Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010968

Physical Location & Seq

Genomic Coordinates Forward (+)

5867996 .. 5872118

Gene Structure 4123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG077800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGCCCTCAGCGTGTACCAGCGCGACCCGCAGTCGGCGGCCAAGAAGGCCGTCGCGGCAGTCGGGTCGGGTTACGATTTCTGCAACGATCTCCGGTTCACTTCGTGCAAGTCCGTACTGATCGAGTTGGATCCGACCCGGACCCGGGACCTCGTCATCCCCGGCGGCCCCGTCGTGCCTGACGTGTCCACCTCCATCAAGTGCGATAAGGGCGAGCGCACCAAGTTCCGCTCCGACGTCGTTTCGTTCAATCAGATGTCAGAGCAGTACAATAAGGAACTTTCTTTATCGGGGAAAATTCCGTCCGGCTTGTTTAATGCTATGTTTAACTACACCAGCTGCTGGCAGAAGGATGCAGCGCCCACGAAATGTCTTGCCTTTGACGGTTGGTTGATAACTCTGTATAACATTGAGTTAGCGAGATCCCAATTGACCCTATTGGAGCAAGTGAAACAAGACGTGCCTTCTGTTTGGGACCCTGCTGGCCTTGCCGCGTTCATTGAAAAGTATGGTACTCACATTGTTGTTGGGGTGAAGATGGGTGGAAAGGATATAGTTCACGTAAAGCAGTTACAAAACTCAAAACTTGACCCTGCTGAACTGCAGAAATTGTTAAAGCAATTAGCTGAAGAGAGATTTTCTGATAATGCAAATGAATCTTCTATATCAAATACTGCTGATCTATTAGGAAAAATGAGGGATGACCATCCTGTTCACTGGGATATTCAGAGAACATTAGCATCCTCAGTAAGGCAACCCATCGTCACTCACTCAAGGAATGATGATATTGTTACCATTAGTGTTCGAAGGGGAGGTGTTGATGTTGGTCAAAGTCATAACCAATGGCTTTCGACTATATCACAGGCGCCTGATGTCATATCAATGTCCTTTGTGCCCATAACATCACTTTTGGGTGGTGTTCAAGGCAATGGATTTCTTAGCCATGCAGTAAATCTGTACCTTAGATACAAACCACCAATAGAGGAGCTTCAACAATTCTTAGAATTTCAATTACCACGGCAATGGGCTCCAGTATATGCTGATCTGCCTCTTGGTCTAAGGCGGAGAAGACATGCATCCCCATCACTTCAGTTCAGTTTTATGGGCCCCAAGCTATACGTTAACACTATGAAGGTTGATTCCGTAAATCGACCGGTTACAGGAATCCGTTTGTACCTTGAAGGTAAAAAAGGTGACCATATGGCAATCCATCTTCAGCATCTTACGAGTCTTCCCAGTTCCTTCCAAGTCTCAACTGATCACAATTATGAGCCCATTGACGAGCCAGAGGAACGAGGCTACTTTGAACCTGTCAAGTGGAGCATATTTTCACATGTATGCACTGCCCCAGTACAGTATAATGGTGCCTGCATCAATGACTCTGCTTCTATTGTGACAAAGGCCTGGTTTGAAGTCAAGGCTATTGGAATGAGGAAAGTTTTGTTCCTGAGGCTTGGATTTTCTACTGTGGCATCTGCAAGGATCCGAAGATCAGAATGGGAAGGCTCAAGCTCATCACGTAAGTCAGGATTCATCTCAACCTTGATCAGCACAAGGCTTAGTGCTGCGCTTAATCCACCTGTGGCAGCACCACCAAAAGTGGATTTGAATTCAGCAGTGTATCCTGGTGGCCCACCTTTACCTTCCAAGGCACCAAAAATGGCGACGTTTGTAGATACCAAGGAAATGTTGAGAGGTCCTGAGGACACCCCAGGATATTGGATGGTTACCGGAGCCAAGCTTTGTGTAGAGGGTGGTAGAATCTCAGTCAAAGTGAAGTATTCATTGCTGACAATTATGTTGGAAGACTCGATGATGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0008150 GO:0008219 GO:0009626 GO:0009628 GO:0009651 GO:0009987 GO:0010337 GO:0010565 GO:0010817 GO:0012501 GO:0019222 GO:0031323 GO:0032350 GO:0033036 GO:0033037 GO:0033554 GO:0034050 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051716 GO:0052542 GO:0052545 GO:0062012 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MACPF

Protein Analysis

607

Amino Acids

67.33

Weight (kDa)

8.87

Isoelectric Point (pI)

49.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MACPF	PF01823	104 - 320	1.5e-35	MAC/Perforin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28380
fragaria_vesca	FvH4_3g08740
malus_domestica	MD05G1311300.v1.1 MD10G1290300.v1.1
prunus_persica	Prupe.4G051500_v2.0.a1
pyrus_communis	pycom05g28740 pycom10g24250 pycom10g24280
rosa_chinensis	RchiOBHm_Chr5g0009001
rosa_laevigata	RLG00000031624
rosa_multiflora	Rmu_sc0021361.1_g000001
rosa_roxburghii	Rroxscaffold_1G00067010 Rroxscaffold_1G00067650
rosa_rugosa	Rorug04G0440800 Rorug04G0440900
rosa_samantha	Rh5AG069800 Rh5BG066500 Rh5CG077800 Rh5DG065800
rosa_wichuraiana	Rw5G006510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	240
AccB1I	GGYRCC	3 cut(s)	865, 1364, 1651
AccB7I	CCANNNNNTGG	1 cut(s)	342
AccBSI	CCGCTC	1 cut(s)	231
AccII	CGCG	3 cut(s)	24, 56, 494
AciI	CCGC	7 cut(s)	29, 38, 56, 165, 229, 492, 1063
AclWI	GGATC	5 cut(s)	125, 138, 417, 1477, 1490
AcoI	YGGCCR	1 cut(s)	39
AcsI	RAATTY	3 cut(s)	297, 1004, 1609
AcuI	CTGAAG	3 cut(s)	648, 1073, 1199
AcyI	GRCGYC	2 cut(s)	237, 866
AdeI	CACNNNGTG	1 cut(s)	105
AfaI	GTAC	7 cut(s)	17, 117, 269, 514, 959, 1175, 1353
AfiI	CCNNNNNNNGG	6 cut(s)	34, 144, 145, 342, 750, 1160
AflIII	ACRYGT	2 cut(s)	183, 1333
AgeI	ACCGGT	1 cut(s)	1153
AgsI	TTSAA	9 cut(s)	250, 503, 923, 992, 1010, 1181, 1307, 1412, 1609
AhdI	GACNNNNNGTC	1 cut(s)	31
AjiI	CACGTC	2 cut(s)	184, 460
AjnI	CCWGG	3 cut(s)	1403, 1624, 1711
AluBI	AGCT	6 cut(s)	339, 626, 988, 1114, 1512, 1741
AluI	AGCT	6 cut(s)	339, 626, 988, 1114, 1512, 1741
Alw26I	GTCTC	1 cut(s)	1255
AlwI	GGATC	5 cut(s)	125, 138, 417, 1477, 1490
AlwNI	CAGNNNCTG	1 cut(s)	342
Ama87I	CYCGRG	1 cut(s)	144
AoxI	GGCC	8 cut(s)	3, 39, 48, 166, 484, 1105, 1401, 1630
ApaI	GGGCCC	1 cut(s)	1109
ApeKI	GCWGC	4 cut(s)	339, 356, 1565, 1586
ApoI	RAATTY	3 cut(s)	297, 1004, 1609
AsiGI	ACCGGT	1 cut(s)	1153
AspLEI	GCGC	5 cut(s)	24, 219, 361, 868, 1570
AspS9I	GGNCC	9 cut(s)	4, 141, 148, 167, 475, 1105, 1106, 1631, 1697
AsuC2I	CCSGG	4 cut(s)	139, 145, 146, 162
AsuHPI	GGTGA	2 cut(s)	544, 1205
AsuII	TTCGAA	1 cut(s)	805
AvaI	CYCGRG	1 cut(s)	144
AvaII	GGWCC	4 cut(s)	141, 148, 475, 1697
AxyI	CCTNAGG	2 cut(s)	1448, 1701
BaeGI	GKGCMC	2 cut(s)	897, 1109
BamHI	GGATCC	2 cut(s)	130, 1482
BanI	GGYRCC	3 cut(s)	865, 1364, 1651
BanII	GRGCYC	3 cut(s)	1030, 1109, 1275
BbsI	GAAGAC	3 cut(s)	1075, 1223, 1812
BbvCI	CCTCAGC	1 cut(s)	8
BbvI	GCAGC	4 cut(s)	326, 368, 1552, 1598
BccI	CCATC	7 cut(s)	203, 532, 714, 767, 1090, 1218, 1717
BceAI	ACGGC	2 cut(s)	35, 1034
BcgI	CGANNNNNNTGC	2 cut(s)	48, 82
BciT130I	CCWGG	3 cut(s)	1405, 1626, 1713
BciVI	GTATCC	1 cut(s)	1632
BclI	TGATCA	2 cut(s)	1258, 1545
BcnI	CCSGG	4 cut(s)	139, 145, 146, 162
BcoDI	GTCTC	1 cut(s)	1255
BfmI	CTRYAG	1 cut(s)	602
BfoI	RGCGCY	2 cut(s)	362, 869
BfuI	GTATCC	1 cut(s)	1632
BglI	GCCNNNNNGGC	2 cut(s)	47, 56
BisI	GCNGC	8 cut(s)	39, 57, 166, 340, 357, 492, 1566, 1587
BlsI	GCNGC	8 cut(s)	40, 58, 167, 341, 358, 493, 1567, 1588
Bme1390I	CCNGG	7 cut(s)	139, 145, 146, 162, 1405, 1626, 1713
Bme18I	GGWCC	4 cut(s)	141, 148, 475, 1697
BmeRI	GACNNNNNGTC	1 cut(s)	31
BmeT110I	CYCGRG	1 cut(s)	144
BmgBI	CACGTC	2 cut(s)	184, 460
BmgT120I	GGNCC	9 cut(s)	4, 141, 148, 167, 475, 1105, 1106, 1631, 1697
BmrFI	CCNGG	7 cut(s)	139, 145, 146, 162, 1405, 1626, 1713
BmrI	ACTGGG	3 cut(s)	727, 1230, 1343
BmsI	GCATC	6 cut(s)	343, 749, 1085, 1228, 1380, 1481
BmuI	ACTGGG	3 cut(s)	727, 1230, 1343
BpiI	GAAGAC	3 cut(s)	1075, 1223, 1812
BpmI	CTGGAG	1 cut(s)	1014
Bpu10I	CCTNAGC	1 cut(s)	8
Bpu14I	TTCGAA	1 cut(s)	805
BpuEI	CTTGAG	2 cut(s)	757, 1492
BpuMI	CCSGG	4 cut(s)	139, 145, 146, 162
BsaAI	YACGTR	2 cut(s)	562, 1520
BsaBI	GATNNNNATC	1 cut(s)	705
BsaHI	GRCGYC	2 cut(s)	237, 866
BsaJI	CCNNGG	6 cut(s)	144, 160, 1016, 1647, 1680, 1711
BsaWI	WCCGGW	3 cut(s)	93, 1153, 1730
Bsc4I	CCNNNNNNNGG	6 cut(s)	34, 144, 145, 342, 750, 1160
Bse118I	RCCGGY	1 cut(s)	1153
Bse1I	ACTGG	4 cut(s)	722, 1031, 1236, 1349
Bse21I	CCTNAGG	2 cut(s)	1448, 1701
Bse3DI	GCAATG	3 cut(s)	934, 1028, 1784
Bse8I	GATNNNNATC	1 cut(s)	705
BseBI	CCWGG	3 cut(s)	1405, 1626, 1713
BseDI	CCNNGG	6 cut(s)	144, 160, 1016, 1647, 1680, 1711
BseGI	GGATG	7 cut(s)	156, 358, 706, 706, 740, 1076, 1728
BseJI	GATNNNNATC	1 cut(s)	705
BseLI	CCNNNNNNNGG	6 cut(s)	34, 144, 145, 342, 750, 1160
BseMI	GCAATG	3 cut(s)	934, 1028, 1784
BseMII	CTCAG	5 cut(s)	22, 759, 1439, 1692, 1779
BseNI	ACTGG	4 cut(s)	722, 1031, 1236, 1349
BseRI	GAGGAG	1 cut(s)	998
BseSI	GKGCMC	2 cut(s)	897, 1109
BseXI	GCAGC	4 cut(s)	326, 368, 1552, 1598
Bsh1236I	CGCG	3 cut(s)	24, 56, 494
Bsh1285I	CGRYCG	1 cut(s)	1154
BshFI	GGCC	8 cut(s)	5, 41, 50, 168, 486, 1107, 1403, 1632
BshNI	GGYRCC	3 cut(s)	865, 1364, 1651
BshTI	ACCGGT	1 cut(s)	1153
BsiEI	CGRYCG	1 cut(s)	1154
BsiHKCI	CYCGRG	1 cut(s)	144
BsiSI	CCGG	7 cut(s)	94, 139, 145, 162, 306, 1154, 1731
BslFI	GGGAC	2 cut(s)	161, 488
BslI	CCNNNNNNNGG	6 cut(s)	34, 144, 145, 342, 750, 1160
BsmAI	GTCTC	1 cut(s)	1255
BsmFI	GGGAC	2 cut(s)	161, 488
BsnI	GGCC	8 cut(s)	5, 41, 50, 168, 486, 1107, 1403, 1632
BsoBI	CYCGRG	1 cut(s)	144
Bsp119I	TTCGAA	1 cut(s)	805
Bsp120I	GGGCCC	1 cut(s)	1105
Bsp1286I	GDGCHC	4 cut(s)	897, 1030, 1109, 1275
BspACI	CCGC	7 cut(s)	29, 38, 56, 165, 229, 492, 1063
BspANI	GGCC	8 cut(s)	5, 41, 50, 168, 486, 1107, 1403, 1632
BspCNI	CTCAG	5 cut(s)	21, 758, 1440, 1693, 1778
BspFNI	CGCG	3 cut(s)	24, 56, 494
BspMAI	CTGCAG	1 cut(s)	606
BspPI	GGATC	5 cut(s)	125, 138, 417, 1477, 1490
BspT104I	TTCGAA	1 cut(s)	805
BspT107I	GGYRCC	3 cut(s)	865, 1364, 1651
BsrBI	CCGCTC	1 cut(s)	231
BsrDI	GCAATG	3 cut(s)	934, 1028, 1784
BsrFI	RCCGGY	1 cut(s)	1153
BsrI	ACTGG	4 cut(s)	722, 1031, 1236, 1349
BssAI	RCCGGY	1 cut(s)	1153
BssECI	CCNNGG	6 cut(s)	144, 160, 1016, 1647, 1680, 1711
BssNI	GRCGYC	2 cut(s)	237, 866
BssT1I	CCWWGG	2 cut(s)	1647, 1680
Bst2UI	CCWGG	3 cut(s)	1405, 1626, 1713
Bst4CI	ACNGT	3 cut(s)	386, 1356, 1468
Bst6I	CTCTTC	1 cut(s)	624
BstACI	GRCGYC	2 cut(s)	237, 866
BstBAI	YACGTR	2 cut(s)	562, 1520
BstBI	TTCGAA	1 cut(s)	805
BstC8I	GCNNGC	4 cut(s)	215, 344, 484, 1369
BstDSI	CCRYGG	1 cut(s)	1016
BstEII	GGTNACC	2 cut(s)	1193, 1726
BstENI	CCTNNNNNAGG	1 cut(s)	748
BstF5I	GGATG	7 cut(s)	156, 358, 706, 706, 740, 1076, 1728
BstFNI	CGCG	3 cut(s)	24, 56, 494
BstH2I	RGCGCY	2 cut(s)	362, 869
BstHHI	GCGC	5 cut(s)	24, 219, 361, 868, 1570
BstMAI	GTCTC	1 cut(s)	1255
BstMCI	CGRYCG	1 cut(s)	1154
BstMWI	GCNNNNNNNGC	5 cut(s)	28, 47, 56, 210, 488
BstNI	CCWGG	3 cut(s)	1405, 1626, 1713
BstNSI	RCATGY	2 cut(s)	1076, 1337
BstPI	GGTNACC	2 cut(s)	1193, 1726
BstSCI	CCNGG	7 cut(s)	137, 143, 144, 160, 1403, 1624, 1711
BstSFI	CTRYAG	1 cut(s)	602
BstSLI	GKGCMC	2 cut(s)	897, 1109
BstUI	CGCG	3 cut(s)	24, 56, 494
BstV1I	GCAGC	4 cut(s)	326, 368, 1552, 1598
BstV2I	GAAGAC	3 cut(s)	1075, 1223, 1812
BstX2I	RGATCY	3 cut(s)	130, 422, 1482
BstXI	CCANNNNNNTGG	2 cut(s)	1023, 1719
BstYI	RGATCY	3 cut(s)	130, 422, 1482
Bsu36I	CCTNAGG	2 cut(s)	1448, 1701
BsuI	GTATCC	1 cut(s)	1632
BsuRI	GGCC	8 cut(s)	5, 41, 50, 168, 486, 1107, 1403, 1632
BtgI	CCRYGG	1 cut(s)	1016
BtrI	CACGTC	2 cut(s)	184, 460
BtsCI	GGATG	7 cut(s)	156, 358, 706, 706, 740, 1076, 1728
BtsI	GCAGTG	2 cut(s)	1341, 1623
BtsIMutI	CAGTG	3 cut(s)	715, 1341, 1623
Cac8I	GCNNGC	4 cut(s)	215, 344, 484, 1369
CaiI	CAGNNNCTG	1 cut(s)	342
CfoI	GCGC	5 cut(s)	24, 219, 361, 868, 1570
Cfr10I	RCCGGY	1 cut(s)	1153
Cfr13I	GGNCC	9 cut(s)	4, 141, 148, 167, 475, 1105, 1106, 1631, 1697
Cfr9I	CCCGGG	1 cut(s)	144
Csp6I	GTAC	7 cut(s)	16, 116, 268, 513, 958, 1174, 1352
CspAI	ACCGGT	1 cut(s)	1153
CviAII	CATG	3 cut(s)	944, 1073, 1334
CviQI	GTAC	7 cut(s)	16, 116, 268, 513, 958, 1174, 1352
DinI	GGCGCC	1 cut(s)	867
DraIII	CACNNNGTG	1 cut(s)	105
DriI	GACNNNNNGTC	1 cut(s)	31
EaeI	YGGCCR	1 cut(s)	39
Eam1104I	CTCTTC	1 cut(s)	624
Eam1105I	GACNNNNNGTC	1 cut(s)	31
EarI	CTCTTC	1 cut(s)	624
EciI	GGCGGA	1 cut(s)	1078
Eco130I	CCWWGG	2 cut(s)	1647, 1680
Eco147I	AGGCCT	1 cut(s)	1403
Eco24I	GRGCYC	3 cut(s)	1030, 1109, 1275
Eco47I	GGWCC	4 cut(s)	141, 148, 475, 1697
Eco57I	CTGAAG	3 cut(s)	648, 1073, 1199
Eco81I	CCTNAGG	2 cut(s)	1448, 1701
Eco88I	CYCGRG	1 cut(s)	144
Eco91I	GGTNACC	2 cut(s)	1193, 1726
EcoNI	CCTNNNNNAGG	1 cut(s)	748
EcoO109I	RGGNCCY	4 cut(s)	148, 475, 1106, 1697
EcoO65I	GGTNACC	2 cut(s)	1193, 1726
EcoRI	GAATTC	1 cut(s)	1609
EcoRII	CCWGG	3 cut(s)	1403, 1624, 1711
EcoT14I	CCWWGG	2 cut(s)	1647, 1680
EcoT22I	ATGCAT	1 cut(s)	1078
EcoT38I	GRGCYC	3 cut(s)	1030, 1109, 1275
EgeI	GGCGCC	1 cut(s)	867
EheI	GGCGCC	1 cut(s)	867
ErhI	CCWWGG	2 cut(s)	1647, 1680
FaeI	CATG	3 cut(s)	947, 1076, 1337
FaqI	GGGAC	2 cut(s)	161, 488
FatI	CATG	3 cut(s)	943, 1072, 1333
FauI	CCCGC	1 cut(s)	36
FauNDI	CATATG	1 cut(s)	1200
FbaI	TGATCA	2 cut(s)	1258, 1545
Fnu4HI	GCNGC	8 cut(s)	39, 57, 166, 340, 357, 492, 1566, 1587
FokI	GGATG	7 cut(s)	143, 365, 693, 713, 727, 1063, 1735
FriOI	GRGCYC	3 cut(s)	1030, 1109, 1275
Fsp4HI	GCNGC	8 cut(s)	39, 57, 166, 340, 357, 492, 1566, 1587
GlaI	GCGC	5 cut(s)	23, 218, 360, 867, 1569
GluI	GCNGC	8 cut(s)	39, 57, 166, 340, 357, 492, 1566, 1587
GsuI	CTGGAG	1 cut(s)	1014
HaeII	RGCGCY	2 cut(s)	362, 869
HaeIII	GGCC	8 cut(s)	5, 41, 50, 168, 486, 1107, 1403, 1632
HapII	CCGG	7 cut(s)	94, 139, 145, 162, 306, 1154, 1731
HhaI	GCGC	5 cut(s)	24, 219, 361, 868, 1570
Hin1I	GRCGYC	2 cut(s)	237, 866
Hin1II	CATG	3 cut(s)	947, 1076, 1337
Hin6I	GCGC	5 cut(s)	22, 217, 359, 866, 1568
HinP1I	GCGC	5 cut(s)	22, 217, 359, 866, 1568
HincII	GTYRAC	1 cut(s)	1123
HindII	GTYRAC	1 cut(s)	1123
HindIII	AAGCTT	1 cut(s)	1739
HinfI	GANTC	8 cut(s)	656, 1139, 1164, 1228, 1379, 1530, 1761, 1808
HpaI	GTTAAC	1 cut(s)	1123
HpaII	CCGG	7 cut(s)	94, 139, 145, 162, 306, 1154, 1731
HphI	GGTGA	2 cut(s)	544, 1205
Hpy166II	GTNNAC	6 cut(s)	16, 99, 189, 559, 715, 1123
Hpy188I	TCNGA	8 cut(s)	135, 235, 255, 262, 643, 729, 1487, 1495
Hpy188III	TCNNGA	3 cut(s)	1447, 1527, 1700
Hpy8I	GTNNAC	6 cut(s)	16, 99, 189, 559, 715, 1123
Hpy99I	CGWCG	5 cut(s)	56, 176, 239, 242, 1669
HpyAV	CCTTC	9 cut(s)	40, 343, 474, 801, 1126, 1175, 1252, 1496, 1653
HpyCH4III	ACNGT	3 cut(s)	386, 1356, 1468
HpyCH4IV	ACGT	7 cut(s)	183, 237, 459, 561, 1119, 1519, 1667
HpyF10VI	GCNNNNNNNGC	5 cut(s)	28, 47, 56, 210, 488
HpySE526I	ACGT	7 cut(s)	183, 237, 459, 561, 1119, 1519, 1667
Hsp92I	GRCGYC	2 cut(s)	237, 866
Hsp92II	CATG	3 cut(s)	947, 1076, 1337
HspAI	GCGC	5 cut(s)	22, 217, 359, 866, 1568
KasI	GGCGCC	1 cut(s)	865
KflI	GGGWCCC	1 cut(s)	475
Ksp22I	TGATCA	2 cut(s)	1258, 1545
KspAI	GTTAAC	1 cut(s)	1123
LmnI	GCTCC	6 cut(s)	236, 442, 985, 1033, 1320, 1733
Lsp1109I	GCAGC	4 cut(s)	326, 368, 1552, 1598
LweI	GCATC	6 cut(s)	343, 749, 1085, 1228, 1380, 1481
MaeII	ACGT	7 cut(s)	183, 237, 459, 561, 1119, 1519, 1667
MaeIII	GTNAC	8 cut(s)	71, 570, 763, 790, 1156, 1193, 1393, 1726
MbiI	CCGCTC	1 cut(s)	231
MboII	GAAGA	8 cut(s)	547, 641, 651, 1080, 1205, 1223, 1500, 1817
MfeI	CAATTG	1 cut(s)	428
MflI	RGATCY	3 cut(s)	130, 422, 1482
MhlI	GDGCHC	4 cut(s)	897, 1030, 1109, 1275
Mly113I	GGCGCC	1 cut(s)	866
MlyI	GAGTC	3 cut(s)	1237, 1373, 1802
MmeI	TCCRAC	4 cut(s)	108, 158, 258, 1782
Mph1103I	ATGCAT	1 cut(s)	1078
MseI	TTAA	5 cut(s)	315, 327, 614, 1122, 1572
MslI	CAYNNNNRTG	4 cut(s)	881, 1021, 1266, 1336
MspA1I	CMGCKG	1 cut(s)	339
MspI	CCGG	7 cut(s)	94, 139, 145, 162, 306, 1154, 1731
MspR9I	CCNGG	7 cut(s)	139, 145, 146, 162, 1405, 1626, 1713
MunI	CAATTG	1 cut(s)	428
MvaI	CCWGG	3 cut(s)	1405, 1626, 1713
MvnI	CGCG	3 cut(s)	24, 56, 494
MwoI	GCNNNNNNNGC	5 cut(s)	28, 47, 56, 210, 488
NarI	GGCGCC	1 cut(s)	866
NciI	CCSGG	4 cut(s)	139, 145, 146, 162
NdeI	CATATG	1 cut(s)	1200
NlaIII	CATG	3 cut(s)	947, 1076, 1337
NmuCI	GTSAC	3 cut(s)	763, 1193, 1393
NsiI	ATGCAT	1 cut(s)	1078
NspI	RCATGY	2 cut(s)	1076, 1337
NspV	TTCGAA	1 cut(s)	805
PceI	AGGCCT	1 cut(s)	1403
PciI	ACATGT	1 cut(s)	1333
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PfeI	GAWTC	5 cut(s)	656, 1139, 1164, 1530, 1761
PflFI	GACNNNGTC	1 cut(s)	152
PflMI	CCANNNNNTGG	1 cut(s)	342
PinAI	ACCGGT	1 cut(s)	1153
PkrI	GCNGC	8 cut(s)	40, 58, 167, 341, 358, 493, 1567, 1588
PleI	GAGTC	3 cut(s)	1236, 1373, 1802
PluTI	GGCGCC	1 cut(s)	869
PpsI	GAGTC	3 cut(s)	1236, 1373, 1802
Ppu21I	YACGTR	2 cut(s)	562, 1520
PpuMI	RGGWCCY	3 cut(s)	148, 475, 1697
PscI	ACATGT	1 cut(s)	1333
Psp5II	RGGWCCY	3 cut(s)	148, 475, 1697
Psp6I	CCWGG	3 cut(s)	1403, 1624, 1711
PspEI	GGTNACC	2 cut(s)	1193, 1726
PspGI	CCWGG	3 cut(s)	1403, 1624, 1711
PspOMI	GGGCCC	1 cut(s)	1105
PspPI	GGNCC	9 cut(s)	4, 141, 148, 167, 475, 1105, 1106, 1631, 1697
PspPPI	RGGWCCY	3 cut(s)	148, 475, 1697
PstI	CTGCAG	1 cut(s)	606
PstNI	CAGNNNCTG	1 cut(s)	342
PsuI	RGATCY	3 cut(s)	130, 422, 1482
PsyI	GACNNNGTC	1 cut(s)	152
PvuII	CAGCTG	1 cut(s)	339
RsaI	GTAC	7 cut(s)	17, 117, 269, 514, 959, 1175, 1353
RsaNI	GTAC	7 cut(s)	16, 116, 268, 513, 958, 1174, 1352
RseI	CAYNNNNRTG	4 cut(s)	881, 1021, 1266, 1336
SaqAI	TTAA	5 cut(s)	315, 327, 614, 1122, 1572
SatI	GCNGC	8 cut(s)	39, 57, 166, 340, 357, 492, 1566, 1587
Sau96I	GGNCC	9 cut(s)	4, 141, 148, 167, 475, 1105, 1106, 1631, 1697
SchI	GAGTC	3 cut(s)	1237, 1373, 1802
ScrFI	CCNGG	7 cut(s)	139, 145, 146, 162, 1405, 1626, 1713
SduI	GDGCHC	4 cut(s)	897, 1030, 1109, 1275
SfaNI	GCATC	6 cut(s)	343, 749, 1085, 1228, 1380, 1481
SfcI	CTRYAG	1 cut(s)	602
SfiI	GGCCNNNNNGGCC	1 cut(s)	47
SfoI	GGCGCC	1 cut(s)	867
SfuI	TTCGAA	1 cut(s)	805
SinI	GGWCC	4 cut(s)	141, 148, 475, 1697
SmaI	CCCGGG	1 cut(s)	146
SmiMI	CAYNNNNRTG	4 cut(s)	881, 1021, 1266, 1336
SmlI	CTYRAG	2 cut(s)	772, 1507
SmoI	CTYRAG	2 cut(s)	772, 1507
SseBI	AGGCCT	1 cut(s)	1403
SsiI	CCGC	7 cut(s)	29, 38, 56, 165, 229, 492, 1063
SspDI	GGCGCC	1 cut(s)	865
StuI	AGGCCT	1 cut(s)	1403
StyD4I	CCNGG	7 cut(s)	137, 143, 144, 160, 1403, 1624, 1711
StyI	CCWWGG	2 cut(s)	1647, 1680
TaaI	ACNGT	3 cut(s)	386, 1356, 1468
TaiI	ACGT	7 cut(s)	186, 240, 462, 564, 1122, 1522, 1670
TaqI	TCGA	5 cut(s)	123, 805, 851, 1150, 1811
TatI	WGTACW	2 cut(s)	267, 1351
TauI	GCSGC	4 cut(s)	41, 59, 168, 494
TfiI	GAWTC	5 cut(s)	656, 1139, 1164, 1530, 1761
Tru1I	TTAA	5 cut(s)	315, 327, 614, 1122, 1572
Tru9I	TTAA	5 cut(s)	315, 327, 614, 1122, 1572
TscAI	CASTG	3 cut(s)	722, 1348, 1623
TseFI	GTSAC	3 cut(s)	763, 1193, 1393
TseI	GCWGC	4 cut(s)	339, 356, 1565, 1586
Tsp45I	GTSAC	3 cut(s)	763, 1193, 1393
TspDTI	ATGAA	5 cut(s)	487, 669, 1145, 1522, 1773
TspGWI	ACGGA	4 cut(s)	103, 291, 1132, 1157
TspMI	CCCGGG	1 cut(s)	144
TspRI	CASTG	3 cut(s)	722, 1348, 1623
Tth111I	GACNNNGTC	1 cut(s)	152
Van91I	CCANNNNNTGG	1 cut(s)	342
VpaK11BI	GGWCC	4 cut(s)	141, 148, 475, 1697
XagI	CCTNNNNNAGG	1 cut(s)	748
XapI	RAATTY	3 cut(s)	297, 1004, 1609
XceI	RCATGY	2 cut(s)	1076, 1337
XmaI	CCCGGG	1 cut(s)	144
ZraI	GACGTC	1 cut(s)	238
Zsp2I	ATGCAT	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.