Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000029.1

Orthogroup ID

OG0007212

Physical Location & Seq

Genomic Coordinates Reverse (-)

10295 .. 19691

Gene Structure 9397 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000029.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

atgcgacgactgcacgcccgtaaaggggacaccagttctaaacctaccgacgacgatatggatccggtcaagctccaaatccggcccagcacccgatccaatctcttctcccgcagccccaagcagagcaccagatcaagcttcgtaatcctcgcctccgtcaccatcgccaccgctttcgtcctctgctatctcctcttcttcaccagaagctccagaaattcgaagcgctacgggattgtgatcgacggcggcagtacgggcacccgaatccacgtgttcgggtacggagtcgacgccgccaattccgccgtgttcgacttcggcaaggacgggttggcgtccctgcgggtcaacccggggctgtcgtcgtttgcggaggatccgaaagctgcgggcgggtcgttgaaggagcttattgagtttgccaaggggagggttccgaagcagcagtgggggaacacggaggttcggcttatggccacggcgggcctccggctgctggatttggatgttcagagtcggattctggagtcttgcagaaaggtgttgaggagctccgggtttaagtttcaggacgagtgggcttcagtcattacaggttctgacgaaggactatatgcgtgggttgttgcaaaccatgcccttggaactcttggtggtgatcctctgaagacaattgggattattgaacttggcggtgcttctgctcaggggacatttgtttcaagtgagccaatgcctccgcagtttgcgcgtcctgtcaaagttggaaatgtcacctacaatctctacagtcacagctttcttcattatggccagaatgttgcatatgaatcgttgaaggaagcacttgcgtcaggagacttcagctcagcttcagaagcacttcagaatagaatgataatagatccttgcactcctaaaggatattcatataaaatggagtcttcaaagctttcaccaacaatgagtgatcacatagtgttgtacgtcgaccgtctcattaggcccatggcctcgcagccgccgtccgatgttaaggcggcagtggaggacccggctccggagaccgaggccgaaccttcgtctagctcgtcgtccgcggcggagggcgatgaggaggaggaggagccgttgattcagacggcggagtgccgcatttgccaggatgaggatagcgtcaacaatttggaaactccttgtgcctgttgcggcagcctcaagtatgctcataggaagtgtgttcagcattggtgcaatgagaaaggagatataacttgtgaaatttgccatcagccttaccaaccaggctacactgcacctcctcgtccacatcctgatgaaactactattgaaataggaggctggacactttctgggtctcctttgagtttggacgatccacgcatcttgtcaattacggaagcagaacgtcagtttctggatactgaatatgatgagtatgctgcttcaagtagtaatggggctccatttttccgatccgctgccttaattctaatggcccttcttatcttgcgacatgcattgagggtcacagatgatgattccggtgatgatacatctgctattttctcactctttttgcttcgagcggctggatttcttttgccctgctacattatggcttgggccatcagtatcttgcagcgtcgacagcaaagacaggaagctgcagcattggcagcaacacaagttgcttttgttcttcaatctgggcaacataggggtctgcagtttgcggatcttggattcattatagatctcatgaagcagtggcccagactaggatggggcattcccacctttgttttgttgtacctttatcctaaagataggtttatcaagaagaagcgacctaatgtgatcatgttcgaattatcggagcgccatctgcactcaccttctctcctgtgtcaaagttcagtagggcatggtgagcgcctgagcgcgaaggaatcccggccatgctggaatagtactcctctgaacagaaatgtcggcatttctcagggaacagaaagtttagcaacttgtgatgaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005887 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0007155 GO:0007275 GO:0007596 GO:0007599 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009611 GO:0009653 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017110 GO:0017111 GO:0019439 GO:0022414 GO:0022607 GO:0022610 GO:0030198 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0034641 GO:0034655 GO:0034656 GO:0042060 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045229 GO:0046483 GO:0046700 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050817 GO:0050878 GO:0050896 GO:0055086 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:0090567 GO:0099402 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko05169 map00230 map00240 map05169

Pfam Domains

Protein Families

GDA1_CD39

Protein Analysis

688

Amino Acids

75.62

Weight (kDa)

5.91

Isoelectric Point (pI)

54.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02970
fragaria_vesca	FvH4_4g31330 FvH4_4g31330 FvH4_4g31330
malus_domestica	MD13G1072000.v1.1 MD16G1072600.v1.1
prunus_persica	Prupe.1G275000_v2.0.a1 Prupe.1G275000_v2.0.a1 Prupe.1G275000_v2.0.a1 Prupe.1G275000_v2.0.a1
pyrus_communis	pycom13g06460 pycom16g06290
rosa_chinensis	RchiOBHm_Chr4g0439831
rosa_laevigata	RLG00000006236
rosa_multiflora	Rmu_co8364541.1_g000001 Rmu_sc0010226.1_g000001 Rmu_ssc0000029.1_g000002
rosa_roxburghii	Rroxscaffold_5G00380730
rosa_rugosa	Rorug04G0321600 Rorug04G0321700
rosa_samantha	Rh4AG372500 Rh4BG384900 Rh4CG399300 Rh4DG379100
rosa_wichuraiana	Rw4G031840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	263
AccBSI	CCGCTC	1 cut(s)	1616
AccI	GTMKAC	3 cut(s)	294, 996, 1675
AccII	CGCG	3 cut(s)	757, 1106, 1973
AccIII	TCCGGA	1 cut(s)	1066
AcoI	YGGCCR	3 cut(s)	480, 817, 1985
AcsI	RAATTY	2 cut(s)	220, 1287
AcuI	CTGAAG	5 cut(s)	573, 692, 853, 864, 875
AcvI	CACGTG	1 cut(s)	277
AcyI	GRCGYC	2 cut(s)	297, 341
AdeI	CACNNNGTG	1 cut(s)	985
AfaI	GTAC	5 cut(s)	259, 287, 992, 1841, 2002
AfeI	AGCGCT	1 cut(s)	230
AfiI	CCNNNNNNNGG	7 cut(s)	24, 25, 435, 502, 1066, 1174, 1808
AflIII	ACRYGT	1 cut(s)	276
AgsI	TTSAA	8 cut(s)	409, 692, 729, 844, 954, 1358, 1476, 1733
AjnI	CCWGG	2 cut(s)	1167, 1309
Alw21I	GWGCWC	2 cut(s)	131, 560
Alw26I	GTCTC	4 cut(s)	858, 1007, 1064, 1389
AlwNI	CAGNNNCTG	2 cut(s)	605, 1444
Ama87I	CYCGRG	1 cut(s)	358
Aor13HI	TCCGGA	1 cut(s)	1066
Aor51HI	AGCGCT	1 cut(s)	230
ApoI	RAATTY	2 cut(s)	220, 1287
Asp700I	GAANNNNTTC	1 cut(s)	888
AspLEI	GCGC	5 cut(s)	231, 757, 1911, 1965, 1973
AspS9I	GGNCC	7 cut(s)	84, 490, 1011, 1057, 1525, 1653, 1800
AsuC2I	CCSGG	5 cut(s)	359, 360, 562, 1061, 1984
AsuHPI	GGTGA	8 cut(s)	154, 196, 674, 772, 954, 1586, 1914, 1970
AsuII	TTCGAA	2 cut(s)	224, 1896
AvaI	CYCGRG	1 cut(s)	358
AvaII	GGWCC	1 cut(s)	1057
BaeGI	GKGCMC	1 cut(s)	266
BalI	TGGCCA	2 cut(s)	482, 819
BamHI	GGATCC	2 cut(s)	61, 382
BanI	GGYRCC	1 cut(s)	263
BanII	GRGCYC	2 cut(s)	560, 1492
BbrPI	CACGTG	1 cut(s)	277
BbsI	GAAGAC	2 cut(s)	680, 942
Bbv12I	GWGCWC	2 cut(s)	131, 560
BccI	CCATC	5 cut(s)	173, 1302, 1664, 1806, 1920
BceAI	ACGGC	6 cut(s)	265, 296, 501, 1015, 1120, 1164
BcgI	CGANNNNNNTGC	2 cut(s)	819, 853
BciT130I	CCWGG	2 cut(s)	1169, 1311
BciVI	GTATCC	1 cut(s)	1441
BclI	TGATCA	2 cut(s)	976, 1887
BcnI	CCSGG	5 cut(s)	359, 360, 562, 1061, 1984
BcoDI	GTCTC	4 cut(s)	858, 1007, 1064, 1389
BfaI	CTAG	2 cut(s)	1092, 1808
BfmI	CTRYAG	3 cut(s)	793, 1695, 1754
BfoI	RGCGCY	3 cut(s)	232, 1912, 1966
BfuI	GTATCC	1 cut(s)	1441
BglII	AGATCT	1 cut(s)	1783
BlpI	GCTNAGC	1 cut(s)	874
BmcAI	AGTACT	1 cut(s)	2002
Bme1390I	CCNGG	7 cut(s)	359, 360, 562, 1061, 1169, 1311, 1984
Bme18I	GGWCC	1 cut(s)	1057
BmeT110I	CYCGRG	1 cut(s)	358
BmgT120I	GGNCC	7 cut(s)	84, 490, 1011, 1057, 1525, 1653, 1800
BmiI	GGNNCC	8 cut(s)	63, 265, 384, 441, 1059, 1065, 1134, 1491
BmrFI	CCNGG	7 cut(s)	359, 360, 562, 1061, 1169, 1311, 1984
BmsI	GCATC	1 cut(s)	1419
BpiI	GAAGAC	2 cut(s)	680, 942
BpmI	CTGGAG	2 cut(s)	199, 551
Bpu10I	CCTNAGC	2 cut(s)	711, 1967
Bpu1102I	GCTNAGC	1 cut(s)	874
Bpu14I	TTCGAA	2 cut(s)	224, 1896
BpuEI	CTTGAG	1 cut(s)	1208
BpuMI	CCSGG	5 cut(s)	359, 360, 562, 1061, 1984
BsaAI	YACGTR	1 cut(s)	277
BsaBI	GATNNNNATC	2 cut(s)	60, 242
BsaHI	GRCGYC	2 cut(s)	297, 341
BsaI	GGTCTC	2 cut(s)	1064, 1389
BsaJI	CCNNGG	8 cut(s)	358, 359, 429, 483, 646, 1014, 1074, 1104
BsaWI	WCCGGW	3 cut(s)	64, 1066, 1571
BsaXI	ACNNNNNCTCC	6 cut(s)	1121, 1151, 1309, 1339, 1914, 1944
Bsc4I	CCNNNNNNNGG	7 cut(s)	24, 25, 435, 502, 1066, 1174, 1808
Bse1I	ACTGG	1 cut(s)	33
Bse3DI	GCAATG	1 cut(s)	1267
Bse8I	GATNNNNATC	2 cut(s)	60, 242
BseAI	TCCGGA	1 cut(s)	1066
BseBI	CCWGG	2 cut(s)	1169, 1311
BseDI	CCNNGG	8 cut(s)	358, 359, 429, 483, 646, 1014, 1074, 1104
BseGI	GGATG	4 cut(s)	517, 1177, 1336, 1817
BseJI	GATNNNNATC	2 cut(s)	60, 242
BseLI	CCNNNNNNNGG	7 cut(s)	24, 25, 435, 502, 1066, 1174, 1808
BseMI	GCAATG	1 cut(s)	1267
BseMII	CTCAG	4 cut(s)	725, 888, 1958, 2045
BseNI	ACTGG	1 cut(s)	33
BseRI	GAGGAG	8 cut(s)	185, 568, 1136, 1139, 1142, 1145, 1317, 1995
BseSI	GKGCMC	1 cut(s)	266
BseYI	CCCAGC	1 cut(s)	86
BsgI	GTGCAG	2 cut(s)	1305, 1901
Bsh1236I	CGCG	3 cut(s)	757, 1106, 1973
Bsh1285I	CGRYCG	1 cut(s)	1000
BshNI	GGYRCC	1 cut(s)	263
BsiEI	CGRYCG	1 cut(s)	1000
BsiHKAI	GWGCWC	2 cut(s)	131, 560
BsiHKCI	CYCGRG	1 cut(s)	358
BsiSI	CCGG	9 cut(s)	65, 82, 359, 496, 561, 1061, 1067, 1572, 1984
BslFI	GGGAC	3 cut(s)	41, 328, 730
BslI	CCNNNNNNNGG	7 cut(s)	24, 25, 435, 502, 1066, 1174, 1808
BsmAI	GTCTC	4 cut(s)	858, 1007, 1064, 1389
BsmBI	CGTCTC	1 cut(s)	1007
BsmFI	GGGAC	3 cut(s)	41, 328, 730
BsmI	GAATGC	1 cut(s)	1818
Bso31I	GGTCTC	2 cut(s)	1064, 1389
BsoBI	CYCGRG	1 cut(s)	358
Bsp119I	TTCGAA	2 cut(s)	224, 1896
Bsp1286I	GDGCHC	4 cut(s)	131, 266, 560, 1492
Bsp13I	TCCGGA	1 cut(s)	1066
Bsp1720I	GCTNAGC	1 cut(s)	874
Bsp19I	CCATGG	1 cut(s)	1014
BspCNI	CTCAG	4 cut(s)	724, 887, 1959, 2044
BspEI	TCCGGA	1 cut(s)	1066
BspFNI	CGCG	3 cut(s)	757, 1106, 1973
BspHI	TCATGA	1 cut(s)	1788
BspLI	GGNNCC	8 cut(s)	63, 265, 384, 441, 1059, 1065, 1134, 1491
BspMAI	CTGCAG	2 cut(s)	1699, 1758
BspT104I	TTCGAA	2 cut(s)	224, 1896
BspT107I	GGYRCC	1 cut(s)	263
BspTNI	GGTCTC	2 cut(s)	1064, 1389
BsrBI	CCGCTC	1 cut(s)	1616
BsrDI	GCAATG	1 cut(s)	1267
BsrI	ACTGG	1 cut(s)	33
BssECI	CCNNGG	8 cut(s)	358, 359, 429, 483, 646, 1014, 1074, 1104
BssNI	GRCGYC	2 cut(s)	297, 341
BssT1I	CCWWGG	3 cut(s)	429, 646, 1014
Bst2UI	CCWGG	2 cut(s)	1169, 1311
Bst4CI	ACNGT	2 cut(s)	797, 1001
Bst6I	CTCTTC	2 cut(s)	110, 203
BstACI	GRCGYC	2 cut(s)	297, 341
BstAPI	GCANNNNNTGC	1 cut(s)	641
BstBAI	YACGTR	1 cut(s)	277
BstBI	TTCGAA	2 cut(s)	224, 1896
BstC8I	GCNNGC	3 cut(s)	15, 397, 490
BstDEI	CTNAG	4 cut(s)	711, 874, 1967, 2031
BstDSI	CCRYGG	3 cut(s)	483, 1014, 1104
BstF5I	GGATG	4 cut(s)	517, 1177, 1336, 1817
BstFNI	CGCG	3 cut(s)	757, 1106, 1973
BstH2I	RGCGCY	3 cut(s)	232, 1912, 1966
BstHHI	GCGC	5 cut(s)	231, 757, 1911, 1965, 1973
BstMAI	GTCTC	4 cut(s)	858, 1007, 1064, 1389
BstMCI	CGRYCG	1 cut(s)	1000
BstNI	CCWGG	2 cut(s)	1169, 1311
BstNSI	RCATGY	1 cut(s)	1547
BstSCI	CCNGG	7 cut(s)	357, 358, 560, 1059, 1167, 1309, 1982
BstSFI	CTRYAG	3 cut(s)	793, 1695, 1754
BstSLI	GKGCMC	1 cut(s)	266
BstUI	CGCG	3 cut(s)	757, 1106, 1973
BstV2I	GAAGAC	2 cut(s)	680, 942
BstX2I	RGATCY	5 cut(s)	61, 382, 910, 1765, 1783
BstXI	CCANNNNNNTGG	1 cut(s)	647
BstYI	RGATCY	5 cut(s)	61, 382, 910, 1765, 1783
BsuI	GTATCC	1 cut(s)	1441
BtgI	CCRYGG	3 cut(s)	483, 1014, 1104
BtgZI	GCGATG	2 cut(s)	151, 1131
BtsCI	GGATG	4 cut(s)	517, 1177, 1336, 1817
BtsI	GCAGTG	4 cut(s)	458, 1056, 1317, 1802
BtsIMutI	CAGTG	4 cut(s)	458, 1056, 1317, 1802
Cac8I	GCNNGC	3 cut(s)	15, 397, 490
CaiI	CAGNNNCTG	2 cut(s)	605, 1444
CciI	TCATGA	1 cut(s)	1788
CfoI	GCGC	5 cut(s)	231, 757, 1911, 1965, 1973
Cfr13I	GGNCC	7 cut(s)	84, 490, 1011, 1057, 1525, 1653, 1800
Cfr42I	CCGCGG	1 cut(s)	1107
Cfr9I	CCCGGG	1 cut(s)	358
CseI	GACGC	6 cut(s)	305, 330, 746, 846, 1171, 1661
Csp6I	GTAC	5 cut(s)	258, 286, 991, 1840, 2001
CspCI	CAANNNNNGTGG	2 cut(s)	1395, 1430
CviAII	CATG	7 cut(s)	641, 1015, 1544, 1789, 1891, 1955, 1989
CviQI	GTAC	5 cut(s)	258, 286, 991, 1840, 2001
DdeI	CTNAG	4 cut(s)	711, 874, 1967, 2031
DraIII	CACNNNGTG	1 cut(s)	985
EaeI	YGGCCR	3 cut(s)	480, 817, 1985
Eam1104I	CTCTTC	2 cut(s)	110, 203
EarI	CTCTTC	2 cut(s)	110, 203
EciI	GGCGGA	3 cut(s)	298, 1124, 1166
Ecl136II	GAGCTC	1 cut(s)	558
Eco130I	CCWWGG	3 cut(s)	429, 646, 1014
Eco24I	GRGCYC	2 cut(s)	560, 1492
Eco31I	GGTCTC	2 cut(s)	1064, 1389
Eco47I	GGWCC	1 cut(s)	1057
Eco47III	AGCGCT	1 cut(s)	230
Eco53kI	GAGCTC	1 cut(s)	558
Eco57I	CTGAAG	5 cut(s)	573, 692, 853, 864, 875
Eco72I	CACGTG	1 cut(s)	277
Eco88I	CYCGRG	1 cut(s)	358
EcoICRI	GAGCTC	1 cut(s)	558
EcoO109I	RGGNCCY	1 cut(s)	1057
EcoRII	CCWGG	2 cut(s)	1167, 1309
EcoT14I	CCWWGG	3 cut(s)	429, 646, 1014
EcoT22I	ATGCAT	1 cut(s)	1549
EcoT38I	GRGCYC	2 cut(s)	560, 1492
ErhI	CCWWGG	3 cut(s)	429, 646, 1014
Esp3I	CGTCTC	1 cut(s)	1007
FaeI	CATG	7 cut(s)	644, 1018, 1547, 1792, 1894, 1958, 1992
FaqI	GGGAC	3 cut(s)	41, 328, 730
FatI	CATG	7 cut(s)	640, 1014, 1543, 1788, 1890, 1954, 1988
FauI	CCCGC	5 cut(s)	119, 342, 388, 392, 481
FauNDI	CATATG	1 cut(s)	832
FbaI	TGATCA	2 cut(s)	976, 1887
FblI	GTMKAC	3 cut(s)	294, 996, 1675
FokI	GGATG	4 cut(s)	524, 1184, 1323, 1824
FriOI	GRGCYC	2 cut(s)	560, 1492
FspBI	CTAG	2 cut(s)	1092, 1808
GlaI	GCGC	5 cut(s)	230, 756, 1910, 1964, 1972
GsaI	CCCAGC	1 cut(s)	90
GsuI	CTGGAG	2 cut(s)	199, 551
HaeII	RGCGCY	3 cut(s)	232, 1912, 1966
HapII	CCGG	9 cut(s)	65, 82, 359, 496, 561, 1061, 1067, 1572, 1984
HgaI	GACGC	6 cut(s)	305, 330, 746, 846, 1171, 1661
HhaI	GCGC	5 cut(s)	231, 757, 1911, 1965, 1973
Hin1I	GRCGYC	2 cut(s)	297, 341
Hin1II	CATG	7 cut(s)	644, 1018, 1547, 1792, 1894, 1958, 1992
Hin6I	GCGC	5 cut(s)	229, 755, 1909, 1963, 1971
HinP1I	GCGC	5 cut(s)	229, 755, 1909, 1963, 1971
HincII	GTYRAC	5 cut(s)	295, 355, 997, 1186, 1676
HindII	GTYRAC	5 cut(s)	295, 355, 997, 1186, 1676
HindIII	AAGCTT	2 cut(s)	139, 956
HpaII	CCGG	9 cut(s)	65, 82, 359, 496, 561, 1061, 1067, 1572, 1984
HphI	GGTGA	8 cut(s)	154, 196, 674, 772, 954, 1586, 1914, 1970
Hpy166II	GTNNAC	6 cut(s)	295, 355, 997, 1186, 1334, 1676
Hpy188III	TCNNGA	9 cut(s)	216, 530, 575, 861, 1067, 1340, 1445, 1789, 1867
Hpy8I	GTNNAC	6 cut(s)	295, 355, 997, 1186, 1334, 1676
Hpy99I	CGWCG	9 cut(s)	9, 53, 56, 251, 299, 373, 998, 1102, 1677
HpyAV	CCTTC	7 cut(s)	403, 605, 838, 1095, 1538, 1935, 1969
HpyCH4III	ACNGT	2 cut(s)	797, 1001
HpyCH4IV	ACGT	3 cut(s)	276, 993, 1435
HpyF3I	CTNAG	4 cut(s)	711, 874, 1967, 2031
HpySE526I	ACGT	3 cut(s)	276, 993, 1435
Hsp92I	GRCGYC	2 cut(s)	297, 341
Hsp92II	CATG	7 cut(s)	644, 1018, 1547, 1792, 1894, 1958, 1992
HspAI	GCGC	5 cut(s)	229, 755, 1909, 1963, 1971
Kpn2I	TCCGGA	1 cut(s)	1066
Ksp22I	TGATCA	2 cut(s)	976, 1887
KspI	CCGCGG	1 cut(s)	1107
LmnI	GCTCC	9 cut(s)	78, 218, 412, 555, 563, 1069, 1132, 1495, 1906
LweI	GCATC	1 cut(s)	1419
MaeI	CTAG	2 cut(s)	1092, 1808
MaeII	ACGT	3 cut(s)	276, 993, 1435
MaeIII	GTNAC	4 cut(s)	160, 778, 797, 1555
MbiI	CCGCTC	1 cut(s)	1616
MboII	GAAGA	8 cut(s)	97, 190, 193, 685, 800, 942, 1721, 1882
MfeI	CAATTG	1 cut(s)	678
MflI	RGATCY	5 cut(s)	61, 382, 910, 1765, 1783
MhlI	GDGCHC	4 cut(s)	131, 266, 560, 1492
MlsI	TGGCCA	2 cut(s)	482, 819
MluCI	AATT	8 cut(s)	220, 304, 678, 1189, 1287, 1419, 1515, 1898
MluNI	TGGCCA	2 cut(s)	482, 819
MlyI	GAGTC	4 cut(s)	300, 529, 542, 956
MmeI	TCCRAC	2 cut(s)	503, 751
Mox20I	TGGCCA	2 cut(s)	482, 819
Mph1103I	ATGCAT	1 cut(s)	1549
MroI	TCCGGA	1 cut(s)	1066
MroXI	GAANNNNTTC	1 cut(s)	888
MscI	TGGCCA	2 cut(s)	482, 819
MseI	TTAA	3 cut(s)	567, 1041, 1514
MslI	CAYNNNNRTG	1 cut(s)	1341
Msp20I	TGGCCA	2 cut(s)	482, 819
MspA1I	CMGCKG	2 cut(s)	1106, 1508
MspI	CCGG	9 cut(s)	65, 82, 359, 496, 561, 1061, 1067, 1572, 1984
MspR9I	CCNGG	7 cut(s)	359, 360, 562, 1061, 1169, 1311, 1984
MunI	CAATTG	1 cut(s)	678
Mva1269I	GAATGC	1 cut(s)	1818
MvaI	CCWGG	2 cut(s)	1169, 1311
MvnI	CGCG	3 cut(s)	757, 1106, 1973
NciI	CCSGG	5 cut(s)	359, 360, 562, 1061, 1984
NcoI	CCATGG	1 cut(s)	1014
NdeI	CATATG	1 cut(s)	832
NlaIII	CATG	7 cut(s)	644, 1018, 1547, 1792, 1894, 1958, 1992
NlaIV	GGNNCC	8 cut(s)	63, 265, 384, 441, 1059, 1065, 1134, 1491
NmuCI	GTSAC	4 cut(s)	160, 778, 797, 1555
NsiI	ATGCAT	1 cut(s)	1549
NspI	RCATGY	1 cut(s)	1547
NspV	TTCGAA	2 cut(s)	224, 1896
PagI	TCATGA	1 cut(s)	1788
PcsI	WCGNNNNNNNCGW	2 cut(s)	1028, 1094
PctI	GAATGC	1 cut(s)	1818
PdmI	GAANNNNTTC	1 cut(s)	888
PfeI	GAWTC	7 cut(s)	270, 526, 836, 1141, 1568, 1773, 1979
PleI	GAGTC	4 cut(s)	299, 528, 541, 955
PmaCI	CACGTG	1 cut(s)	277
PmlI	CACGTG	1 cut(s)	277
PpsI	GAGTC	4 cut(s)	299, 528, 541, 955
Ppu21I	YACGTR	1 cut(s)	277
PpuMI	RGGWCCY	1 cut(s)	1057
Psp124BI	GAGCTC	1 cut(s)	560
Psp5II	RGGWCCY	1 cut(s)	1057
Psp6I	CCWGG	2 cut(s)	1167, 1309
PspCI	CACGTG	1 cut(s)	277
PspFI	CCCAGC	1 cut(s)	86
PspGI	CCWGG	2 cut(s)	1167, 1309
PspN4I	GGNNCC	8 cut(s)	63, 265, 384, 441, 1059, 1065, 1134, 1491
PspPI	GGNCC	7 cut(s)	84, 490, 1011, 1057, 1525, 1653, 1800
PspPPI	RGGWCCY	1 cut(s)	1057
PstI	CTGCAG	2 cut(s)	1699, 1758
PstNI	CAGNNNCTG	2 cut(s)	605, 1444
PsuI	RGATCY	5 cut(s)	61, 382, 910, 1765, 1783
RsaI	GTAC	5 cut(s)	259, 287, 992, 1841, 2002
RsaNI	GTAC	5 cut(s)	258, 286, 991, 1840, 2001
RseI	CAYNNNNRTG	1 cut(s)	1341
SacI	GAGCTC	1 cut(s)	560
SacII	CCGCGG	1 cut(s)	1107
SalI	GTCGAC	3 cut(s)	293, 995, 1674
SaqAI	TTAA	3 cut(s)	567, 1041, 1514
Sau96I	GGNCC	7 cut(s)	84, 490, 1011, 1057, 1525, 1653, 1800
ScaI	AGTACT	1 cut(s)	2002
SchI	GAGTC	4 cut(s)	300, 529, 542, 956
ScrFI	CCNGG	7 cut(s)	359, 360, 562, 1061, 1169, 1311, 1984
SduI	GDGCHC	4 cut(s)	131, 266, 560, 1492
SfaNI	GCATC	1 cut(s)	1419
SfcI	CTRYAG	3 cut(s)	793, 1695, 1754
Sfr303I	CCGCGG	1 cut(s)	1107
SfuI	TTCGAA	2 cut(s)	224, 1896
SgrBI	CCGCGG	1 cut(s)	1107
SinI	GGWCC	1 cut(s)	1057
SmaI	CCCGGG	1 cut(s)	360
SmiMI	CAYNNNNRTG	1 cut(s)	1341
SmlI	CTYRAG	1 cut(s)	1223
SmoI	CTYRAG	1 cut(s)	1223
Sse9I	AATT	8 cut(s)	220, 304, 678, 1189, 1287, 1419, 1515, 1898
SspMI	CTAG	2 cut(s)	1092, 1808
SstI	GAGCTC	1 cut(s)	560
StyD4I	CCNGG	7 cut(s)	357, 358, 560, 1059, 1167, 1309, 1982
StyI	CCWWGG	3 cut(s)	429, 646, 1014
TaaI	ACNGT	2 cut(s)	797, 1001
TaiI	ACGT	3 cut(s)	279, 996, 1438
TaqI	TCGA	8 cut(s)	224, 246, 294, 318, 996, 1612, 1675, 1896
TaqII	GACCGA	1 cut(s)	1088
TasI	AATT	8 cut(s)	220, 304, 678, 1189, 1287, 1419, 1515, 1898
TatI	WGTACW	1 cut(s)	2000
TauI	GCSGC	8 cut(s)	255, 302, 1030, 1049, 1109, 1161, 1218, 1619
TfiI	GAWTC	7 cut(s)	270, 526, 836, 1141, 1568, 1773, 1979
Tru1I	TTAA	3 cut(s)	567, 1041, 1514
Tru9I	TTAA	3 cut(s)	567, 1041, 1514
TscAI	CASTG	4 cut(s)	458, 1056, 1324, 1802
TseFI	GTSAC	4 cut(s)	160, 778, 797, 1555
Tsp45I	GTSAC	4 cut(s)	160, 778, 797, 1555
TspDTI	ATGAA	6 cut(s)	800, 849, 924, 1359, 1765, 1805
TspGWI	ACGGA	4 cut(s)	148, 303, 479, 1439
TspMI	CCCGGG	1 cut(s)	358
TspRI	CASTG	4 cut(s)	458, 1056, 1324, 1802
VpaK11BI	GGWCC	1 cut(s)	1057
XapI	RAATTY	2 cut(s)	220, 1287
XceI	RCATGY	1 cut(s)	1547
XmaI	CCCGGG	1 cut(s)	358
XmiI	GTMKAC	3 cut(s)	294, 996, 1675
XmnI	GAANNNNTTC	1 cut(s)	888
XspI	CTAG	2 cut(s)	1092, 1808
ZrmI	AGTACT	1 cut(s)	2002
Zsp2I	ATGCAT	1 cut(s)	1549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.