctgatctattaggaaaaatgagggatgaccatcctgttcactgggatattcagagaacattagcatcctcagtaaggcaacccatcgtcactcactcaaggaatgatgatattgttaccattagtgttcgaaggggaggtgttgatgttggtcaaagtcataaccaatggctttcgactatatcacaggcgcctgatgtcatatcaatgtcctttgtgcccataacatcacttttgggtggtgttcaaggcaatggatttcttagccatgcagtaaatctgtaccttagatacaaaccaccaatagaggagcttcaacaattcttagaatttcaattaccacggcaatgggctccagtatatgctgatctgcctcttggtctaaggcggagaagacatgcatccccatcacttcagttcagttttatgggccccaagctatacgttaacactatgaaggttgattccgtaaatcgaccggttacaggaatccgtttgtaccttgaaggtaaaaaaggtgaccatatggcaatccatcttcagcatcttacgagtcttcccagttccttccaagtctcaactgatcacaattatgagcccattgacgagccagaggaacgaggctactttgaacctgtcaagtggagcatattttcacatgtatgcactgccccagtacagtataatggtgcctgcatcaatgactctgcttctattgtgacaaaggcctggtttgaagtcaaggctattggaatgaggaaagttttgttcctgaggcttggattttctacagttgcatctgcaaggatccgaagatcagaatgggaaggctcaagctcatcacgtaagtcaggattcatctcaaccttgatcagcacaaggcttagtgctgcgctcaatccacctgtggcagcaccaccaaaagtggatttgaattcagcagtgtatcctggtggcccacctttaccttccaaggcaccaaaaatggcgacgtttgtagataccaaggaaatgttgagaggtcctgaggacaccccaggatattggatggttaccggagccaagctttgtgtagagggtg

Protein Analysis

406

Amino Acids

45.07

Weight (kDa)

9.08

Isoelectric Point (pI)

49.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010968)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 328, 827, 1114
AciI CCGC 1 cut(s) 526
AclWI GGATC 2 cut(s) 940, 953
AcsI RAATTY 2 cut(s) 467, 1072
AcuI CTGAAG 3 cut(s) 111, 536, 662
AcyI GRCGYC 1 cut(s) 329
AfaI GTAC 3 cut(s) 422, 638, 816
AfiI CCNNNNNNNGG 2 cut(s) 213, 623
AflIII ACRYGT 1 cut(s) 796
AgeI ACCGGT 1 cut(s) 616
AgsI TTSAA 7 cut(s) 386, 455, 473, 644, 770, 875, 1072
AjnI CCWGG 3 cut(s) 866, 1087, 1174
AluBI AGCT 5 cut(s) 89, 451, 577, 975, 1204
AluI AGCT 5 cut(s) 89, 451, 577, 975, 1204
Alw26I GTCTC 1 cut(s) 718
AlwI GGATC 2 cut(s) 940, 953
AoxI GGCC 3 cut(s) 568, 864, 1093
ApaI GGGCCC 1 cut(s) 572
ApeKI GCWGC 2 cut(s) 1028, 1049
ApoI RAATTY 2 cut(s) 467, 1072
AsiGI ACCGGT 1 cut(s) 616
AspLEI GCGC 2 cut(s) 331, 1033
AspS9I GGNCC 4 cut(s) 568, 569, 1094, 1160
AsuHPI GGTGA 1 cut(s) 668
AsuII TTCGAA 1 cut(s) 268
AvaII GGWCC 1 cut(s) 1160
AxyI CCTNAGG 2 cut(s) 911, 1164
BaeGI GKGCMC 2 cut(s) 360, 572
BamHI GGATCC 1 cut(s) 945
BanI GGYRCC 3 cut(s) 328, 827, 1114
BanII GRGCYC 3 cut(s) 493, 572, 738
BbsI GAAGAC 2 cut(s) 538, 686
BbvI GCAGC 2 cut(s) 1015, 1061
BccI CCATC 5 cut(s) 177, 230, 553, 681, 1180
BceAI ACGGC 1 cut(s) 497
BciT130I CCWGG 3 cut(s) 868, 1089, 1176
BciVI GTATCC 1 cut(s) 1095
BclI TGATCA 2 cut(s) 721, 1008
BcoDI GTCTC 1 cut(s) 718
BfmI CTRYAG 2 cut(s) 65, 927
BfoI RGCGCY 1 cut(s) 332
BfuI GTATCC 1 cut(s) 1095
BisI GCNGC 2 cut(s) 1029, 1050
BlsI GCNGC 2 cut(s) 1030, 1051
Bme1390I CCNGG 3 cut(s) 868, 1089, 1176
Bme18I GGWCC 1 cut(s) 1160
BmgT120I GGNCC 4 cut(s) 568, 569, 1094, 1160
BmiI GGNNCC 8 cut(s) 330, 492, 570, 571, 829, 947, 1116, 1198
BmrFI CCNGG 3 cut(s) 868, 1089, 1176
BmrI ACTGGG 3 cut(s) 190, 693, 806
BmsI GCATC 5 cut(s) 212, 548, 691, 843, 944
BmuI ACTGGG 3 cut(s) 190, 693, 806
BpiI GAAGAC 2 cut(s) 538, 686
BpmI CTGGAG 1 cut(s) 477
Bpu14I TTCGAA 1 cut(s) 268
BpuEI CTTGAG 2 cut(s) 220, 955
BsaAI YACGTR 2 cut(s) 25, 983
BsaBI GATNNNNATC 1 cut(s) 168
BsaHI GRCGYC 1 cut(s) 329
BsaJI CCNNGG 4 cut(s) 479, 1110, 1143, 1174
BsaWI WCCGGW 2 cut(s) 616, 1193
Bsc4I CCNNNNNNNGG 2 cut(s) 213, 623
Bse118I RCCGGY 1 cut(s) 616
Bse1I ACTGG 4 cut(s) 185, 494, 699, 812
Bse21I CCTNAGG 2 cut(s) 911, 1164
Bse3DI GCAATG 2 cut(s) 397, 491
Bse8I GATNNNNATC 1 cut(s) 168
BseBI CCWGG 3 cut(s) 868, 1089, 1176
BseDI CCNNGG 4 cut(s) 479, 1110, 1143, 1174
BseGI GGATG 5 cut(s) 169, 169, 203, 539, 1191
BseJI GATNNNNATC 1 cut(s) 168
BseLI CCNNNNNNNGG 2 cut(s) 213, 623
BseMI GCAATG 2 cut(s) 397, 491
BseMII CTCAG 3 cut(s) 222, 902, 1155
BseNI ACTGG 4 cut(s) 185, 494, 699, 812
BseRI GAGGAG 1 cut(s) 461
BseSI GKGCMC 2 cut(s) 360, 572
BseXI GCAGC 2 cut(s) 1015, 1061
Bsh1285I CGRYCG 1 cut(s) 617
BshFI GGCC 3 cut(s) 570, 866, 1095
BshNI GGYRCC 3 cut(s) 328, 827, 1114
BshTI ACCGGT 1 cut(s) 616
BsiEI CGRYCG 1 cut(s) 617
BsiSI CCGG 2 cut(s) 617, 1194
BslI CCNNNNNNNGG 2 cut(s) 213, 623
BsmAI GTCTC 1 cut(s) 718
BsnI GGCC 3 cut(s) 570, 866, 1095
Bsp119I TTCGAA 1 cut(s) 268
Bsp120I GGGCCC 1 cut(s) 568
Bsp1286I GDGCHC 4 cut(s) 360, 493, 572, 738
Bsp143I GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
BspACI CCGC 1 cut(s) 526
BspANI GGCC 3 cut(s) 570, 866, 1095
BspCNI CTCAG 3 cut(s) 221, 903, 1156
BspLI GGNNCC 8 cut(s) 330, 492, 570, 571, 829, 947, 1116, 1198
BspMAI CTGCAG 1 cut(s) 69
BspPI GGATC 2 cut(s) 940, 953
BspT104I TTCGAA 1 cut(s) 268
BspT107I GGYRCC 3 cut(s) 328, 827, 1114
BsrDI GCAATG 2 cut(s) 397, 491
BsrFI RCCGGY 1 cut(s) 616
BsrI ACTGG 4 cut(s) 185, 494, 699, 812
BssAI RCCGGY 1 cut(s) 616
BssECI CCNNGG 4 cut(s) 479, 1110, 1143, 1174
BssMI GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
BssNI GRCGYC 1 cut(s) 329
BssT1I CCWWGG 2 cut(s) 1110, 1143
Bst2UI CCWGG 3 cut(s) 868, 1089, 1176
Bst4CI ACNGT 2 cut(s) 819, 931
Bst6I CTCTTC 1 cut(s) 87
BstACI GRCGYC 1 cut(s) 329
BstBAI YACGTR 2 cut(s) 25, 983
BstBI TTCGAA 1 cut(s) 268
BstC8I GCNNGC 1 cut(s) 832
BstDEI CTNAG 8 cut(s) 208, 401, 425, 463, 521, 911, 1022, 1164
BstDSI CCRYGG 1 cut(s) 479
BstEII GGTNACC 2 cut(s) 656, 1189
BstENI CCTNNNNNAGG 1 cut(s) 211
BstF5I GGATG 5 cut(s) 169, 169, 203, 539, 1191
BstH2I RGCGCY 1 cut(s) 332
BstHHI GCGC 2 cut(s) 331, 1033
BstKTI GATC 6 cut(s) 145, 508, 724, 948, 956, 1011
BstMAI GTCTC 1 cut(s) 718
BstMBI GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
BstMCI CGRYCG 1 cut(s) 617
BstNI CCWGG 3 cut(s) 868, 1089, 1176
BstNSI RCATGY 2 cut(s) 539, 800
BstPI GGTNACC 2 cut(s) 656, 1189
BstSCI CCNGG 3 cut(s) 866, 1087, 1174
BstSFI CTRYAG 2 cut(s) 65, 927
BstSLI GKGCMC 2 cut(s) 360, 572
BstV1I GCAGC 2 cut(s) 1015, 1061
BstV2I GAAGAC 2 cut(s) 538, 686
BstX2I RGATCY 1 cut(s) 945
BstXI CCANNNNNNTGG 2 cut(s) 486, 1182
BstYI RGATCY 1 cut(s) 945
Bsu36I CCTNAGG 2 cut(s) 911, 1164
BsuI GTATCC 1 cut(s) 1095
BsuRI GGCC 3 cut(s) 570, 866, 1095
BtgI CCRYGG 1 cut(s) 479
BtsCI GGATG 5 cut(s) 169, 169, 203, 539, 1191
BtsI GCAGTG 2 cut(s) 804, 1086
BtsIMutI CAGTG 3 cut(s) 178, 804, 1086
Cac8I GCNNGC 1 cut(s) 832
CfoI GCGC 2 cut(s) 331, 1033
Cfr10I RCCGGY 1 cut(s) 616
Cfr13I GGNCC 4 cut(s) 568, 569, 1094, 1160
Csp6I GTAC 3 cut(s) 421, 637, 815
CspAI ACCGGT 1 cut(s) 616
CviAII CATG 3 cut(s) 407, 536, 797
CviQI GTAC 3 cut(s) 421, 637, 815
DdeI CTNAG 8 cut(s) 208, 401, 425, 463, 521, 911, 1022, 1164
DinI GGCGCC 1 cut(s) 330
DpnI GATC 6 cut(s) 144, 507, 723, 947, 955, 1010
DpnII GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
Eam1104I CTCTTC 1 cut(s) 87
EarI CTCTTC 1 cut(s) 87
EciI GGCGGA 1 cut(s) 541
Eco130I CCWWGG 2 cut(s) 1110, 1143
Eco147I AGGCCT 1 cut(s) 866
Eco24I GRGCYC 3 cut(s) 493, 572, 738
Eco47I GGWCC 1 cut(s) 1160
Eco57I CTGAAG 3 cut(s) 111, 536, 662
Eco81I CCTNAGG 2 cut(s) 911, 1164
Eco91I GGTNACC 2 cut(s) 656, 1189
EcoNI CCTNNNNNAGG 1 cut(s) 211
EcoO109I RGGNCCY 2 cut(s) 569, 1160
EcoO65I GGTNACC 2 cut(s) 656, 1189
EcoRI GAATTC 1 cut(s) 1072
EcoRII CCWGG 3 cut(s) 866, 1087, 1174
EcoT14I CCWWGG 2 cut(s) 1110, 1143
EcoT22I ATGCAT 1 cut(s) 541
EcoT38I GRGCYC 3 cut(s) 493, 572, 738
EgeI GGCGCC 1 cut(s) 330
EheI GGCGCC 1 cut(s) 330
ErhI CCWWGG 2 cut(s) 1110, 1143
FaeI CATG 3 cut(s) 410, 539, 800
FatI CATG 3 cut(s) 406, 535, 796
FauNDI CATATG 1 cut(s) 663
FbaI TGATCA 2 cut(s) 721, 1008
Fnu4HI GCNGC 2 cut(s) 1029, 1050
FokI GGATG 5 cut(s) 156, 176, 190, 526, 1198
FriOI GRGCYC 3 cut(s) 493, 572, 738
Fsp4HI GCNGC 2 cut(s) 1029, 1050
GlaI GCGC 2 cut(s) 330, 1032
GluI GCNGC 2 cut(s) 1029, 1050
GsuI CTGGAG 1 cut(s) 477
HaeII RGCGCY 1 cut(s) 332
HaeIII GGCC 3 cut(s) 570, 866, 1095
HapII CCGG 2 cut(s) 617, 1194
HhaI GCGC 2 cut(s) 331, 1033
Hin1I GRCGYC 1 cut(s) 329
Hin1II CATG 3 cut(s) 410, 539, 800
Hin6I GCGC 2 cut(s) 329, 1031
HinP1I GCGC 2 cut(s) 329, 1031
HincII GTYRAC 1 cut(s) 586
HindII GTYRAC 1 cut(s) 586
HindIII AAGCTT 1 cut(s) 1202
HinfI GANTC 6 cut(s) 119, 602, 627, 691, 842, 993
HpaI GTTAAC 1 cut(s) 586
HpaII CCGG 2 cut(s) 617, 1194
HphI GGTGA 1 cut(s) 668
Hpy166II GTNNAC 3 cut(s) 22, 178, 586
Hpy188I TCNGA 4 cut(s) 106, 192, 950, 958
Hpy188III TCNNGA 3 cut(s) 910, 990, 1163
Hpy8I GTNNAC 3 cut(s) 22, 178, 586
Hpy99I CGWCG 1 cut(s) 1132
HpyAV CCTTC 6 cut(s) 264, 589, 638, 715, 959, 1116
HpyCH4III ACNGT 2 cut(s) 819, 931
HpyCH4IV ACGT 4 cut(s) 24, 582, 982, 1130
HpyCH4V TGCA 8 cut(s) 67, 113, 410, 539, 804, 834, 935, 941
HpyF3I CTNAG 8 cut(s) 208, 401, 425, 463, 521, 911, 1022, 1164
HpySE526I ACGT 4 cut(s) 24, 582, 982, 1130
Hsp92I GRCGYC 1 cut(s) 329
Hsp92II CATG 3 cut(s) 410, 539, 800
HspAI GCGC 2 cut(s) 329, 1031
KasI GGCGCC 1 cut(s) 328
Ksp22I TGATCA 2 cut(s) 721, 1008
KspAI GTTAAC 1 cut(s) 586
Kzo9I GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
LmnI GCTCC 4 cut(s) 448, 496, 783, 1196
Lsp1109I GCAGC 2 cut(s) 1015, 1061
LweI GCATC 5 cut(s) 212, 548, 691, 843, 944
MaeII ACGT 4 cut(s) 24, 582, 982, 1130
MaeIII GTNAC 7 cut(s) 33, 226, 253, 619, 656, 856, 1189
MalI GATC 6 cut(s) 144, 507, 723, 947, 955, 1010
MboI GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
MboII GAAGA 6 cut(s) 104, 114, 543, 668, 686, 963
MflI RGATCY 1 cut(s) 945
MhlI GDGCHC 4 cut(s) 360, 493, 572, 738
MluCI AATT 7 cut(s) 71, 83, 458, 467, 473, 727, 1072
Mly113I GGCGCC 1 cut(s) 329
MlyI GAGTC 2 cut(s) 700, 836
Mph1103I ATGCAT 1 cut(s) 541
MseI TTAA 2 cut(s) 77, 585
MslI CAYNNNNRTG 4 cut(s) 344, 484, 729, 799
MspI CCGG 2 cut(s) 617, 1194
MspR9I CCNGG 3 cut(s) 868, 1089, 1176
MvaI CCWGG 3 cut(s) 868, 1089, 1176
NarI GGCGCC 1 cut(s) 329
NdeI CATATG 1 cut(s) 663
NdeII GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
NlaIII CATG 3 cut(s) 410, 539, 800
NlaIV GGNNCC 8 cut(s) 330, 492, 570, 571, 829, 947, 1116, 1198
NmuCI GTSAC 3 cut(s) 226, 656, 856
NsiI ATGCAT 1 cut(s) 541
NspI RCATGY 2 cut(s) 539, 800
NspV TTCGAA 1 cut(s) 268
PceI AGGCCT 1 cut(s) 866
PciI ACATGT 1 cut(s) 796
PfeI GAWTC 4 cut(s) 119, 602, 627, 993
PinAI ACCGGT 1 cut(s) 616
PkrI GCNGC 2 cut(s) 1030, 1051
PleI GAGTC 2 cut(s) 699, 836
PluTI GGCGCC 1 cut(s) 332
PpsI GAGTC 2 cut(s) 699, 836
Ppu21I YACGTR 2 cut(s) 25, 983
PpuMI RGGWCCY 1 cut(s) 1160
PscI ACATGT 1 cut(s) 796
Psp5II RGGWCCY 1 cut(s) 1160
Psp6I CCWGG 3 cut(s) 866, 1087, 1174
PspEI GGTNACC 2 cut(s) 656, 1189
PspGI CCWGG 3 cut(s) 866, 1087, 1174
PspN4I GGNNCC 8 cut(s) 330, 492, 570, 571, 829, 947, 1116, 1198
PspOMI GGGCCC 1 cut(s) 568
PspPI GGNCC 4 cut(s) 568, 569, 1094, 1160
PspPPI RGGWCCY 1 cut(s) 1160
PstI CTGCAG 1 cut(s) 69
PsuI RGATCY 1 cut(s) 945
RsaI GTAC 3 cut(s) 422, 638, 816
RsaNI GTAC 3 cut(s) 421, 637, 815
RseI CAYNNNNRTG 4 cut(s) 344, 484, 729, 799
SaqAI TTAA 2 cut(s) 77, 585
SatI GCNGC 2 cut(s) 1029, 1050
Sau3AI GATC 6 cut(s) 142, 505, 721, 945, 953, 1008
Sau96I GGNCC 4 cut(s) 568, 569, 1094, 1160
SchI GAGTC 2 cut(s) 700, 836
ScrFI CCNGG 3 cut(s) 868, 1089, 1176
SduI GDGCHC 4 cut(s) 360, 493, 572, 738
SfaNI GCATC 5 cut(s) 212, 548, 691, 843, 944
SfcI CTRYAG 2 cut(s) 65, 927
SfoI GGCGCC 1 cut(s) 330
SfuI TTCGAA 1 cut(s) 268
SinI GGWCC 1 cut(s) 1160
SmiMI CAYNNNNRTG 4 cut(s) 344, 484, 729, 799
SmlI CTYRAG 2 cut(s) 235, 970
SmoI CTYRAG 2 cut(s) 235, 970
Sse9I AATT 7 cut(s) 71, 83, 458, 467, 473, 727, 1072
SseBI AGGCCT 1 cut(s) 866
SsiI CCGC 1 cut(s) 526
SspDI GGCGCC 1 cut(s) 328
StuI AGGCCT 1 cut(s) 866
StyD4I CCNGG 3 cut(s) 866, 1087, 1174
StyI CCWWGG 2 cut(s) 1110, 1143
TaaI ACNGT 2 cut(s) 819, 931
TaiI ACGT 4 cut(s) 27, 585, 985, 1133
TaqI TCGA 3 cut(s) 268, 314, 613
TasI AATT 7 cut(s) 71, 83, 458, 467, 473, 727, 1072
TatI WGTACW 1 cut(s) 814
TfiI GAWTC 4 cut(s) 119, 602, 627, 993
Tru1I TTAA 2 cut(s) 77, 585
Tru9I TTAA 2 cut(s) 77, 585
TscAI CASTG 3 cut(s) 185, 811, 1086
TseFI GTSAC 3 cut(s) 226, 656, 856
TseI GCWGC 2 cut(s) 1028, 1049
Tsp45I GTSAC 3 cut(s) 226, 656, 856
TspDTI ATGAA 3 cut(s) 132, 608, 985
TspGWI ACGGA 2 cut(s) 595, 620
TspRI CASTG 3 cut(s) 185, 811, 1086
VpaK11BI GGWCC 1 cut(s) 1160
XagI CCTNNNNNAGG 1 cut(s) 211
XapI RAATTY 2 cut(s) 467, 1072
XceI RCATGY 2 cut(s) 539, 800
Zsp2I ATGCAT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.