No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13480 AT3G13480 |
| fragaria_vesca | FvH4_3g45780 |
| malus_domestica | MD03G1003200.v1.1 MD11G1003000.v1.1 |
| prunus_persica | Prupe.6G002800_v2.0.a1 Prupe.6G002800_v2.0.a1 |
| pyrus_communis | pycom03g00320 |
| rosa_chinensis | RchiOBHm_Chr5g0083851 |
| rosa_laevigata | RLG00000037058 |
| rosa_multiflora | Rmu_sc0001287.1_g000041 |
| rosa_roxburghii | Rroxscaffold_1G00000740 |
| rosa_rugosa | Rorug05G0486600 |
| rosa_samantha | Rh5AG539700 Rh5BG564800 Rh5CG586700 Rh5DG573300 |
| rosa_wichuraiana | Rw5G050180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 247, 368 |
| AcuI | CTGAAG | 2 cut(s) | 189, 267 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AgsI | TTSAA | 2 cut(s) | 162, 374 |
| AjnI | CCWGG | 1 cut(s) | 76 |
| AluBI | AGCT | 3 cut(s) | 219, 224, 242 |
| AluI | AGCT | 3 cut(s) | 219, 224, 242 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 290 |
| ApeKI | GCWGC | 2 cut(s) | 293, 423 |
| ApoI | RAATTY | 2 cut(s) | 247, 368 |
| AspS9I | GGNCC | 2 cut(s) | 80, 349 |
| AvaII | GGWCC | 2 cut(s) | 80, 349 |
| BbvI | GCAGC | 2 cut(s) | 280, 410 |
| BccI | CCATC | 1 cut(s) | 325 |
| BciT130I | CCWGG | 1 cut(s) | 78 |
| BclI | TGATCA | 1 cut(s) | 178 |
| BfaI | CTAG | 1 cut(s) | 92 |
| BisI | GCNGC | 2 cut(s) | 294, 424 |
| BlpI | GCTNAGC | 1 cut(s) | 220 |
| BlsI | GCNGC | 2 cut(s) | 295, 425 |
| Bme1390I | CCNGG | 1 cut(s) | 78 |
| Bme18I | GGWCC | 2 cut(s) | 80, 349 |
| BmgT120I | GGNCC | 2 cut(s) | 80, 349 |
| BmrFI | CCNGG | 1 cut(s) | 78 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 220 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 91, 121 |
| BseBI | CCWGG | 1 cut(s) | 78 |
| BseGI | GGATG | 1 cut(s) | 336 |
| BseMII | CTCAG | 3 cut(s) | 216, 234, 280 |
| BseXI | GCAGC | 2 cut(s) | 280, 410 |
| BsgI | GTGCAG | 1 cut(s) | 344 |
| BsiSI | CCGG | 1 cut(s) | 275 |
| BsmI | GAATGC | 1 cut(s) | 380 |
| Bsp143I | GATC | 3 cut(s) | 178, 204, 360 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 220 |
| BspCNI | CTCAG | 3 cut(s) | 217, 235, 279 |
| BssMI | GATC | 3 cut(s) | 178, 204, 360 |
| Bst2UI | CCWGG | 1 cut(s) | 78 |
| Bst6I | CTCTTC | 3 cut(s) | 207, 311, 412 |
| BstDEI | CTNAG | 4 cut(s) | 220, 225, 243, 266 |
| BstF5I | GGATG | 1 cut(s) | 336 |
| BstKTI | GATC | 3 cut(s) | 181, 207, 363 |
| BstMBI | GATC | 3 cut(s) | 178, 204, 360 |
| BstNI | CCWGG | 1 cut(s) | 78 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstSCI | CCNGG | 1 cut(s) | 76 |
| BstV1I | GCAGC | 2 cut(s) | 280, 410 |
| BtsCI | GGATG | 1 cut(s) | 336 |
| BtsI | GCAGTG | 2 cut(s) | 332, 385 |
| BtsIMutI | CAGTG | 3 cut(s) | 332, 385, 393 |
| CaiI | CAGNNNCTG | 1 cut(s) | 290 |
| Cfr13I | GGNCC | 2 cut(s) | 80, 349 |
| CviAII | CATG | 1 cut(s) | 149 |
| CviJI | RGCY | 7 cut(s) | 55, 173, 219, 224, 242, 274, 423 |
| CviKI_1 | RGCY | 7 cut(s) | 55, 173, 219, 224, 242, 274, 423 |
| DdeI | CTNAG | 4 cut(s) | 220, 225, 243, 266 |
| DpnI | GATC | 3 cut(s) | 180, 206, 362 |
| DpnII | GATC | 3 cut(s) | 178, 204, 360 |
| Eam1104I | CTCTTC | 3 cut(s) | 207, 311, 412 |
| EarI | CTCTTC | 3 cut(s) | 207, 311, 412 |
| Eco47I | GGWCC | 2 cut(s) | 80, 349 |
| Eco57I | CTGAAG | 2 cut(s) | 189, 267 |
| EcoO109I | RGGNCCY | 1 cut(s) | 349 |
| EcoRI | GAATTC | 1 cut(s) | 247 |
| EcoRII | CCWGG | 1 cut(s) | 76 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 6 cut(s) | 11, 66, 68, 70, 150, 442 |
| FatI | CATG | 1 cut(s) | 148 |
| FbaI | TGATCA | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 2 cut(s) | 294, 424 |
| FokI | GGATG | 1 cut(s) | 343 |
| Fsp4HI | GCNGC | 2 cut(s) | 294, 424 |
| FspBI | CTAG | 1 cut(s) | 92 |
| GluI | GCNGC | 2 cut(s) | 294, 424 |
| HapII | CCGG | 1 cut(s) | 275 |
| Hin1II | CATG | 1 cut(s) | 152 |
| HinfI | GANTC | 3 cut(s) | 22, 229, 278 |
| HpaII | CCGG | 1 cut(s) | 275 |
| Hpy188I | TCNGA | 4 cut(s) | 178, 255, 269, 286 |
| HpyAV | CCTTC | 3 cut(s) | 66, 165, 340 |
| HpyCH4V | TGCA | 4 cut(s) | 18, 325, 378, 426 |
| HpyF3I | CTNAG | 4 cut(s) | 220, 225, 243, 266 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| Ksp22I | TGATCA | 1 cut(s) | 178 |
| Kzo9I | GATC | 3 cut(s) | 178, 204, 360 |
| LmnI | GCTCC | 1 cut(s) | 301 |
| LpnPI | CCDG | 7 cut(s) | 63, 90, 180, 252, 288, 303, 349 |
| Lsp1109I | GCAGC | 2 cut(s) | 280, 410 |
| MaeI | CTAG | 1 cut(s) | 92 |
| MaeIII | GTNAC | 1 cut(s) | 183 |
| MalI | GATC | 3 cut(s) | 180, 206, 362 |
| MboI | GATC | 3 cut(s) | 178, 204, 360 |
| MboII | GAAGA | 6 cut(s) | 150, 224, 273, 325, 328, 429 |
| MluCI | AATT | 3 cut(s) | 247, 368, 383 |
| MnlI | CCTC | 5 cut(s) | 42, 72, 117, 184, 413 |
| MspA1I | CMGCKG | 1 cut(s) | 242 |
| MspI | CCGG | 1 cut(s) | 275 |
| MspR9I | CCNGG | 1 cut(s) | 78 |
| Mva1269I | GAATGC | 1 cut(s) | 380 |
| MvaI | CCWGG | 1 cut(s) | 78 |
| NdeII | GATC | 3 cut(s) | 178, 204, 360 |
| NlaIII | CATG | 1 cut(s) | 152 |
| NspI | RCATGY | 1 cut(s) | 152 |
| PciI | ACATGT | 1 cut(s) | 148 |
| PctI | GAATGC | 1 cut(s) | 380 |
| PfeI | GAWTC | 3 cut(s) | 22, 229, 278 |
| PfoI | TCCNGGA | 1 cut(s) | 76 |
| PkrI | GCNGC | 2 cut(s) | 295, 425 |
| PpuMI | RGGWCCY | 1 cut(s) | 349 |
| PscI | ACATGT | 1 cut(s) | 148 |
| Psp5II | RGGWCCY | 1 cut(s) | 349 |
| Psp6I | CCWGG | 1 cut(s) | 76 |
| PspGI | CCWGG | 1 cut(s) | 76 |
| PspPI | GGNCC | 2 cut(s) | 80, 349 |
| PspPPI | RGGWCCY | 1 cut(s) | 349 |
| PstNI | CAGNNNCTG | 1 cut(s) | 290 |
| PvuII | CAGCTG | 1 cut(s) | 242 |
| SatI | GCNGC | 2 cut(s) | 294, 424 |
| Sau3AI | GATC | 3 cut(s) | 178, 204, 360 |
| Sau96I | GGNCC | 2 cut(s) | 80, 349 |
| ScrFI | CCNGG | 1 cut(s) | 78 |
| SetI | ASST | 8 cut(s) | 8, 109, 169, 190, 221, 226, 244, 354 |
| SinI | GGWCC | 2 cut(s) | 80, 349 |
| Sse9I | AATT | 3 cut(s) | 247, 368, 383 |
| SspMI | CTAG | 1 cut(s) | 92 |
| StyD4I | CCNGG | 1 cut(s) | 76 |
| TasI | AATT | 3 cut(s) | 247, 368, 383 |
| TfiI | GAWTC | 3 cut(s) | 22, 229, 278 |
| TscAI | CASTG | 3 cut(s) | 332, 385, 400 |
| TseI | GCWGC | 2 cut(s) | 293, 423 |
| TspDTI | ATGAA | 2 cut(s) | 14, 326 |
| TspRI | CASTG | 3 cut(s) | 332, 385, 400 |
| VpaK11BI | GGWCC | 2 cut(s) | 80, 349 |
| XapI | RAATTY | 2 cut(s) | 247, 368 |
| XceI | RCATGY | 1 cut(s) | 152 |
| XspI | CTAG | 1 cut(s) | 92 |