Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000083.1

Orthogroup ID

OG0010340

Physical Location & Seq

Genomic Coordinates Forward (+)

133539 .. 140483

Gene Structure 6945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

atggtgaaccggtggaatatttgctgcgagttgtatggagctttcggtggccggttcggtaggtttcctgccggttcttgtggttgggcgccggttctggattcctgggatcgagttcttcaaggtgtgagtggtggaggcgtgaggcttggttggcagcgacatcagggacttggattggtggagctgtgctgttgtgcgtgcgatgatctgcgcggaggagacgttgctgagcctgagataaacaattctgttccaaagttcaaaaccccgtctctgtattcaggcatctgtccgcatttcacatcaactctcaactatccagacctcctcccattttccccagaactgattccgatcaccgtcaaccacatccaaaccctcacaccccaatccaatcctcaccgttcaccaatggatccggttcttccaatcgcggtcctctccgtcctcatcggcgccgtcattgccctcgccttcttcggcagctacttccgcaagcggagctccgaagtcgagtccatttccaaaccggagctccacgccgatcagaaaaagcaaccggccaagcccgcccagcataagaagtcccacgccaagcctcactctgataaggatcacaacaagaagcaccatccgttggatgtgaatacgttgaaaggtcatggagattccgttgatggactgtgtttttctccggatggacggagtttggctacagcttgtgcggatggagtggtcagggtatttaagttggatgatgcttcaagtaaaagtttcaaatttctgaaaataaatacgccagttggtggtcctccagtagcagtttcattttctgatgatgcatcgtccttagttgtcgcttcccaaaatctttctggcgcttctttgtacatgtacggtggagtggaaaaacccaaaatttctaatgaatccggtcagccatccaaggttcctctcccagaaataaagtgggaacatcacaaaattcatgagaaattaggtattctcaccttatttgggaccactgcaagttatggcactgctgatgggagtgcaattattgcttcttgttctgaaggtactgacatcataatttggcatggtaaaactggcaagaacttggggcatgttgacacaaatcagttgaaaaacaacatggctgctatatcaccaaatggacgtttcattgctgcagcagcttttactgcagatgtgaaggtatgggagatcgtatattcaaaggatggatcggtcaaggaggtttcaaaagccatgcaacttaaagggcataagagtgcagtgacttggttatgctttactccagactcggaacaaattatcacagcctcaaaagatggttcgataagaatttggaatatcaatgttcgatatcatatggatgaggatccaaaaactctcaaggtgtttcctattccacttggtggtgctagcccccactatgatcgtcttagtttatctcctgatggaaaaatcttggcggcaacccatggttcaacattgcagtggttatgcgttgaaactggagaggttttggacacggctgacaaagcccatgaagattttatcacatgcattgcatgggcaccacaggctatgccaatgggtgatgagaaagtattaattttggcaacagcaagtgtagataaaaaggttaaattctgggctgctccatccctcaatgcatcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0009267 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010033 GO:0012505 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030968 GO:0031369 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0036293 GO:0036294 GO:0042149 GO:0042221 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051219 GO:0051716 GO:0065007 GO:0070482 GO:0070887 GO:0071310 GO:0071453 GO:0071456 GO:0071496

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

570

Amino Acids

61.59

Weight (kDa)

7.6

Isoelectric Point (pI)

38.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	214 - 327	1.4e-07	THOC3 beta-propeller domain
WD40	PF00400	216 - 250	9.2e-08	WD domain, G-beta repeat
WD40_Prp19	PF24814	216 - 292	2e-06	Prp19 WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	317 - 462	2.1e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_EML_2	PF23414	348 - 467	5.9e-09	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	352 - 463	2.5e-06	G protein beta WD-40 repeat protein
Beta-prop_WDR5	PF25175	353 - 462	2.1e-13	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	354 - 463	5.8e-08	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	359 - 461	3.5e-13	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	362 - 459	5.4e-07	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	388 - 463	6.8e-11	THOC3 beta-propeller domain
WDR55	PF24796	389 - 463	6.5e-06	WDR55
WD40_WDHD1_1st	PF24817	419 - 562	4.5e-13	WDHD1 first WD40 domain
WD40	PF00400	427 - 460	2.7e-09	WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd	PF25168	427 - 506	1.2e-06	WDR36/Utp21 second beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010340)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00090
fragaria_vesca	FvH4_7g11840 FvH4_7g11840 FvH4_7g11840 FvH4_7g11840
malus_domestica	MD02G1204700.v1.1 MD07G1121300.v1.1
prunus_persica	Prupe.2G145000_v2.0.a1
pyrus_communis	pycom02g16680 pycom07g10320
rosa_chinensis	RchiOBHm_Chr1g0350521
rosa_laevigata	RLG00000028479
rosa_multiflora	Rmu_sc0020900.1_g000001 Rmu_ssc0000083.1_g000024
rosa_roxburghii	Rroxscaffold_4G00304790
rosa_rugosa	Rorug01G0211700
rosa_samantha	Rh1AG226400 Rh1BG194800 Rh1CG211200 Rh1DG223000
rosa_wichuraiana	Rw1G019550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	88, 458, 1606
AccB7I	CCANNNNNTGG	3 cut(s)	640, 809, 1445
AccII	CGCG	2 cut(s)	216, 437
AccIII	TCCGGA	1 cut(s)	697
AciI	CCGC	8 cut(s)	216, 296, 437, 496, 502, 573, 728, 1502
AclWI	GGATC	7 cut(s)	117, 413, 426, 624, 1258, 1403, 1416
AcoI	YGGCCR	2 cut(s)	49, 564
AcsI	RAATTY	5 cut(s)	782, 921, 987, 1371, 1679
AcuI	CTGAAG	1 cut(s)	1098
AcyI	GRCGYC	2 cut(s)	89, 459
AdeI	CACNNNGTG	1 cut(s)	1445
AfaI	GTAC	3 cut(s)	893, 899, 1084
AfiI	CCNNNNNNNGG	4 cut(s)	640, 809, 1020, 1445
AflIII	ACRYGT	1 cut(s)	894
AgeI	ACCGGT	1 cut(s)	9
AjnI	CCWGG	1 cut(s)	104
AluBI	AGCT	7 cut(s)	41, 187, 489, 507, 538, 722, 1202
AluI	AGCT	7 cut(s)	41, 187, 489, 507, 538, 722, 1202
Alw21I	GWGCWC	2 cut(s)	509, 540
Alw26I	GTCTC	2 cut(s)	216, 279
AlwI	GGATC	7 cut(s)	117, 413, 426, 624, 1258, 1403, 1416
Aor13HI	TCCGGA	1 cut(s)	697
AoxI	GGCC	2 cut(s)	49, 564
ApeKI	GCWGC	8 cut(s)	24, 157, 486, 1163, 1193, 1196, 1199, 1688
ApoI	RAATTY	5 cut(s)	782, 921, 987, 1371, 1679
AseI	ATTAAT	1 cut(s)	1643
AsiGI	ACCGGT	1 cut(s)	9
Asp700I	GAANNNNTTC	1 cut(s)	351
AspLEI	GCGC	4 cut(s)	91, 216, 461, 884
AspS9I	GGNCC	3 cut(s)	439, 812, 1023
AsuHPI	GGTGA	7 cut(s)	16, 352, 395, 402, 1003, 1164, 1640
AsuNHI	GCTAGC	1 cut(s)	1451
AvaII	GGWCC	3 cut(s)	439, 812, 1023
BaeGI	GKGCMC	1 cut(s)	1609
BamHI	GGATCC	2 cut(s)	418, 1408
BanI	GGYRCC	3 cut(s)	88, 458, 1606
BanII	GRGCYC	2 cut(s)	509, 540
Bbv12I	GWGCWC	2 cut(s)	509, 540
BbvI	GCAGC	8 cut(s)	11, 169, 498, 1150, 1180, 1208, 1211, 1675
BceAI	ACGGC	2 cut(s)	446, 1578
BciT130I	CCWGG	1 cut(s)	106
BcoDI	GTCTC	2 cut(s)	216, 279
BfaI	CTAG	1 cut(s)	1452
BfmI	CTRYAG	3 cut(s)	717, 1194, 1209
BfoI	RGCGCY	3 cut(s)	92, 462, 885
BisI	GCNGC	9 cut(s)	25, 158, 487, 1164, 1194, 1197, 1200, 1503, 1689
BlpI	GCTNAGC	1 cut(s)	231
BlsI	GCNGC	9 cut(s)	26, 159, 488, 1165, 1195, 1198, 1201, 1504, 1690
Bme1390I	CCNGG	1 cut(s)	106
Bme18I	GGWCC	3 cut(s)	439, 812, 1023
BmgT120I	GGNCC	3 cut(s)	439, 812, 1023
BmiI	GGNNCC	7 cut(s)	90, 420, 460, 954, 1024, 1410, 1608
BmrFI	CCNGG	1 cut(s)	106
BmsI	GCATC	4 cut(s)	297, 751, 832, 854
BmtI	GCTAGC	1 cut(s)	1455
BpmI	CTGGAG	3 cut(s)	801, 1308, 1566
Bpu1102I	GCTNAGC	1 cut(s)	231
BpuEI	CTTGAG	1 cut(s)	1406
BsaBI	GATNNNNATC	3 cut(s)	356, 615, 1407
BsaHI	GRCGYC	2 cut(s)	89, 459
BsaJI	CCNNGG	3 cut(s)	105, 948, 1510
BsaWI	WCCGGW	5 cut(s)	9, 421, 532, 697, 935
BsaXI	ACNNNNNCTCC	6 cut(s)	210, 240, 522, 552, 660, 690
Bsc4I	CCNNNNNNNGG	4 cut(s)	640, 809, 1020, 1445
Bse118I	RCCGGY	5 cut(s)	9, 51, 71, 91, 562
Bse1I	ACTGG	4 cut(s)	803, 818, 1117, 1549
Bse3DI	GCAATG	4 cut(s)	465, 1188, 1520, 1596
Bse8I	GATNNNNATC	3 cut(s)	356, 615, 1407
BseAI	TCCGGA	1 cut(s)	697
BseBI	CCWGG	1 cut(s)	106
BseDI	CCNNGG	3 cut(s)	105, 948, 1510
BseJI	GATNNNNATC	3 cut(s)	356, 615, 1407
BseLI	CCNNNNNNNGG	4 cut(s)	640, 809, 1020, 1445
BseMI	GCAATG	4 cut(s)	465, 1188, 1520, 1596
BseMII	CTCAG	2 cut(s)	222, 228
BseNI	ACTGG	4 cut(s)	803, 818, 1117, 1549
BseRI	GAGGAG	2 cut(s)	234, 320
BseSI	GKGCMC	1 cut(s)	1609
BseXI	GCAGC	8 cut(s)	11, 169, 498, 1150, 1180, 1208, 1211, 1675
BseYI	CCCAGC	1 cut(s)	576
BsgI	GTGCAG	1 cut(s)	1320
Bsh1236I	CGCG	2 cut(s)	216, 437
BshFI	GGCC	2 cut(s)	51, 566
BshNI	GGYRCC	3 cut(s)	88, 458, 1606
BshTI	ACCGGT	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	509, 540
BsiSI	CCGG	9 cut(s)	10, 52, 72, 92, 422, 533, 563, 698, 936
BslFI	GGGAC	3 cut(s)	183, 574, 1036
BslI	CCNNNNNNNGG	4 cut(s)	640, 809, 1020, 1445
BsmAI	GTCTC	2 cut(s)	216, 279
BsmBI	CGTCTC	2 cut(s)	216, 279
BsmFI	GGGAC	3 cut(s)	183, 574, 1036
BsnI	GGCC	2 cut(s)	51, 566
Bsp1286I	GDGCHC	3 cut(s)	509, 540, 1609
Bsp13I	TCCGGA	1 cut(s)	697
Bsp1407I	TGTACA	1 cut(s)	891
Bsp1720I	GCTNAGC	1 cut(s)	231
Bsp19I	CCATGG	1 cut(s)	1510
BspACI	CCGC	8 cut(s)	216, 296, 437, 496, 502, 573, 728, 1502
BspANI	GGCC	2 cut(s)	51, 566
BspCNI	CTCAG	2 cut(s)	223, 229
BspEI	TCCGGA	1 cut(s)	697
BspFNI	CGCG	2 cut(s)	216, 437
BspHI	TCATGA	1 cut(s)	991
BspLI	GGNNCC	7 cut(s)	90, 420, 460, 954, 1024, 1410, 1608
BspMAI	CTGCAG	2 cut(s)	1198, 1213
BspOI	GCTAGC	1 cut(s)	1455
BspPI	GGATC	7 cut(s)	117, 413, 426, 624, 1258, 1403, 1416
BspT107I	GGYRCC	3 cut(s)	88, 458, 1606
BsrDI	GCAATG	4 cut(s)	465, 1188, 1520, 1596
BsrFI	RCCGGY	5 cut(s)	9, 51, 71, 91, 562
BsrGI	TGTACA	1 cut(s)	891
BsrI	ACTGG	4 cut(s)	803, 818, 1117, 1549
BssAI	RCCGGY	5 cut(s)	9, 51, 71, 91, 562
BssECI	CCNNGG	3 cut(s)	105, 948, 1510
BssNI	GRCGYC	2 cut(s)	89, 459
BssT1I	CCWWGG	2 cut(s)	948, 1510
Bst2UI	CCWGG	1 cut(s)	106
Bst4CI	ACNGT	4 cut(s)	364, 407, 687, 902
BstACI	GRCGYC	2 cut(s)	89, 459
BstAPI	GCANNNNNTGC	1 cut(s)	1064
BstAUI	TGTACA	1 cut(s)	891
BstC8I	GCNNGC	4 cut(s)	202, 500, 573, 1453
BstDEI	CTNAG	4 cut(s)	231, 237, 853, 1472
BstDSI	CCRYGG	1 cut(s)	1510
BstFNI	CGCG	2 cut(s)	216, 437
BstH2I	RGCGCY	3 cut(s)	92, 462, 885
BstHHI	GCGC	4 cut(s)	91, 216, 461, 884
BstMAI	GTCTC	2 cut(s)	216, 279
BstNI	CCWGG	1 cut(s)	106
BstNSI	RCATGY	3 cut(s)	898, 1133, 1596
BstSCI	CCNGG	1 cut(s)	104
BstSFI	CTRYAG	3 cut(s)	717, 1194, 1209
BstSLI	GKGCMC	1 cut(s)	1609
BstUI	CGCG	2 cut(s)	216, 437
BstV1I	GCAGC	8 cut(s)	11, 169, 498, 1150, 1180, 1208, 1211, 1675
BstX2I	RGATCY	2 cut(s)	418, 1408
BstYI	RGATCY	2 cut(s)	418, 1408
BsuRI	GGCC	2 cut(s)	51, 566
BtgI	CCRYGG	1 cut(s)	1510
BtgZI	GCGATG	1 cut(s)	219
BtsI	GCAGTG	4 cut(s)	1026, 1041, 1308, 1532
BtsIMutI	CAGTG	4 cut(s)	1026, 1041, 1308, 1532
Cac8I	GCNNGC	4 cut(s)	202, 500, 573, 1453
CciI	TCATGA	1 cut(s)	991
CfoI	GCGC	4 cut(s)	91, 216, 461, 884
Cfr10I	RCCGGY	5 cut(s)	9, 51, 71, 91, 562
Cfr13I	GGNCC	3 cut(s)	439, 812, 1023
Csp6I	GTAC	3 cut(s)	892, 898, 1083
CspAI	ACCGGT	1 cut(s)	9
CviQI	GTAC	3 cut(s)	892, 898, 1083
DdeI	CTNAG	4 cut(s)	231, 237, 853, 1472
DinI	GGCGCC	2 cut(s)	90, 460
DraIII	CACNNNGTG	1 cut(s)	1445
EaeI	YGGCCR	2 cut(s)	49, 564
Ecl136II	GAGCTC	2 cut(s)	507, 538
Eco130I	CCWWGG	2 cut(s)	948, 1510
Eco24I	GRGCYC	2 cut(s)	509, 540
Eco32I	GATATC	1 cut(s)	1394
Eco47I	GGWCC	3 cut(s)	439, 812, 1023
Eco53kI	GAGCTC	2 cut(s)	507, 538
Eco57I	CTGAAG	1 cut(s)	1098
EcoICRI	GAGCTC	2 cut(s)	507, 538
EcoRII	CCWGG	1 cut(s)	104
EcoRV	GATATC	1 cut(s)	1394
EcoT14I	CCWWGG	2 cut(s)	948, 1510
EcoT22I	ATGCAT	3 cut(s)	847, 1598, 1708
EcoT38I	GRGCYC	2 cut(s)	509, 540
EgeI	GGCGCC	2 cut(s)	90, 460
EheI	GGCGCC	2 cut(s)	90, 460
ErhI	CCWWGG	2 cut(s)	948, 1510
Esp3I	CGTCTC	2 cut(s)	216, 279
FaqI	GGGAC	3 cut(s)	183, 574, 1036
FauI	CCCGC	1 cut(s)	580
FauNDI	CATATG	1 cut(s)	1398
Fnu4HI	GCNGC	9 cut(s)	25, 158, 487, 1164, 1194, 1197, 1200, 1503, 1689
FriOI	GRGCYC	2 cut(s)	509, 540
Fsp4HI	GCNGC	9 cut(s)	25, 158, 487, 1164, 1194, 1197, 1200, 1503, 1689
FspBI	CTAG	1 cut(s)	1452
GlaI	GCGC	4 cut(s)	90, 215, 460, 883
GluI	GCNGC	9 cut(s)	25, 158, 487, 1164, 1194, 1197, 1200, 1503, 1689
GsaI	CCCAGC	1 cut(s)	580
GsuI	CTGGAG	3 cut(s)	801, 1308, 1566
HaeII	RGCGCY	3 cut(s)	92, 462, 885
HaeIII	GGCC	2 cut(s)	51, 566
HapII	CCGG	9 cut(s)	10, 52, 72, 92, 422, 533, 563, 698, 936
HhaI	GCGC	4 cut(s)	91, 216, 461, 884
Hin1I	GRCGYC	2 cut(s)	89, 459
Hin6I	GCGC	4 cut(s)	89, 214, 459, 882
HinP1I	GCGC	4 cut(s)	89, 214, 459, 882
HincII	GTYRAC	2 cut(s)	367, 1135
HindII	GTYRAC	2 cut(s)	367, 1135
HinfI	GANTC	6 cut(s)	101, 352, 518, 671, 932, 1328
HpaII	CCGG	9 cut(s)	10, 52, 72, 92, 422, 533, 563, 698, 936
HphI	GGTGA	7 cut(s)	16, 352, 395, 402, 1003, 1164, 1640
Hpy166II	GTNNAC	4 cut(s)	7, 367, 410, 1135
Hpy188I	TCNGA	8 cut(s)	357, 511, 552, 610, 789, 838, 1078, 1333
Hpy188III	TCNNGA	6 cut(s)	98, 323, 698, 992, 1325, 1484
Hpy8I	GTNNAC	4 cut(s)	7, 367, 410, 1135
HpyAV	CCTTC	3 cut(s)	487, 1073, 1213
HpyCH4III	ACNGT	4 cut(s)	364, 407, 687, 902
HpyCH4IV	ACGT	3 cut(s)	225, 653, 1183
HpyF3I	CTNAG	4 cut(s)	231, 237, 853, 1472
HpySE526I	ACGT	3 cut(s)	225, 653, 1183
Hsp92I	GRCGYC	2 cut(s)	89, 459
HspAI	GCGC	4 cut(s)	89, 214, 459, 882
KasI	GGCGCC	2 cut(s)	88, 458
Kpn2I	TCCGGA	1 cut(s)	697
LmnI	GCTCC	7 cut(s)	38, 184, 504, 512, 535, 543, 1696
Lsp1109I	GCAGC	8 cut(s)	11, 169, 498, 1150, 1180, 1208, 1211, 1675
LweI	GCATC	4 cut(s)	297, 751, 832, 854
MaeI	CTAG	1 cut(s)	1452
MaeII	ACGT	3 cut(s)	225, 653, 1183
MaeIII	GTNAC	1 cut(s)	1303
MboII	GAAGA	4 cut(s)	110, 419, 472, 1592
MflI	RGATCY	2 cut(s)	418, 1408
MhlI	GDGCHC	3 cut(s)	509, 540, 1609
Mly113I	GGCGCC	2 cut(s)	89, 459
MlyI	GAGTC	2 cut(s)	527, 1322
MmeI	TCCRAC	2 cut(s)	621, 735
Mph1103I	ATGCAT	3 cut(s)	847, 1598, 1708
MroI	TCCGGA	1 cut(s)	697
MroXI	GAANNNNTTC	1 cut(s)	351
MseI	TTAA	4 cut(s)	750, 1284, 1643, 1677
MslI	CAYNNNNRTG	3 cut(s)	1296, 1401, 1525
MspI	CCGG	9 cut(s)	10, 52, 72, 92, 422, 533, 563, 698, 936
MspR9I	CCNGG	1 cut(s)	106
MvaI	CCWGG	1 cut(s)	106
MvnI	CGCG	2 cut(s)	216, 437
NarI	GGCGCC	2 cut(s)	89, 459
NcoI	CCATGG	1 cut(s)	1510
NdeI	CATATG	1 cut(s)	1398
NheI	GCTAGC	1 cut(s)	1451
NlaIV	GGNNCC	7 cut(s)	90, 420, 460, 954, 1024, 1410, 1608
NmuCI	GTSAC	1 cut(s)	1303
NsiI	ATGCAT	3 cut(s)	847, 1598, 1708
NspI	RCATGY	3 cut(s)	898, 1133, 1596
PagI	TCATGA	1 cut(s)	991
PciI	ACATGT	1 cut(s)	894
PdmI	GAANNNNTTC	1 cut(s)	351
PfeI	GAWTC	4 cut(s)	101, 352, 671, 932
PflMI	CCANNNNNTGG	3 cut(s)	640, 809, 1445
PinAI	ACCGGT	1 cut(s)	9
PkrI	GCNGC	9 cut(s)	26, 159, 488, 1165, 1195, 1198, 1201, 1504, 1690
PleI	GAGTC	2 cut(s)	526, 1322
PluTI	GGCGCC	2 cut(s)	92, 462
PpsI	GAGTC	2 cut(s)	526, 1322
PscI	ACATGT	1 cut(s)	894
PshBI	ATTAAT	1 cut(s)	1643
Psp124BI	GAGCTC	2 cut(s)	509, 540
Psp6I	CCWGG	1 cut(s)	104
PspFI	CCCAGC	1 cut(s)	576
PspGI	CCWGG	1 cut(s)	104
PspN4I	GGNNCC	7 cut(s)	90, 420, 460, 954, 1024, 1410, 1608
PspPI	GGNCC	3 cut(s)	439, 812, 1023
PstI	CTGCAG	2 cut(s)	1198, 1213
PsuI	RGATCY	2 cut(s)	418, 1408
RsaI	GTAC	3 cut(s)	893, 899, 1084
RsaNI	GTAC	3 cut(s)	892, 898, 1083
RseI	CAYNNNNRTG	3 cut(s)	1296, 1401, 1525
SacI	GAGCTC	2 cut(s)	509, 540
SaqAI	TTAA	4 cut(s)	750, 1284, 1643, 1677
SatI	GCNGC	9 cut(s)	25, 158, 487, 1164, 1194, 1197, 1200, 1503, 1689
Sau96I	GGNCC	3 cut(s)	439, 812, 1023
SchI	GAGTC	2 cut(s)	527, 1322
ScrFI	CCNGG	1 cut(s)	106
SduI	GDGCHC	3 cut(s)	509, 540, 1609
SfaNI	GCATC	4 cut(s)	297, 751, 832, 854
SfcI	CTRYAG	3 cut(s)	717, 1194, 1209
SfoI	GGCGCC	2 cut(s)	90, 460
SinI	GGWCC	3 cut(s)	439, 812, 1023
SmiMI	CAYNNNNRTG	3 cut(s)	1296, 1401, 1525
SmlI	CTYRAG	1 cut(s)	1421
SmoI	CTYRAG	1 cut(s)	1421
SsiI	CCGC	8 cut(s)	216, 296, 437, 496, 502, 573, 728, 1502
SspDI	GGCGCC	2 cut(s)	88, 458
SspI	AATATT	1 cut(s)	19
SspMI	CTAG	1 cut(s)	1452
SstI	GAGCTC	2 cut(s)	509, 540
StyD4I	CCNGG	1 cut(s)	104
StyI	CCWWGG	2 cut(s)	948, 1510
TaaI	ACNGT	4 cut(s)	364, 407, 687, 902
TaiI	ACGT	3 cut(s)	228, 656, 1186
TaqI	TCGA	4 cut(s)	112, 516, 1364, 1390
TaqII	GACCGA	1 cut(s)	1243
TatI	WGTACW	1 cut(s)	891
TauI	GCSGC	1 cut(s)	1505
TfiI	GAWTC	4 cut(s)	101, 352, 671, 932
Tru1I	TTAA	4 cut(s)	750, 1284, 1643, 1677
Tru9I	TTAA	4 cut(s)	750, 1284, 1643, 1677
TscAI	CASTG	4 cut(s)	1033, 1048, 1308, 1532
TseFI	GTSAC	1 cut(s)	1303
TseI	GCWGC	8 cut(s)	24, 157, 486, 1163, 1193, 1196, 1199, 1688
Tsp45I	GTSAC	1 cut(s)	1303
TspDTI	ATGAA	5 cut(s)	819, 945, 980, 1177, 1593
TspGWI	ACGGA	4 cut(s)	436, 627, 664, 721
TspRI	CASTG	4 cut(s)	1033, 1048, 1308, 1532
Van91I	CCANNNNNTGG	3 cut(s)	640, 809, 1445
VpaK11BI	GGWCC	3 cut(s)	439, 812, 1023
VspI	ATTAAT	1 cut(s)	1643
XapI	RAATTY	5 cut(s)	782, 921, 987, 1371, 1679
XceI	RCATGY	3 cut(s)	898, 1133, 1596
XcmI	CCANNNNNNNNNTGG	2 cut(s)	875, 969
XmnI	GAANNNNTTC	1 cut(s)	351
XspI	CTAG	1 cut(s)	1452
Zsp2I	ATGCAT	3 cut(s)	847, 1598, 1708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.