Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0010340

Physical Location & Seq

Genomic Coordinates Reverse (-)

25417537 .. 25423747

Gene Structure 6211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00304790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGTTTCCTACGGTCGTGGCTTGTGGATGTTCGACGACGTCCGAGGTTTAGTGGTGGAGGCGCGGGGCTTGGTTGGCGGTGACATCATGGATTTGGATCGGTGGAGCCGTGCTGCCGTGCATCTGTCCGCATTTCACATCAATTCTCAACTATCCAGACCTCCTCCCATTTTCCTCAGAACTGATTCCGATCACCGTCAACCACATCCAAACCCCTCACTCCCCAATCCAAATCCTCACCGTTCACCAATGGATCCGGTTCTTCCAATCGCGGTCCTCTCCGTCCTCATCGGCGCCGTCATTGCCCTCGCCTTCTTCGGCAGCTACTTCCGCAAGCGGAGCTCCGAAGTCGAGTCCATTTCCAAACCGGAGCTCCACGCCGATCAGAAAAAGCAACCAGCCAAGCCCGCCCAGCATAAGAAGGCCCACGCCAAGCCTCACTCTGATAAGGATCTCAACAAGAAGCACCATCCGTTGGATGTGAATACGTTGAAAGGTCATGGAGATTCCGTTGATGGACTGTGTTTTTCTCCTGATGGACGGAGTTTGGCTACAGCTTGTGCGGATGGAGTGGTCAGGGTATTCAAGTTGGATGATGCTTCGAGTAAAAGTTTCAAATTTCTGAAAATAAATACGCCAGTTGGTGGTCCTCCAGTAGCAGTTTCATTTTCTGATGATGCATCGTCCTTAGTTGTCGCTTCCCAAAATCTGTCTGGCGCTTCTTTGTACATGTACGGTGGAGTGGAAAAACCCAAAATTTCTAATGAATCCGGTCAGCCATCCAAGGTTCCTCTCCCAGAAATAAAGTGGGAACAGCACAAAATTCATGAGAAATTAGGTATTCTCACCTTATTTGGGACCACTGCAAGTTATGGCACTGCTGATGGGAGTGCAATTATTGCTTCTTGTTCTGAAGGTACTGACATCATAATTTGGCATGGTAAAACTGGCAAGAACTTGGGGCATGTTGACACAAATCAGTTGAAAAACAACATGGCTGCTATATCACCAAATGGACGTTTCATTGCTGCGGCAGCTTTTACTGCAGATGTGAAGGTATGGGAGATCGTATATTCAAAGGATGGATCGGTCAAGGAGGTTTCAAAAGCCATGCAACTTAAAGGGCATAAGAGTGCAGTGACTTGGTTATGCTTTACTCCAGACTCGGAACAAATTATCACAGCCTCAAAAGATGGTTCGATAAGAATTTGGAATATCAATGTTCGATATCATATGGATGAGGATCCAAAAACTCTCAAGGTGTTTCCTATTCCACTTAGTGGTGCTAGCCCCCACTATGATCATCTTAGTATATCTCCTGATGGAAAAATCTTGGCGGCAACCCATGGCTCAACATTGCAGTGGTTATGCGTTGAAACTGGAGAGGTTTTGGACACGGCTGACAAAGCCCATGAAGATTTTATCACATGCATTGCATGGGCACCACAAGCTATGCCAATGGGTGATAAGAAAGTATTAATTTTGGCAACAGCAAGTGTAGATAAAAAGGTTAAATTTTGGGCTGCTCCATCCCTCAATGCATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0009267 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010033 GO:0012505 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030968 GO:0031369 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0036293 GO:0036294 GO:0042149 GO:0042221 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051219 GO:0051716 GO:0065007 GO:0070482 GO:0070887 GO:0071310 GO:0071453 GO:0071456 GO:0071496

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

515

Amino Acids

55.85

Weight (kDa)

8.52

Isoelectric Point (pI)

34.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	160 - 259	2.1e-07	THOC3 beta-propeller domain
WD40	PF00400	161 - 195	7.4e-08	WD domain, G-beta repeat
WD40_Prp19	PF24814	161 - 237	1.5e-06	Prp19 WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	262 - 407	2e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_EML_2	PF23414	293 - 412	4.9e-09	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	296 - 409	1.9e-06	G protein beta WD-40 repeat protein
Beta-prop_WDR5	PF25175	298 - 407	1.9e-13	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	299 - 408	4.6e-08	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	300 - 445	1.7e-06	WDR3 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	304 - 406	2.9e-13	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	307 - 404	4.9e-07	CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	312 - 505	9.5e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3	PF25174	333 - 408	5.2e-11	THOC3 beta-propeller domain
WDR55	PF24796	334 - 408	5.3e-06	WDR55
WD40_WDHD1_1st	PF24817	364 - 507	5.3e-13	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	372 - 451	9.3e-07	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	372 - 405	2.4e-09	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010340)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00090
fragaria_vesca	FvH4_7g11840 FvH4_7g11840 FvH4_7g11840 FvH4_7g11840
malus_domestica	MD02G1204700.v1.1 MD07G1121300.v1.1
prunus_persica	Prupe.2G145000_v2.0.a1
pyrus_communis	pycom02g16680 pycom07g10320
rosa_chinensis	RchiOBHm_Chr1g0350521
rosa_laevigata	RLG00000028479
rosa_multiflora	Rmu_sc0020900.1_g000001 Rmu_ssc0000083.1_g000024
rosa_roxburghii	Rroxscaffold_4G00304790
rosa_rugosa	Rorug01G0211700
rosa_samantha	Rh1AG226400 Rh1BG194800 Rh1CG211200 Rh1DG223000
rosa_wichuraiana	Rw1G019550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	42
AccB1I	GGYRCC	2 cut(s)	293, 1441
AccB7I	CCANNNNNTGG	3 cut(s)	475, 644, 1280
AccII	CGCG	2 cut(s)	64, 272
AclWI	GGATC	7 cut(s)	105, 248, 261, 459, 1093, 1238, 1251
AcsI	RAATTY	5 cut(s)	617, 756, 822, 1206, 1514
AcuI	CTGAAG	1 cut(s)	933
AcyI	GRCGYC	2 cut(s)	39, 294
AdeI	CACNNNGTG	1 cut(s)	1280
AfaI	GTAC	3 cut(s)	728, 734, 919
AfiI	CCNNNNNNNGG	4 cut(s)	475, 644, 855, 1280
AflIII	ACRYGT	1 cut(s)	729
AgsI	TTSAA	7 cut(s)	493, 586, 616, 985, 1077, 1104, 1376
AluBI	AGCT	6 cut(s)	324, 342, 373, 557, 1037, 1451
AluI	AGCT	6 cut(s)	324, 342, 373, 557, 1037, 1451
Alw21I	GWGCWC	2 cut(s)	344, 375
AlwI	GGATC	7 cut(s)	105, 248, 261, 459, 1093, 1238, 1251
AoxI	GGCC	1 cut(s)	423
ApeKI	GCWGC	6 cut(s)	113, 321, 998, 1028, 1034, 1523
ApoI	RAATTY	5 cut(s)	617, 756, 822, 1206, 1514
AseI	ATTAAT	1 cut(s)	1478
Asp700I	GAANNNNTTC	1 cut(s)	184
AspLEI	GCGC	3 cut(s)	64, 296, 719
AspS9I	GGNCC	4 cut(s)	274, 424, 647, 858
AsuHPI	GGTGA	7 cut(s)	92, 185, 230, 237, 838, 999, 1475
AsuNHI	GCTAGC	1 cut(s)	1286
AvaII	GGWCC	3 cut(s)	274, 647, 858
BaeGI	GKGCMC	1 cut(s)	1444
BamHI	GGATCC	2 cut(s)	253, 1243
BanI	GGYRCC	2 cut(s)	293, 1441
BanII	GRGCYC	2 cut(s)	344, 375
Bbv12I	GWGCWC	2 cut(s)	344, 375
BbvI	GCAGC	6 cut(s)	100, 333, 985, 1015, 1046, 1510
BceAI	ACGGC	4 cut(s)	93, 101, 281, 1413
BclI	TGATCA	1 cut(s)	1300
BfaI	CTAG	1 cut(s)	1287
BfmI	CTRYAG	2 cut(s)	552, 1044
BfoI	RGCGCY	2 cut(s)	297, 720
BisI	GCNGC	8 cut(s)	114, 322, 999, 1029, 1032, 1035, 1338, 1524
BlsI	GCNGC	8 cut(s)	115, 323, 1000, 1030, 1033, 1036, 1339, 1525
Bme18I	GGWCC	3 cut(s)	274, 647, 858
BmgT120I	GGNCC	4 cut(s)	274, 424, 647, 858
BmiI	GGNNCC	7 cut(s)	107, 255, 295, 789, 859, 1245, 1443
BmsI	GCATC	4 cut(s)	130, 586, 667, 689
BmtI	GCTAGC	1 cut(s)	1290
BpmI	CTGGAG	3 cut(s)	636, 1143, 1401
BpuEI	CTTGAG	1 cut(s)	1241
BsaBI	GATNNNNATC	4 cut(s)	96, 189, 450, 1242
BsaHI	GRCGYC	2 cut(s)	39, 294
BsaJI	CCNNGG	3 cut(s)	43, 783, 1345
BsaWI	WCCGGW	3 cut(s)	256, 367, 770
BsaXI	ACNNNNNCTCC	4 cut(s)	357, 387, 495, 525
Bsc4I	CCNNNNNNNGG	4 cut(s)	475, 644, 855, 1280
Bse1I	ACTGG	4 cut(s)	638, 653, 952, 1384
Bse3DI	GCAATG	4 cut(s)	300, 1023, 1355, 1431
Bse8I	GATNNNNATC	4 cut(s)	96, 189, 450, 1242
BseDI	CCNNGG	3 cut(s)	43, 783, 1345
BseJI	GATNNNNATC	4 cut(s)	96, 189, 450, 1242
BseLI	CCNNNNNNNGG	4 cut(s)	475, 644, 855, 1280
BseMI	GCAATG	4 cut(s)	300, 1023, 1355, 1431
BseMII	CTCAG	1 cut(s)	190
BseNI	ACTGG	4 cut(s)	638, 653, 952, 1384
BseRI	GAGGAG	1 cut(s)	153
BseSI	GKGCMC	1 cut(s)	1444
BseXI	GCAGC	6 cut(s)	100, 333, 985, 1015, 1046, 1510
BseYI	CCCAGC	1 cut(s)	411
BsgI	GTGCAG	1 cut(s)	1155
Bsh1236I	CGCG	2 cut(s)	64, 272
Bsh1285I	CGRYCG	1 cut(s)	16
BshFI	GGCC	1 cut(s)	425
BshNI	GGYRCC	2 cut(s)	293, 1441
BsiEI	CGRYCG	1 cut(s)	16
BsiHKAI	GWGCWC	2 cut(s)	344, 375
BsiSI	CCGG	3 cut(s)	257, 368, 771
BslFI	GGGAC	1 cut(s)	871
BslI	CCNNNNNNNGG	4 cut(s)	475, 644, 855, 1280
BsmFI	GGGAC	1 cut(s)	871
BsnI	GGCC	1 cut(s)	425
Bsp1286I	GDGCHC	3 cut(s)	344, 375, 1444
Bsp1407I	TGTACA	1 cut(s)	726
Bsp143I	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
Bsp19I	CCATGG	1 cut(s)	1345
BspANI	GGCC	1 cut(s)	425
BspCNI	CTCAG	1 cut(s)	189
BspFNI	CGCG	2 cut(s)	64, 272
BspHI	TCATGA	1 cut(s)	826
BspLI	GGNNCC	7 cut(s)	107, 255, 295, 789, 859, 1245, 1443
BspMAI	CTGCAG	1 cut(s)	1048
BspOI	GCTAGC	1 cut(s)	1290
BspPI	GGATC	7 cut(s)	105, 248, 261, 459, 1093, 1238, 1251
BspT107I	GGYRCC	2 cut(s)	293, 1441
BsrDI	GCAATG	4 cut(s)	300, 1023, 1355, 1431
BsrGI	TGTACA	1 cut(s)	726
BsrI	ACTGG	4 cut(s)	638, 653, 952, 1384
BssECI	CCNNGG	3 cut(s)	43, 783, 1345
BssMI	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
BssNI	GRCGYC	2 cut(s)	39, 294
BssT1I	CCWWGG	2 cut(s)	783, 1345
Bst4CI	ACNGT	5 cut(s)	14, 197, 242, 522, 737
BstACI	GRCGYC	2 cut(s)	39, 294
BstAPI	GCANNNNNTGC	1 cut(s)	899
BstAUI	TGTACA	1 cut(s)	726
BstC8I	GCNNGC	3 cut(s)	335, 408, 1288
BstDEI	CTNAG	4 cut(s)	176, 688, 1277, 1307
BstDSI	CCRYGG	1 cut(s)	1345
BstFNI	CGCG	2 cut(s)	64, 272
BstH2I	RGCGCY	2 cut(s)	297, 720
BstHHI	GCGC	3 cut(s)	64, 296, 719
BstKTI	GATC	9 cut(s)	100, 193, 256, 385, 454, 1068, 1088, 1246, 1303
BstMBI	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
BstMCI	CGRYCG	1 cut(s)	16
BstNSI	RCATGY	3 cut(s)	733, 968, 1431
BstSFI	CTRYAG	2 cut(s)	552, 1044
BstSLI	GKGCMC	1 cut(s)	1444
BstUI	CGCG	2 cut(s)	64, 272
BstV1I	GCAGC	6 cut(s)	100, 333, 985, 1015, 1046, 1510
BstX2I	RGATCY	3 cut(s)	253, 451, 1243
BstYI	RGATCY	3 cut(s)	253, 451, 1243
BsuRI	GGCC	1 cut(s)	425
BtgI	CCRYGG	1 cut(s)	1345
BtsI	GCAGTG	4 cut(s)	861, 876, 1143, 1367
BtsIMutI	CAGTG	4 cut(s)	861, 876, 1143, 1367
Cac8I	GCNNGC	3 cut(s)	335, 408, 1288
CciI	TCATGA	1 cut(s)	826
CfoI	GCGC	3 cut(s)	64, 296, 719
Cfr13I	GGNCC	4 cut(s)	274, 424, 647, 858
Csp6I	GTAC	3 cut(s)	727, 733, 918
CviQI	GTAC	3 cut(s)	727, 733, 918
DdeI	CTNAG	4 cut(s)	176, 688, 1277, 1307
DinI	GGCGCC	1 cut(s)	295
DpnI	GATC	9 cut(s)	99, 192, 255, 384, 453, 1067, 1087, 1245, 1302
DpnII	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
DraIII	CACNNNGTG	1 cut(s)	1280
Ecl136II	GAGCTC	2 cut(s)	342, 373
Eco130I	CCWWGG	2 cut(s)	783, 1345
Eco24I	GRGCYC	2 cut(s)	344, 375
Eco32I	GATATC	1 cut(s)	1229
Eco47I	GGWCC	3 cut(s)	274, 647, 858
Eco53kI	GAGCTC	2 cut(s)	342, 373
Eco57I	CTGAAG	1 cut(s)	933
EcoICRI	GAGCTC	2 cut(s)	342, 373
EcoRV	GATATC	1 cut(s)	1229
EcoT14I	CCWWGG	2 cut(s)	783, 1345
EcoT22I	ATGCAT	3 cut(s)	682, 1433, 1543
EcoT38I	GRGCYC	2 cut(s)	344, 375
EgeI	GGCGCC	1 cut(s)	295
EheI	GGCGCC	1 cut(s)	295
ErhI	CCWWGG	2 cut(s)	783, 1345
FaqI	GGGAC	1 cut(s)	871
FauI	CCCGC	2 cut(s)	57, 415
FauNDI	CATATG	1 cut(s)	1233
FbaI	TGATCA	1 cut(s)	1300
Fnu4HI	GCNGC	8 cut(s)	114, 322, 999, 1029, 1032, 1035, 1338, 1524
FriOI	GRGCYC	2 cut(s)	344, 375
Fsp4HI	GCNGC	8 cut(s)	114, 322, 999, 1029, 1032, 1035, 1338, 1524
FspBI	CTAG	1 cut(s)	1287
GlaI	GCGC	3 cut(s)	63, 295, 718
GluI	GCNGC	8 cut(s)	114, 322, 999, 1029, 1032, 1035, 1338, 1524
GsaI	CCCAGC	1 cut(s)	415
GsuI	CTGGAG	3 cut(s)	636, 1143, 1401
HaeII	RGCGCY	2 cut(s)	297, 720
HaeIII	GGCC	1 cut(s)	425
HapII	CCGG	3 cut(s)	257, 368, 771
HhaI	GCGC	3 cut(s)	64, 296, 719
Hin1I	GRCGYC	2 cut(s)	39, 294
Hin6I	GCGC	3 cut(s)	62, 294, 717
HinP1I	GCGC	3 cut(s)	62, 294, 717
HincII	GTYRAC	2 cut(s)	200, 970
HindII	GTYRAC	2 cut(s)	200, 970
HinfI	GANTC	5 cut(s)	185, 353, 506, 767, 1163
HpaII	CCGG	3 cut(s)	257, 368, 771
HphI	GGTGA	7 cut(s)	92, 185, 230, 237, 838, 999, 1475
Hpy166II	GTNNAC	3 cut(s)	200, 245, 970
Hpy188III	TCNNGA	5 cut(s)	156, 533, 827, 1160, 1319
Hpy8I	GTNNAC	3 cut(s)	200, 245, 970
Hpy99I	CGWCG	2 cut(s)	38, 41
HpyAV	CCTTC	4 cut(s)	322, 415, 908, 1048
HpyCH4III	ACNGT	5 cut(s)	14, 197, 242, 522, 737
HpyCH4IV	ACGT	3 cut(s)	39, 488, 1018
HpyF3I	CTNAG	4 cut(s)	176, 688, 1277, 1307
HpySE526I	ACGT	3 cut(s)	39, 488, 1018
Hsp92I	GRCGYC	2 cut(s)	39, 294
HspAI	GCGC	3 cut(s)	62, 294, 717
KasI	GGCGCC	1 cut(s)	293
Ksp22I	TGATCA	1 cut(s)	1300
Kzo9I	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
LmnI	GCTCC	6 cut(s)	105, 339, 347, 370, 378, 1531
Lsp1109I	GCAGC	6 cut(s)	100, 333, 985, 1015, 1046, 1510
LweI	GCATC	4 cut(s)	130, 586, 667, 689
MaeI	CTAG	1 cut(s)	1287
MaeII	ACGT	3 cut(s)	39, 488, 1018
MaeIII	GTNAC	2 cut(s)	80, 1138
MalI	GATC	9 cut(s)	99, 192, 255, 384, 453, 1067, 1087, 1245, 1302
MboI	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
MboII	GAAGA	3 cut(s)	254, 307, 1427
MflI	RGATCY	3 cut(s)	253, 451, 1243
MhlI	GDGCHC	3 cut(s)	344, 375, 1444
Mly113I	GGCGCC	1 cut(s)	294
MlyI	GAGTC	2 cut(s)	362, 1157
MmeI	TCCRAC	2 cut(s)	456, 570
Mph1103I	ATGCAT	3 cut(s)	682, 1433, 1543
MroXI	GAANNNNTTC	1 cut(s)	184
MseI	TTAA	3 cut(s)	1119, 1478, 1512
MslI	CAYNNNNRTG	3 cut(s)	1131, 1236, 1360
MspI	CCGG	3 cut(s)	257, 368, 771
MvnI	CGCG	2 cut(s)	64, 272
NarI	GGCGCC	1 cut(s)	294
NcoI	CCATGG	1 cut(s)	1345
NdeI	CATATG	1 cut(s)	1233
NdeII	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
NheI	GCTAGC	1 cut(s)	1286
NlaIV	GGNNCC	7 cut(s)	107, 255, 295, 789, 859, 1245, 1443
NmuCI	GTSAC	2 cut(s)	80, 1138
NsiI	ATGCAT	3 cut(s)	682, 1433, 1543
NspI	RCATGY	3 cut(s)	733, 968, 1431
PagI	TCATGA	1 cut(s)	826
PciI	ACATGT	1 cut(s)	729
PcsI	WCGNNNNNNNCGW	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	184
PfeI	GAWTC	3 cut(s)	185, 506, 767
PflFI	GACNNNGTC	1 cut(s)	38
PflMI	CCANNNNNTGG	3 cut(s)	475, 644, 1280
PkrI	GCNGC	8 cut(s)	115, 323, 1000, 1030, 1033, 1036, 1339, 1525
PleI	GAGTC	2 cut(s)	361, 1157
PluTI	GGCGCC	1 cut(s)	297
PpsI	GAGTC	2 cut(s)	361, 1157
PscI	ACATGT	1 cut(s)	729
PshBI	ATTAAT	1 cut(s)	1478
Psp124BI	GAGCTC	2 cut(s)	344, 375
PspFI	CCCAGC	1 cut(s)	411
PspN4I	GGNNCC	7 cut(s)	107, 255, 295, 789, 859, 1245, 1443
PspPI	GGNCC	4 cut(s)	274, 424, 647, 858
PstI	CTGCAG	1 cut(s)	1048
PsuI	RGATCY	3 cut(s)	253, 451, 1243
PsyI	GACNNNGTC	1 cut(s)	38
RsaI	GTAC	3 cut(s)	728, 734, 919
RsaNI	GTAC	3 cut(s)	727, 733, 918
RseI	CAYNNNNRTG	3 cut(s)	1131, 1236, 1360
SacI	GAGCTC	2 cut(s)	344, 375
SaqAI	TTAA	3 cut(s)	1119, 1478, 1512
SatI	GCNGC	8 cut(s)	114, 322, 999, 1029, 1032, 1035, 1338, 1524
Sau3AI	GATC	9 cut(s)	97, 190, 253, 382, 451, 1065, 1085, 1243, 1300
Sau96I	GGNCC	4 cut(s)	274, 424, 647, 858
SchI	GAGTC	2 cut(s)	362, 1157
SduI	GDGCHC	3 cut(s)	344, 375, 1444
SfaNI	GCATC	4 cut(s)	130, 586, 667, 689
SfcI	CTRYAG	2 cut(s)	552, 1044
SfoI	GGCGCC	1 cut(s)	295
SinI	GGWCC	3 cut(s)	274, 647, 858
SmiMI	CAYNNNNRTG	3 cut(s)	1131, 1236, 1360
SmlI	CTYRAG	1 cut(s)	1256
SmoI	CTYRAG	1 cut(s)	1256
SspDI	GGCGCC	1 cut(s)	293
SspMI	CTAG	1 cut(s)	1287
SstI	GAGCTC	2 cut(s)	344, 375
StyI	CCWWGG	2 cut(s)	783, 1345
TaaI	ACNGT	5 cut(s)	14, 197, 242, 522, 737
TaiI	ACGT	3 cut(s)	42, 491, 1021
TaqI	TCGA	5 cut(s)	33, 351, 602, 1199, 1225
TaqII	GACCGA	1 cut(s)	1078
TatI	WGTACW	1 cut(s)	726
TauI	GCSGC	2 cut(s)	1034, 1340
TfiI	GAWTC	3 cut(s)	185, 506, 767
Tru1I	TTAA	3 cut(s)	1119, 1478, 1512
Tru9I	TTAA	3 cut(s)	1119, 1478, 1512
TscAI	CASTG	4 cut(s)	868, 883, 1143, 1367
TseFI	GTSAC	2 cut(s)	80, 1138
TseI	GCWGC	6 cut(s)	113, 321, 998, 1028, 1034, 1523
Tsp45I	GTSAC	2 cut(s)	80, 1138
TspDTI	ATGAA	5 cut(s)	654, 780, 815, 1012, 1428
TspGWI	ACGGA	4 cut(s)	271, 462, 499, 556
TspRI	CASTG	4 cut(s)	868, 883, 1143, 1367
Tth111I	GACNNNGTC	1 cut(s)	38
Van91I	CCANNNNNTGG	3 cut(s)	475, 644, 1280
VpaK11BI	GGWCC	3 cut(s)	274, 647, 858
VspI	ATTAAT	1 cut(s)	1478
XapI	RAATTY	5 cut(s)	617, 756, 822, 1206, 1514
XceI	RCATGY	3 cut(s)	733, 968, 1431
XcmI	CCANNNNNNNNNTGG	2 cut(s)	710, 804
XmnI	GAANNNNTTC	1 cut(s)	184
XspI	CTAG	1 cut(s)	1287
ZraI	GACGTC	1 cut(s)	40
Zsp2I	ATGCAT	3 cut(s)	682, 1433, 1543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.