Rh4DG379100

Belongs to the GDA1 CD39 NTPase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
59715199 .. 59718031
2833 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG379100.1

Sequence Viewer

Length: 1257 bp
ATGCGACGACTGCACGCCCGTAAAGGGGACACCAGTTCTAAACCTACCGACGACGATATGGATCCGGTCAAGCTCCAAATCCGGCCCAGCTCCCGATCCAATCTCTTCTCCCGCAGCCCCAAGCAGAGCACCAGATCAAGCTTCGTAATCCTCGCCTCCGTCACCATCGCCACCGCTTTCGTCCTCTGCTATCTCCTCTTCTTCACCAGAAACTCCAGAAATTCGAAGCGCTACGGGATTGTGATCGACGGCGGCAGTACGGGCACCCGAATCCACGTGTTCGGGTACGGAGTCGACGCCGCCAATTCCGCCGTGTTCGACTTCGGCAAGGACGGGTTGGCGTCGCTGCGGGTCAACCCGGGGCTGTCGTCGTTTGCGGAGGATCCGAAAGCTGCAGGCGGGTCGTTGAAGGAGCTTATTGAGTTTGCCAAGGGGAGGGTTCCGAAGCAGCAGTGGGGGAACACGGAGGTTCGGCTTATGGCCACGGCGGGCCTCCGGCTGCTGGATTTGGATGTTCAGAGTCGGATTCTAGAGTCTTGCAGAAAGGTGTTGAGGAGCTCCGGGTTTAAGTTTCAGGACGAGTGGGCTTCAGTCATTACAGGTTCTGACGAAGGACTATATGCGTGGGTTGTTGCAAACCATGCCCTTGGAACTCTTGGTGGTGATCCTCTGAAGACAATTGGGATTATTGAACTTGGCGGCGCTTCTGCTCAGGTGACATTTGTTTCAAGTGAGCCAATGCCTCCGCAGTTTGCGCGTCCTGTCAAAGTTGGAAATGTCACCTACAATCTCTACAGTCACAGCTTTCTTCATTATGGCCAGAATGTTGCATATGAATCGTTGAAGGAAGCACTTGCGTCAGGAGACTTCAGCTCAGCTTCAGAAGCACTTCAGAATAGAATGATAATAGATCCTTGCACTCCTAAAGGATATTCATATAAAATGGAGTCTTCAAAGCTTTCACCAAGTTCGTTGGGTGAGAAGAATGAATATTTATCTGCGCTGCAATCGAGGGGCAACTTTTCTGAGTGCAGATCTGCTGCAAACATGATGTTGCAAAAAGGAAAAGATAAATGTTTATATCAACCCTGCAATATAGGATCAACTTTCACACCAAAGCTTCAGGGGAAGTTTCTGGCTACAGAAAATTTCTTTCACACATCCAAGGTTTTATCCTCTCCATGCTTCAGCATCATCAGTTTATTAAGTATTAATTTGTTAAGCAATTTTGATCTAATTTTCATTTGGGGGAAGTAA

Protein Analysis

418

Amino Acids

45.71

Weight (kDa)

9.3

Isoelectric Point (pI)

46.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 72 - 392 1.9e-66 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 263
AccI GTMKAC 1 cut(s) 294
AccII CGCG 1 cut(s) 757
AclWI GGATC 8 cut(s) 56, 69, 90, 377, 390, 659, 905, 1108
AcoI YGGCCR 2 cut(s) 480, 817
AcsI RAATTY 2 cut(s) 220, 1147
AcuI CTGAAG 7 cut(s) 573, 692, 853, 864, 875, 1106, 1171
AcvI CACGTG 1 cut(s) 277
AcyI GRCGYC 2 cut(s) 297, 341
AfaI GTAC 2 cut(s) 259, 287
AfeI AGCGCT 1 cut(s) 230
AfiI CCNNNNNNNGG 4 cut(s) 24, 25, 435, 502
AflIII ACRYGT 1 cut(s) 276
AgsI TTSAA 5 cut(s) 409, 692, 729, 844, 954
Alw21I GWGCWC 2 cut(s) 131, 560
Alw26I GTCTC 1 cut(s) 858
AlwI GGATC 8 cut(s) 56, 69, 90, 377, 390, 659, 905, 1108
AlwNI CAGNNNCTG 1 cut(s) 605
Ama87I CYCGRG 1 cut(s) 358
Aor51HI AGCGCT 1 cut(s) 230
AoxI GGCC 4 cut(s) 83, 480, 490, 817
ApeKI GCWGC 7 cut(s) 114, 346, 392, 448, 499, 1003, 1040
ApoI RAATTY 2 cut(s) 220, 1147
AseI ATTAAT 1 cut(s) 1212
Asp700I GAANNNNTTC 1 cut(s) 888
AspLEI GCGC 4 cut(s) 231, 704, 757, 1003
AspS9I GGNCC 2 cut(s) 84, 490
AsuC2I CCSGG 3 cut(s) 359, 360, 562
AsuHPI GGTGA 7 cut(s) 154, 196, 674, 727, 772, 954, 989
AsuII TTCGAA 1 cut(s) 224
AvaI CYCGRG 1 cut(s) 358
BaeGI GKGCMC 1 cut(s) 266
BalI TGGCCA 2 cut(s) 482, 819
BamHI GGATCC 2 cut(s) 61, 382
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 1 cut(s) 560
BbrPI CACGTG 1 cut(s) 277
BbsI GAAGAC 2 cut(s) 680, 942
Bbv12I GWGCWC 2 cut(s) 131, 560
BbvI GCAGC 7 cut(s) 126, 333, 379, 460, 486, 990, 1027
BccI CCATC 1 cut(s) 173
BceAI ACGGC 3 cut(s) 265, 296, 501
BcgI CGANNNNNNTGC 4 cut(s) 384, 418, 819, 853
BcnI CCSGG 3 cut(s) 359, 360, 562
BcoDI GTCTC 1 cut(s) 858
BfaI CTAG 1 cut(s) 530
BfmI CTRYAG 3 cut(s) 393, 793, 1140
BfoI RGCGCY 2 cut(s) 232, 705
BglII AGATCT 1 cut(s) 1034
BlpI GCTNAGC 1 cut(s) 874
Bme1390I CCNGG 3 cut(s) 359, 360, 562
BmeT110I CYCGRG 1 cut(s) 358
BmgT120I GGNCC 2 cut(s) 84, 490
BmiI GGNNCC 4 cut(s) 63, 265, 384, 441
BmrFI CCNGG 3 cut(s) 359, 360, 562
BmsI GCATC 1 cut(s) 1200
BpiI GAAGAC 2 cut(s) 680, 942
BpmI CTGGAG 1 cut(s) 199
Bpu10I CCTNAGC 1 cut(s) 711
Bpu1102I GCTNAGC 1 cut(s) 874
Bpu14I TTCGAA 1 cut(s) 224
BpuMI CCSGG 3 cut(s) 359, 360, 562
BsaAI YACGTR 1 cut(s) 277
BsaBI GATNNNNATC 2 cut(s) 60, 242
BsaHI GRCGYC 2 cut(s) 297, 341
BsaJI CCNNGG 6 cut(s) 358, 359, 429, 483, 646, 1164
BsaWI WCCGGW 1 cut(s) 64
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 25, 435, 502
Bse1I ACTGG 1 cut(s) 33
Bse8I GATNNNNATC 2 cut(s) 60, 242
BseDI CCNNGG 6 cut(s) 358, 359, 429, 483, 646, 1164
BseGI GGATG 2 cut(s) 517, 1160
BseJI GATNNNNATC 2 cut(s) 60, 242
BseLI CCNNNNNNNGG 4 cut(s) 24, 25, 435, 502
BseMII CTCAG 3 cut(s) 725, 888, 1017
BseNI ACTGG 1 cut(s) 33
BseRI GAGGAG 2 cut(s) 185, 568
BseSI GKGCMC 1 cut(s) 266
BseXI GCAGC 7 cut(s) 126, 333, 379, 460, 486, 990, 1027
BseYI CCCAGC 1 cut(s) 86
BsgI GTGCAG 1 cut(s) 1051
Bsh1236I CGCG 1 cut(s) 757
BshFI GGCC 4 cut(s) 85, 482, 492, 819
BshNI GGYRCC 1 cut(s) 263
BsiHKAI GWGCWC 2 cut(s) 131, 560
BsiHKCI CYCGRG 1 cut(s) 358
BsiSI CCGG 5 cut(s) 65, 82, 359, 496, 561
BslFI GGGAC 1 cut(s) 41
BslI CCNNNNNNNGG 4 cut(s) 24, 25, 435, 502
BsmAI GTCTC 1 cut(s) 858
BsmFI GGGAC 1 cut(s) 41
BsnI GGCC 4 cut(s) 85, 482, 492, 819
BsoBI CYCGRG 1 cut(s) 358
Bsp119I TTCGAA 1 cut(s) 224
Bsp1286I GDGCHC 3 cut(s) 131, 266, 560
Bsp1720I GCTNAGC 1 cut(s) 874
BspANI GGCC 4 cut(s) 85, 482, 492, 819
BspCNI CTCAG 3 cut(s) 724, 887, 1018
BspFNI CGCG 1 cut(s) 757
BspLI GGNNCC 4 cut(s) 63, 265, 384, 441
BspMAI CTGCAG 1 cut(s) 397
BspPI GGATC 8 cut(s) 56, 69, 90, 377, 390, 659, 905, 1108
BspT104I TTCGAA 1 cut(s) 224
BspT107I GGYRCC 1 cut(s) 263
BsrI ACTGG 1 cut(s) 33
BssECI CCNNGG 6 cut(s) 358, 359, 429, 483, 646, 1164
BssNI GRCGYC 2 cut(s) 297, 341
BssT1I CCWWGG 3 cut(s) 429, 646, 1164
Bst4CI ACNGT 1 cut(s) 797
Bst6I CTCTTC 2 cut(s) 110, 203
BstACI GRCGYC 2 cut(s) 297, 341
BstAPI GCANNNNNTGC 1 cut(s) 641
BstBAI YACGTR 1 cut(s) 277
BstBI TTCGAA 1 cut(s) 224
BstC8I GCNNGC 3 cut(s) 15, 397, 490
BstDEI CTNAG 3 cut(s) 711, 874, 1026
BstDSI CCRYGG 1 cut(s) 483
BstF5I GGATG 2 cut(s) 517, 1160
BstFNI CGCG 1 cut(s) 757
BstH2I RGCGCY 2 cut(s) 232, 705
BstHHI GCGC 4 cut(s) 231, 704, 757, 1003
BstMAI GTCTC 1 cut(s) 858
BstMWI GCNNNNNNNGC 6 cut(s) 10, 261, 308, 641, 754, 884
BstSCI CCNGG 3 cut(s) 357, 358, 560
BstSFI CTRYAG 3 cut(s) 393, 793, 1140
BstSLI GKGCMC 1 cut(s) 266
BstUI CGCG 1 cut(s) 757
BstV1I GCAGC 7 cut(s) 126, 333, 379, 460, 486, 990, 1027
BstV2I GAAGAC 2 cut(s) 680, 942
BstX2I RGATCY 4 cut(s) 61, 382, 910, 1034
BstXI CCANNNNNNTGG 1 cut(s) 647
BstYI RGATCY 4 cut(s) 61, 382, 910, 1034
BsuRI GGCC 4 cut(s) 85, 482, 492, 819
BtgI CCRYGG 1 cut(s) 483
BtgZI GCGATG 1 cut(s) 151
BtsCI GGATG 2 cut(s) 517, 1160
BtsI GCAGTG 1 cut(s) 458
BtsIMutI CAGTG 1 cut(s) 458
Cac8I GCNNGC 3 cut(s) 15, 397, 490
CaiI CAGNNNCTG 1 cut(s) 605
CfoI GCGC 4 cut(s) 231, 704, 757, 1003
Cfr13I GGNCC 2 cut(s) 84, 490
Cfr9I CCCGGG 1 cut(s) 358
CseI GACGC 4 cut(s) 305, 330, 746, 846
Csp6I GTAC 2 cut(s) 258, 286
CviAII CATG 3 cut(s) 641, 1048, 1182
CviQI GTAC 2 cut(s) 258, 286
DdeI CTNAG 3 cut(s) 711, 874, 1026
EaeI YGGCCR 2 cut(s) 480, 817
Eam1104I CTCTTC 2 cut(s) 110, 203
EarI CTCTTC 2 cut(s) 110, 203
EciI GGCGGA 1 cut(s) 298
Ecl136II GAGCTC 1 cut(s) 558
Eco130I CCWWGG 3 cut(s) 429, 646, 1164
Eco24I GRGCYC 1 cut(s) 560
Eco47III AGCGCT 1 cut(s) 230
Eco53kI GAGCTC 1 cut(s) 558
Eco57I CTGAAG 7 cut(s) 573, 692, 853, 864, 875, 1106, 1171
Eco72I CACGTG 1 cut(s) 277
Eco88I CYCGRG 1 cut(s) 358
EcoICRI GAGCTC 1 cut(s) 558
EcoT14I CCWWGG 3 cut(s) 429, 646, 1164
EcoT38I GRGCYC 1 cut(s) 560
ErhI CCWWGG 3 cut(s) 429, 646, 1164
FaeI CATG 3 cut(s) 644, 1051, 1185
FaqI GGGAC 1 cut(s) 41
FatI CATG 3 cut(s) 640, 1047, 1181
FauI CCCGC 4 cut(s) 119, 342, 392, 481
FauNDI CATATG 1 cut(s) 832
FblI GTMKAC 1 cut(s) 294
FokI GGATG 2 cut(s) 524, 1147
FriOI GRGCYC 1 cut(s) 560
FspBI CTAG 1 cut(s) 530
GlaI GCGC 4 cut(s) 230, 703, 756, 1002
GsaI CCCAGC 1 cut(s) 90
GsuI CTGGAG 1 cut(s) 199
HaeII RGCGCY 2 cut(s) 232, 705
HaeIII GGCC 4 cut(s) 85, 482, 492, 819
HapII CCGG 5 cut(s) 65, 82, 359, 496, 561
HgaI GACGC 4 cut(s) 305, 330, 746, 846
HhaI GCGC 4 cut(s) 231, 704, 757, 1003
Hin1I GRCGYC 2 cut(s) 297, 341
Hin1II CATG 3 cut(s) 644, 1051, 1185
Hin6I GCGC 4 cut(s) 229, 702, 755, 1001
HinP1I GCGC 4 cut(s) 229, 702, 755, 1001
HincII GTYRAC 2 cut(s) 295, 355
HindII GTYRAC 2 cut(s) 295, 355
HindIII AAGCTT 3 cut(s) 139, 956, 1118
HinfI GANTC 7 cut(s) 270, 291, 520, 526, 533, 836, 947
HpaII CCGG 5 cut(s) 65, 82, 359, 496, 561
HphI GGTGA 7 cut(s) 154, 196, 674, 727, 772, 954, 989
Hpy166II GTNNAC 2 cut(s) 295, 355
Hpy188I TCNGA 9 cut(s) 387, 444, 519, 525, 607, 672, 883, 894, 1027
Hpy188III TCNNGA 5 cut(s) 93, 216, 530, 575, 861
Hpy8I GTNNAC 2 cut(s) 295, 355
Hpy99I CGWCG 7 cut(s) 9, 53, 56, 251, 299, 346, 373
HpyAV CCTTC 3 cut(s) 403, 605, 838
HpyCH4III ACNGT 1 cut(s) 797
HpyCH4IV ACGT 1 cut(s) 276
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 261, 308, 641, 754, 884
HpyF3I CTNAG 3 cut(s) 711, 874, 1026
HpySE526I ACGT 1 cut(s) 276
Hsp92I GRCGYC 2 cut(s) 297, 341
Hsp92II CATG 3 cut(s) 644, 1051, 1185
HspAI GCGC 4 cut(s) 229, 702, 755, 1001
LmnI GCTCC 5 cut(s) 78, 95, 412, 555, 563
Lsp1109I GCAGC 7 cut(s) 126, 333, 379, 460, 486, 990, 1027
LweI GCATC 1 cut(s) 1200
MaeI CTAG 1 cut(s) 530
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 4 cut(s) 160, 715, 778, 797
MboII GAAGA 7 cut(s) 97, 190, 193, 685, 800, 942, 994
MfeI CAATTG 1 cut(s) 678
MflI RGATCY 4 cut(s) 61, 382, 910, 1034
MhlI GDGCHC 3 cut(s) 131, 266, 560
MlsI TGGCCA 2 cut(s) 482, 819
MluCI AATT 7 cut(s) 220, 304, 678, 1147, 1213, 1225, 1236
MluNI TGGCCA 2 cut(s) 482, 819
MlyI GAGTC 4 cut(s) 300, 529, 542, 956
MmeI TCCRAC 2 cut(s) 503, 751
Mox20I TGGCCA 2 cut(s) 482, 819
MroXI GAANNNNTTC 1 cut(s) 888
MscI TGGCCA 2 cut(s) 482, 819
MseI TTAA 4 cut(s) 567, 1205, 1212, 1220
Msp20I TGGCCA 2 cut(s) 482, 819
MspI CCGG 5 cut(s) 65, 82, 359, 496, 561
MspR9I CCNGG 3 cut(s) 359, 360, 562
MunI CAATTG 1 cut(s) 678
MvnI CGCG 1 cut(s) 757
MwoI GCNNNNNNNGC 6 cut(s) 10, 261, 308, 641, 754, 884
NciI CCSGG 3 cut(s) 359, 360, 562
NdeI CATATG 1 cut(s) 832
NlaIII CATG 3 cut(s) 644, 1051, 1185
NlaIV GGNNCC 4 cut(s) 63, 265, 384, 441
NmuCI GTSAC 4 cut(s) 160, 715, 778, 797
NspV TTCGAA 1 cut(s) 224
PdmI GAANNNNTTC 1 cut(s) 888
PfeI GAWTC 3 cut(s) 270, 526, 836
PleI GAGTC 4 cut(s) 299, 528, 541, 955
PmaCI CACGTG 1 cut(s) 277
PmlI CACGTG 1 cut(s) 277
PpsI GAGTC 4 cut(s) 299, 528, 541, 955
Ppu21I YACGTR 1 cut(s) 277
PshBI ATTAAT 1 cut(s) 1212
Psp124BI GAGCTC 1 cut(s) 560
PspCI CACGTG 1 cut(s) 277
PspFI CCCAGC 1 cut(s) 86
PspN4I GGNNCC 4 cut(s) 63, 265, 384, 441
PspPI GGNCC 2 cut(s) 84, 490
PstI CTGCAG 1 cut(s) 397
PstNI CAGNNNCTG 1 cut(s) 605
PsuI RGATCY 4 cut(s) 61, 382, 910, 1034
RsaI GTAC 2 cut(s) 259, 287
RsaNI GTAC 2 cut(s) 258, 286
SacI GAGCTC 1 cut(s) 560
SalI GTCGAC 1 cut(s) 293
SaqAI TTAA 4 cut(s) 567, 1205, 1212, 1220
Sau96I GGNCC 2 cut(s) 84, 490
SchI GAGTC 4 cut(s) 300, 529, 542, 956
ScrFI CCNGG 3 cut(s) 359, 360, 562
SduI GDGCHC 3 cut(s) 131, 266, 560
SfaNI GCATC 1 cut(s) 1200
SfcI CTRYAG 3 cut(s) 393, 793, 1140
SfuI TTCGAA 1 cut(s) 224
SmaI CCCGGG 1 cut(s) 360
Sse9I AATT 7 cut(s) 220, 304, 678, 1147, 1213, 1225, 1236
SspI AATATT 1 cut(s) 992
SspMI CTAG 1 cut(s) 530
SstI GAGCTC 1 cut(s) 560
StyD4I CCNGG 3 cut(s) 357, 358, 560
StyI CCWWGG 3 cut(s) 429, 646, 1164
TaaI ACNGT 1 cut(s) 797
TaiI ACGT 1 cut(s) 279
TaqI TCGA 5 cut(s) 224, 246, 294, 318, 1010
TasI AATT 7 cut(s) 220, 304, 678, 1147, 1213, 1225, 1236
TauI GCSGC 3 cut(s) 255, 302, 702
TfiI GAWTC 3 cut(s) 270, 526, 836
Tru1I TTAA 4 cut(s) 567, 1205, 1212, 1220
Tru9I TTAA 4 cut(s) 567, 1205, 1212, 1220
TscAI CASTG 1 cut(s) 458
TseFI GTSAC 4 cut(s) 160, 715, 778, 797
TseI GCWGC 7 cut(s) 114, 346, 392, 448, 499, 1003, 1040
Tsp45I GTSAC 4 cut(s) 160, 715, 778, 797
TspDTI ATGAA 5 cut(s) 800, 849, 924, 1002, 1231
TspGWI ACGGA 3 cut(s) 148, 303, 479
TspMI CCCGGG 1 cut(s) 358
TspRI CASTG 1 cut(s) 458
VspI ATTAAT 1 cut(s) 1212
XapI RAATTY 2 cut(s) 220, 1147
XbaI TCTAGA 1 cut(s) 529
XmaI CCCGGG 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 294
XmnI GAANNNNTTC 1 cut(s) 888
XspI CTAG 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.