Rmu_sc0024672.1_g000001

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024672.1
OG0019340
Physical Location & Seq
Reverse (-)
1 .. 3941
3941 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024672.1_g000001.1.cds

Sequence Viewer

Length: 1418 bp
atgagtggcggacttcacaacaacccaaaggggctcccggttaatgacccagaaagtactagaattgaagggggagctatattgcagtctttcagcttgaagatcttctgctataatgaactgaaaaaggccaccaggaacttccgttttaaaaatattgtgggttttggtgattctaatacagtctacaagggatgtattgatgagcattcactcaaggccaccaagcctggtaccggcatagacatcgccataaagatgcctagcagaaaagagaggttccggctgcaggatcaccaggacttgttggtgacagaatttaaccgccttggacagcttattcatccaaatcttgtaaaaatgattggctactgtctagaggataacaatgggctcctggtgtatgaatttatgcctcgaggcagcttgggagtacatctacattcaagggatcctcaatcacaaccgctttcatggaaccttcgcatgaagattgcgcttagtgctgctaagggtctagcatttcttcacggtgacaaggcaaaaatgatatacggggacttcaaaccttctaatattcttcttgattcaaactatgaagccaaaatctatggttatggcttggtagaggatgatgagcttgaaggttatagaaggcttagaggccatgacactgaatgctctctggattcatcgtacgcagctcccgagtatcttacggacacacagagaggagaatatgagtacagatttgaaagcagcgatgatgatgaaatggggggagctatattgcagtctttcagcttgaagatcttctgctataatgaactgaaaaaggccaccaggaacttccgttttaaaaatattgtgggttttggtgattctaatacagtctacaagggatgtattgatgagcattcactcaaggccaccaagcctggtaccggcatagacatcgccataaagatgcctagcagaaaagagaggttccggctgcaggatcaccaggacttgttggtgacagaatttaaccgccttggacagcttattcatccaaatcttgtaaaaatgattggctactgtctagaggataacaatgggctcctggtgtatgaatttatgcctcgaggcagcttgggagtacatctacattcaagggatcctcaatcacaaccgctttcatggaaccttcgcatgaagattgcgcttagtgctgctaagggtctagcatttcttcacggtgacaaggcaaaaatgatatacggggacttcaaaccttctaatattcttcttgattcaaactatgaagccaaaatctatggttatggcttggtagaggatgatgagcttgaaggttatagaaggcttagaggccatgacactgaatgctctctggattcatcgtacgcagctcccga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

472

Amino Acids

53.39

Weight (kDa)

6.74

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019340)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0368701
rosa_laevigata RLG00000027196
rosa_multiflora Rmu_sc0001791.1_g000013 Rmu_sc0024672.1_g000001
rosa_rugosa Rorug01G0343800
rosa_samantha Rh1AG351300 Rh1BG315000
rosa_wichuraiana Rw0G021690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 2 cut(s) 417, 1125
Acc65I GGTACC 2 cut(s) 233, 941
AccB1I GGYRCC 2 cut(s) 233, 941
AccI GTMKAC 2 cut(s) 186, 894
AciI CCGC 5 cut(s) 9, 325, 467, 1033, 1175
AclWI GGATC 6 cut(s) 300, 446, 459, 1008, 1154, 1167
AcsI RAATTY 4 cut(s) 317, 407, 1025, 1115
AfaI GTAC 8 cut(s) 58, 235, 435, 698, 746, 943, 1143, 1406
AfiI CCNNNNNNNGG 4 cut(s) 236, 289, 944, 997
AjnI CCWGG 8 cut(s) 134, 229, 297, 396, 842, 937, 1005, 1104
AlwI GGATC 6 cut(s) 300, 446, 459, 1008, 1154, 1167
Ama87I CYCGRG 3 cut(s) 417, 707, 1125
AoxI GGCC 6 cut(s) 129, 219, 664, 837, 927, 1372
ApeKI GCWGC 9 cut(s) 286, 423, 506, 701, 759, 994, 1131, 1214, 1409
ApoI RAATTY 4 cut(s) 317, 407, 1025, 1115
Asp700I GAANNNNTTC 2 cut(s) 104, 812
Asp718I GGTACC 2 cut(s) 233, 941
AspLEI GCGC 2 cut(s) 499, 1207
AsuC2I CCSGG 1 cut(s) 38
AsuHPI GGTGA 8 cut(s) 182, 287, 322, 545, 890, 995, 1030, 1253
AvaI CYCGRG 3 cut(s) 417, 707, 1125
BamHI GGATCC 2 cut(s) 451, 1159
BanI GGYRCC 2 cut(s) 233, 941
BanII GRGCYC 3 cut(s) 36, 396, 1104
BbvI GCAGC 8 cut(s) 273, 435, 493, 713, 771, 981, 1143, 1201
BcgI CGANNNNNNTGC 4 cut(s) 229, 263, 937, 971
BciT130I CCWGG 8 cut(s) 136, 231, 299, 398, 844, 939, 1007, 1106
BcnI CCSGG 1 cut(s) 38
BfaI CTAG 7 cut(s) 60, 264, 377, 518, 972, 1085, 1226
BfmI CTRYAG 2 cut(s) 287, 995
BglII AGATCT 2 cut(s) 102, 810
BisI GCNGC 9 cut(s) 287, 424, 507, 702, 760, 995, 1132, 1215, 1410
BlsI GCNGC 9 cut(s) 288, 425, 508, 703, 761, 996, 1133, 1216, 1411
BmcAI AGTACT 1 cut(s) 58
Bme1390I CCNGG 9 cut(s) 38, 136, 231, 299, 398, 844, 939, 1007, 1106
BmeT110I CYCGRG 3 cut(s) 417, 707, 1125
BmrFI CCNGG 9 cut(s) 38, 136, 231, 299, 398, 844, 939, 1007, 1106
BmsI GCATC 2 cut(s) 249, 957
Bpu10I CCTNAGC 2 cut(s) 510, 1218
BpuEI CTTGAG 2 cut(s) 200, 908
BpuMI CCSGG 1 cut(s) 38
BsaJI CCNNGG 2 cut(s) 328, 1036
Bsc4I CCNNNNNNNGG 4 cut(s) 236, 289, 944, 997
Bse118I RCCGGY 2 cut(s) 236, 944
BseBI CCWGG 8 cut(s) 136, 231, 299, 398, 844, 939, 1007, 1106
BseDI CCNNGG 2 cut(s) 328, 1036
BseGI GGATG 6 cut(s) 200, 343, 637, 908, 1051, 1345
BseLI CCNNNNNNNGG 4 cut(s) 236, 289, 944, 997
BseRI GAGGAG 1 cut(s) 747
BseXI GCAGC 8 cut(s) 273, 435, 493, 713, 771, 981, 1143, 1201
BshFI GGCC 6 cut(s) 131, 221, 666, 839, 929, 1374
BshNI GGYRCC 2 cut(s) 233, 941
BsiHKCI CYCGRG 3 cut(s) 417, 707, 1125
BsiSI CCGG 5 cut(s) 38, 237, 283, 945, 991
BsiWI CGTACG 2 cut(s) 696, 1404
BslFI GGGAC 2 cut(s) 572, 1280
BslI CCNNNNNNNGG 4 cut(s) 236, 289, 944, 997
BsmFI GGGAC 2 cut(s) 572, 1280
BsmI GAATGC 4 cut(s) 208, 683, 916, 1391
BsnI GGCC 6 cut(s) 131, 221, 666, 839, 929, 1374
BsoBI CYCGRG 3 cut(s) 417, 707, 1125
Bsp1286I GDGCHC 3 cut(s) 36, 396, 1104
Bsp143I GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
BspACI CCGC 5 cut(s) 9, 325, 467, 1033, 1175
BspANI GGCC 6 cut(s) 131, 221, 666, 839, 929, 1374
BspMAI CTGCAG 2 cut(s) 291, 999
BspPI GGATC 6 cut(s) 300, 446, 459, 1008, 1154, 1167
BspT107I GGYRCC 2 cut(s) 233, 941
BsrFI RCCGGY 2 cut(s) 236, 944
BssAI RCCGGY 2 cut(s) 236, 944
BssECI CCNNGG 2 cut(s) 328, 1036
BssMI GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
BssT1I CCWWGG 2 cut(s) 328, 1036
Bst2UI CCWGG 8 cut(s) 136, 231, 299, 398, 844, 939, 1007, 1106
Bst4CI ACNGT 6 cut(s) 184, 374, 533, 892, 1082, 1241
BstDEI CTNAG 6 cut(s) 500, 510, 659, 1208, 1218, 1367
BstF5I GGATG 6 cut(s) 200, 343, 637, 908, 1051, 1345
BstHHI GCGC 2 cut(s) 499, 1207
BstKTI GATC 6 cut(s) 105, 295, 454, 813, 1003, 1162
BstMBI GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
BstMWI GCNNNNNNNGC 2 cut(s) 503, 1211
BstNI CCWGG 8 cut(s) 136, 231, 299, 398, 844, 939, 1007, 1106
BstSCI CCNGG 9 cut(s) 36, 134, 229, 297, 396, 842, 937, 1005, 1104
BstSFI CTRYAG 2 cut(s) 287, 995
BstV1I GCAGC 8 cut(s) 273, 435, 493, 713, 771, 981, 1143, 1201
BstX2I RGATCY 4 cut(s) 102, 451, 810, 1159
BstYI RGATCY 4 cut(s) 102, 451, 810, 1159
BsuRI GGCC 6 cut(s) 131, 221, 666, 839, 929, 1374
BtgZI GCGATG 3 cut(s) 232, 777, 940
BtsCI GGATG 6 cut(s) 200, 343, 637, 908, 1051, 1345
BtsIMutI CAGTG 2 cut(s) 672, 1380
CfoI GCGC 2 cut(s) 499, 1207
Cfr10I RCCGGY 2 cut(s) 236, 944
Csp6I GTAC 8 cut(s) 57, 234, 434, 697, 745, 942, 1142, 1405
CviAII CATG 6 cut(s) 474, 487, 668, 1182, 1195, 1376
CviQI GTAC 8 cut(s) 57, 234, 434, 697, 745, 942, 1142, 1405
DdeI CTNAG 6 cut(s) 500, 510, 659, 1208, 1218, 1367
DpnI GATC 6 cut(s) 104, 294, 453, 812, 1002, 1161
DpnII GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
DraI TTTAAA 2 cut(s) 151, 859
EciI GGCGGA 1 cut(s) 24
Eco130I CCWWGG 2 cut(s) 328, 1036
Eco24I GRGCYC 3 cut(s) 36, 396, 1104
Eco88I CYCGRG 3 cut(s) 417, 707, 1125
EcoRII CCWGG 8 cut(s) 134, 229, 297, 396, 842, 937, 1005, 1104
EcoT14I CCWWGG 2 cut(s) 328, 1036
EcoT38I GRGCYC 3 cut(s) 36, 396, 1104
ErhI CCWWGG 2 cut(s) 328, 1036
FaeI CATG 6 cut(s) 477, 490, 671, 1185, 1198, 1379
FaqI GGGAC 2 cut(s) 572, 1280
FatI CATG 6 cut(s) 473, 486, 667, 1181, 1194, 1375
FblI GTMKAC 2 cut(s) 186, 894
Fnu4HI GCNGC 9 cut(s) 287, 424, 507, 702, 760, 995, 1132, 1215, 1410
FokI GGATG 6 cut(s) 207, 330, 644, 915, 1038, 1352
FriOI GRGCYC 3 cut(s) 36, 396, 1104
Fsp4HI GCNGC 9 cut(s) 287, 424, 507, 702, 760, 995, 1132, 1215, 1410
FspBI CTAG 7 cut(s) 60, 264, 377, 518, 972, 1085, 1226
GlaI GCGC 2 cut(s) 498, 1206
GluI GCNGC 9 cut(s) 287, 424, 507, 702, 760, 995, 1132, 1215, 1410
HaeIII GGCC 6 cut(s) 131, 221, 666, 839, 929, 1374
HapII CCGG 5 cut(s) 38, 237, 283, 945, 991
HhaI GCGC 2 cut(s) 499, 1207
Hin1II CATG 6 cut(s) 477, 490, 671, 1185, 1198, 1379
Hin6I GCGC 2 cut(s) 497, 1205
HinP1I GCGC 2 cut(s) 497, 1205
HinfI GANTC 6 cut(s) 173, 587, 689, 881, 1295, 1397
HpaII CCGG 5 cut(s) 38, 237, 283, 945, 991
HphI GGTGA 8 cut(s) 182, 287, 322, 545, 890, 995, 1030, 1253
Hpy166II GTNNAC 2 cut(s) 187, 895
Hpy188III TCNNGA 8 cut(s) 377, 584, 686, 707, 1085, 1292, 1394, 1415
Hpy8I GTNNAC 2 cut(s) 187, 895
HpyAV CCTTC 9 cut(s) 62, 491, 579, 638, 648, 1199, 1287, 1346, 1356
HpyCH4III ACNGT 6 cut(s) 184, 374, 533, 892, 1082, 1241
HpyCH4V TGCA 4 cut(s) 85, 289, 793, 997
HpyF10VI GCNNNNNNNGC 2 cut(s) 503, 1211
HpyF3I CTNAG 6 cut(s) 500, 510, 659, 1208, 1218, 1367
Hsp92II CATG 6 cut(s) 477, 490, 671, 1185, 1198, 1379
HspAI GCGC 2 cut(s) 497, 1205
KpnI GGTACC 2 cut(s) 237, 945
Kzo9I GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
LmnI GCTCC 7 cut(s) 39, 74, 399, 709, 782, 1107, 1417
Lsp1109I GCAGC 8 cut(s) 273, 435, 493, 713, 771, 981, 1143, 1201
LweI GCATC 2 cut(s) 249, 957
MaeI CTAG 7 cut(s) 60, 264, 377, 518, 972, 1085, 1226
MaeIII GTNAC 4 cut(s) 310, 533, 1018, 1241
MalI GATC 6 cut(s) 104, 294, 453, 812, 1002, 1161
MboI GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
MflI RGATCY 4 cut(s) 102, 451, 810, 1159
MhlI GDGCHC 3 cut(s) 36, 396, 1104
MluCI AATT 5 cut(s) 63, 317, 407, 1025, 1115
MroXI GAANNNNTTC 2 cut(s) 104, 812
MseI TTAA 5 cut(s) 42, 150, 321, 858, 1029
MslI CAYNNNNRTG 2 cut(s) 257, 965
MspI CCGG 5 cut(s) 38, 237, 283, 945, 991
MspR9I CCNGG 9 cut(s) 38, 136, 231, 299, 398, 844, 939, 1007, 1106
Mva1269I GAATGC 4 cut(s) 208, 683, 916, 1391
MvaI CCWGG 8 cut(s) 136, 231, 299, 398, 844, 939, 1007, 1106
MwoI GCNNNNNNNGC 2 cut(s) 503, 1211
NciI CCSGG 1 cut(s) 38
NdeII GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
NlaIII CATG 6 cut(s) 477, 490, 671, 1185, 1198, 1379
NmuCI GTSAC 4 cut(s) 310, 533, 1018, 1241
PaeR7I CTCGAG 2 cut(s) 417, 1125
PcsI WCGNNNNNNNCGW 2 cut(s) 705, 1413
PctI GAATGC 4 cut(s) 208, 683, 916, 1391
PdmI GAANNNNTTC 2 cut(s) 104, 812
PfeI GAWTC 6 cut(s) 173, 587, 689, 881, 1295, 1397
Pfl23II CGTACG 2 cut(s) 696, 1404
PkrI GCNGC 9 cut(s) 288, 425, 508, 703, 761, 996, 1133, 1216, 1411
Psp6I CCWGG 8 cut(s) 134, 229, 297, 396, 842, 937, 1005, 1104
PspGI CCWGG 8 cut(s) 134, 229, 297, 396, 842, 937, 1005, 1104
PspLI CGTACG 2 cut(s) 696, 1404
PspXI VCTCGAGB 2 cut(s) 417, 1125
PstI CTGCAG 2 cut(s) 291, 999
PsuI RGATCY 4 cut(s) 102, 451, 810, 1159
RsaI GTAC 8 cut(s) 58, 235, 435, 698, 746, 943, 1143, 1406
RsaNI GTAC 8 cut(s) 57, 234, 434, 697, 745, 942, 1142, 1405
RseI CAYNNNNRTG 2 cut(s) 257, 965
SaqAI TTAA 5 cut(s) 42, 150, 321, 858, 1029
SatI GCNGC 9 cut(s) 287, 424, 507, 702, 760, 995, 1132, 1215, 1410
Sau3AI GATC 6 cut(s) 102, 292, 451, 810, 1000, 1159
ScaI AGTACT 1 cut(s) 58
ScrFI CCNGG 9 cut(s) 38, 136, 231, 299, 398, 844, 939, 1007, 1106
SduI GDGCHC 3 cut(s) 36, 396, 1104
SfaNI GCATC 2 cut(s) 249, 957
SfcI CTRYAG 2 cut(s) 287, 995
Sfr274I CTCGAG 2 cut(s) 417, 1125
SlaI CTCGAG 2 cut(s) 417, 1125
SmiMI CAYNNNNRTG 2 cut(s) 257, 965
SmlI CTYRAG 4 cut(s) 215, 417, 923, 1125
SmoI CTYRAG 4 cut(s) 215, 417, 923, 1125
Sse9I AATT 5 cut(s) 63, 317, 407, 1025, 1115
SsiI CCGC 5 cut(s) 9, 325, 467, 1033, 1175
SspI AATATT 4 cut(s) 157, 577, 865, 1285
SspMI CTAG 7 cut(s) 60, 264, 377, 518, 972, 1085, 1226
StyD4I CCNGG 9 cut(s) 36, 134, 229, 297, 396, 842, 937, 1005, 1104
StyI CCWWGG 2 cut(s) 328, 1036
TaaI ACNGT 6 cut(s) 184, 374, 533, 892, 1082, 1241
TaqI TCGA 2 cut(s) 418, 1126
TasI AATT 5 cut(s) 63, 317, 407, 1025, 1115
TatI WGTACW 4 cut(s) 56, 433, 744, 1141
TfiI GAWTC 6 cut(s) 173, 587, 689, 881, 1295, 1397
Tru1I TTAA 5 cut(s) 42, 150, 321, 858, 1029
Tru9I TTAA 5 cut(s) 42, 150, 321, 858, 1029
TscAI CASTG 2 cut(s) 679, 1387
TseFI GTSAC 4 cut(s) 310, 533, 1018, 1241
TseI GCWGC 9 cut(s) 286, 423, 506, 701, 759, 994, 1131, 1214, 1409
Tsp45I GTSAC 4 cut(s) 310, 533, 1018, 1241
TspGWI ACGGA 3 cut(s) 134, 734, 842
TspRI CASTG 2 cut(s) 679, 1387
XapI RAATTY 4 cut(s) 317, 407, 1025, 1115
XbaI TCTAGA 2 cut(s) 376, 1084
XhoI CTCGAG 2 cut(s) 417, 1125
XmiI GTMKAC 2 cut(s) 186, 894
XmnI GAANNNNTTC 2 cut(s) 104, 812
XspI CTAG 7 cut(s) 60, 264, 377, 518, 972, 1085, 1226
ZrmI AGTACT 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.