Rroxscaffold_1G00028660

SPRY domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0011366
Physical Location & Seq
Forward (+)
36573503 .. 36576305
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00028660.1

Sequence Viewer

Length: 1311 bp
ATGGACAATCTCCAATCCAATTACATGGACGAAGACGAGGAAGAAGACGAACAATCCAAAACCGCCGCCGCCGTCGCAATGACCGAGCTCGTTGAGCCCGCGACGACAACGGAGCCCGCAAACGACGACGACGACGACGACGAGCCCAATACGGAGCCCATTAACCCACCACCGACCGACCCGCTCAACGGCAACAAAACCGAGACCGAAGCCTCCGAAGATCTCTCCGAGTCCGTCAAATCCCTCGAAAACGACGTCGACGTCGACATCGAAGACGAAGACCCGCATCCCAAGAAGCAAAAGCAGCTCTCTTCTCTCACCGCCATTGCCTCCGCCGCCGCCGAGACTACCCCACCTGCTTCTTCGGACCCGGACCAGGCCCAATTGCCCCAACCCGCACCCGAAACCAACGGCAACGGCAACGGCGCTCTCCTCCTCCCGGCGCAACCCTCCAAGAAGTCCACCAAGAAGAAGAACAACAATGTGAAGAAGAAGACCAAGCCCAGCACCAACAACAATGCCCCCGGAGAGGACAAGGTTCTCGTCACTCCGGTCACCAGATTCCCCGACAAAACCGACGACACGCCGGAGATGACTATCTGCCTCTCCAAGGTCTACAAGGCCGAGAAAGTAGAGGTCAGCGAGGACCGAATGAGTGCCGGGAGTACTAAAGGGTATAGAATGGTTAGGGCCACCAGGGGAGTTGTGGAAGGTGCTTGGTACTTTGAAATTAGGGTAGTCAGCTTGGGAGAGACCGGCCACACCCGCCTCGGCTGGTCCACTGACAAAGGTGACCTTCAGGCTCCGGTTGGATATGATGGGAATAGTTTTGGGTATCGGGACATTGATGGGAGTAAGGTGCATAAGGCTTTGAGGGAGAAGTATGGGGACGAAGGGTATAAGGAAGGTGATGTTATAGGGTTTTATATAAATTTGCCGGATGGGGGGTCTTATGCCCCCAAACCTCCGCATTTGGTTTGGTATAAGGGGCAGAGGTATGCTACCGCACCCGAAGCCAAGGAGGATGCTGTCAAAGTAGTGCCTGGAAGTGAGATATCTTTTTTCAAAAATGGGGTATGCCAAGGTGTTGCTTTTAAAGATCTATATGGTGGTCGTTACTATCCTGCTGCTTCAATGTATACTCTTCCCCATCAACCAAATTGTGTGGTCAAGTTCAACTTTGGTCCTGACTTTGAATTCTTTCCAGAAGACTTCAATGAACGTCCAGTGCCCAGGCCCATGGTTGAAGTTCCTTATCATGGGTTTGAAAACCGTGCTGAAAATGGAGTGTCCAATGAGAAGAACAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0002376 GO:0002520 GO:0002682 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008284 GO:0008757 GO:0009058 GO:0009059 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018024 GO:0018130 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0022607 GO:0030097 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0034708 GO:0034968 GO:0035097 GO:0036211 GO:0042054 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043627 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045595 GO:0045637 GO:0045652 GO:0046483 GO:0048188 GO:0048316 GO:0048366 GO:0048367 GO:0048513 GO:0048518 GO:0048522 GO:0048534 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0051568 GO:0051716 GO:0060255 GO:0060776 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0080182 GO:0090304 GO:0097159 GO:0097659 GO:0099402 GO:0140096 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1903506 GO:1903706 GO:1904837 GO:1905392 GO:1990234 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04212 ko04934 map04212 map04934
Pfam Domains
Protein Families
SPRY

Protein Analysis

436

Amino Acids

47.89

Weight (kDa)

4.66

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPRY PF00622 240 - 315 2.9e-09 SPRY domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011366)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G51450
fragaria_vesca FvH4_3g28490 FvH4_3g28490 FvH4_3g28490
malus_domestica MD03G1172400.v1.1 MD11G1190300.v1.1
prunus_persica Prupe.4G254200_v2.0.a1
pyrus_communis pycom03g12960 pycom11g16680
rosa_chinensis RchiOBHm_Chr5g0052831
rosa_laevigata RLG00000034789
rosa_multiflora Rmu_ssc0000311.1_g000014
rosa_roxburghii Rroxscaffold_1G00028660
rosa_rugosa Rorug05G0269300 Rorug05G0269400
rosa_samantha Rh5AG341400 Rh5BG352100 Rh5CG378800 Rh5DG368400
rosa_wichuraiana Rw5G032190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 364
AasI GACNNNNNNGTC 1 cut(s) 260
AatII GACGTC 2 cut(s) 258, 264
Acc36I ACCTGC 1 cut(s) 364
AccBSI CCGCTC 1 cut(s) 184
AccI GTMKAC 4 cut(s) 258, 264, 615, 1139
AccII CGCG 1 cut(s) 101
AcoI YGGCCR 1 cut(s) 757
AcsI RAATTY 2 cut(s) 931, 1196
AcuI CTGAAG 1 cut(s) 782
AcyI GRCGYC 2 cut(s) 255, 261
AfaI GTAC 2 cut(s) 667, 722
AfiI CCNNNNNNNGG 7 cut(s) 188, 376, 439, 529, 610, 944, 1259
AgsI TTSAA 8 cut(s) 728, 1066, 1134, 1177, 1196, 1216, 1247, 1268
AjnI CCWGG 4 cut(s) 375, 695, 1042, 1232
AluBI AGCT 3 cut(s) 88, 307, 744
AluI AGCT 3 cut(s) 88, 307, 744
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 3 cut(s) 197, 338, 746
AoxI GGCC 5 cut(s) 378, 621, 690, 757, 1235
ApeKI GCWGC 2 cut(s) 304, 1127
ApoI RAATTY 2 cut(s) 931, 1196
ArsI GACNNNNNNTTYG 2 cut(s) 240, 272
Asp700I GAANNNNTTC 1 cut(s) 1200
AspLEI GCGC 2 cut(s) 428, 445
AspS9I GGNCC 8 cut(s) 367, 373, 379, 646, 690, 777, 1184, 1236
AsuC2I CCSGG 4 cut(s) 371, 440, 525, 661
AsuHPI GGTGA 4 cut(s) 310, 547, 803, 920
AvaII GGWCC 5 cut(s) 367, 373, 646, 777, 1184
BaeGI GKGCMC 1 cut(s) 1233
BanII GRGCYC 5 cut(s) 90, 99, 117, 147, 159
BbsI GAAGAC 6 cut(s) 39, 51, 279, 285, 500, 1215
Bbv12I GWGCWC 1 cut(s) 90
BbvI GCAGC 2 cut(s) 316, 1114
BccI CCATC 4 cut(s) 812, 842, 935, 1158
BceAI ACGGC 5 cut(s) 56, 205, 427, 433, 439
BciT130I CCWGG 4 cut(s) 377, 697, 1044, 1234
BcnI CCSGG 4 cut(s) 371, 440, 525, 661
BcoDI GTCTC 3 cut(s) 197, 338, 746
BfoI RGCGCY 1 cut(s) 429
BfuAI ACCTGC 1 cut(s) 364
BglII AGATCT 2 cut(s) 220, 1099
BisI GCNGC 6 cut(s) 66, 69, 305, 336, 339, 1128
BlsI GCNGC 6 cut(s) 67, 70, 306, 337, 340, 1129
BmcAI AGTACT 1 cut(s) 667
Bme1390I CCNGG 8 cut(s) 371, 377, 440, 525, 661, 697, 1044, 1234
Bme18I GGWCC 5 cut(s) 367, 373, 646, 777, 1184
BmgT120I GGNCC 8 cut(s) 367, 373, 379, 646, 690, 777, 1184, 1236
BmiI GGNNCC 4 cut(s) 114, 156, 369, 804
BmrFI CCNGG 8 cut(s) 371, 377, 440, 525, 661, 697, 1044, 1234
BmsI GCATC 2 cut(s) 295, 1015
BpiI GAAGAC 6 cut(s) 39, 51, 279, 285, 500, 1215
BpuMI CCSGG 4 cut(s) 371, 440, 525, 661
BsaBI GATNNNNATC 1 cut(s) 596
BsaHI GRCGYC 2 cut(s) 255, 261
BsaI GGTCTC 2 cut(s) 197, 746
BsaJI CCNNGG 8 cut(s) 523, 609, 696, 769, 1017, 1081, 1232, 1239
BsaWI WCCGGW 2 cut(s) 550, 805
Bsc4I CCNNNNNNNGG 7 cut(s) 188, 376, 439, 529, 610, 944, 1259
Bse118I RCCGGY 1 cut(s) 755
Bse1I ACTGG 1 cut(s) 1226
Bse3DI GCAATG 2 cut(s) 84, 324
Bse8I GATNNNNATC 1 cut(s) 596
BseBI CCWGG 4 cut(s) 377, 697, 1044, 1234
BseDI CCNNGG 8 cut(s) 523, 609, 696, 769, 1017, 1081, 1232, 1239
BseGI GGATG 3 cut(s) 286, 946, 1030
BseJI GATNNNNATC 1 cut(s) 596
BseLI CCNNNNNNNGG 7 cut(s) 188, 376, 439, 529, 610, 944, 1259
BseMI GCAATG 2 cut(s) 84, 324
BseNI ACTGG 1 cut(s) 1226
BseRI GAGGAG 2 cut(s) 422, 425
BseSI GKGCMC 1 cut(s) 1233
BseXI GCAGC 2 cut(s) 316, 1114
BseYI CCCAGC 1 cut(s) 503
Bsh1236I CGCG 1 cut(s) 101
Bsh1285I CGRYCG 1 cut(s) 177
BshFI GGCC 5 cut(s) 380, 623, 692, 759, 1237
BsiEI CGRYCG 1 cut(s) 177
BsiHKAI GWGCWC 1 cut(s) 90
BsiSI CCGG 9 cut(s) 371, 440, 525, 551, 587, 660, 756, 806, 938
BslFI GGGAC 2 cut(s) 854, 902
BslI CCNNNNNNNGG 7 cut(s) 188, 376, 439, 529, 610, 944, 1259
BsmAI GTCTC 3 cut(s) 197, 338, 746
BsmFI GGGAC 2 cut(s) 854, 902
BsnI GGCC 5 cut(s) 380, 623, 692, 759, 1237
Bso31I GGTCTC 2 cut(s) 197, 746
Bsp1286I GDGCHC 6 cut(s) 90, 99, 117, 147, 159, 1233
Bsp143I GATC 2 cut(s) 220, 1099
Bsp19I CCATGG 1 cut(s) 1239
BspANI GGCC 5 cut(s) 380, 623, 692, 759, 1237
BspFNI CGCG 1 cut(s) 101
BspLI GGNNCC 4 cut(s) 114, 156, 369, 804
BspMI ACCTGC 1 cut(s) 364
BspTNI GGTCTC 2 cut(s) 197, 746
BsrBI CCGCTC 1 cut(s) 184
BsrDI GCAATG 2 cut(s) 84, 324
BsrFI RCCGGY 1 cut(s) 755
BsrI ACTGG 1 cut(s) 1226
BssAI RCCGGY 1 cut(s) 755
BssECI CCNNGG 8 cut(s) 523, 609, 696, 769, 1017, 1081, 1232, 1239
BssMI GATC 2 cut(s) 220, 1099
BssNAI GTATAC 1 cut(s) 1140
BssNI GRCGYC 2 cut(s) 255, 261
BssT1I CCWWGG 4 cut(s) 609, 1017, 1081, 1239
Bst1107I GTATAC 1 cut(s) 1140
Bst2UI CCWGG 4 cut(s) 377, 697, 1044, 1234
Bst4CI ACNGT 1 cut(s) 1274
Bst6I CTCTTC 2 cut(s) 316, 1149
BstACI GRCGYC 2 cut(s) 255, 261
BstC8I GCNNGC 2 cut(s) 99, 117
BstDSI CCRYGG 1 cut(s) 1239
BstEII GGTNACC 2 cut(s) 553, 791
BstENI CCTNNNNNAGG 1 cut(s) 608
BstF5I GGATG 3 cut(s) 286, 946, 1030
BstFNI CGCG 1 cut(s) 101
BstH2I RGCGCY 1 cut(s) 429
BstHHI GCGC 2 cut(s) 428, 445
BstKTI GATC 2 cut(s) 223, 1102
BstMAI GTCTC 3 cut(s) 197, 338, 746
BstMBI GATC 2 cut(s) 220, 1099
BstMCI CGRYCG 1 cut(s) 177
BstMWI GCNNNNNNNGC 6 cut(s) 74, 94, 304, 335, 765, 1013
BstNI CCWGG 4 cut(s) 377, 697, 1044, 1234
BstPI GGTNACC 2 cut(s) 553, 791
BstSCI CCNGG 8 cut(s) 369, 375, 438, 523, 659, 695, 1042, 1232
BstSLI GKGCMC 1 cut(s) 1233
BstUI CGCG 1 cut(s) 101
BstV1I GCAGC 2 cut(s) 316, 1114
BstV2I GAAGAC 6 cut(s) 39, 51, 279, 285, 500, 1215
BstX2I RGATCY 2 cut(s) 220, 1099
BstXI CCANNNNNNTGG 2 cut(s) 25, 1240
BstYI RGATCY 2 cut(s) 220, 1099
BstZ17I GTATAC 1 cut(s) 1140
BsuRI GGCC 5 cut(s) 380, 623, 692, 759, 1237
BtgI CCRYGG 1 cut(s) 1239
BtsCI GGATG 3 cut(s) 286, 946, 1030
BtsIMutI CAGTG 2 cut(s) 780, 1233
BveI ACCTGC 1 cut(s) 364
Cac8I GCNNGC 2 cut(s) 99, 117
CfoI GCGC 2 cut(s) 428, 445
Cfr10I RCCGGY 1 cut(s) 755
Cfr13I GGNCC 8 cut(s) 367, 373, 379, 646, 690, 777, 1184, 1236
Csp6I GTAC 2 cut(s) 666, 721
CspCI CAANNNNNGTGG 2 cut(s) 1146, 1181
CviAII CATG 3 cut(s) 25, 1240, 1259
CviQI GTAC 2 cut(s) 666, 721
DpnI GATC 2 cut(s) 222, 1101
DpnII GATC 2 cut(s) 220, 1099
DraI TTTAAA 1 cut(s) 1096
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 1 cut(s) 757
Eam1104I CTCTTC 2 cut(s) 316, 1149
EarI CTCTTC 2 cut(s) 316, 1149
EciI GGCGGA 1 cut(s) 322
Ecl136II GAGCTC 1 cut(s) 88
Eco130I CCWWGG 4 cut(s) 609, 1017, 1081, 1239
Eco24I GRGCYC 5 cut(s) 90, 99, 117, 147, 159
Eco31I GGTCTC 2 cut(s) 197, 746
Eco32I GATATC 1 cut(s) 1056
Eco47I GGWCC 5 cut(s) 367, 373, 646, 777, 1184
Eco53kI GAGCTC 1 cut(s) 88
Eco57I CTGAAG 1 cut(s) 782
Eco91I GGTNACC 2 cut(s) 553, 791
EcoICRI GAGCTC 1 cut(s) 88
EcoNI CCTNNNNNAGG 1 cut(s) 608
EcoO65I GGTNACC 2 cut(s) 553, 791
EcoRI GAATTC 1 cut(s) 1196
EcoRII CCWGG 4 cut(s) 375, 695, 1042, 1232
EcoRV GATATC 1 cut(s) 1056
EcoT14I CCWWGG 4 cut(s) 609, 1017, 1081, 1239
EcoT38I GRGCYC 5 cut(s) 90, 99, 117, 147, 159
ErhI CCWWGG 4 cut(s) 609, 1017, 1081, 1239
FaeI CATG 3 cut(s) 28, 1243, 1262
FalI AAGNNNNNCTT 4 cut(s) 780, 812, 1163, 1195
FaqI GGGAC 2 cut(s) 854, 902
FatI CATG 3 cut(s) 24, 1239, 1258
FauI CCCGC 6 cut(s) 106, 124, 189, 291, 403, 773
FblI GTMKAC 4 cut(s) 258, 264, 615, 1139
Fnu4HI GCNGC 6 cut(s) 66, 69, 305, 336, 339, 1128
FokI GGATG 3 cut(s) 273, 953, 1037
FriOI GRGCYC 5 cut(s) 90, 99, 117, 147, 159
Fsp4HI GCNGC 6 cut(s) 66, 69, 305, 336, 339, 1128
GlaI GCGC 2 cut(s) 427, 444
GluI GCNGC 6 cut(s) 66, 69, 305, 336, 339, 1128
GsaI CCCAGC 1 cut(s) 507
HaeII RGCGCY 1 cut(s) 429
HaeIII GGCC 5 cut(s) 380, 623, 692, 759, 1237
HapII CCGG 9 cut(s) 371, 440, 525, 551, 587, 660, 756, 806, 938
HhaI GCGC 2 cut(s) 428, 445
Hin1I GRCGYC 2 cut(s) 255, 261
Hin1II CATG 3 cut(s) 28, 1243, 1262
Hin6I GCGC 2 cut(s) 426, 443
HinP1I GCGC 2 cut(s) 426, 443
HincII GTYRAC 2 cut(s) 259, 265
HindII GTYRAC 2 cut(s) 259, 265
HinfI GANTC 2 cut(s) 230, 561
HpaII CCGG 9 cut(s) 371, 440, 525, 551, 587, 660, 756, 806, 938
HphI GGTGA 4 cut(s) 310, 547, 803, 920
Hpy166II GTNNAC 6 cut(s) 259, 265, 462, 616, 780, 1140
Hpy188I TCNGA 3 cut(s) 217, 229, 367
Hpy188III TCNNGA 3 cut(s) 839, 1187, 1205
Hpy8I GTNNAC 6 cut(s) 259, 265, 462, 616, 780, 1140
HpyAV CCTTC 4 cut(s) 704, 806, 887, 899
HpyCH4III ACNGT 1 cut(s) 1274
HpyCH4IV ACGT 3 cut(s) 255, 261, 1222
HpyCH4V TGCA 1 cut(s) 862
HpyF10VI GCNNNNNNNGC 6 cut(s) 74, 94, 304, 335, 765, 1013
HpySE526I ACGT 3 cut(s) 255, 261, 1222
Hsp92I GRCGYC 2 cut(s) 255, 261
Hsp92II CATG 3 cut(s) 28, 1243, 1262
HspAI GCGC 2 cut(s) 426, 443
Kzo9I GATC 2 cut(s) 220, 1099
LmnI GCTCC 3 cut(s) 112, 154, 808
Lsp1109I GCAGC 2 cut(s) 316, 1114
LweI GCATC 2 cut(s) 295, 1015
MaeII ACGT 3 cut(s) 255, 261, 1222
MaeIII GTNAC 4 cut(s) 544, 553, 791, 1115
MalI GATC 2 cut(s) 222, 1101
MbiI CCGCTC 1 cut(s) 184
MboI GATC 2 cut(s) 220, 1099
MfeI CAATTG 1 cut(s) 383
MflI RGATCY 2 cut(s) 220, 1099
MhlI GDGCHC 6 cut(s) 90, 99, 117, 147, 159, 1233
MluCI AATT 7 cut(s) 19, 383, 729, 931, 1159, 1196, 1306
MlyI GAGTC 1 cut(s) 239
MmeI TCCRAC 1 cut(s) 790
MroXI GAANNNNTTC 1 cut(s) 1200
MseI TTAA 2 cut(s) 162, 1095
MspI CCGG 9 cut(s) 371, 440, 525, 551, 587, 660, 756, 806, 938
MspR9I CCNGG 8 cut(s) 371, 377, 440, 525, 661, 697, 1044, 1234
MunI CAATTG 1 cut(s) 383
MvaI CCWGG 4 cut(s) 377, 697, 1044, 1234
MvnI CGCG 1 cut(s) 101
MwoI GCNNNNNNNGC 6 cut(s) 74, 94, 304, 335, 765, 1013
NciI CCSGG 4 cut(s) 371, 440, 525, 661
NcoI CCATGG 1 cut(s) 1239
NdeII GATC 2 cut(s) 220, 1099
NlaIII CATG 3 cut(s) 28, 1243, 1262
NlaIV GGNNCC 4 cut(s) 114, 156, 369, 804
NmeAIII GCCGAG 3 cut(s) 367, 649, 750
NmuCI GTSAC 3 cut(s) 544, 553, 791
PaqCI CACCTGC 1 cut(s) 364
PcsI WCGNNNNNNNCGW 9 cut(s) 81, 129, 132, 135, 138, 252, 258, 261, 267
PdmI GAANNNNTTC 1 cut(s) 1200
PfeI GAWTC 1 cut(s) 561
PkrI GCNGC 6 cut(s) 67, 70, 306, 337, 340, 1129
PleI GAGTC 1 cut(s) 238
PpsI GAGTC 1 cut(s) 238
Psp124BI GAGCTC 1 cut(s) 90
Psp6I CCWGG 4 cut(s) 375, 695, 1042, 1232
PspEI GGTNACC 2 cut(s) 553, 791
PspFI CCCAGC 1 cut(s) 503
PspGI CCWGG 4 cut(s) 375, 695, 1042, 1232
PspN4I GGNNCC 4 cut(s) 114, 156, 369, 804
PspPI GGNCC 8 cut(s) 367, 373, 379, 646, 690, 777, 1184, 1236
PsuI RGATCY 2 cut(s) 220, 1099
RsaI GTAC 2 cut(s) 667, 722
RsaNI GTAC 2 cut(s) 666, 721
SacI GAGCTC 1 cut(s) 90
SalI GTCGAC 2 cut(s) 257, 263
SaqAI TTAA 2 cut(s) 162, 1095
SatI GCNGC 6 cut(s) 66, 69, 305, 336, 339, 1128
Sau3AI GATC 2 cut(s) 220, 1099
Sau96I GGNCC 8 cut(s) 367, 373, 379, 646, 690, 777, 1184, 1236
ScaI AGTACT 1 cut(s) 667
SchI GAGTC 1 cut(s) 239
ScrFI CCNGG 8 cut(s) 371, 377, 440, 525, 661, 697, 1044, 1234
SduI GDGCHC 6 cut(s) 90, 99, 117, 147, 159, 1233
SfaNI GCATC 2 cut(s) 295, 1015
SgrDI CGTCGACG 1 cut(s) 257
SinI GGWCC 5 cut(s) 367, 373, 646, 777, 1184
Sse9I AATT 7 cut(s) 19, 383, 729, 931, 1159, 1196, 1306
SstI GAGCTC 1 cut(s) 90
StyD4I CCNGG 8 cut(s) 369, 375, 438, 523, 659, 695, 1042, 1232
StyI CCWWGG 4 cut(s) 609, 1017, 1081, 1239
TaaI ACNGT 1 cut(s) 1274
TaiI ACGT 3 cut(s) 258, 264, 1225
TaqI TCGA 4 cut(s) 246, 258, 264, 270
TaqII GACCGA 4 cut(s) 98, 191, 221, 663
TasI AATT 7 cut(s) 19, 383, 729, 931, 1159, 1196, 1306
TatI WGTACW 1 cut(s) 665
TauI GCSGC 4 cut(s) 68, 71, 338, 341
TfiI GAWTC 1 cut(s) 561
Tru1I TTAA 2 cut(s) 162, 1095
Tru9I TTAA 2 cut(s) 162, 1095
TscAI CASTG 2 cut(s) 787, 1233
TseFI GTSAC 3 cut(s) 544, 553, 791
TseI GCWGC 2 cut(s) 304, 1127
Tsp45I GTSAC 3 cut(s) 544, 553, 791
TspDTI ATGAA 1 cut(s) 1233
TspGWI ACGGA 3 cut(s) 125, 167, 223
TspRI CASTG 2 cut(s) 787, 1233
VpaK11BI GGWCC 5 cut(s) 367, 373, 646, 777, 1184
XagI CCTNNNNNAGG 1 cut(s) 608
XapI RAATTY 2 cut(s) 931, 1196
XcmI CCANNNNNNNNNTGG 1 cut(s) 703
XmiI GTMKAC 4 cut(s) 258, 264, 615, 1139
XmnI GAANNNNTTC 1 cut(s) 1200
ZraI GACGTC 2 cut(s) 256, 262
ZrmI AGTACT 1 cut(s) 667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.