Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000142.1

Orthogroup ID

OG0010811

Physical Location & Seq

Genomic Coordinates Forward (+)

3122 .. 6364

Gene Structure 3243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000142.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

atggaagctttgtcgaagaaaagggagagttgtgagaaaaagagaagtagtgggttcaagtcttctgctgggaccgagtcactgaccgattccagtgccgagtcgagagagagcagctcgagtagatcgagctcagagacttcaagtgaggaagggaagagaaaagggcccaactcgccggctctgttgggctggcctataaggaaagctgaattgtgcaaaagctcaactgctttagctgatttggatgaagctgaggagaaggaacatgttgatgattcaaagtataaggatttggctgccaaaattgcagagatggatatgatgaaagagagattttcaaaattgttgcttggtgaagacatgtcagggtctggtaaaggggtttgcacagccatggctatttcaaatgccattaccaatctttgtgctaccatttttgggcaactgtggagattggaacccttgccttctgaaaagaaatcaatgtggaaacgagagatggaatggctaatttgcgttagtgatcatattgtggaattgataccctcttggcaaacatttcctgatggaaaaaagctagaggtcatgacttgcacgcccagatcagatatctttatgaatctcccagcactgcgcaagctagacaatatgcttcttgatataatagatagttttgccaatacggagttctggtatgttgatcaaggagttatagctccagaagccgatggctcagcctcttttcgcaaaacagtccagcggcaagaggagaagtggtggctacctgtaccacgtgtagcatctgatggtctcagtgaaagtgcaagaaagcagctgcatcacacaagggaatgcacaaatcagatactaaaagctgcaatggctatcaatagccttgctttagcagacatggaagttccagaatcgtacttggaaactcttcctaagaatgggagggcctgccttggggatataatctaccgatatattacatcagataaattctcgccagagtttctgcttgattgccttgacctgtccagtgaacatgttgctcttgagattgcaaaccgtgttgaagcctcaatatttgtttggcgtcgaagaggtcacggtcactcaaaatccctaactatttcaaaccgctccactacaaagtcatcatgggaaatggtcaaggacctagtgattgatgtggataagagagctttgctggcagaaagagctgaaagcctcctgctttcattgaagcagcgtttcccttgtcttacacaaactatcttggacaccagcaagattcaatacaacaaggatgttgggaaatccattcttgaaagctattcaagagttctggagagcctcgcatttaacattgtggctcgcattgatgacttgctgtatgtggatgacttggctaaacagactgatagaatctcatcagttactgcaggtctgtttccatacacggcacagaaactttggatcgtcagaaggactcttcccaccaaaatgggaccaaatcgcgccaacttgaccgctgaggctttgcctcctaaaccagtctcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0031267 GO:0032092 GO:0032501 GO:0032502 GO:0032879 GO:0032989 GO:0040007 GO:0040008 GO:0043393 GO:0043900 GO:0044093 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051020 GO:0051049 GO:0051098 GO:0051099 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0065008 GO:0065009 GO:0071840 GO:0071944 GO:0080092 GO:0098590 GO:0098772 GO:1904424 GO:1904426 GO:1904475 GO:1904477 GO:1905097 GO:1905099 GO:2000012 GO:2000241 GO:2001106 GO:2001108

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

523

Amino Acids

58.61

Weight (kDa)

6.46

Isoelectric Point (pI)

49.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05940 AT5G05940
fragaria_vesca	FvH4_7g23610 FvH4_7g23610
malus_domestica	MD01G1142000.v1.1 MD07G1207700.v1.1
prunus_persica	Prupe.2G243000_v2.0.a1
pyrus_communis	pycom01g16220 pycom07g19320
rosa_chinensis	RchiOBHm_Chr1g0368871
rosa_laevigata	RLG00000027181
rosa_multiflora	Rmu_co8451857.1_g000001 Rmu_sc0004250.1_g000050 Rmu_ssc0000142.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288250
rosa_rugosa	Rorug01G0345400
rosa_samantha	Rh1AG352500 Rh1BG316000 Rh1CG330700 Rh1DG347500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	638
Acc36I	ACCTGC	1 cut(s)	1442
AccBSI	CCGCTC	1 cut(s)	1149
AccII	CGCG	1 cut(s)	1527
AciI	CCGC	3 cut(s)	763, 1147, 1539
AclWI	GGATC	1 cut(s)	1493
AcsI	RAATTY	1 cut(s)	1004
AcvI	CACGTG	1 cut(s)	797
AcyI	GRCGYC	1 cut(s)	1102
AfaI	GTAC	2 cut(s)	792, 932
AfiI	CCNNNNNNNGG	3 cut(s)	441, 953, 969
AflIII	ACRYGT	4 cut(s)	268, 363, 796, 1051
AjuI	GAANNNNNNNTTGG	2 cut(s)	674, 706
Alw21I	GWGCWC	1 cut(s)	134
Alw26I	GTCTC	2 cut(s)	131, 818
AlwI	GGATC	1 cut(s)	1493
AlwNI	CAGNNNCTG	2 cut(s)	374, 1448
Ama87I	CYCGRG	1 cut(s)	118
AoxI	GGCC	3 cut(s)	167, 194, 960
ApaI	GGGCCC	1 cut(s)	171
ApeKI	GCWGC	6 cut(s)	114, 299, 835, 838, 878, 1255
ApoI	RAATTY	1 cut(s)	1004
Asp700I	GAANNNNTTC	1 cut(s)	942
AspLEI	GCGC	2 cut(s)	639, 1529
AspS9I	GGNCC	6 cut(s)	72, 167, 168, 960, 1183, 1517
AsuHPI	GGTGA	1 cut(s)	368
AvaI	CYCGRG	1 cut(s)	118
AvaII	GGWCC	3 cut(s)	72, 1183, 1517
BaeGI	GKGCMC	1 cut(s)	171
BanII	GRGCYC	2 cut(s)	134, 171
BbrPI	CACGTG	1 cut(s)	797
BbsI	GAAGAC	2 cut(s)	54, 366
Bbv12I	GWGCWC	1 cut(s)	134
BbvCI	CCTCAGC	2 cut(s)	255, 1542
BbvI	GCAGC	6 cut(s)	126, 286, 825, 847, 865, 1267
BccI	CCATC	5 cut(s)	310, 496, 563, 725, 803
BceAI	ACGGC	1 cut(s)	1485
BcgI	CGANNNNNNTGC	2 cut(s)	77, 111
BclI	TGATCA	2 cut(s)	526, 703
BcoDI	GTCTC	2 cut(s)	131, 818
BfaI	CTAG	3 cut(s)	581, 644, 1187
BfmI	CTRYAG	1 cut(s)	1449
BfuAI	ACCTGC	1 cut(s)	1442
BisI	GCNGC	7 cut(s)	115, 300, 764, 836, 839, 879, 1256
BlpI	GCTNAGC	1 cut(s)	736
BlsI	GCNGC	7 cut(s)	116, 301, 765, 837, 840, 880, 1257
Bme18I	GGWCC	3 cut(s)	72, 1183, 1517
BmeT110I	CYCGRG	1 cut(s)	118
BmgT120I	GGNCC	6 cut(s)	72, 167, 168, 960, 1183, 1517
BmiI	GGNNCC	4 cut(s)	73, 169, 462, 1518
BmsI	GCATC	2 cut(s)	812, 850
BpiI	GAAGAC	2 cut(s)	54, 366
BplI	GAGNNNNNCTC	2 cut(s)	101, 133
BpmI	CTGGAG	2 cut(s)	705, 1376
Bpu10I	CCTNAGC	2 cut(s)	255, 1542
Bpu1102I	GCTNAGC	1 cut(s)	736
BpuEI	CTTGAG	1 cut(s)	1082
BsaAI	YACGTR	1 cut(s)	797
BsaHI	GRCGYC	1 cut(s)	1102
BsaI	GGTCTC	1 cut(s)	818
BsaJI	CCNNGG	2 cut(s)	396, 967
BsaXI	ACNNNNNCTCC	4 cut(s)	680, 710, 764, 794
Bsc4I	CCNNNNNNNGG	3 cut(s)	441, 953, 969
Bse118I	RCCGGY	1 cut(s)	178
Bse1I	ACTGG	3 cut(s)	93, 1044, 1562
Bse3DI	GCAATG	1 cut(s)	888
BseDI	CCNNGG	2 cut(s)	396, 967
BseGI	GGATG	3 cut(s)	253, 1321, 1414
BseLI	CCNNNNNNNGG	3 cut(s)	441, 953, 969
BseMI	GCAATG	1 cut(s)	888
BseMII	CTCAG	5 cut(s)	147, 246, 750, 829, 1533
BseNI	ACTGG	3 cut(s)	93, 1044, 1562
BseRI	GAGGAG	2 cut(s)	272, 785
BseSI	GKGCMC	1 cut(s)	171
BseXI	GCAGC	6 cut(s)	126, 286, 825, 847, 865, 1267
BseYI	CCCAGC	2 cut(s)	68, 628
Bsh1236I	CGCG	1 cut(s)	1527
BshFI	GGCC	3 cut(s)	169, 196, 962
BsiHKAI	GWGCWC	1 cut(s)	134
BsiHKCI	CYCGRG	1 cut(s)	118
BsiSI	CCGG	1 cut(s)	179
BslFI	GGGAC	2 cut(s)	85, 1530
BslI	CCNNNNNNNGG	3 cut(s)	441, 953, 969
BsmAI	GTCTC	2 cut(s)	131, 818
BsmFI	GGGAC	2 cut(s)	85, 1530
BsmI	GAATGC	1 cut(s)	860
BsnI	GGCC	3 cut(s)	169, 196, 962
Bso31I	GGTCTC	1 cut(s)	818
BsoBI	CYCGRG	1 cut(s)	118
Bsp120I	GGGCCC	1 cut(s)	167
Bsp1286I	GDGCHC	2 cut(s)	134, 171
Bsp143I	GATC	5 cut(s)	125, 526, 605, 703, 1485
Bsp1720I	GCTNAGC	1 cut(s)	736
Bsp19I	CCATGG	1 cut(s)	396
BspACI	CCGC	3 cut(s)	763, 1147, 1539
BspANI	GGCC	3 cut(s)	169, 196, 962
BspCNI	CTCAG	5 cut(s)	146, 247, 749, 828, 1534
BspFNI	CGCG	1 cut(s)	1527
BspHI	TCATGA	1 cut(s)	588
BspLI	GGNNCC	4 cut(s)	73, 169, 462, 1518
BspMAI	CTGCAG	1 cut(s)	1453
BspMI	ACCTGC	1 cut(s)	1442
BspPI	GGATC	1 cut(s)	1493
BspTNI	GGTCTC	1 cut(s)	818
BsrBI	CCGCTC	1 cut(s)	1149
BsrDI	GCAATG	1 cut(s)	888
BsrFI	RCCGGY	1 cut(s)	178
BsrI	ACTGG	3 cut(s)	93, 1044, 1562
BssAI	RCCGGY	1 cut(s)	178
BssECI	CCNNGG	2 cut(s)	396, 967
BssMI	GATC	5 cut(s)	125, 526, 605, 703, 1485
BssNI	GRCGYC	1 cut(s)	1102
BssT1I	CCWWGG	2 cut(s)	396, 967
Bst4CI	ACNGT	4 cut(s)	450, 757, 1076, 1118
Bst6I	CTCTTC	4 cut(s)	152, 948, 1102, 1506
BstACI	GRCGYC	1 cut(s)	1102
BstBAI	YACGTR	1 cut(s)	797
BstC8I	GCNNGC	7 cut(s)	180, 194, 599, 641, 964, 1218, 1384
BstDEI	CTNAG	6 cut(s)	133, 255, 736, 815, 948, 1542
BstDSI	CCRYGG	1 cut(s)	396
BstF5I	GGATG	3 cut(s)	253, 1321, 1414
BstFNI	CGCG	1 cut(s)	1527
BstHHI	GCGC	2 cut(s)	639, 1529
BstKTI	GATC	5 cut(s)	128, 529, 608, 706, 1488
BstMAI	GTCTC	2 cut(s)	131, 818
BstMBI	GATC	5 cut(s)	125, 526, 605, 703, 1485
BstMWI	GCNNNNNNNGC	6 cut(s)	175, 308, 725, 884, 1217, 1226
BstNSI	RCATGY	3 cut(s)	272, 367, 1055
BstSFI	CTRYAG	1 cut(s)	1449
BstSLI	GKGCMC	1 cut(s)	171
BstUI	CGCG	1 cut(s)	1527
BstV1I	GCAGC	6 cut(s)	126, 286, 825, 847, 865, 1267
BstV2I	GAAGAC	2 cut(s)	54, 366
BstXI	CCANNNNNNTGG	1 cut(s)	1513
BsuRI	GGCC	3 cut(s)	169, 196, 962
BtgI	CCRYGG	1 cut(s)	396
BtsCI	GGATG	3 cut(s)	253, 1321, 1414
BtsI	GCAGTG	1 cut(s)	632
BtsIMutI	CAGTG	5 cut(s)	80, 100, 632, 823, 1051
BveI	ACCTGC	1 cut(s)	1442
Cac8I	GCNNGC	7 cut(s)	180, 194, 599, 641, 964, 1218, 1384
CaiI	CAGNNNCTG	2 cut(s)	374, 1448
CciI	TCATGA	1 cut(s)	588
CfoI	GCGC	2 cut(s)	639, 1529
Cfr10I	RCCGGY	1 cut(s)	178
Cfr13I	GGNCC	6 cut(s)	72, 167, 168, 960, 1183, 1517
CseI	GACGC	1 cut(s)	1091
Csp6I	GTAC	2 cut(s)	791, 931
CviAII	CATG	7 cut(s)	269, 364, 397, 589, 913, 1052, 1167
CviQI	GTAC	2 cut(s)	791, 931
DdeI	CTNAG	6 cut(s)	133, 255, 736, 815, 948, 1542
DpnI	GATC	5 cut(s)	127, 528, 607, 705, 1487
DpnII	GATC	5 cut(s)	125, 526, 605, 703, 1485
Eam1104I	CTCTTC	4 cut(s)	152, 948, 1102, 1506
EarI	CTCTTC	4 cut(s)	152, 948, 1102, 1506
Ecl136II	GAGCTC	1 cut(s)	132
Eco130I	CCWWGG	2 cut(s)	396, 967
Eco24I	GRGCYC	2 cut(s)	134, 171
Eco31I	GGTCTC	1 cut(s)	818
Eco32I	GATATC	1 cut(s)	613
Eco47I	GGWCC	3 cut(s)	72, 1183, 1517
Eco53kI	GAGCTC	1 cut(s)	132
Eco72I	CACGTG	1 cut(s)	797
Eco88I	CYCGRG	1 cut(s)	118
EcoICRI	GAGCTC	1 cut(s)	132
EcoO109I	RGGNCCY	3 cut(s)	167, 960, 1183
EcoRV	GATATC	1 cut(s)	613
EcoT14I	CCWWGG	2 cut(s)	396, 967
EcoT38I	GRGCYC	2 cut(s)	134, 171
ErhI	CCWWGG	2 cut(s)	396, 967
FaeI	CATG	7 cut(s)	272, 367, 400, 592, 916, 1055, 1170
FaqI	GGGAC	2 cut(s)	85, 1530
FatI	CATG	7 cut(s)	268, 363, 396, 588, 912, 1051, 1166
FbaI	TGATCA	2 cut(s)	526, 703
Fnu4HI	GCNGC	7 cut(s)	115, 300, 764, 836, 839, 879, 1256
FokI	GGATG	3 cut(s)	260, 1328, 1421
FriOI	GRGCYC	2 cut(s)	134, 171
Fsp4HI	GCNGC	7 cut(s)	115, 300, 764, 836, 839, 879, 1256
FspBI	CTAG	3 cut(s)	581, 644, 1187
FspI	TGCGCA	1 cut(s)	638
GlaI	GCGC	2 cut(s)	638, 1528
GluI	GCNGC	7 cut(s)	115, 300, 764, 836, 839, 879, 1256
GsaI	CCCAGC	2 cut(s)	72, 632
GsuI	CTGGAG	2 cut(s)	705, 1376
HaeIII	GGCC	3 cut(s)	169, 196, 962
HapII	CCGG	1 cut(s)	179
HgaI	GACGC	1 cut(s)	1091
HhaI	GCGC	2 cut(s)	639, 1529
Hin1I	GRCGYC	1 cut(s)	1102
Hin1II	CATG	7 cut(s)	272, 367, 400, 592, 916, 1055, 1170
Hin6I	GCGC	2 cut(s)	637, 1527
HinP1I	GCGC	2 cut(s)	637, 1527
HindIII	AAGCTT	1 cut(s)	6
HinfI	GANTC	9 cut(s)	77, 89, 101, 278, 622, 926, 1300, 1434, 1498
HpaII	CCGG	1 cut(s)	179
HphI	GGTGA	1 cut(s)	368
Hpy166II	GTNNAC	1 cut(s)	1049
Hpy188I	TCNGA	7 cut(s)	136, 475, 610, 808, 867, 1000, 1493
Hpy8I	GTNNAC	1 cut(s)	1049
Hpy99I	CGWCG	1 cut(s)	1107
HpyAV	CCTTC	4 cut(s)	146, 256, 480, 1488
HpyCH4III	ACNGT	4 cut(s)	450, 757, 1076, 1118
HpyCH4IV	ACGT	1 cut(s)	796
HpyF10VI	GCNNNNNNNGC	6 cut(s)	175, 308, 725, 884, 1217, 1226
HpyF3I	CTNAG	6 cut(s)	133, 255, 736, 815, 948, 1542
HpySE526I	ACGT	1 cut(s)	796
Hsp92I	GRCGYC	1 cut(s)	1102
Hsp92II	CATG	7 cut(s)	272, 367, 400, 592, 916, 1055, 1170
HspAI	GCGC	2 cut(s)	637, 1527
KroI	GCCGGC	1 cut(s)	178
KroNI	GCCGGC	1 cut(s)	180
Ksp22I	TGATCA	2 cut(s)	526, 703
Kzo9I	GATC	5 cut(s)	125, 526, 605, 703, 1485
LmnI	GCTCC	2 cut(s)	724, 1154
Lsp1109I	GCAGC	6 cut(s)	126, 286, 825, 847, 865, 1267
LweI	GCATC	2 cut(s)	812, 850
MaeI	CTAG	3 cut(s)	581, 644, 1187
MaeII	ACGT	1 cut(s)	796
MaeIII	GTNAC	4 cut(s)	78, 1112, 1118, 1444
MalI	GATC	5 cut(s)	127, 528, 607, 705, 1487
MbiI	CCGCTC	1 cut(s)	1149
MboI	GATC	5 cut(s)	125, 526, 605, 703, 1485
MboII	GAAGA	7 cut(s)	28, 54, 169, 371, 935, 1119, 1493
MhlI	GDGCHC	2 cut(s)	134, 171
MluCI	AATT	6 cut(s)	212, 306, 344, 513, 539, 1004
MlyI	GAGTC	3 cut(s)	86, 110, 1492
MroNI	GCCGGC	1 cut(s)	178
MroXI	GAANNNNTTC	1 cut(s)	942
MseI	TTAA	1 cut(s)	1371
MslI	CAYNNNNRTG	3 cut(s)	273, 395, 1511
MspA1I	CMGCKG	3 cut(s)	763, 838, 1541
MspI	CCGG	1 cut(s)	179
Mva1269I	GAATGC	1 cut(s)	860
MvnI	CGCG	1 cut(s)	1527
MwoI	GCNNNNNNNGC	6 cut(s)	175, 308, 725, 884, 1217, 1226
NaeI	GCCGGC	1 cut(s)	180
NcoI	CCATGG	1 cut(s)	396
NdeII	GATC	5 cut(s)	125, 526, 605, 703, 1485
NgoMIV	GCCGGC	1 cut(s)	178
NlaIII	CATG	7 cut(s)	272, 367, 400, 592, 916, 1055, 1170
NlaIV	GGNNCC	4 cut(s)	73, 169, 462, 1518
NmeAIII	GCCGAG	1 cut(s)	124
NmuCI	GTSAC	3 cut(s)	78, 1112, 1118
NsbI	TGCGCA	1 cut(s)	638
NspI	RCATGY	3 cut(s)	272, 367, 1055
PaeR7I	CTCGAG	1 cut(s)	118
PagI	TCATGA	1 cut(s)	588
PciI	ACATGT	3 cut(s)	268, 363, 1051
PcsI	WCGNNNNNNNCGW	1 cut(s)	125
PctI	GAATGC	1 cut(s)	860
PdiI	GCCGGC	1 cut(s)	180
PdmI	GAANNNNTTC	1 cut(s)	942
PfeI	GAWTC	6 cut(s)	89, 278, 622, 926, 1300, 1434
PflFI	GACNNNGTC	1 cut(s)	76
PkrI	GCNGC	7 cut(s)	116, 301, 765, 837, 840, 880, 1257
PleI	GAGTC	3 cut(s)	85, 109, 1492
PmaCI	CACGTG	1 cut(s)	797
PmlI	CACGTG	1 cut(s)	797
PpsI	GAGTC	3 cut(s)	85, 109, 1492
Ppu21I	YACGTR	1 cut(s)	797
PpuMI	RGGWCCY	1 cut(s)	1183
PscI	ACATGT	3 cut(s)	268, 363, 1051
Psp124BI	GAGCTC	1 cut(s)	134
Psp5II	RGGWCCY	1 cut(s)	1183
PspCI	CACGTG	1 cut(s)	797
PspFI	CCCAGC	2 cut(s)	68, 628
PspN4I	GGNNCC	4 cut(s)	73, 169, 462, 1518
PspOMI	GGGCCC	1 cut(s)	167
PspPI	GGNCC	6 cut(s)	72, 167, 168, 960, 1183, 1517
PspPPI	RGGWCCY	1 cut(s)	1183
PspXI	VCTCGAGB	1 cut(s)	118
PstI	CTGCAG	1 cut(s)	1453
PstNI	CAGNNNCTG	2 cut(s)	374, 1448
PsyI	GACNNNGTC	1 cut(s)	76
PvuII	CAGCTG	1 cut(s)	838
RsaI	GTAC	2 cut(s)	792, 932
RsaNI	GTAC	2 cut(s)	791, 931
RseI	CAYNNNNRTG	3 cut(s)	273, 395, 1511
SacI	GAGCTC	1 cut(s)	134
SaqAI	TTAA	1 cut(s)	1371
SatI	GCNGC	7 cut(s)	115, 300, 764, 836, 839, 879, 1256
Sau3AI	GATC	5 cut(s)	125, 526, 605, 703, 1485
Sau96I	GGNCC	6 cut(s)	72, 167, 168, 960, 1183, 1517
SchI	GAGTC	3 cut(s)	86, 110, 1492
SduI	GDGCHC	2 cut(s)	134, 171
SfaNI	GCATC	2 cut(s)	812, 850
SfcI	CTRYAG	1 cut(s)	1449
Sfr274I	CTCGAG	1 cut(s)	118
SinI	GGWCC	3 cut(s)	72, 1183, 1517
SlaI	CTCGAG	1 cut(s)	118
SmiMI	CAYNNNNRTG	3 cut(s)	273, 395, 1511
SmlI	CTYRAG	2 cut(s)	118, 1061
SmoI	CTYRAG	2 cut(s)	118, 1061
Sse9I	AATT	6 cut(s)	212, 306, 344, 513, 539, 1004
SsiI	CCGC	3 cut(s)	763, 1147, 1539
SspI	AATATT	1 cut(s)	1092
SspMI	CTAG	3 cut(s)	581, 644, 1187
SstI	GAGCTC	1 cut(s)	134
StyI	CCWWGG	2 cut(s)	396, 967
TaaI	ACNGT	4 cut(s)	450, 757, 1076, 1118
TaiI	ACGT	1 cut(s)	799
TaqI	TCGA	5 cut(s)	14, 104, 119, 128, 1105
TaqII	GACCGA	2 cut(s)	89, 101
TasI	AATT	6 cut(s)	212, 306, 344, 513, 539, 1004
TauI	GCSGC	1 cut(s)	766
TfiI	GAWTC	6 cut(s)	89, 278, 622, 926, 1300, 1434
Tru1I	TTAA	1 cut(s)	1371
Tru9I	TTAA	1 cut(s)	1371
TscAI	CASTG	5 cut(s)	87, 100, 639, 823, 1051
TseFI	GTSAC	3 cut(s)	78, 1112, 1118
TseI	GCWGC	6 cut(s)	114, 299, 835, 838, 878, 1255
Tsp45I	GTSAC	3 cut(s)	78, 1112, 1118
TspDTI	ATGAA	4 cut(s)	264, 341, 635, 1236
TspGWI	ACGGA	1 cut(s)	701
TspRI	CASTG	5 cut(s)	87, 100, 639, 823, 1051
Tth111I	GACNNNGTC	1 cut(s)	76
VpaK11BI	GGWCC	3 cut(s)	72, 1183, 1517
XapI	RAATTY	1 cut(s)	1004
XceI	RCATGY	3 cut(s)	272, 367, 1055
XhoI	CTCGAG	1 cut(s)	118
XmnI	GAANNNNTTC	1 cut(s)	942
XspI	CTAG	3 cut(s)	581, 644, 1187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.