Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0010811

Physical Location & Seq

Genomic Coordinates Forward (+)

9111007 .. 9114330

Gene Structure 3324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00288250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGAAGCTTTATCGAAGAAAAGGGAGAATACTGAGAAAAAGAGAACTGGGTTCAAGTCTTCAGCTGGGACCGAGTCACTGACCGATTCCAGTGCCGAGTCGAGAGAGAGCAGCTCGAGTAGATCGAGTTCCGAGACTTCAAGTGAGGAAGTGAAGAGAAAAGGGCCCAACTCGCCGGCTCTGTTGGGCTGGCCTATAAGGAAAGCTGAATTGTGCAAAAGCTCAACTGCTTTAGCTGATTTGGATGAAGCTGAAGAGAAGGAACATGTTGATGATTCAAAGTATAAGGATTTGGCTGCCAAAATTGCAGAGATGGATATGATGAAAGAGAGATTTTCAAAATTGTTGCTTGGTGAAGACATGTCAGGGTCTGGTAAAGGGGTTTGCACGGCCATGGCTATTTCAAATGCCATTACCAATCTTTGTGCTACCATTTTTGGGCAACTGTGGAGATTGGAACCCTTGCCTTCTGAAAAGAAATCGATGTGGAAACGAGAGATGGAATGGCTAATTTGCGTTAGTGATCATATTGTGGAATTGATACCCTCTTGGCAAACATTTCCTGATGGAAAAAAGCTAGAGGTCATGACTTGCACGCCCAGATCAGATATCTTTATGAATCTCCCAGCACTGCGCAAGCTAGACAATATGCTTCTTGATATACTAGATAGTTTCGCCAATACGGAGTTCTGGTATGTTGATCAAGGAGTTATAGCTCCAGAAGCCGATGGCTCAGCCTCTTTTCGCAAAACAGTCCAGCGGCAAGAGGAGAAGTGGTGGCTACCTGTACCACGTGTAGCATCTGATGGTCTCAGTGAAAGTGCAAGAAAGCAGTTGCATCACACAAGGGAATGCACAAATCAGATACTAAAAGCTGCAATGGCTATCAATAGCCTTGCTTTAGCAGACATGGAAGTTCCAGAATCGTACTTGGAAACTCTTCCTAAGAATGGGAGGGCCTGCCTTGGGGATATAATCTACCGATATATTACATCAGATAAATTCTCGCCAGAGTTTCTGCTTGATTGCCTTGACCTGTCCAGTGAACATGTTGCTCTTGAGATTGCAAACCGTGTTGAAGCCTCAATATTTGTTTGGCGTCGAAGGGGTCACGGTCACTCAAAATCCCAAACTATTCCAAATCGCTCCACTACAAAGTCATCATGGGAAATGGTCAAGGACCTAGTGATTGATGTGGATAAGAGAGCTTTGCTGGCAGAAAGAGCTGAAAGCCTCCTGCTTTCATTGAAGCAGCGTTTCCCTTGTCTTACACAAACTATGTTGGACACCAGCAAGATTCAATACAACAAGGATGTTGGGAAATCCATTCTTGAAAGCTATTCAAGAGTTCTGGAGAGCCTCGCATTTAACATTGTGGCTCGCATTGATGACTTGCTGTATGTGGATGACTTGGCTAAACAGACTGATAGAATCTCATCAGTTACTGCAGTCAGTGTGATTTCTCGAAAGAAGGTTCCAGTCACATATTCGGTGCCACACTCAAGCACTCCGTTCAGAAGAGCTTCTACAAATCCTAACTTATCCCCTGCACCTTTAATCAGCCCTGCAAGGGGAGAGAGGACTCCTTTTCTCCGCAGCAACAACAACAACAATGTTGACAAGCCTTCTCGTCGCGGCTTTGGAGTTAGAAGAGTCTTGACAAATTATCTTGGTGTCGAGACAAAGCCAAGGATATGTAGCAACACAGTTGAAGGGTCTGTTTCCATACATGGCACAGAAACTTTGGATCGTCAGAAGGACTCTTCCCACCAAAATGGGACCAAATCGCGCCAACTTGACCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0031267 GO:0032092 GO:0032501 GO:0032502 GO:0032879 GO:0032989 GO:0040007 GO:0040008 GO:0043393 GO:0043900 GO:0044093 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051020 GO:0051049 GO:0051098 GO:0051099 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0065008 GO:0065009 GO:0071840 GO:0071944 GO:0080092 GO:0098590 GO:0098772 GO:1904424 GO:1904426 GO:1904475 GO:1904477 GO:1905097 GO:1905099 GO:2000012 GO:2000241 GO:2001106 GO:2001108

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

601

Amino Acids

67.39

Weight (kDa)

8.5

Isoelectric Point (pI)

48.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRONE	PF03759	104 - 473	2.4e-183	PRONE (Plant-specific Rop nucleotide exchanger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05940 AT5G05940
fragaria_vesca	FvH4_7g23610 FvH4_7g23610
malus_domestica	MD01G1142000.v1.1 MD07G1207700.v1.1
prunus_persica	Prupe.2G243000_v2.0.a1
pyrus_communis	pycom01g16220 pycom07g19320
rosa_chinensis	RchiOBHm_Chr1g0368871
rosa_laevigata	RLG00000027181
rosa_multiflora	Rmu_co8451857.1_g000001 Rmu_sc0004250.1_g000050 Rmu_ssc0000142.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288250
rosa_rugosa	Rorug01G0345400
rosa_samantha	Rh1AG352500 Rh1BG316000 Rh1CG330700 Rh1DG347500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	635
AccB1I	GGYRCC	1 cut(s)	1492
AccII	CGCG	2 cut(s)	1635, 1789
AciI	CCGC	4 cut(s)	760, 1594, 1635, 1801
AclWI	GGATC	1 cut(s)	1755
AcoI	YGGCCR	1 cut(s)	390
AcsI	RAATTY	1 cut(s)	1001
AcuI	CTGAAG	2 cut(s)	45, 273
AcvI	CACGTG	1 cut(s)	794
AcyI	GRCGYC	1 cut(s)	1099
AfaI	GTAC	2 cut(s)	789, 929
AfiI	CCNNNNNNNGG	5 cut(s)	438, 950, 966, 1570, 1571
AflIII	ACRYGT	4 cut(s)	265, 360, 793, 1048
AjuI	GAANNNNNNNTTGG	2 cut(s)	671, 703
Alw26I	GTCTC	3 cut(s)	128, 815, 1673
AlwI	GGATC	1 cut(s)	1755
AlwNI	CAGNNNCTG	2 cut(s)	371, 1445
Ama87I	CYCGRG	1 cut(s)	115
AoxI	GGCC	4 cut(s)	164, 191, 390, 957
ApaI	GGGCCC	1 cut(s)	168
ApeKI	GCWGC	5 cut(s)	111, 296, 875, 1252, 1596
ApoI	RAATTY	1 cut(s)	1001
Asp700I	GAANNNNTTC	2 cut(s)	939, 1522
AspLEI	GCGC	2 cut(s)	636, 1791
AspS9I	GGNCC	6 cut(s)	69, 164, 165, 957, 1180, 1779
AsuHPI	GGTGA	1 cut(s)	365
AvaI	CYCGRG	1 cut(s)	115
AvaII	GGWCC	3 cut(s)	69, 1180, 1779
BaeGI	GKGCMC	1 cut(s)	168
BanI	GGYRCC	1 cut(s)	1492
BanII	GRGCYC	1 cut(s)	168
BarI	GAAGNNNNNNTAC	2 cut(s)	1510, 1542
BbrPI	CACGTG	1 cut(s)	794
BbsI	GAAGAC	2 cut(s)	51, 363
BbvI	GCAGC	5 cut(s)	123, 283, 862, 1264, 1608
BccI	CCATC	5 cut(s)	307, 493, 560, 722, 800
BceAI	ACGGC	1 cut(s)	405
BcgI	CGANNNNNNTGC	2 cut(s)	74, 108
BclI	TGATCA	2 cut(s)	523, 700
BcoDI	GTCTC	3 cut(s)	128, 815, 1673
BfaI	CTAG	4 cut(s)	578, 641, 665, 1184
BfmI	CTRYAG	1 cut(s)	1446
BisI	GCNGC	7 cut(s)	112, 297, 761, 876, 1253, 1597, 1636
BlpI	GCTNAGC	1 cut(s)	733
BlsI	GCNGC	7 cut(s)	113, 298, 762, 877, 1254, 1598, 1637
Bme18I	GGWCC	3 cut(s)	69, 1180, 1779
BmeT110I	CYCGRG	1 cut(s)	115
BmgT120I	GGNCC	6 cut(s)	69, 164, 165, 957, 1180, 1779
BmiI	GGNNCC	6 cut(s)	70, 166, 459, 1476, 1494, 1780
BmrI	ACTGGG	1 cut(s)	57
BmsI	GCATC	2 cut(s)	809, 847
BmuI	ACTGGG	1 cut(s)	57
BpiI	GAAGAC	2 cut(s)	51, 363
BplI	GAGNNNNNCTC	2 cut(s)	98, 130
BpmI	CTGGAG	2 cut(s)	702, 1373
Bpu1102I	GCTNAGC	1 cut(s)	733
BpuEI	CTTGAG	2 cut(s)	1079, 1486
Bsa29I	ATCGAT	1 cut(s)	482
BsaAI	YACGTR	1 cut(s)	794
BsaHI	GRCGYC	1 cut(s)	1099
BsaI	GGTCTC	1 cut(s)	815
BsaJI	CCNNGG	3 cut(s)	393, 964, 1688
BsaXI	ACNNNNNCTCC	4 cut(s)	677, 707, 761, 791
Bsc4I	CCNNNNNNNGG	5 cut(s)	438, 950, 966, 1570, 1571
Bse118I	RCCGGY	1 cut(s)	175
Bse1I	ACTGG	4 cut(s)	52, 90, 1041, 1478
Bse3DI	GCAATG	1 cut(s)	885
BseCI	ATCGAT	1 cut(s)	482
BseDI	CCNNGG	3 cut(s)	393, 964, 1688
BseGI	GGATG	3 cut(s)	250, 1318, 1411
BseLI	CCNNNNNNNGG	5 cut(s)	438, 950, 966, 1570, 1571
BseMI	GCAATG	1 cut(s)	885
BseMII	CTCAG	3 cut(s)	24, 747, 826
BseNI	ACTGG	4 cut(s)	52, 90, 1041, 1478
BseRI	GAGGAG	1 cut(s)	782
BseSI	GKGCMC	1 cut(s)	168
BseXI	GCAGC	5 cut(s)	123, 283, 862, 1264, 1608
BseYI	CCCAGC	2 cut(s)	65, 625
BsgI	GTGCAG	1 cut(s)	1533
Bsh1236I	CGCG	2 cut(s)	1635, 1789
BshFI	GGCC	4 cut(s)	166, 193, 392, 959
BshNI	GGYRCC	1 cut(s)	1492
BshVI	ATCGAT	1 cut(s)	482
BsiHKCI	CYCGRG	1 cut(s)	115
BsiSI	CCGG	1 cut(s)	176
BslFI	GGGAC	2 cut(s)	82, 1792
BslI	CCNNNNNNNGG	5 cut(s)	438, 950, 966, 1570, 1571
BsmAI	GTCTC	3 cut(s)	128, 815, 1673
BsmFI	GGGAC	2 cut(s)	82, 1792
BsmI	GAATGC	1 cut(s)	857
BsnI	GGCC	4 cut(s)	166, 193, 392, 959
Bso31I	GGTCTC	1 cut(s)	815
BsoBI	CYCGRG	1 cut(s)	115
Bsp120I	GGGCCC	1 cut(s)	164
Bsp1286I	GDGCHC	1 cut(s)	168
Bsp143I	GATC	5 cut(s)	122, 523, 602, 700, 1747
Bsp1720I	GCTNAGC	1 cut(s)	733
Bsp19I	CCATGG	1 cut(s)	393
BspACI	CCGC	4 cut(s)	760, 1594, 1635, 1801
BspANI	GGCC	4 cut(s)	166, 193, 392, 959
BspCNI	CTCAG	3 cut(s)	25, 746, 825
BspDI	ATCGAT	1 cut(s)	482
BspFNI	CGCG	2 cut(s)	1635, 1789
BspHI	TCATGA	1 cut(s)	585
BspLI	GGNNCC	6 cut(s)	70, 166, 459, 1476, 1494, 1780
BspMAI	CTGCAG	1 cut(s)	1450
BspPI	GGATC	1 cut(s)	1755
BspQI	GCTCTTC	1 cut(s)	1513
BspT107I	GGYRCC	1 cut(s)	1492
BspTNI	GGTCTC	1 cut(s)	815
BsrDI	GCAATG	1 cut(s)	885
BsrFI	RCCGGY	1 cut(s)	175
BsrI	ACTGG	4 cut(s)	52, 90, 1041, 1478
BssAI	RCCGGY	1 cut(s)	175
BssECI	CCNNGG	3 cut(s)	393, 964, 1688
BssMI	GATC	5 cut(s)	122, 523, 602, 700, 1747
BssNI	GRCGYC	1 cut(s)	1099
BssT1I	CCWWGG	3 cut(s)	393, 964, 1688
Bst4CI	ACNGT	5 cut(s)	447, 754, 1073, 1115, 1708
Bst6I	CTCTTC	6 cut(s)	149, 249, 945, 1513, 1645, 1768
BstACI	GRCGYC	1 cut(s)	1099
BstBAI	YACGTR	1 cut(s)	794
BstC8I	GCNNGC	7 cut(s)	177, 191, 596, 638, 961, 1215, 1381
BstDEI	CTNAG	4 cut(s)	33, 733, 812, 945
BstDSI	CCRYGG	1 cut(s)	393
BstF5I	GGATG	3 cut(s)	250, 1318, 1411
BstFNI	CGCG	2 cut(s)	1635, 1789
BstHHI	GCGC	2 cut(s)	636, 1791
BstKTI	GATC	5 cut(s)	125, 526, 605, 703, 1750
BstMAI	GTCTC	3 cut(s)	128, 815, 1673
BstMBI	GATC	5 cut(s)	122, 523, 602, 700, 1747
BstMWI	GCNNNNNNNGC	6 cut(s)	172, 305, 722, 881, 1214, 1223
BstNSI	RCATGY	3 cut(s)	269, 364, 1052
BstSFI	CTRYAG	1 cut(s)	1446
BstSLI	GKGCMC	1 cut(s)	168
BstUI	CGCG	2 cut(s)	1635, 1789
BstV1I	GCAGC	5 cut(s)	123, 283, 862, 1264, 1608
BstV2I	GAAGAC	2 cut(s)	51, 363
BstXI	CCANNNNNNTGG	1 cut(s)	1775
Bsu15I	ATCGAT	1 cut(s)	482
BsuRI	GGCC	4 cut(s)	166, 193, 392, 959
BsuTUI	ATCGAT	1 cut(s)	482
BtgI	CCRYGG	1 cut(s)	393
BtsCI	GGATG	3 cut(s)	250, 1318, 1411
BtsI	GCAGTG	1 cut(s)	629
BtsIMutI	CAGTG	6 cut(s)	77, 97, 629, 820, 1048, 1459
Cac8I	GCNNGC	7 cut(s)	177, 191, 596, 638, 961, 1215, 1381
CaiI	CAGNNNCTG	2 cut(s)	371, 1445
CciI	TCATGA	1 cut(s)	585
CfoI	GCGC	2 cut(s)	636, 1791
Cfr10I	RCCGGY	1 cut(s)	175
Cfr13I	GGNCC	6 cut(s)	69, 164, 165, 957, 1180, 1779
ClaI	ATCGAT	1 cut(s)	482
CseI	GACGC	1 cut(s)	1088
Csp6I	GTAC	2 cut(s)	788, 928
CviAII	CATG	8 cut(s)	266, 361, 394, 586, 910, 1049, 1164, 1730
CviQI	GTAC	2 cut(s)	788, 928
DdeI	CTNAG	4 cut(s)	33, 733, 812, 945
DpnI	GATC	5 cut(s)	124, 525, 604, 702, 1749
DpnII	GATC	5 cut(s)	122, 523, 602, 700, 1747
EaeI	YGGCCR	1 cut(s)	390
Eam1104I	CTCTTC	6 cut(s)	149, 249, 945, 1513, 1645, 1768
EarI	CTCTTC	6 cut(s)	149, 249, 945, 1513, 1645, 1768
Eco130I	CCWWGG	3 cut(s)	393, 964, 1688
Eco24I	GRGCYC	1 cut(s)	168
Eco31I	GGTCTC	1 cut(s)	815
Eco32I	GATATC	1 cut(s)	610
Eco47I	GGWCC	3 cut(s)	69, 1180, 1779
Eco57I	CTGAAG	2 cut(s)	45, 273
Eco72I	CACGTG	1 cut(s)	794
Eco88I	CYCGRG	1 cut(s)	115
EcoO109I	RGGNCCY	3 cut(s)	164, 957, 1180
EcoRV	GATATC	1 cut(s)	610
EcoT14I	CCWWGG	3 cut(s)	393, 964, 1688
EcoT38I	GRGCYC	1 cut(s)	168
ErhI	CCWWGG	3 cut(s)	393, 964, 1688
FaeI	CATG	8 cut(s)	269, 364, 397, 589, 913, 1052, 1167, 1733
FaqI	GGGAC	2 cut(s)	82, 1792
FatI	CATG	8 cut(s)	265, 360, 393, 585, 909, 1048, 1163, 1729
FbaI	TGATCA	2 cut(s)	523, 700
Fnu4HI	GCNGC	7 cut(s)	112, 297, 761, 876, 1253, 1597, 1636
FokI	GGATG	3 cut(s)	257, 1325, 1418
FriOI	GRGCYC	1 cut(s)	168
Fsp4HI	GCNGC	7 cut(s)	112, 297, 761, 876, 1253, 1597, 1636
FspBI	CTAG	4 cut(s)	578, 641, 665, 1184
FspI	TGCGCA	1 cut(s)	635
GlaI	GCGC	2 cut(s)	635, 1790
GluI	GCNGC	7 cut(s)	112, 297, 761, 876, 1253, 1597, 1636
GsaI	CCCAGC	2 cut(s)	69, 629
GsuI	CTGGAG	2 cut(s)	702, 1373
HaeIII	GGCC	4 cut(s)	166, 193, 392, 959
HapII	CCGG	1 cut(s)	176
HgaI	GACGC	1 cut(s)	1088
HhaI	GCGC	2 cut(s)	636, 1791
Hin1I	GRCGYC	1 cut(s)	1099
Hin1II	CATG	8 cut(s)	269, 364, 397, 589, 913, 1052, 1167, 1733
Hin6I	GCGC	2 cut(s)	634, 1789
HinP1I	GCGC	2 cut(s)	634, 1789
HincII	GTYRAC	1 cut(s)	1618
HindII	GTYRAC	1 cut(s)	1618
HindIII	AAGCTT	1 cut(s)	6
HpaII	CCGG	1 cut(s)	176
HphI	GGTGA	1 cut(s)	365
Hpy166II	GTNNAC	2 cut(s)	1046, 1618
Hpy188I	TCNGA	8 cut(s)	133, 472, 607, 805, 864, 997, 1517, 1755
Hpy8I	GTNNAC	2 cut(s)	1046, 1618
Hpy99I	CGWCG	2 cut(s)	1104, 1635
HpyAV	CCTTC	7 cut(s)	253, 477, 1098, 1465, 1635, 1706, 1750
HpyCH4III	ACNGT	5 cut(s)	447, 754, 1073, 1115, 1708
HpyCH4IV	ACGT	1 cut(s)	793
HpyF10VI	GCNNNNNNNGC	6 cut(s)	172, 305, 722, 881, 1214, 1223
HpyF3I	CTNAG	4 cut(s)	33, 733, 812, 945
HpySE526I	ACGT	1 cut(s)	793
Hsp92I	GRCGYC	1 cut(s)	1099
Hsp92II	CATG	8 cut(s)	269, 364, 397, 589, 913, 1052, 1167, 1733
HspAI	GCGC	2 cut(s)	634, 1789
KroI	GCCGGC	1 cut(s)	175
KroNI	GCCGGC	1 cut(s)	177
Ksp22I	TGATCA	2 cut(s)	523, 700
Kzo9I	GATC	5 cut(s)	122, 523, 602, 700, 1747
LguI	GCTCTTC	1 cut(s)	1513
LmnI	GCTCC	2 cut(s)	721, 1151
Lsp1109I	GCAGC	5 cut(s)	123, 283, 862, 1264, 1608
LweI	GCATC	2 cut(s)	809, 847
MaeI	CTAG	4 cut(s)	578, 641, 665, 1184
MaeII	ACGT	1 cut(s)	793
MaeIII	GTNAC	5 cut(s)	75, 1109, 1115, 1441, 1480
MalI	GATC	5 cut(s)	124, 525, 604, 702, 1749
MboI	GATC	5 cut(s)	122, 523, 602, 700, 1747
MboII	GAAGA	9 cut(s)	28, 51, 166, 266, 368, 932, 1530, 1662, 1755
MhlI	GDGCHC	1 cut(s)	168
MluCI	AATT	7 cut(s)	209, 303, 341, 510, 536, 1001, 1663
MlyI	GAGTC	5 cut(s)	83, 107, 1576, 1662, 1754
MmeI	TCCRAC	1 cut(s)	1263
MroNI	GCCGGC	1 cut(s)	175
MroXI	GAANNNNTTC	2 cut(s)	939, 1522
MseI	TTAA	2 cut(s)	1368, 1556
MslI	CAYNNNNRTG	3 cut(s)	270, 392, 1773
MspA1I	CMGCKG	3 cut(s)	65, 760, 1803
MspI	CCGG	1 cut(s)	176
Mva1269I	GAATGC	1 cut(s)	857
MvnI	CGCG	2 cut(s)	1635, 1789
MwoI	GCNNNNNNNGC	6 cut(s)	172, 305, 722, 881, 1214, 1223
NaeI	GCCGGC	1 cut(s)	177
NcoI	CCATGG	1 cut(s)	393
NdeII	GATC	5 cut(s)	122, 523, 602, 700, 1747
NgoMIV	GCCGGC	1 cut(s)	175
NlaIII	CATG	8 cut(s)	269, 364, 397, 589, 913, 1052, 1167, 1733
NlaIV	GGNNCC	6 cut(s)	70, 166, 459, 1476, 1494, 1780
NmeAIII	GCCGAG	1 cut(s)	121
NmuCI	GTSAC	4 cut(s)	75, 1109, 1115, 1480
NsbI	TGCGCA	1 cut(s)	635
NspI	RCATGY	3 cut(s)	269, 364, 1052
PaeR7I	CTCGAG	1 cut(s)	115
PagI	TCATGA	1 cut(s)	585
PciI	ACATGT	3 cut(s)	265, 360, 1048
PciSI	GCTCTTC	1 cut(s)	1513
PcsI	WCGNNNNNNNCGW	1 cut(s)	122
PctI	GAATGC	1 cut(s)	857
PdiI	GCCGGC	1 cut(s)	177
PdmI	GAANNNNTTC	2 cut(s)	939, 1522
PfeI	GAWTC	6 cut(s)	86, 275, 619, 923, 1297, 1431
PflFI	GACNNNGTC	1 cut(s)	73
PkrI	GCNGC	7 cut(s)	113, 298, 762, 877, 1254, 1598, 1637
PleI	GAGTC	5 cut(s)	82, 106, 1576, 1661, 1754
PmaCI	CACGTG	1 cut(s)	794
PmlI	CACGTG	1 cut(s)	794
PpsI	GAGTC	5 cut(s)	82, 106, 1576, 1661, 1754
Ppu21I	YACGTR	1 cut(s)	794
PpuMI	RGGWCCY	1 cut(s)	1180
PscI	ACATGT	3 cut(s)	265, 360, 1048
Psp5II	RGGWCCY	1 cut(s)	1180
PspCI	CACGTG	1 cut(s)	794
PspFI	CCCAGC	2 cut(s)	65, 625
PspN4I	GGNNCC	6 cut(s)	70, 166, 459, 1476, 1494, 1780
PspOMI	GGGCCC	1 cut(s)	164
PspPI	GGNCC	6 cut(s)	69, 164, 165, 957, 1180, 1779
PspPPI	RGGWCCY	1 cut(s)	1180
PspXI	VCTCGAGB	1 cut(s)	115
PsrI	GAACNNNNNNTAC	2 cut(s)	112, 144
PstI	CTGCAG	1 cut(s)	1450
PstNI	CAGNNNCTG	2 cut(s)	371, 1445
PsyI	GACNNNGTC	1 cut(s)	73
PvuII	CAGCTG	1 cut(s)	65
RsaI	GTAC	2 cut(s)	789, 929
RsaNI	GTAC	2 cut(s)	788, 928
RseI	CAYNNNNRTG	3 cut(s)	270, 392, 1773
SapI	GCTCTTC	1 cut(s)	1513
SaqAI	TTAA	2 cut(s)	1368, 1556
SatI	GCNGC	7 cut(s)	112, 297, 761, 876, 1253, 1597, 1636
Sau3AI	GATC	5 cut(s)	122, 523, 602, 700, 1747
Sau96I	GGNCC	6 cut(s)	69, 164, 165, 957, 1180, 1779
SchI	GAGTC	5 cut(s)	83, 107, 1576, 1662, 1754
SduI	GDGCHC	1 cut(s)	168
SfaNI	GCATC	2 cut(s)	809, 847
SfcI	CTRYAG	1 cut(s)	1446
Sfr274I	CTCGAG	1 cut(s)	115
SinI	GGWCC	3 cut(s)	69, 1180, 1779
SlaI	CTCGAG	1 cut(s)	115
SmiMI	CAYNNNNRTG	3 cut(s)	270, 392, 1773
SmlI	CTYRAG	3 cut(s)	115, 1058, 1501
SmoI	CTYRAG	3 cut(s)	115, 1058, 1501
Sse9I	AATT	7 cut(s)	209, 303, 341, 510, 536, 1001, 1663
SsiI	CCGC	4 cut(s)	760, 1594, 1635, 1801
SspI	AATATT	1 cut(s)	1089
SspMI	CTAG	4 cut(s)	578, 641, 665, 1184
StyI	CCWWGG	3 cut(s)	393, 964, 1688
TaaI	ACNGT	5 cut(s)	447, 754, 1073, 1115, 1708
TaiI	ACGT	1 cut(s)	796
TaqI	TCGA	8 cut(s)	14, 101, 116, 125, 482, 1102, 1465, 1677
TaqII	GACCGA	2 cut(s)	86, 98
TasI	AATT	7 cut(s)	209, 303, 341, 510, 536, 1001, 1663
TauI	GCSGC	2 cut(s)	763, 1638
TfiI	GAWTC	6 cut(s)	86, 275, 619, 923, 1297, 1431
Tru1I	TTAA	2 cut(s)	1368, 1556
Tru9I	TTAA	2 cut(s)	1368, 1556
TscAI	CASTG	6 cut(s)	84, 97, 636, 820, 1048, 1459
TseFI	GTSAC	4 cut(s)	75, 1109, 1115, 1480
TseI	GCWGC	5 cut(s)	111, 296, 875, 1252, 1596
Tsp45I	GTSAC	4 cut(s)	75, 1109, 1115, 1480
TspDTI	ATGAA	4 cut(s)	261, 338, 632, 1233
TspGWI	ACGGA	2 cut(s)	698, 1500
TspRI	CASTG	6 cut(s)	84, 97, 636, 820, 1048, 1459
Tth111I	GACNNNGTC	1 cut(s)	73
VpaK11BI	GGWCC	3 cut(s)	69, 1180, 1779
XapI	RAATTY	1 cut(s)	1001
XceI	RCATGY	3 cut(s)	269, 364, 1052
XhoI	CTCGAG	1 cut(s)	115
XmnI	GAANNNNTTC	2 cut(s)	939, 1522
XspI	CTAG	4 cut(s)	578, 641, 665, 1184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.