Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g00710 FvH4_3g00710 FvH4_3g00710 |
| malus_domestica | MD10G1335700.v1.1 |
| prunus_persica | Prupe.4G008100_v2.0.a1 |
| pyrus_communis | pycom10g28530 |
| rosa_chinensis | RchiOBHm_Chr5g0000961 |
| rosa_laevigata | RLG00000030909 |
| rosa_multiflora | Rmu_sc0019885.1_g000005 Rmu_sc0025943.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00075310 |
| rosa_rugosa | Rorug04G0388000 Rorug04G0388000 |
| rosa_samantha | Rh5AG007600 Rh5BG009700 Rh5CG008300 Rh5DG008300 |
| rosa_wichuraiana | Rw5G000790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 300 |
| AciI | CCGC | 3 cut(s) | 121, 180, 200 |
| AclI | AACGTT | 1 cut(s) | 217 |
| AclWI | GGATC | 1 cut(s) | 75 |
| AcsI | RAATTY | 2 cut(s) | 285, 330 |
| AcuI | CTGAAG | 1 cut(s) | 45 |
| AgsI | TTSAA | 2 cut(s) | 191, 290 |
| AjiI | CACGTC | 1 cut(s) | 235 |
| AluBI | AGCT | 2 cut(s) | 173, 185 |
| AluI | AGCT | 2 cut(s) | 173, 185 |
| AlwI | GGATC | 1 cut(s) | 75 |
| AoxI | GGCC | 1 cut(s) | 244 |
| ApoI | RAATTY | 2 cut(s) | 285, 330 |
| AspLEI | GCGC | 1 cut(s) | 10 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| AsuHPI | GGTGA | 1 cut(s) | 236 |
| BaeGI | GKGCMC | 1 cut(s) | 147 |
| BccI | CCATC | 1 cut(s) | 299 |
| BfoI | RGCGCY | 1 cut(s) | 11 |
| BfuAI | ACCTGC | 1 cut(s) | 300 |
| BisI | GCNGC | 1 cut(s) | 201 |
| BlsI | GCNGC | 1 cut(s) | 202 |
| BmgBI | CACGTC | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BmsI | GCATC | 1 cut(s) | 187 |
| BsaWI | WCCGGW | 1 cut(s) | 221 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 14, 44 |
| Bse118I | RCCGGY | 1 cut(s) | 210 |
| BseGI | GGATG | 1 cut(s) | 202 |
| BseRI | GAGGAG | 1 cut(s) | 312 |
| BseSI | GKGCMC | 1 cut(s) | 147 |
| BseYI | CCCAGC | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 246 |
| BsiSI | CCGG | 3 cut(s) | 211, 222, 258 |
| BsnI | GGCC | 1 cut(s) | 246 |
| Bsp1286I | GDGCHC | 1 cut(s) | 147 |
| Bsp143I | GATC | 1 cut(s) | 80 |
| BspACI | CCGC | 3 cut(s) | 121, 180, 200 |
| BspANI | GGCC | 1 cut(s) | 246 |
| BspMI | ACCTGC | 1 cut(s) | 300 |
| BspPI | GGATC | 1 cut(s) | 75 |
| BsrFI | RCCGGY | 1 cut(s) | 210 |
| BssAI | RCCGGY | 1 cut(s) | 210 |
| BssMI | GATC | 1 cut(s) | 80 |
| Bst4CI | ACNGT | 1 cut(s) | 362 |
| BstC8I | GCNNGC | 1 cut(s) | 212 |
| BstF5I | GGATG | 1 cut(s) | 202 |
| BstH2I | RGCGCY | 1 cut(s) | 11 |
| BstHHI | GCGC | 1 cut(s) | 10 |
| BstKTI | GATC | 1 cut(s) | 83 |
| BstMBI | GATC | 1 cut(s) | 80 |
| BstSLI | GKGCMC | 1 cut(s) | 147 |
| BsuRI | GGCC | 1 cut(s) | 246 |
| BtgZI | GCGATG | 1 cut(s) | 318 |
| BtrI | CACGTC | 1 cut(s) | 235 |
| BtsCI | GGATG | 1 cut(s) | 202 |
| BtsI | GCAGTG | 1 cut(s) | 22 |
| BtsIMutI | CAGTG | 1 cut(s) | 22 |
| BveI | ACCTGC | 1 cut(s) | 300 |
| Cac8I | GCNNGC | 1 cut(s) | 212 |
| CfoI | GCGC | 1 cut(s) | 10 |
| Cfr10I | RCCGGY | 1 cut(s) | 210 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| CviAII | CATG | 1 cut(s) | 336 |
| CviJI | RGCY | 6 cut(s) | 65, 173, 185, 203, 246, 343 |
| CviKI_1 | RGCY | 6 cut(s) | 65, 173, 185, 203, 246, 343 |
| DpnI | GATC | 1 cut(s) | 82 |
| DpnII | GATC | 1 cut(s) | 80 |
| EciI | GGCGGA | 1 cut(s) | 110 |
| Eco57I | CTGAAG | 1 cut(s) | 45 |
| EcoRI | GAATTC | 1 cut(s) | 285 |
| FaeI | CATG | 1 cut(s) | 339 |
| FaiI | YATR | 2 cut(s) | 150, 337 |
| FatI | CATG | 1 cut(s) | 335 |
| Fnu4HI | GCNGC | 1 cut(s) | 201 |
| FokI | GGATG | 1 cut(s) | 209 |
| Fsp4HI | GCNGC | 1 cut(s) | 201 |
| GlaI | GCGC | 1 cut(s) | 9 |
| GluI | GCNGC | 1 cut(s) | 201 |
| GsaI | CCCAGC | 1 cut(s) | 180 |
| HaeII | RGCGCY | 1 cut(s) | 11 |
| HaeIII | GGCC | 1 cut(s) | 246 |
| HapII | CCGG | 3 cut(s) | 211, 222, 258 |
| HhaI | GCGC | 1 cut(s) | 10 |
| Hin1II | CATG | 1 cut(s) | 339 |
| Hin6I | GCGC | 1 cut(s) | 8 |
| HinP1I | GCGC | 1 cut(s) | 8 |
| HinfI | GANTC | 1 cut(s) | 229 |
| HpaII | CCGG | 3 cut(s) | 211, 222, 258 |
| HphI | GGTGA | 1 cut(s) | 236 |
| Hpy188I | TCNGA | 3 cut(s) | 104, 166, 295 |
| Hpy188III | TCNNGA | 1 cut(s) | 326 |
| HpyCH4III | ACNGT | 1 cut(s) | 362 |
| HpyCH4IV | ACGT | 2 cut(s) | 217, 234 |
| HpySE526I | ACGT | 2 cut(s) | 217, 234 |
| Hsp92II | CATG | 1 cut(s) | 339 |
| HspAI | GCGC | 1 cut(s) | 8 |
| KroI | GCCGGC | 1 cut(s) | 210 |
| KroNI | GCCGGC | 1 cut(s) | 212 |
| Kzo9I | GATC | 1 cut(s) | 80 |
| LmnI | GCTCC | 2 cut(s) | 178, 182 |
| LpnPI | CCDG | 6 cut(s) | 190, 224, 235, 271, 295, 339 |
| LweI | GCATC | 1 cut(s) | 187 |
| MaeII | ACGT | 2 cut(s) | 217, 234 |
| MaeIII | GTNAC | 1 cut(s) | 356 |
| MalI | GATC | 1 cut(s) | 82 |
| MboI | GATC | 1 cut(s) | 80 |
| MboII | GAAGA | 2 cut(s) | 51, 269 |
| MhlI | GDGCHC | 1 cut(s) | 147 |
| MluCI | AATT | 3 cut(s) | 98, 285, 330 |
| MnlI | CCTC | 6 cut(s) | 38, 76, 163, 172, 330, 333 |
| MroNI | GCCGGC | 1 cut(s) | 210 |
| MspA1I | CMGCKG | 1 cut(s) | 180 |
| MspI | CCGG | 3 cut(s) | 211, 222, 258 |
| NaeI | GCCGGC | 1 cut(s) | 212 |
| NdeII | GATC | 1 cut(s) | 80 |
| NgoMIV | GCCGGC | 1 cut(s) | 210 |
| NlaIII | CATG | 1 cut(s) | 339 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 214 |
| PdiI | GCCGGC | 1 cut(s) | 212 |
| PfeI | GAWTC | 1 cut(s) | 229 |
| PkrI | GCNGC | 1 cut(s) | 202 |
| Psp1406I | AACGTT | 1 cut(s) | 217 |
| PspFI | CCCAGC | 1 cut(s) | 176 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| SatI | GCNGC | 1 cut(s) | 201 |
| Sau3AI | GATC | 1 cut(s) | 80 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| SduI | GDGCHC | 1 cut(s) | 147 |
| SetI | ASST | 6 cut(s) | 46, 175, 187, 220, 237, 314 |
| SfaNI | GCATC | 1 cut(s) | 187 |
| Sse9I | AATT | 3 cut(s) | 98, 285, 330 |
| SsiI | CCGC | 3 cut(s) | 121, 180, 200 |
| TaaI | ACNGT | 1 cut(s) | 362 |
| TaiI | ACGT | 2 cut(s) | 220, 237 |
| TaqI | TCGA | 1 cut(s) | 79 |
| TasI | AATT | 3 cut(s) | 98, 285, 330 |
| TauI | GCSGC | 1 cut(s) | 203 |
| TfiI | GAWTC | 1 cut(s) | 229 |
| TscAI | CASTG | 1 cut(s) | 29 |
| TspDTI | ATGAA | 2 cut(s) | 17, 324 |
| TspRI | CASTG | 1 cut(s) | 29 |
| XapI | RAATTY | 2 cut(s) | 285, 330 |