VQ motif
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g02470 |
| prunus_persica | Prupe.6G347000_v2.0.a1 |
| pyrus_communis | pycom04g20160 pycom12g22430 |
| rosa_chinensis | RchiOBHm_Chr3g0450331 |
| rosa_laevigata | RLG00000025740 |
| rosa_multiflora | Rmu_sc0005298.1_g000003 Rmu_sc0006063.1_g000001 Rmu_sc0033380.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00428050 |
| rosa_rugosa | Rorug02G0626900 |
| rosa_samantha | Rh3AG027200 Rh3BG027800 Rh3CG026700 Rh3DG027800 |
| rosa_wichuraiana | Rw3G002120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 191 |
| AccII | CGCG | 1 cut(s) | 21 |
| AciI | CCGC | 1 cut(s) | 19 |
| AcsI | RAATTY | 1 cut(s) | 166 |
| AcuI | CTGAAG | 1 cut(s) | 111 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 106, 191 |
| AgsI | TTSAA | 1 cut(s) | 113 |
| AluBI | AGCT | 5 cut(s) | 41, 65, 210, 230, 271 |
| AluI | AGCT | 5 cut(s) | 41, 65, 210, 230, 271 |
| AoxI | GGCC | 1 cut(s) | 160 |
| ApoI | RAATTY | 1 cut(s) | 166 |
| AspS9I | GGNCC | 1 cut(s) | 160 |
| BccI | CCATC | 1 cut(s) | 100 |
| BclI | TGATCA | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 1 cut(s) | 160 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 106, 191 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 106, 191 |
| BseMII | CTCAG | 1 cut(s) | 33 |
| BseRI | GAGGAG | 1 cut(s) | 70 |
| BseYI | CCCAGC | 1 cut(s) | 210 |
| Bsh1236I | CGCG | 1 cut(s) | 21 |
| BshFI | GGCC | 1 cut(s) | 162 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 106, 191 |
| BsnI | GGCC | 1 cut(s) | 162 |
| Bsp143I | GATC | 2 cut(s) | 81, 187 |
| BspACI | CCGC | 1 cut(s) | 19 |
| BspANI | GGCC | 1 cut(s) | 162 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BspFNI | CGCG | 1 cut(s) | 21 |
| BssMI | GATC | 2 cut(s) | 81, 187 |
| Bst4CI | ACNGT | 1 cut(s) | 293 |
| BstC8I | GCNNGC | 1 cut(s) | 208 |
| BstDEI | CTNAG | 2 cut(s) | 11, 42 |
| BstFNI | CGCG | 1 cut(s) | 21 |
| BstKTI | GATC | 2 cut(s) | 84, 190 |
| BstMBI | GATC | 2 cut(s) | 81, 187 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstUI | CGCG | 1 cut(s) | 21 |
| BsuRI | GGCC | 1 cut(s) | 162 |
| Cac8I | GCNNGC | 1 cut(s) | 208 |
| Cfr13I | GGNCC | 1 cut(s) | 160 |
| CviAII | CATG | 1 cut(s) | 191 |
| CviJI | RGCY | 8 cut(s) | 41, 65, 99, 116, 162, 210, 230, 271 |
| CviKI_1 | RGCY | 8 cut(s) | 41, 65, 99, 116, 162, 210, 230, 271 |
| DdeI | CTNAG | 2 cut(s) | 11, 42 |
| DpnI | GATC | 2 cut(s) | 83, 189 |
| DpnII | GATC | 2 cut(s) | 81, 187 |
| Eco57I | CTGAAG | 1 cut(s) | 111 |
| FaeI | CATG | 1 cut(s) | 194 |
| FaiI | YATR | 6 cut(s) | 80, 90, 104, 192, 225, 248 |
| FatI | CATG | 1 cut(s) | 190 |
| FbaI | TGATCA | 1 cut(s) | 81 |
| GsaI | CCCAGC | 1 cut(s) | 214 |
| HaeIII | GGCC | 1 cut(s) | 162 |
| Hin1II | CATG | 1 cut(s) | 194 |
| HindIII | AAGCTT | 1 cut(s) | 228 |
| Hpy188I | TCNGA | 4 cut(s) | 130, 137, 172, 286 |
| Hpy188III | TCNNGA | 2 cut(s) | 149, 185 |
| HpyCH4III | ACNGT | 1 cut(s) | 293 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 42 |
| Hsp92II | CATG | 1 cut(s) | 194 |
| Ksp22I | TGATCA | 1 cut(s) | 81 |
| Kzo9I | GATC | 2 cut(s) | 81, 187 |
| LmnI | GCTCC | 2 cut(s) | 4, 57 |
| LpnPI | CCDG | 4 cut(s) | 109, 134, 196, 198 |
| MalI | GATC | 2 cut(s) | 83, 189 |
| MboI | GATC | 2 cut(s) | 81, 187 |
| MfeI | CAATTG | 1 cut(s) | 141 |
| MluCI | AATT | 2 cut(s) | 141, 166 |
| MnlI | CCTC | 2 cut(s) | 39, 48 |
| MunI | CAATTG | 1 cut(s) | 141 |
| MvnI | CGCG | 1 cut(s) | 21 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NdeII | GATC | 2 cut(s) | 81, 187 |
| NlaIII | CATG | 1 cut(s) | 194 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 191 |
| PspFI | CCCAGC | 1 cut(s) | 210 |
| PspPI | GGNCC | 1 cut(s) | 160 |
| Sau3AI | GATC | 2 cut(s) | 81, 187 |
| Sau96I | GGNCC | 1 cut(s) | 160 |
| SetI | ASST | 5 cut(s) | 43, 67, 212, 232, 273 |
| Sse9I | AATT | 2 cut(s) | 141, 166 |
| SsiI | CCGC | 1 cut(s) | 19 |
| TaaI | ACNGT | 1 cut(s) | 293 |
| TasI | AATT | 2 cut(s) | 141, 166 |
| TspDTI | ATGAA | 2 cut(s) | 263, 290 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 191 |
| XapI | RAATTY | 1 cut(s) | 166 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 103 |